CmUC10G200400 (gene) Watermelon (USVL531) v1

Overview
NameCmUC10G200400
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionPhytosulfokine-beta
LocationCmU531Chr10: 32488660 .. 32489219 (+)
RNA-Seq ExpressionCmUC10G200400
SyntenyCmUC10G200400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACCAGAATTCCCATGGCTTCTTCTTCTTCTTTTTCATCTTTTTTCTCTTCATTTTCCTTCTCTTTTCTTCCCATTCAGCCTCTGGTCGTTTTCCACCATCCAAACAAGGTAAAACCCACTTATAAAAATCTTTCCTTTTTCCTTTTTCCTTTTTCCTTTTTCTTGTGTTCATAAATTTAGAAGGAAAAAAAATTAAAAGTTCTTCCTTTTTCACTAAAAACTTACATTTTCTCACTCTTCTCTCTCTTTCCCTTTGATCTTCCTGGAAAATTTGCAGGTATAGAAGAAACCCACAAGAAGCTCAGCCATGGAATGGTCCAAGCAGATTCATGGCCAGATTCCCCCCATGTGAATAAATACCCTTTTTTTTTTTATTTAATTTTCTTTTTCCAATTTTCTTCTTTGGATTTTAATGGGTTTTTGTTTTTTTTTTTTTTTTTGGTAGATAATGGGAGGAAGAGAGAATGGAGAAGAAGAAGAAGAAGAATGGGAGAAGAGAAAGATGATGTTAGAAGCACATTTGGATTATGTTTACACACAAAATGAGAAGCCTTGA

mRNA sequence

ATGAACCAGAATTCCCATGGCTTCTTCTTCTTCTTTTTCATCTTTTTTCTCTTCATTTTCCTTCTCTTTTCTTCCCATTCAGCCTCTGGTCGTTTTCCACCATCCAAACAAGGTATAGAAGAAACCCACAAGAAGCTCAGCCATGGAATGGTCCAAGCAGATTCATGGCCAGATTCCCCCCATATAATGGGAGGAAGAGAGAATGGAGAAGAAGAAGAAGAAGAATGGGAGAAGAGAAAGATGATGTTAGAAGCACATTTGGATTATGTTTACACACAAAATGAGAAGCCTTGA

Coding sequence (CDS)

ATGAACCAGAATTCCCATGGCTTCTTCTTCTTCTTTTTCATCTTTTTTCTCTTCATTTTCCTTCTCTTTTCTTCCCATTCAGCCTCTGGTCGTTTTCCACCATCCAAACAAGGTATAGAAGAAACCCACAAGAAGCTCAGCCATGGAATGGTCCAAGCAGATTCATGGCCAGATTCCCCCCATATAATGGGAGGAAGAGAGAATGGAGAAGAAGAAGAAGAAGAATGGGAGAAGAGAAAGATGATGTTAGAAGCACATTTGGATTATGTTTACACACAAAATGAGAAGCCTTGA

Protein sequence

MNQNSHGFFFFFFIFFLFIFLLFSSHSASGRFPPSKQGIEETHKKLSHGMVQADSWPDSPHIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEKP
Homology
[Close]
BLAST of CmUC10G200400 vs. NCBI nr
Match: XP_038906014.1 (uncharacterized protein LOC120091917 [Benincasa hispida])

HSP 1 Score: 172.6 bits (436), Expect = 1.7e-39
Identity = 89/107 (83.18%), Postives = 91/107 (85.05%), Query Frame = 0 

Query: 1   MNQNSHGFFFFFFIFFLFIFLLFSSHSASGRFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
           MNQNSHGFFFFFF+ FLFIFLLFSSHSAS RFP SKQGIEETHKK+SHGMVQADSWPD P
Sbjct: 1   MNQNSHGFFFFFFLSFLFIFLLFSSHSASARFPSSKQGIEETHKKISHGMVQADSWPDFP 60

Query: 61  HIMGGRENG----------EEEEEEWEKRKMMLEAHLDYVYTQNEKP 98
           HIMGGRE G          EEEEEEWEK KMMLEAHLDYVYTQNEKP
Sbjct: 61  HIMGGREKGGGGGGGGEEEEEEEEEWEKGKMMLEAHLDYVYTQNEKP 107

[Close]
BLAST of CmUC10G200400 vs. NCBI nr
Match: XP_022935155.1 (uncharacterized protein LOC111442110 [Cucurbita moschata])

HSP 1 Score: 152.1 bits (383), Expect = 2.4e-33
Identity = 78/96 (81.25%), Postives = 84/96 (87.50%), Query Frame = 0 

Query: 1  MNQNSHGFFFFFFIFFLFIFLLFSSHSASGRFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
          MNQ+SHGFFFFFF  FLFIFLLF S SAS RFP +KQG+ ETH+KL+HG VQADSWPD P
Sbjct: 1  MNQSSHGFFFFFFFSFLFIFLLF-SQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFP 60

Query: 61 HIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEK 97
          HI+GGRE GEEEEE WEKRKMMLEAHLDYVYTQN K
Sbjct: 61 HIIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQNVK 95

[Close]
BLAST of CmUC10G200400 vs. NCBI nr
Match: KAG6580671.1 (hypothetical protein SDJN03_20673, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 151.4 bits (381), Expect = 4.1e-33
Identity = 77/94 (81.91%), Postives = 83/94 (88.30%), Query Frame = 0 

Query: 1  MNQNSHGFFFFFFIFFLFIFLLFSSHSASGRFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
          MNQ+SHGFFFFFF  FLFIFLLF S SAS RFP +KQG+ ETH+KL+HG VQADSWPD P
Sbjct: 1  MNQSSHGFFFFFFFSFLFIFLLF-SQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFP 60

Query: 61 HIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQN 95
          HI+GGRE GEEEEE WEKRKMMLEAHLDYVYTQN
Sbjct: 61 HIIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQN 93

[Close]
BLAST of CmUC10G200400 vs. NCBI nr
Match: XP_023528216.1 (putative phytosulfokines 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 149.4 bits (376), Expect = 1.6e-32
Identity = 76/96 (79.17%), Postives = 84/96 (87.50%), Query Frame = 0 

Query: 1  MNQNSHGFFFFFFIFFLFIFLLFSSHSASGRFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
          MNQ+SHGFFFFFF  FLFIFLLF S SAS RFP +KQG+ ETH+KL+HG+VQADSW D P
Sbjct: 1  MNQSSHGFFFFFFFSFLFIFLLF-SQSASARFPAAKQGLGETHEKLTHGVVQADSWADFP 60

Query: 61 HIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEK 97
          H++GGRE GEEEEE WEKRKMMLEAHLDYVYTQN K
Sbjct: 61 HMIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQNVK 95

[Close]
BLAST of CmUC10G200400 vs. NCBI nr
Match: XP_022983167.1 (uncharacterized protein LOC111481800 [Cucurbita maxima])

HSP 1 Score: 142.5 bits (358), Expect = 1.9e-30
Identity = 77/97 (79.38%), Postives = 84/97 (86.60%), Query Frame = 0 

Query: 1  MNQNSHGFFFFFFIFFLFIFLLFSSHSASGRFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
          MNQ+SHGFFFFFF  FLFIFLLF S S S RFP +KQG+ ETH+KL+HG+VQADSW D P
Sbjct: 1  MNQSSHGFFFFFF-SFLFIFLLF-SQSTSARFPAAKQGLGETHEKLTHGVVQADSWADFP 60

Query: 61 HIMGGRENGEEEEEE-WEKRKMMLEAHLDYVYTQNEK 97
          HI+GGRE GEEEEEE WEKRKMMLEAHLDYVYTQN K
Sbjct: 61 HIIGGREKGEEEEEEGWEKRKMMLEAHLDYVYTQNVK 95

[Close]
BLAST of CmUC10G200400 vs. ExPASy TrEMBL
Match: A0A6J1F9T2 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111442110 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.2e-33
Identity = 78/96 (81.25%), Postives = 84/96 (87.50%), Query Frame = 0 

Query: 1  MNQNSHGFFFFFFIFFLFIFLLFSSHSASGRFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
          MNQ+SHGFFFFFF  FLFIFLLF S SAS RFP +KQG+ ETH+KL+HG VQADSWPD P
Sbjct: 1  MNQSSHGFFFFFFFSFLFIFLLF-SQSASARFPAAKQGLGETHEKLTHGGVQADSWPDFP 60

Query: 61 HIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEK 97
          HI+GGRE GEEEEE WEKRKMMLEAHLDYVYTQN K
Sbjct: 61 HIIGGREKGEEEEEGWEKRKMMLEAHLDYVYTQNVK 95

[Close]
BLAST of CmUC10G200400 vs. ExPASy TrEMBL
Match: A0A6J1IYI6 (Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111481800 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 9.2e-31
Identity = 77/97 (79.38%), Postives = 84/97 (86.60%), Query Frame = 0 

Query: 1  MNQNSHGFFFFFFIFFLFIFLLFSSHSASGRFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
          MNQ+SHGFFFFFF  FLFIFLLF S S S RFP +KQG+ ETH+KL+HG+VQADSW D P
Sbjct: 1  MNQSSHGFFFFFF-SFLFIFLLF-SQSTSARFPAAKQGLGETHEKLTHGVVQADSWADFP 60

Query: 61 HIMGGRENGEEEEEE-WEKRKMMLEAHLDYVYTQNEK 97
          HI+GGRE GEEEEEE WEKRKMMLEAHLDYVYTQN K
Sbjct: 61 HIIGGREKGEEEEEEGWEKRKMMLEAHLDYVYTQNVK 95

[Close]
BLAST of CmUC10G200400 vs. ExPASy TrEMBL
Match: A0A1S4DUI1 (Phytosulfokine-beta OS=Cucumis melo OX=3656 GN=LOC107990603 PE=3 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 5.0e-29
Identity = 75/103 (72.82%), Postives = 83/103 (80.58%), Query Frame = 0 

Query: 2   NQNSHGFFFFFFIF-----FLFIFLLFSSHSASGRFPPSKQGIEETHKKLSHG-MVQA-D 61
           N+NSHGFFFFFF F     FLFI LLFSSHSAS RFPPSK GIEETHKK+S+G MVQ+ D
Sbjct: 81  NRNSHGFFFFFFFFFFFISFLFILLLFSSHSASARFPPSKHGIEETHKKISYGSMVQSGD 140

Query: 62  SWPDSPHIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEKP 98
           SWPD PH+   ++  E EEEE EKRKMMLEAHLDYVYTQ+E P
Sbjct: 141 SWPDFPHVKREKDEEEVEEEEGEKRKMMLEAHLDYVYTQHENP 183

[Close]
BLAST of CmUC10G200400 vs. ExPASy TrEMBL
Match: A0A6J1KTY7 (Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111498637 PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.5e-25
Identity = 69/97 (71.13%), Postives = 79/97 (81.44%), Query Frame = 0 

Query: 1  MNQNSHGFFFFFFIFFLFIFLLFSSHSASGRFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
          MNQ+SHGF  FF+ FF+F+ L   S SA+ RF P+KQG EETH KLSHGM+QADSWPD P
Sbjct: 1  MNQSSHGFSSFFY-FFIFLLL---SQSATARFLPTKQGFEETHNKLSHGMIQADSWPDFP 60

Query: 61 HIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEKP 98
           I+  RE  EEE+EEWEKR+MMLEAHLDYVYTQNEKP
Sbjct: 61 QII--REE-EEEDEEWEKRRMMLEAHLDYVYTQNEKP 90

[Close]
BLAST of CmUC10G200400 vs. ExPASy TrEMBL
Match: A0A6J1FSF0 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111447730 PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.9e-24
Identity = 65/97 (67.01%), Postives = 72/97 (74.23%), Query Frame = 0 

Query: 1  MNQNSHGFFFFFFIFFLFIFLLFSSHSASGRFPPSKQGIEETHKKLSHGMVQADSWPDSP 60
          MNQ+SHG FF F         L  S SA+ RF P+KQG EETH KLSHGM+Q DSWPD P
Sbjct: 1  MNQSSHGLFFIF---------LLLSQSATARFLPTKQGFEETHNKLSHGMIQPDSWPDFP 60

Query: 61 HIMGGRENGEEEEEEWEKRKMMLEAHLDYVYTQNEKP 98
           I+  RE  EEE+EEWEKR+MMLEAHLDYVYTQNEKP
Sbjct: 61 QII--RE--EEEDEEWEKRRMMLEAHLDYVYTQNEKP 84

The following BLAST results are available for this feature:
BLAST of CmUC10G200400 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038906014.11.7e-3983.18uncharacterized protein LOC120091917 [Benincasa hispida][more]
XP_022935155.12.4e-3381.25uncharacterized protein LOC111442110 [Cucurbita moschata][more]
KAG6580671.14.1e-3381.91hypothetical protein SDJN03_20673, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023528216.11.6e-3279.17putative phytosulfokines 6 [Cucurbita pepo subsp. pepo][more]
XP_022983167.11.9e-3079.38uncharacterized protein LOC111481800 [Cucurbita maxima][more]
BLAST of CmUC10G200400 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC10G200400 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F9T21.2e-3381.25Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111442110 PE=3 SV=1[more]
A0A6J1IYI69.2e-3179.38Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111481800 PE=3 SV=1[more]
A0A1S4DUI15.0e-2972.82Phytosulfokine-beta OS=Cucumis melo OX=3656 GN=LOC107990603 PE=3 SV=1[more]
A0A6J1KTY71.5e-2571.13Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111498637 PE=3 SV=1[more]
A0A6J1FSF04.9e-2467.01Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111447730 PE=3 SV=1[more]
BLAST of CmUC10G200400 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..75
NoneNo IPR availablePANTHERPTHR33285:SF33PHYTOSULFOKINES 6-RELATEDcoord: 11..97
IPR009438PhytosulfokinePFAMPF06404PSKcoord: 19..96
e-value: 1.2E-10
score: 42.2
IPR009438PhytosulfokinePANTHERPTHR33285PHYTOSULFOKINES 3coord: 11..97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC10G200400.1CmUC10G200400.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030154 cell differentiation
biological_process GO:0008283 cell population proliferation
biological_process GO:0007165 signal transduction
cellular_component GO:0005576 extracellular region
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0008083 growth factor activity