CmUC10G199800 (gene) Watermelon (USVL531) v1

Overview
NameCmUC10G199800
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr10: 31886816 .. 31887145 (-)
RNA-Seq ExpressionCmUC10G199800
SyntenyCmUC10G199800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGAAAGAAGGTAGCTTTGGTGGTGGTGGTGGTGGCTGCGATGATATTTTCGAGTTCGTTAGCTCAACTCGTCGCGAACTATGAACAACGTCAGTTAGAGGAAAATGAAAATGGCAACGATCTTCTCCGACTCTTCTCTGACGGTAGCAACGATGGAGAAGTAAACTACAAAAATGATAACCCGAGAAAAATGATGAAAGCGGCAGCACCACCGCGCCCCTCATGTTTTGGAAATTTCTGTGGTGGTGGACTACTCCCTTGTGCTGAACCCTGCCAATGCAACATTCCAATGGGTGCAGTAAGGGGATATTGTGTTGACTTTTAA

mRNA sequence

ATGGAGGGAAAGAAGGTAGCTTTGGTGGTGGTGGTGGTGGCTGCGATGATATTTTCGAGTTCGTTAGCTCAACTCGTCGCGAACTATGAACAACGTCAGTTAGAGGAAAATGAAAATGGCAACGATCTTCTCCGACTCTTCTCTGACGGTAGCAACGATGGAGAAGTAAACTACAAAAATGATAACCCGAGAAAAATGATGAAAGCGGCAGCACCACCGCGCCCCTCATGTTTTGGAAATTTCTGTGGTGGTGGACTACTCCCTTGTGCTGAACCCTGCCAATGCAACATTCCAATGGGTGCAGTAAGGGGATATTGTGTTGACTTTTAA

Coding sequence (CDS)

ATGGAGGGAAAGAAGGTAGCTTTGGTGGTGGTGGTGGTGGCTGCGATGATATTTTCGAGTTCGTTAGCTCAACTCGTCGCGAACTATGAACAACGTCAGTTAGAGGAAAATGAAAATGGCAACGATCTTCTCCGACTCTTCTCTGACGGTAGCAACGATGGAGAAGTAAACTACAAAAATGATAACCCGAGAAAAATGATGAAAGCGGCAGCACCACCGCGCCCCTCATGTTTTGGAAATTTCTGTGGTGGTGGACTACTCCCTTGTGCTGAACCCTGCCAATGCAACATTCCAATGGGTGCAGTAAGGGGATATTGTGTTGACTTTTAA

Protein sequence

MEGKKVALVVVVVAAMIFSSSLAQLVANYEQRQLEENENGNDLLRLFSDGSNDGEVNYKNDNPRKMMKAAAPPRPSCFGNFCGGGLLPCAEPCQCNIPMGAVRGYCVDF
Homology
BLAST of CmUC10G199800 vs. NCBI nr
Match: KGN59161.1 (hypothetical protein Csa_002402 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 3.5e-25
Identity = 70/113 (61.95%), Postives = 81/113 (71.68%), Query Frame = 0

Query: 1   MEGKKVALVVVVVAAMIFSSSLAQLVANYEQRQLEENENGNDLLRLFSDGSNDGEVNYKN 60
           MEGKK+ALVV++V   IF+ SLAQ   N ++RQ E+NEN  + ++LFSDGSND  V YK+
Sbjct: 1   MEGKKLALVVLMVMT-IFTCSLAQDALNDDKRQFEKNEN-KEYIQLFSDGSNDKGVRYKD 60

Query: 61  DNPRKMMKAA------APPRPSCFGNFCGGGLLPCAEPCQCNIPMGAVRGYCV 108
           D  RKMMK A       PP P CFGNFCGGGLL C EPC CNIPMGA RG CV
Sbjct: 61  DYSRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCV 111

BLAST of CmUC10G199800 vs. NCBI nr
Match: TYK30388.1 (hypothetical protein E5676_scaffold9509G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 114.8 bits (286), Expect = 4.8e-22
Identity = 70/115 (60.87%), Postives = 83/115 (72.17%), Query Frame = 0

Query: 1   MEGKKVALVVVVVAAMIFSSSLAQLVANYEQRQLEENENGNDLLRLFSDGSND-GE-VNY 60
           MEGKK+AL VVV+  MIF+  LA +  N E+RQ EENEN  + ++LFSD SN+ GE V Y
Sbjct: 1   MEGKKLAL-VVVMTTMIFTCCLAHVALN-EERQFEENEN-KEYIQLFSDDSNNVGEGVKY 60

Query: 61  KNDNPRKMMKAA-----APPRPS-CFGNFCGGGLLPCAEPCQCNIPMGAVRGYCV 108
           KND  RKM+K A      PP PS C+GNFCGGGLLPC EPC C+IP+GA RG CV
Sbjct: 61  KNDYSRKMIKEAPTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCV 112

BLAST of CmUC10G199800 vs. NCBI nr
Match: KAA0043852.1 (hypothetical protein E6C27_scaffold236G001870 [Cucumis melo var. makuwa])

HSP 1 Score: 102.8 bits (255), Expect = 1.9e-18
Identity = 60/103 (58.25%), Postives = 72/103 (69.90%), Query Frame = 0

Query: 13  VAAMIFSSSLAQLVANYEQRQLEENENGNDLLRLFSDGSND-GE-VNYKNDNPRKMMKAA 72
           +  MIF+  LA +  N E+RQ EENEN  + ++LFSD SN+ GE V YKND  RKM+K A
Sbjct: 1   MTTMIFTCCLAHVALN-EERQFEENEN-KEYIQLFSDDSNNVGEGVKYKNDYSRKMIKEA 60

Query: 73  -----APPRPS-CFGNFCGGGLLPCAEPCQCNIPMGAVRGYCV 108
                 PP PS C+GNFCGGGLLPC EPC C+IP+GA RG CV
Sbjct: 61  PTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCV 101

BLAST of CmUC10G199800 vs. NCBI nr
Match: KAG6580718.1 (hypothetical protein SDJN03_20720, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 91.7 bits (226), Expect = 4.3e-15
Identity = 59/117 (50.43%), Postives = 70/117 (59.83%), Query Frame = 0

Query: 1   MEGKKVALVVVVVAAMIFSSSLAQLVANYEQRQLEENENGNDLLRLFSDGSNDGEVNYKN 60
           MEGKKVALVV++V  M F+S+LA+                    +L +DGSND   + + 
Sbjct: 1   MEGKKVALVVLLV-TMAFTSALAR-------------------NQLIADGSNDRAGSDEY 60

Query: 61  DNPRKMMKAA-------AP-PRPSCFGNFCGGGLLPCAEPCQCNIPMGAVRGYCVDF 110
           D   KM + A       AP PRPSCFGNFCGGGLLPC EPC C IPMG+ RG CVDF
Sbjct: 61  DELIKMAEGAPEAAPEPAPSPRPSCFGNFCGGGLLPCDEPCFCFIPMGSQRGSCVDF 97

BLAST of CmUC10G199800 vs. ExPASy TrEMBL
Match: A0A0A0LGQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778180 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.7e-25
Identity = 70/113 (61.95%), Postives = 81/113 (71.68%), Query Frame = 0

Query: 1   MEGKKVALVVVVVAAMIFSSSLAQLVANYEQRQLEENENGNDLLRLFSDGSNDGEVNYKN 60
           MEGKK+ALVV++V   IF+ SLAQ   N ++RQ E+NEN  + ++LFSDGSND  V YK+
Sbjct: 1   MEGKKLALVVLMVMT-IFTCSLAQDALNDDKRQFEKNEN-KEYIQLFSDGSNDKGVRYKD 60

Query: 61  DNPRKMMKAA------APPRPSCFGNFCGGGLLPCAEPCQCNIPMGAVRGYCV 108
           D  RKMMK A       PP P CFGNFCGGGLL C EPC CNIPMGA RG CV
Sbjct: 61  DYSRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCV 111

BLAST of CmUC10G199800 vs. ExPASy TrEMBL
Match: A0A5D3E3L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9509G00010 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.3e-22
Identity = 70/115 (60.87%), Postives = 83/115 (72.17%), Query Frame = 0

Query: 1   MEGKKVALVVVVVAAMIFSSSLAQLVANYEQRQLEENENGNDLLRLFSDGSND-GE-VNY 60
           MEGKK+AL VVV+  MIF+  LA +  N E+RQ EENEN  + ++LFSD SN+ GE V Y
Sbjct: 1   MEGKKLAL-VVVMTTMIFTCCLAHVALN-EERQFEENEN-KEYIQLFSDDSNNVGEGVKY 60

Query: 61  KNDNPRKMMKAA-----APPRPS-CFGNFCGGGLLPCAEPCQCNIPMGAVRGYCV 108
           KND  RKM+K A      PP PS C+GNFCGGGLLPC EPC C+IP+GA RG CV
Sbjct: 61  KNDYSRKMIKEAPTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCV 112

BLAST of CmUC10G199800 vs. ExPASy TrEMBL
Match: A0A5A7TKL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001870 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 9.1e-19
Identity = 60/103 (58.25%), Postives = 72/103 (69.90%), Query Frame = 0

Query: 13  VAAMIFSSSLAQLVANYEQRQLEENENGNDLLRLFSDGSND-GE-VNYKNDNPRKMMKAA 72
           +  MIF+  LA +  N E+RQ EENEN  + ++LFSD SN+ GE V YKND  RKM+K A
Sbjct: 1   MTTMIFTCCLAHVALN-EERQFEENEN-KEYIQLFSDDSNNVGEGVKYKNDYSRKMIKEA 60

Query: 73  -----APPRPS-CFGNFCGGGLLPCAEPCQCNIPMGAVRGYCV 108
                 PP PS C+GNFCGGGLLPC EPC C+IP+GA RG CV
Sbjct: 61  PTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCV 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN59161.13.5e-2561.95hypothetical protein Csa_002402 [Cucumis sativus][more]
TYK30388.14.8e-2260.87hypothetical protein E5676_scaffold9509G00010 [Cucumis melo var. makuwa][more]
KAA0043852.11.9e-1858.25hypothetical protein E6C27_scaffold236G001870 [Cucumis melo var. makuwa][more]
KAG6580718.14.3e-1550.43hypothetical protein SDJN03_20720, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LGQ31.7e-2561.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778180 PE=4 SV=1[more]
A0A5D3E3L22.3e-2260.87Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TKL89.1e-1958.25Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC10G199800.1CmUC10G199800.1mRNA