CmUC11G211130 (gene) Watermelon (USVL531) v1

Overview
NameCmUC11G211130
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionYcf15
LocationCmU531Chr11: 7705789 .. 7707929 (-)
RNA-Seq ExpressionCmUC11G211130
SyntenyCmUC11G211130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATGTATGAGAGGGCCGTAAAGGACTCTCTTGAGACAACTTTCGGGAGGCCAGTTCAGGCTTTCTTTAGAATTGTTACTGGTATACTGATTTTCGAATGCAATCCATTCGTATTTCATTCTTTTTTTCTTGCCTGAACTTTGCTCTTTTCTTCGACTGCTGCCCAAGAGGGTACTCTGGAGCAACGTTTGAACGCGCTCGACCTTGTTCACCCTTTCAGCTAAGTATCCCGCTCTTTCCTTGAGTAGACAACACAAAGAAGGTAGCCGTTCCATCATGAGGGAATGTCCCAGACTCTCCATAGTCGTAAGCGAGAACATGCCCAATCTATCATAGCCAACTCGTTTGCTTCTATCGTCAAGCACTACTCAAAGGGACAGGGTAGATGCCGACATGAAGATCAATGGCACCTTCAACCGGTTCCTCGCTTCAACAACAATAAAACGTAAAAGTAACAGATCTCAATATTCGGAAGTGAGAAAGAAGCATCTCTTTTTTATTGATCCATGTCATGCATTACAATATCAGCTAGAAAAGAAAAGATGGGAATTCCTCAACCCGTATACTATTTCGAACAGCGACCAAAGTGGGCTTACTCGTATGCAGCCATTTTTGCTTCTTGCTCAGCAGCCTCCTTTCTTTCTGCGTCCTTAACTCGCCGATAGTTCTAGATCTGGGCCAAGACGAACTATTGTAGGGGATTTATTGAAACCATTGAATTCGGAATATGGTAAAGTGGCTCCTGGGTGGGGAACTACACCTTTAATGGGTGTCGCGATGGGTCTATTTGCGATATTCCTATGTATTATTTTGGAAATTTATAATTCTTCCATTTTACTGGACGGAATTTCAAGCAATTAGATTCGATTCACAAGAACCCATAAATAACTTTTCAATAAAAAGGAAAGTCTAAAGTATGTAGGTTTCCGCTTTTTAGCCCACTCTTTTTTGGTAGTTCGATCGTGGAATTTATTTTTTTTCTGTATTTTCGGAATATGAGTGTGTGACTTGTTAGAATTGATCCTATGGATACGCCATTAAAGGTGTAGTTCCCCACCCAGGAGCCACTTTACCATATTCCGAATTCAATGGTTTCAACAAATCCCCTACAATAGTTCGTCTTGGCCCAGATCTAGAACTATCGTCAACGGTTTGTGTAGCCATAAATAATCCTATATTTTTTTTTAATTCAGTGAGATCTGTTGACTTTGTATACCATTCCGTTGTAAATAAATGATCTTATCATAGATCCATTGTGGTCTTGAAATTATATAATAATGAAAACAGCAACCCTAGTTGCCATCTCTATATCTGGTTTACTTGTAAGTTTTACTGGGTATGCCTTATATACTGCTTTTGGGCAACCCTCTCAACAAGTAAGAGATCCATTCGAGGAACACGGGGACTAGTTGAAGTAATGAGCCTCACAATATTGATACGGGCCTTTTCCACATAATCCACATAAAAAGGGAATCTTTTGTTACAATAGAAGCAGAAGTGATGTGGATTATTCAAGAATCGAAGACGATAGTGGAATGCCTATGCTTTATTCTTCTGAAGGTGGGAGAAAAGATAAAACTTATTTAATTATTCAGCAAAATTGAAGTTTGAAACTTATATAATTAACCTCTTTTGCTTAACTCGAGAAAAAAATGGGCTAGATCTATGAAAAATTTCATTCAATTAGATTAGATATGGTAAATTTTTTTAAATATGGGACAGCAAAAGAATTGACTGTTGAGCCGTATGAGGTAGGAAACTCTCAAGTACGGTTCTAAGGGAAGGAATTTACCTGCCTATTCCGACCGGGAGGCCTCAGATCGGAAGTGCTTTCGCTCTCAACTCTTGTTTCTTATGCCCGAAAACTAGAATCTCTCTGGTTCCATAGAATGAAAACCACTCTTTCCTTCCTTCCTAGAATAGTCCGCTTGTCATTGACTTCCATAAAAGAAGAAGAAATCGTATAGAACTCATATAACTAAGATAGAGGAAGACGTCTAAAGAAAAGAAAGACATTCAGTTGATGTACGGGGTCAACTGCCGAGCCCCCTTTCTCCTCGATCCACAGAGACAAAATGGAGGACTGGTGCCAACAGTTCATCACGGAAGAAAGGACTCACTGAGCCGAGATCACTAA

mRNA sequence

ATGGCTATGTATGAGAGGGCCGTAAAGGACTCTCTTGAGACAACTTTCGGGAGGCCAGTTCAGGCTTTCTTTAGAATTGTTACTGTGAGATCTGTTGACTTTGTATACCATTCCGTTAGGAAGACGTCTAAAGAAAAGAAAGACATTCAGTTGATGTACGGGGTCAACTGCCGAGCCCCCTTTCTCCTCGATCCACAGAGACAAAATGGAGGACTGGTGCCAACAGTTCATCACGGAAGAAAGGACTCACTGAGCCGAGATCACTAA

Coding sequence (CDS)

ATGGCTATGTATGAGAGGGCCGTAAAGGACTCTCTTGAGACAACTTTCGGGAGGCCAGTTCAGGCTTTCTTTAGAATTGTTACTGTGAGATCTGTTGACTTTGTATACCATTCCGTTAGGAAGACGTCTAAAGAAAAGAAAGACATTCAGTTGATGTACGGGGTCAACTGCCGAGCCCCCTTTCTCCTCGATCCACAGAGACAAAATGGAGGACTGGTGCCAACAGTTCATCACGGAAGAAAGGACTCACTGAGCCGAGATCACTAA

Protein sequence

MAMYERAVKDSLETTFGRPVQAFFRIVTVRSVDFVYHSVRKTSKEKKDIQLMYGVNCRAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH
Homology
[Close]
BLAST of CmUC11G211130 vs. NCBI nr
Match: YP_009526348.1 (ORF70 [Hemsleya lijiangensis] >YP_009526362.1 hypothetical protein [Hemsleya lijiangensis] >YP_010119780.1 hypothetical protein KQ497_pgp019 [Hemsleya zhejiangensis] >YP_010119793.1 hypothetical protein KQ497_pgp006 [Hemsleya zhejiangensis] >AXU40542.1 ORF70 [Hemsleya lijiangensis] >AXU40543.1 hypothetical protein [Hemsleya lijiangensis] >QRC26890.1 hypothetical protein [Hemsleya zhejiangensis] >QRC26891.1 hypothetical protein [Hemsleya zhejiangensis])

HSP 1 Score: 71.6 bits (174), Expect = 3.7e-09
Identity = 37/67 (55.22%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 22 AFFRIVTVRSVDFVYHSVRKTSKEKKDIQLMYGVNCRAPFLLDPQRQNGGLVPTVHHGRK 81
          A   +V ++ VDF+   + ++S              RAPFLLDPQRQNGGLVPTVHHGRK
Sbjct: 9  ARIHVVYLKEVDFLASLMLQSSSR------------RAPFLLDPQRQNGGLVPTVHHGRK 63

Query: 82 DSLSRDH 89
          DSLSRDH
Sbjct: 69 DSLSRDH 63

[Close]
BLAST of CmUC11G211130 vs. NCBI nr
Match: YP_009326036.1 (Ycf15 [Citrullus lanatus] >YP_009326049.1 Ycf15 [Citrullus lanatus] >YP_009348078.1 Ycf15 [Citrullus mucosospermus] >YP_009348091.1 Ycf15 [Citrullus mucosospermus] >YP_009431603.1 Ycf15 [Citrullus amarus] >YP_009431616.1 Ycf15 [Citrullus amarus] >YP_009447497.1 Ycf15 [Cucurbita maxima] >YP_009447510.1 Ycf15 [Cucurbita maxima] >YP_009447582.1 Ycf15 [Cucurbita moschata] >YP_009447595.1 Ycf15 [Cucurbita moschata] >YP_009456107.1 Ycf15 [Momordica charantia] >YP_009456121.1 Ycf15 [Momordica charantia] >YP_009456192.1 Ycf15 [Lagenaria siceraria] >YP_009456206.1 Ycf15 [Lagenaria siceraria] >YP_009674437.1 Ycf15 [Siraitia grosvenorii] >YP_009674450.1 Ycf15 [Siraitia grosvenorii] >YP_009738249.1 Ycf15 [Siraitia siamensis] >YP_009738262.1 Ycf15 [Siraitia siamensis] >ALO21733.1 hypothetical protein [Cucurbita argyrosperma] >ALO21782.1 hypothetical protein [Cucurbita argyrosperma var. palmeri] >ALO21845.1 hypothetical protein [Cucurbita argyrosperma subsp. sororia] >ALO21907.1 hypothetical protein [Cucurbita cordata] >ALO21967.1 hypothetical protein [Cucurbita digitata] >ALO22071.1 hypothetical protein [Cucurbita ecuadorensis] >ALO22103.1 hypothetical protein [Cucurbita ficifolia] >ALO22165.1 hypothetical protein [Cucurbita foetidissima] >ALO22290.1 hypothetical protein [Cucurbita maxima subsp. andreana] >ALO22561.1 hypothetical protein [Cucurbita pepo subsp. fraterna] >ALO22624.1 hypothetical protein [Cucurbita pepo subsp. ovifera] >ALO22673.1 hypothetical protein [Cucurbita pepo var. ozarkana] >ALO22800.1 hypothetical protein [Cucurbita pepo var. texana] >ALO22884.1 hypothetical protein [Cucurbita pedatifolia] >APW82509.1 Ycf15 [Citrullus lanatus subsp. vulgaris] >QJD26341.1 Ycf15 [Trichosanthes kirilowii] >QJD26516.1 Ycf15 [Trichosanthes kirilowii var. japonica] >QJD26690.1 Ycf15 [Trichosanthes rosthornii] >QKX48521.1 Ycf15-like protein [Luffa acutangula] >QKX48607.1 Ycf15-like protein [Luffa aegyptiaca] >QNM38578.1 hypothetical protein [Lagenaria siceraria var. microcarpa] >QZL38728.1 Ycf15 protein [Citrullus ecirrhosus])

HSP 1 Score: 70.9 bits (172), Expect = 6.4e-09
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 58 RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH 89
          RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH
Sbjct: 33 RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH 63

[Close]
BLAST of CmUC11G211130 vs. NCBI nr
Match: YP_009430673.1 (ORF70 [Gynostemma cardiospermum] >YP_009430687.1 ORF70 [Gynostemma cardiospermum] >YP_009439850.1 ORF70 [Gynostemma laxiflorum] >YP_009439864.1 ORF70 [Gynostemma laxiflorum] >YP_009440024.1 ORF70 [Gynostemma pentagynum] >YP_009440038.1 ORF70 [Gynostemma pentagynum] >YP_009440203.1 ORF70 [Gynostemma longipes] >YP_009440217.1 ORF70 [Gynostemma longipes] >YP_009440290.1 ORF70 [Gynostemma burmanicum (nom. inval.)] >YP_009440304.1 ORF70 [Gynostemma burmanicum (nom. inval.)] >YP_009440377.1 ORF70 [Gynostemma pubescens] >YP_009440391.1 ORF70 [Gynostemma pubescens] >YP_010015185.1 ORF70 [Gynostemma yixingense] >YP_010015199.1 ORF70 [Gynostemma yixingense] >ANI25230.1 ORF70 [Gynostemma pentaphyllum] >ANI25243.1 ORF70 [Gynostemma pentaphyllum] >ART65027.1 ORF70 [Gynostemma pentaphyllum] >ART65028.1 ORF70 [Gynostemma pentaphyllum] >ART65114.1 ORF70 [Gynostemma cardiospermum])

HSP 1 Score: 70.9 bits (172), Expect = 6.4e-09
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 58 RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH 89
          RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH
Sbjct: 33 RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH 63

[Close]
BLAST of CmUC11G211130 vs. NCBI nr
Match: YP_009505126.1 (Ycf15 [Cucurbita pepo] >YP_009505139.1 Ycf15 [Cucurbita pepo] >ALO22743.1 hypothetical protein [Cucurbita pepo subsp. pepo] >ALO22795.1 hypothetical protein [Cucurbita pepo subsp. pepo] >AWX90418.1 Ycf15 [Cucurbita pepo] >AWX90419.1 Ycf15 [Cucurbita pepo])

HSP 1 Score: 70.9 bits (172), Expect = 6.4e-09
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 58 RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH 89
          RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH
Sbjct: 33 RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH 63

[Close]
BLAST of CmUC11G211130 vs. NCBI nr
Match: QZL38640.1 (Ycf15 protein [Citrullus naudinianus] >QZL38654.1 Ycf15 protein [Citrullus naudinianus])

HSP 1 Score: 69.3 bits (168), Expect = 1.9e-08
Identity = 30/31 (96.77%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 58 RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH 89
          RAPFLLDPQRQNGGLVPTVHHGRKDSLS+DH
Sbjct: 33 RAPFLLDPQRQNGGLVPTVHHGRKDSLSQDH 63

[Close]
BLAST of CmUC11G211130 vs. ExPASy TrEMBL
Match: A0A346TMF3 (ORF70 OS=Hemsleya lijiangensis OX=210377 GN=ORF70 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-09
Identity = 37/67 (55.22%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 22 AFFRIVTVRSVDFVYHSVRKTSKEKKDIQLMYGVNCRAPFLLDPQRQNGGLVPTVHHGRK 81
          A   +V ++ VDF+   + ++S              RAPFLLDPQRQNGGLVPTVHHGRK
Sbjct: 9  ARIHVVYLKEVDFLASLMLQSSSR------------RAPFLLDPQRQNGGLVPTVHHGRK 63

Query: 82 DSLSRDH 89
          DSLSRDH
Sbjct: 69 DSLSRDH 63

[Close]
BLAST of CmUC11G211130 vs. ExPASy TrEMBL
Match: A0A2H4T240 (Ycf15 OS=Cucurbita maxima OX=3661 GN=ycf15 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.1e-09
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 58 RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH 89
          RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH
Sbjct: 33 RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH 63

[Close]
BLAST of CmUC11G211130 vs. ExPASy TrEMBL
Match: A0A6M3S757 (Ycf15 OS=Trichosanthes rosthornii OX=676073 GN=ycf15 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.1e-09
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 58 RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH 89
          RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH
Sbjct: 33 RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH 63

[Close]
BLAST of CmUC11G211130 vs. ExPASy TrEMBL
Match: A0A0S2IGC5 (Uncharacterized protein OS=Cucurbita pepo subsp. ovifera OX=184141 GN=orf70 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.1e-09
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 58 RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH 89
          RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH
Sbjct: 33 RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH 63

[Close]
BLAST of CmUC11G211130 vs. ExPASy TrEMBL
Match: A0A6M3RTI4 (Ycf15 OS=Trichosanthes kirilowii OX=3677 GN=ycf15 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.1e-09
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0 

Query: 58 RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH 89
          RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH
Sbjct: 33 RAPFLLDPQRQNGGLVPTVHHGRKDSLSRDH 63

The following BLAST results are available for this feature:
BLAST of CmUC11G211130 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009526348.13.7e-0955.22ORF70 [Hemsleya lijiangensis] >YP_009526362.1 hypothetical protein [Hemsleya lij... [more]
YP_009326036.16.4e-09100.00Ycf15 [Citrullus lanatus] >YP_009326049.1 Ycf15 [Citrullus lanatus] >YP_00934807... [more]
YP_009430673.16.4e-09100.00ORF70 [Gynostemma cardiospermum] >YP_009430687.1 ORF70 [Gynostemma cardiospermum... [more]
YP_009505126.16.4e-09100.00Ycf15 [Cucurbita pepo] >YP_009505139.1 Ycf15 [Cucurbita pepo] >ALO22743.1 hypoth... [more]
QZL38640.11.9e-0896.77Ycf15 protein [Citrullus naudinianus] >QZL38654.1 Ycf15 protein [Citrullus naudi... [more]
BLAST of CmUC11G211130 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC11G211130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A346TMF31.8e-0955.22ORF70 OS=Hemsleya lijiangensis OX=210377 GN=ORF70 PE=4 SV=1[more]
A0A2H4T2403.1e-09100.00Ycf15 OS=Cucurbita maxima OX=3661 GN=ycf15 PE=4 SV=1[more]
A0A6M3S7573.1e-09100.00Ycf15 OS=Trichosanthes rosthornii OX=676073 GN=ycf15 PE=4 SV=1[more]
A0A0S2IGC53.1e-09100.00Uncharacterized protein OS=Cucurbita pepo subsp. ovifera OX=184141 GN=orf70 PE=4... [more]
A0A6M3RTI43.1e-09100.00Ycf15 OS=Trichosanthes kirilowii OX=3677 GN=ycf15 PE=4 SV=1[more]
BLAST of CmUC11G211130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC11G211130.1CmUC11G211130.1mRNA