CmUC11G211140 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGTCTGGGACATTCCCTCATGATGGAACGGCTACCTTCTTTGTGTTGTCTACTCAAGGAAAGAGCGGGATACTTAGCTGAAAGGGTGAACAAGGTCGAGCGCGTTCAAACGTTGCTCCAGAGTACCCTCTTGGGCAGCAGTCGAAGAAAAGAGCAAAGTTCAGGCAAGAAAAAAAGAATGAAATACGAATGGATTGCATTCGAAAATCAGTATACCAGTAACAATTCTAAAGAAAGCCTGAACTGGCCTCCCGAAAGTTGTCTCAAGAGAGTCCTTTACGGCCCTCTCATACATAGCCATCTCTTCCTCGGATCAGAGAAGGAAGGGTTCCTCTACAAACCATTCAAGCTAAAATTGATTATTGTTGCTATCCAGTTCGAACTATCTATGGGGTATTAGGTATAAAAATTTGGATATTTGTAGACGAACAATAATAAGCCCTTCCGAGGAGATGAAGGTGATTCTTGTTCCAGTGAATACAACCTATTCTTTGTGACTGCTCTGCGGGCTTGACTTCCATAGTCTAAAAGGCTTGCTCCTTCCTAACCTAAAAAGAGTGTTTATCTCACTTCTTAGGCCAGTTGAACCCGCCGGTAAATGAAAGTATCGTTCTCGTCTCCATTCTTCGTCACATTGTTGGAACAAAAATTGAATATGTATCAATATGGAAATATTTGGCACATGGAGCCGTGATCTGATATATAATCTATCTTTTTTATAGAGATAGAAAATATCTTATATAGATAGAAATTGATCTTATCCCAACAACAGCAGGTCTCAGCTCTGCACATTCCTAGAAATTTGTTCTTTCTTTCAGCTAAAGATTGTTATCATCTGGTATGAGAGTCCAGGTTATGCAGATATGGTAGCGATACAATCTTCTGGATCTATAGTTGCTGATATGATTACAGCATTAACGGAAGAAGATTGTCATAAGATGCTTCTACGCATCAGACTAACTAGAGTTCATGCTTTCCTGCGTGAGACAAAGGAAGCCAATTTTCTTACTCGGCGGGAAGGTAAATGTTGGACTTTTTCTCCCTCTCAAAAGAAGGTTTATTTCAGCTATATATAGAAAAATAACAATCACATTCGGCAAAGCCTCACATCCTGTTCCTGTTGTGTTGCCTTAGACCAGGGAAGATTAGTTTCTGGTGGAAAACAAAGCTATTGATCTAGTTGAGACAGCTCAACATGGCAAAAACTCGTGCTCGAAAATAAATATACATATATATATTTTTTTATTTCATTTTCGAACATGGGTTTTTTTAGTCCAAGTGTATCTTGTTTTTACTACGAATTATTTTCCTTGGTTAACAACAGTTGTAGTTTTTCCAATATTTGCGGGTTTATTACTTTTCTTTTTCCCTCATAGAGGAAATAAAGTAATGAGCAGTTCGGGCCAAATCCTGAAGAAAGCTAAAAAGCGCTGTTTGATGAGCCTGCGTAGTATTAGGTCGTTGGTCAGGTAAAGGCTGACCAAGCCAATAATGCTTAGCTGGTCTTTTCGGATGATCAGCCACACTGGGACTGAGACACGGCCCGGACTCTCTGTGAAACTCCTCCTTGTTCTATGATTGATCTGACCATTTTCTTTAGGCGGAAGCTGAAAAGAGACTTGAACAGCAGTCTGAAAAGACTAATGCTGCGCAAAAGAATATGTTTCTAAAAAAGAATAAGCACAAAGTGAGTGCAGAAGGACCTGAAAAACATAGATTGTCGGAACCAGAAGTCAAAATTTTGGTAGATAGGGATCCCGTAAAAACTTCTTTCGAGGAATGGGCCAGACCGGGTCATTTCTCGAGAACAATAGCTAAGGGTCCTGATACTACCACTTGGATCTGGAACCTTCATGCTGATGCTCACGATTTCGATAGCCATACTAGTGATTTGGAGGAGATCTCTCGAAAAGTATTTAGTGCCCATTTCGGCCAACTCTCCATCATCTTTCTTTGGCTGAGTGGGATGTATTTCCACGGTCCTCCTTGCGGTTAA ATGGAGAGTCTGGGACATTCCCTCATGATGGAACGGCTACCTTCTTTGTGTTGTCTACTCAAGGAAAGAGCGGGATACTTAGCTGAAAGGGTGAACAAGGTCGAGCGCGTTCAAACGTTGCTCCAGAGTACCCTCTTGGGCAGCAGTCGAAGAAAAGAGCAAAGTTCAGGCAAGAAAAAAAGAATGAAATACGAATGGATTGCATTCGAAAATCAGTATACCAGTAACAATTCTAAAGAAAGCCTGAACTGGCCTCCCGAAAGTTGTCTCAAGAGAGTCCTTTACGGCCCTCTCATACATAGCCATCTCTTCCTCGGATCAGAGAAGGAAGGGTTCCTCTACAAACCATTCAAGCTAAAATTGATTATTGTTGCTATCCAGTTCGAACTATCTATGGGACCGGGTCATTTCTCGAGAACAATAGCTAAGGGTCCTGATACTACCACTTGGATCTGGAACCTTCATGCTGATGCTCACGATTTCGATAGCCATACTAGTGATTTGGAGGAGATCTCTCGAAAAGTATTTAGTGCCCATTTCGGCCAACTCTCCATCATCTTTCTTTGGCTGAGTGGGATGTATTTCCACGGTCCTCCTTGCGGTTAA ATGGAGAGTCTGGGACATTCCCTCATGATGGAACGGCTACCTTCTTTGTGTTGTCTACTCAAGGAAAGAGCGGGATACTTAGCTGAAAGGGTGAACAAGGTCGAGCGCGTTCAAACGTTGCTCCAGAGTACCCTCTTGGGCAGCAGTCGAAGAAAAGAGCAAAGTTCAGGCAAGAAAAAAAGAATGAAATACGAATGGATTGCATTCGAAAATCAGTATACCAGTAACAATTCTAAAGAAAGCCTGAACTGGCCTCCCGAAAGTTGTCTCAAGAGAGTCCTTTACGGCCCTCTCATACATAGCCATCTCTTCCTCGGATCAGAGAAGGAAGGGTTCCTCTACAAACCATTCAAGCTAAAATTGATTATTGTTGCTATCCAGTTCGAACTATCTATGGGACCGGGTCATTTCTCGAGAACAATAGCTAAGGGTCCTGATACTACCACTTGGATCTGGAACCTTCATGCTGATGCTCACGATTTCGATAGCCATACTAGTGATTTGGAGGAGATCTCTCGAAAAGTATTTAGTGCCCATTTCGGCCAACTCTCCATCATCTTTCTTTGGCTGAGTGGGATGTATTTCCACGGTCCTCCTTGCGGTTAA MESLGHSLMMERLPSLCCLLKERAGYLAERVNKVERVQTLLQSTLLGSSRRKEQSSGKKKRMKYEWIAFENQYTSNNSKESLNWPPESCLKRVLYGPLIHSHLFLGSEKEGFLYKPFKLKLIIVAIQFELSMGPGHFSRTIAKGPDTTTWIWNLHADAHDFDSHTSDLEEISRKVFSAHFGQLSIIFLWLSGMYFHGPPCG Homology
BLAST of CmUC11G211140 vs. NCBI nr
Match: YP_009915545.1 (photosystem I P700 apoprotein A1 [Cyperus rotundus] >YP_009946245.1 photosystem I P700 apoprotein A1 [Cyperus aromaticus] >YP_010045781.1 photosystem I P700 apoprotein A1 [Cyperus exaltatus] >YP_010045871.1 photosystem I P700 apoprotein A1 [Cyperus iria] >QNA49773.1 photosystem I P700 apoprotein A1 [Cyperus rotundus] >QOE56887.1 photosystem I P700 apoprotein A1 [Cyperus rotundus] >QOE57057.1 photosystem I P700 apoprotein A1 [Cyperus aromaticus] >QPG24656.1 photosystem I P700 apoprotein A1 [Cyperus exaltatus] >QPG24746.1 photosystem I P700 apoprotein A1 [Cyperus iria]) HSP 1 Score: 146.4 bits (368), Expect = 2.7e-31 Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of CmUC11G211140 vs. NCBI nr
Match: YP_009774940.1 (photosystem I P700 chlorophyll a apoprotein A1 [Eleocharis dulcis] >QJA14996.1 photosystem I P700 chlorophyll a apoprotein A1 [Eleocharis dulcis]) HSP 1 Score: 146.4 bits (368), Expect = 2.7e-31 Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of CmUC11G211140 vs. NCBI nr
Match: AFA27136.1 (photosystem I P700 apoprotein A1, partial [Cyperus alternifolius]) HSP 1 Score: 146.4 bits (368), Expect = 2.7e-31 Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of CmUC11G211140 vs. NCBI nr
Match: YP_009775028.1 (photosystem I P700 chlorophyll a apoprotein A1 [Eleocharis cellulosa] >QJA15084.1 photosystem I P700 chlorophyll a apoprotein A1 [Eleocharis cellulosa]) HSP 1 Score: 146.4 bits (368), Expect = 2.7e-31 Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of CmUC11G211140 vs. NCBI nr
Match: YP_010121403.1 (photosystem I P700 chlorophyll a apoprotein A1 [Isolepis setacea] >QRE78400.1 photosystem I P700 chlorophyll a apoprotein A1 [Isolepis setacea]) HSP 1 Score: 146.4 bits (368), Expect = 2.7e-31 Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of CmUC11G211140 vs. ExPASy Swiss-Prot
Match: Q3V534 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Acorus calamus OX=4465 GN=psaA PE=3 SV=1) HSP 1 Score: 144.4 bits (363), Expect = 1.4e-33 Identity = 66/74 (89.19%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of CmUC11G211140 vs. ExPASy Swiss-Prot
Match: Q8S8X4 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Atropa belladonna OX=33113 GN=psaA PE=3 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.8e-33 Identity = 67/74 (90.54%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of CmUC11G211140 vs. ExPASy Swiss-Prot
Match: A0A335 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Coffea arabica OX=13443 GN=psaA PE=3 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.8e-33 Identity = 67/74 (90.54%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of CmUC11G211140 vs. ExPASy Swiss-Prot
Match: Q3C1H8 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Nicotiana sylvestris OX=4096 GN=psaA PE=3 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.8e-33 Identity = 67/74 (90.54%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of CmUC11G211140 vs. ExPASy Swiss-Prot
Match: Q33C36 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Nicotiana tomentosiformis OX=4098 GN=psaA PE=3 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.8e-33 Identity = 67/74 (90.54%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of CmUC11G211140 vs. ExPASy TrEMBL
Match: A0A7G5XUT9 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Cyperus rotundus OX=512623 GN=psaA PE=3 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.3e-31 Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of CmUC11G211140 vs. ExPASy TrEMBL
Match: A0A6H1XHC3 (Photosystem I P700 chlorophyll a apoprotein A1 OS=Eleocharis dulcis OX=110284 GN=psaA PE=3 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.3e-31 Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of CmUC11G211140 vs. ExPASy TrEMBL
Match: A0A7S9EYM5 (Photosystem I P700 apoprotein A1 OS=Cyperus exaltatus OX=1249727 GN=psaA PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.3e-31 Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of CmUC11G211140 vs. ExPASy TrEMBL
Match: A0A7S9EYR1 (Photosystem I P700 apoprotein A1 OS=Cyperus iria OX=388567 GN=psaA PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.3e-31 Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of CmUC11G211140 vs. ExPASy TrEMBL
Match: H6SZA7 (Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) OS=Cyperus alternifolius OX=4611 GN=psaA PE=3 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 1.3e-31 Identity = 67/74 (90.54%), Postives = 68/74 (91.89%), Query Frame = 0
BLAST of CmUC11G211140 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein ) HSP 1 Score: 143.7 bits (361), Expect = 1.6e-34 Identity = 66/74 (89.19%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of CmUC11G211140 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein ) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-09 Identity = 32/61 (52.46%), Postives = 42/61 (68.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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