CmUC11G206080 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCCTTAAAGGCAGTCTCTCGGTTATCGTCTCGCTTGCAATCCCTCGCTCCAAAGTTCAACAAAAGATCTTCATCTTCTGAGCTATCTCCTTTCAAATCGACTTGTCAATCTCAGCCTTCCACAGCTTCTACATCGCGTCTTCCTTGCACTTCGCGGTGAGACTTCTCTCTTTCCTCCATTTAGAATCATAGAATCGTTAGTTACAGAAAGAAATTCGGTTCAATTCTTTACTGTGGAATAGATTTTGACAATAGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTACATAGCGCCATAGCTGCAGCAAGATTGATTTCAAGTCTGACCATTGAATCTCAAAGATGGGGTTTGGTTCCACAGGGTATGTTTTGCTTAAGTATCTTCTTGCACTTGGTTCTAGTGAATGCCGATGATTCTTCATTATTGTATTTGCTTGAGGCATGTTGCGAAGGAAGTCTTCCAAATATCCGTTTGTTTGTTCACACTTCATGGATTTTTTTTCCCTCAAAATAATGTCGGATGTTTTTATAGATTTTAGGATCTGATCATAGTTCGGGTCTAGTTCAATGCATATGTCTTGTGGAATTCCAGTACGATTGAATTAATCGGCCTGATGCTTGCCTGTACTACTAGAATTGCCATCACCTTTGAATTGTGACTAGAGCCATATAGGTGAAAATGATAGATGGAAAACATCACTTTGAGTTGGTGTATGAATGAAGCAAGCTGAGTGATGCAATCAGCTTTAGTATTTGAAAATTTAATATAACTGATCGTATATAAGAAGTAGCCACAGTTGATTTCACAACTTTAGCATTAATCTAGGTTTTGAACAACTTAACTGTGGTAGATTACTTTTATGTGTTGACTCTTCTAATTTATCACCAAGCTTCAAAGTTGTCTCTCAAGTGATATAGTTTTCAACTAGTTGATGGTAAAGAATATTTCTGTTCTTCAATTTATGAACCCTTCAAAAAAAAAAAAAAAAAAATTGTGATGCATATCTCAACATTAGTGTCATCATATCATTTTTATTCTATCTATTATTACCAATGTCTGATATGTGAGTGTATACCCATACTAACATATGACATCTCAGTTATTTTCAATGGAATATCAGTTGATGCTACAATTCATAGAACTACATCTCTTAGAATTAATGGTTTTGTCATGACTCATGGGTCGTCACTTAGTAAGTTTTTGGTGGCTGGTGGGTGCACGTGTTTGGGTTATTTGGCCGGAAAGAAATCAAAGAAATGAATTGTTGAACATTTGAATACATTTTCTCCACTTACCAAAAAACTCTTGAACCATTTTTTGGTTCTTAGAGTTAGTGTAATTATTATTCGATTGGTGTTCAAGTTAATAGGAGACAGGAAAGTTTCTTTTCTGTGTGTGCGTGCAGGGCATTTAATTTTTGGCTAGTTGGGGGTTTCTCTTCCTCCCTATTCAATGTAAAATACTCCTTTGAACAAGTACCTTCTTTTCTTCCTCAGATGTTGCCACATCTTATAGTGACAACAAAACTACCCGAAGAAAGTAATCCATTCGATACGTTTCGTTATGGTAAAAAAATAAACATTACTAACTTCCAATGACAAGAAGTTGGTAGCATCAAGTGGGGTAAGAATTAAAATAACCCCACTTGCACCTGAATCGTATGCTTTCTTAGGTGGCTATGATGATAATGACTCTTTGTTCATTCTCTGCTGGTTCACTGGGAAGTTTTAGGGATTGTTAATTTTGTTTTTATGGACTTGGGTAGTTCTTCCAAAAGCTGAGCTGTACTTCAGATGCTGTTAGGTTCAAAATTCAGAAACCAGGCTAAGTCAATCTAGACTGATGCTCAATTGCTTATCTTCGTATAAGGCTCGGAGAGTGAAAATAGTGGGAATTTTTACAAAAACCAAGGTAATCAAAATTTTGGCATCTTTCTTGGCTCTTAAATTTTGGTTAGATGTCTAGTATTCTATCTCCCCCCTTATATTTTCTTTATGATAGTTGTATGCACTAATTGAAACTTCTGCGCTTGAGAACGAGAAGAGTGTGAAAGTATGGGGCAAAGAAAATCATTTAGGGGCATTTCAGGCTTGAGTTTGGCATCTTCAAGCCTAGGTTTTAGTACGTCTAGGGGTTTAAGTCAACGGTTTGGCAAGTTGTTGGGTTGTGCCGCTTTAGAAAGCATGGATTTGGAGAAATAGTGTGAGGGGGCTTGAATAGTGGGCTATGGAGCACAGACACAAAAACGGGATATGGATATGATAGGATACAACGATATATCAATTTCTAAAAAACTAAGATACAGATACGTCATTTATATATATAAAAATTTAACCTAAAACACTAAATATAATCCACCAAAAGGCACACTTTGAAGAAATAGGTTTCTATCCTGTGAAGAAGATGAGGGTGGTAGGACAAGGTTGAGCGTGGGTGTTGCTTAGTTGTAGTGGCATGGCTTAATTGTAGTCGAAGAAATGAGTTTTTGTTCTGAAAAGAAGATTGCGGGGAGGGGGCAGGGGTCATGACTCATGACTCGTGGATTTGTTGTGAGAGCAGGGAAACGAGGAAATCTCATTTTACGGTTTATTTGTCCTTCTTTTAGTTTATTTTTCTATTGGGCTGTTAGATTGGGCTTCATAATTGAAAATTTTAAAATAGGTTGTGGGTTGAAAAAATAAAATCCAGCCCAAAAAATGCCATTGGCGTGACCCCTCCACGTATCTGGAGGGGGACACACACAAATTGGAAAAAAAAGACAAGATACTTCATTTCATGTATTTAACACGCATCTCTCACGTATATGGATGTATATGTTATCGATTTTCTGCACATTTTGAAGTATCTGTGTTTCATAGAGAGTGGGTTATTGTTCAAACTCGTTCGTCTCTTCAATAAAATACGGTTTTGGAAACTCCTCATCCTAAACATCGGTTAAGCTTGGGAAGCCAAAACCATGTCCCAAATGCTTCTTTACTTATTATAAGTTGTTTGAAAATGTCTTCTGAGTTCTAACATTAACTTTTGTTAATTTCATTCATGGGAGAAAGTTATGTATGCAAGTTTGTAGTTCATCATTTCAATTAGATTCATGCAAGACAAGAATTCCCTTTGATTCTGTTTTGTCTTCCCTGCAGGTATTTCAATGCCTTTATGACGGCTTTGCTTTGCAGGAAGTTGTTCTCTGTAGTTTTCTGTTTATTGACAATTGA ATGGCGTCCTTAAAGGCAGTCTCTCGGTTATCGTCTCGCTTGCAATCCCTCGCTCCAAAGTTCAACAAAAGATCTTCATCTTCTGAGCTATCTCCTTTCAAATCGACTTGTCAATCTCAGCCTTCCACAGCTTCTACATCGCGTCTTCCTTGCACTTCGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTACATAGCGCCATAGCTGCAGCAAGATTGATTTCAAGTCTGACCATTGAATCTCAAAGATGGGGTTTGGTTCCACAGGGTATGTTTTGCTTAAGTATCTTCTTGCACTTGGTTCTAGTGAATGCCGATGATTCTTCATTATTGTATTTGCTTGAGGCATGTTGCGAAGGAAGTCTTCCAAATATCCAAACCAGGCTAAGTCAATCTAGACTGATGCTCAATTGCTTATCTTCGTATAAGGCTCGGAGAGTGAAAATAGTGGGAATTTTTACAAAAACCAAGGTATTTCAATGCCTTTATGACGGCTTTGCTTTGCAGGAAGTTGTTCTCTGTAGTTTTCTGTTTATTGACAATTGA ATGGCGTCCTTAAAGGCAGTCTCTCGGTTATCGTCTCGCTTGCAATCCCTCGCTCCAAAGTTCAACAAAAGATCTTCATCTTCTGAGCTATCTCCTTTCAAATCGACTTGTCAATCTCAGCCTTCCACAGCTTCTACATCGCGTCTTCCTTGCACTTCGCGGTTACCAGTGGAGTTGAGTAGTCAGGGGTCATTGATGCCATTACATAGCGCCATAGCTGCAGCAAGATTGATTTCAAGTCTGACCATTGAATCTCAAAGATGGGGTTTGGTTCCACAGGGTATGTTTTGCTTAAGTATCTTCTTGCACTTGGTTCTAGTGAATGCCGATGATTCTTCATTATTGTATTTGCTTGAGGCATGTTGCGAAGGAAGTCTTCCAAATATCCAAACCAGGCTAAGTCAATCTAGACTGATGCTCAATTGCTTATCTTCGTATAAGGCTCGGAGAGTGAAAATAGTGGGAATTTTTACAAAAACCAAGGTATTTCAATGCCTTTATGACGGCTTTGCTTTGCAGGAAGTTGTTCTCTGTAGTTTTCTGTTTATTGACAATTGA MASLKAVSRLSSRLQSLAPKFNKRSSSSELSPFKSTCQSQPSTASTSRLPCTSRLPVELSSQGSLMPLHSAIAAARLISSLTIESQRWGLVPQGMFCLSIFLHLVLVNADDSSLLYLLEACCEGSLPNIQTRLSQSRLMLNCLSSYKARRVKIVGIFTKTKVFQCLYDGFALQEVVLCSFLFIDN Homology
BLAST of CmUC11G206080 vs. NCBI nr
Match: KAA0061549.1 (protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa] >TYK10723.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]) HSP 1 Score: 191.4 bits (485), Expect = 6.8e-45 Identity = 108/119 (90.76%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of CmUC11G206080 vs. NCBI nr
Match: XP_038889658.1 (uncharacterized protein LOC120079520 [Benincasa hispida]) HSP 1 Score: 161.8 bits (408), Expect = 5.8e-36 Identity = 90/95 (94.74%), Postives = 91/95 (95.79%), Query Frame = 0
BLAST of CmUC11G206080 vs. NCBI nr
Match: XP_004139345.1 (uncharacterized protein LOC101209110 [Cucumis sativus] >KGN60611.1 hypothetical protein Csa_019508 [Cucumis sativus]) HSP 1 Score: 157.1 bits (396), Expect = 1.4e-34 Identity = 89/95 (93.68%), Postives = 90/95 (94.74%), Query Frame = 0
BLAST of CmUC11G206080 vs. NCBI nr
Match: XP_008458440.1 (PREDICTED: uncharacterized protein LOC103497847 isoform X1 [Cucumis melo]) HSP 1 Score: 152.9 bits (385), Expect = 2.7e-33 Identity = 87/95 (91.58%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of CmUC11G206080 vs. NCBI nr
Match: XP_023547330.1 (uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo] >XP_023547331.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo] >XP_023547332.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 152.1 bits (383), Expect = 4.6e-33 Identity = 84/95 (88.42%), Postives = 90/95 (94.74%), Query Frame = 0
BLAST of CmUC11G206080 vs. ExPASy TrEMBL
Match: A0A5A7V7B3 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00330 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 3.3e-45 Identity = 108/119 (90.76%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of CmUC11G206080 vs. ExPASy TrEMBL
Match: A0A0A0LKT5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004120 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 6.9e-35 Identity = 89/95 (93.68%), Postives = 90/95 (94.74%), Query Frame = 0
BLAST of CmUC11G206080 vs. ExPASy TrEMBL
Match: A0A1S3C7U8 (uncharacterized protein LOC103497847 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497847 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 1.3e-33 Identity = 87/95 (91.58%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of CmUC11G206080 vs. ExPASy TrEMBL
Match: A0A6J1G399 (uncharacterized protein LOC111450380 OS=Cucurbita moschata OX=3662 GN=LOC111450380 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 2.9e-33 Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of CmUC11G206080 vs. ExPASy TrEMBL
Match: A0A1S3C7Z3 (uncharacterized protein LOC103497847 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497847 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 4.9e-33 Identity = 87/98 (88.78%), Postives = 89/98 (90.82%), Query Frame = 0
BLAST of CmUC11G206080 vs. TAIR 10
Match: AT1G55205.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13674.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 80.1 bits (196), Expect = 2.1e-15 Identity = 57/105 (54.29%), Postives = 74/105 (70.48%), Query Frame = 0
BLAST of CmUC11G206080 vs. TAIR 10
Match: AT1G55205.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13674.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 78.6 bits (192), Expect = 6.0e-15 Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of CmUC11G206080 vs. TAIR 10
Match: AT3G13674.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast hits to 76 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14 Identity = 53/97 (54.64%), Postives = 72/97 (74.23%), Query Frame = 0
BLAST of CmUC11G206080 vs. TAIR 10
Match: AT4G39300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 42.7 bits (99), Expect = 3.6e-04 Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = 0
BLAST of CmUC11G206080 vs. TAIR 10
Match: AT4G17310.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 4.8e-04 Identity = 35/85 (41.18%), Postives = 44/85 (51.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|