Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGGCCCTCGAAACCGCATCCGCAGGCAAATTCCGGTACCGGAGATTGAGATACAGTGAGGAATTTGAGGAGGCATTTGGGAGATCAAGAGGAGGAGAAGGGATTAGGAAGAGATCGAGGCGGTGGTTCAGAATCAGAAAGGCTTCGTCGATTGGGAGGAGGTTGAAGAAGCTGAGAATCCCTAGCTTGAGAAAGCTGTTGAGGAGGAAATCGCGGTTGGTGAATGCTATGAGAGGCTCCATTTCGAAGGTTTTGAAGAGATTTAGAGATGGAGAAGCGTATTTGGGAGATCTTTTTGCGGGAAATTACTTGTTCCTTCAAGTCAATCCAAACTCCATCAAATGCTTCAACAAGAAAAATCATCACCGATTTCCTCTTCCAAATTTCCCCCAAACTTATTCCCTCCCAAGCTTTACCTAA
mRNA sequence
ATGCCGGCCCTCGAAACCGCATCCGCAGGCAAATTCCGGTACCGGAGATTGAGATACAGTGAGGAATTTGAGGAGGCATTTGGGAGATCAAGAGGAGGAGAAGGGATTAGGAAGAGATCGAGGCGGTGGTTCAGAATCAGAAAGGCTTCGTCGATTGGGAGGAGGTTGAAGAAGCTGAGAATCCCTAGCTTGAGAAAGCTGTTGAGGAGGAAATCGCGGTTGGTGAATGCTATGAGAGGCTCCATTTCGAAGGTTTTGAAGAGATTTAGAGATGGAGAAGCGTATTTGGGAGATCTTTTTGCGGGAAATTACTTGTTCCTTCAAGTCAATCCAAACTCCATCAAATGCTTCAACAAGAAAAATCATCACCGATTTCCTCTTCCAAATTTCCCCCAAACTTATTCCCTCCCAAGCTTTACCTAA
Coding sequence (CDS)
ATGCCGGCCCTCGAAACCGCATCCGCAGGCAAATTCCGGTACCGGAGATTGAGATACAGTGAGGAATTTGAGGAGGCATTTGGGAGATCAAGAGGAGGAGAAGGGATTAGGAAGAGATCGAGGCGGTGGTTCAGAATCAGAAAGGCTTCGTCGATTGGGAGGAGGTTGAAGAAGCTGAGAATCCCTAGCTTGAGAAAGCTGTTGAGGAGGAAATCGCGGTTGGTGAATGCTATGAGAGGCTCCATTTCGAAGGTTTTGAAGAGATTTAGAGATGGAGAAGCGTATTTGGGAGATCTTTTTGCGGGAAATTACTTGTTCCTTCAAGTCAATCCAAACTCCATCAAATGCTTCAACAAGAAAAATCATCACCGATTTCCTCTTCCAAATTTCCCCCAAACTTATTCCCTCCCAAGCTTTACCTAA
Protein sequence
MPALETASAGKFRYRRLRYSEEFEEAFGRSRGGEGIRKRSRRWFRIRKASSIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLFAGNYLFLQVNPNSIKCFNKKNHHRFPLPNFPQTYSLPSFT
Homology
BLAST of CmUC09G179000 vs. NCBI nr
Match:
XP_038889218.1 (uncharacterized protein LOC120079105 [Benincasa hispida])
HSP 1 Score: 233.4 bits (594), Expect = 1.2e-57
Identity = 123/140 (87.86%), Postives = 128/140 (91.43%), Query Frame = 0
Query: 1 MPALETASAGKFRYRRLRYSEEFEEAFGRSRGGEGIRKRSRRWFRIRKASSIGRRLKKLR 60
M LETA A KFRYRRL YSEEFEEAFGR RGGE I KRS+RWFRIRKASSIGRRLKKLR
Sbjct: 1 MADLETAPAAKFRYRRLSYSEEFEEAFGRYRGGERILKRSKRWFRIRKASSIGRRLKKLR 60
Query: 61 IPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLFAGNYLFLQVNPNSIKCFNKK 120
IPSLRKLLRRKS+LVNAMRGSISK+LKRFRDGEAYLGDLFAGNYLFLQVNP+S+KC K
Sbjct: 61 IPSLRKLLRRKSQLVNAMRGSISKILKRFRDGEAYLGDLFAGNYLFLQVNPSSMKCL--K 120
Query: 121 NHHRFPLPNFPQTYSLPSFT 141
NHHRFPL NFPQTYSLPSFT
Sbjct: 121 NHHRFPLQNFPQTYSLPSFT 138
BLAST of CmUC09G179000 vs. NCBI nr
Match:
XP_011655383.1 (uncharacterized protein LOC105435522 [Cucumis sativus] >KGN51342.1 hypothetical protein Csa_009087 [Cucumis sativus])
HSP 1 Score: 207.2 bits (526), Expect = 9.1e-50
Identity = 118/153 (77.12%), Postives = 127/153 (83.01%), Query Frame = 0
Query: 1 MPALETASAGKFRYRRLRYSEEFEEAFGRSR--GGEGIRKRSRR---WFRIR-----KAS 60
M LETASAGKFRYRRLRYSEEFEEAFGRSR GGEGIRKR RR WFR+R +
Sbjct: 1 MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60
Query: 61 SIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLFAGNYLFLQVN 120
SIGRRLKKLRIPSLRKLLRRK RLVNAMRGSI+KV+KRFRDGEAYLGDLFAGNYLFLQVN
Sbjct: 61 SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120
Query: 121 PNSIKCFNKKNHHR----FPLPNFPQTYSLPSF 140
P+S+KC +HH+ F + NFPQTYSLPSF
Sbjct: 121 PSSMKCLKNHHHHQQQHGFDVRNFPQTYSLPSF 153
BLAST of CmUC09G179000 vs. NCBI nr
Match:
XP_016902323.1 (PREDICTED: uncharacterized protein LOC107991631 [Cucumis melo])
HSP 1 Score: 199.9 bits (507), Expect = 1.4e-47
Identity = 118/151 (78.15%), Postives = 128/151 (84.77%), Query Frame = 0
Query: 1 MPALETASAGKFRYRRLRYSEEFEEAFGRSR-GGEGIRK--RSRRWF---RIRKAS---S 60
M LETASAGKFRYRRLRYSEEFEEAFGRSR GG GIRK R+RRW+ R+RK S S
Sbjct: 1 MADLETASAGKFRYRRLRYSEEFEEAFGRSRGGGGGIRKRWRTRRWWFRMRMRKGSSSLS 60
Query: 61 IGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLFAGNYLFLQVNP 120
IGRRLKKLRIPSLRKL+RRK RLVNAMRGSI+KVLKRFRDGEAYLGDLFAGNYLFLQVNP
Sbjct: 61 IGRRLKKLRIPSLRKLMRRKWRLVNAMRGSIAKVLKRFRDGEAYLGDLFAGNYLFLQVNP 120
Query: 121 NSIKCFNKKNHHR---FPLPNFPQTYSLPSF 140
+S+KC KNHH+ F + NF QTYSLP+F
Sbjct: 121 SSMKCM--KNHHQQHGFDVRNFTQTYSLPNF 149
BLAST of CmUC09G179000 vs. NCBI nr
Match:
XP_023551709.1 (uncharacterized protein LOC111809563 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 193.0 bits (489), Expect = 1.8e-45
Identity = 111/141 (78.72%), Postives = 121/141 (85.82%), Query Frame = 0
Query: 1 MPALETASA-GKFRYRRLRYSEEFEEAFGRSRGGEGIRK----RSRRWFRIRKASSIGRR 60
MP L+T +A GKFRYRRLRYSEEFEEAFGRSRGGE R+ RS+RWFRIR+A SIGRR
Sbjct: 1 MPDLDTTAAPGKFRYRRLRYSEEFEEAFGRSRGGEERRRRFVGRSKRWFRIRRA-SIGRR 60
Query: 61 LKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLFAGNYLFLQVNPNSIK 120
LKKLR+PSLRKLLRRKSRLV AMRGSI+KV+KRFR+GEAYLGDLFAGNYLFLQVNP+SIK
Sbjct: 61 LKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAYLGDLFAGNYLFLQVNPSSIK 120
Query: 121 CFNKKNHHRFPLPNFPQTYSL 137
C KNHH L NF TYSL
Sbjct: 121 C--HKNHHS-ALQNFAPTYSL 137
BLAST of CmUC09G179000 vs. NCBI nr
Match:
XP_022990096.1 (uncharacterized protein LOC111487096 [Cucurbita maxima])
HSP 1 Score: 190.7 bits (483), Expect = 8.8e-45
Identity = 110/141 (78.01%), Postives = 120/141 (85.11%), Query Frame = 0
Query: 1 MPALE-TASAGKFRYRRLRYSEEFEEAFGRSRGGEGIRK----RSRRWFRIRKASSIGRR 60
MP L+ TA GKFRYRRLRYSEEFEEAFGRSR GE R+ RS+RWF+IR+A SIGRR
Sbjct: 1 MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIRRA-SIGRR 60
Query: 61 LKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLFAGNYLFLQVNPNSIK 120
LKKLR+PSLRKLLRRKSRLV AM+GSISKV+KRFR+GEAYLGDLFAGNYLFLQVNP+SIK
Sbjct: 61 LKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAYLGDLFAGNYLFLQVNPSSIK 120
Query: 121 CFNKKNHHRFPLPNFPQTYSL 137
C KNHH LPNF TYSL
Sbjct: 121 C--HKNHHS-ALPNFAPTYSL 137
BLAST of CmUC09G179000 vs. ExPASy TrEMBL
Match:
A0A0A0KSD1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517900 PE=4 SV=1)
HSP 1 Score: 207.2 bits (526), Expect = 4.4e-50
Identity = 118/153 (77.12%), Postives = 127/153 (83.01%), Query Frame = 0
Query: 1 MPALETASAGKFRYRRLRYSEEFEEAFGRSR--GGEGIRKRSRR---WFRIR-----KAS 60
M LETASAGKFRYRRLRYSEEFEEAFGRSR GGEGIRKR RR WFR+R +
Sbjct: 1 MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKGSSSL 60
Query: 61 SIGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLFAGNYLFLQVN 120
SIGRRLKKLRIPSLRKLLRRK RLVNAMRGSI+KV+KRFRDGEAYLGDLFAGNYLFLQVN
Sbjct: 61 SIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQVN 120
Query: 121 PNSIKCFNKKNHHR----FPLPNFPQTYSLPSF 140
P+S+KC +HH+ F + NFPQTYSLPSF
Sbjct: 121 PSSMKCLKNHHHHQQQHGFDVRNFPQTYSLPSF 153
BLAST of CmUC09G179000 vs. ExPASy TrEMBL
Match:
A0A1S4E272 (uncharacterized protein LOC107991631 OS=Cucumis melo OX=3656 GN=LOC107991631 PE=4 SV=1)
HSP 1 Score: 199.9 bits (507), Expect = 7.0e-48
Identity = 118/151 (78.15%), Postives = 128/151 (84.77%), Query Frame = 0
Query: 1 MPALETASAGKFRYRRLRYSEEFEEAFGRSR-GGEGIRK--RSRRWF---RIRKAS---S 60
M LETASAGKFRYRRLRYSEEFEEAFGRSR GG GIRK R+RRW+ R+RK S S
Sbjct: 1 MADLETASAGKFRYRRLRYSEEFEEAFGRSRGGGGGIRKRWRTRRWWFRMRMRKGSSSLS 60
Query: 61 IGRRLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLFAGNYLFLQVNP 120
IGRRLKKLRIPSLRKL+RRK RLVNAMRGSI+KVLKRFRDGEAYLGDLFAGNYLFLQVNP
Sbjct: 61 IGRRLKKLRIPSLRKLMRRKWRLVNAMRGSIAKVLKRFRDGEAYLGDLFAGNYLFLQVNP 120
Query: 121 NSIKCFNKKNHHR---FPLPNFPQTYSLPSF 140
+S+KC KNHH+ F + NF QTYSLP+F
Sbjct: 121 SSMKCM--KNHHQQHGFDVRNFTQTYSLPNF 149
BLAST of CmUC09G179000 vs. ExPASy TrEMBL
Match:
A0A6J1JM01 (uncharacterized protein LOC111487096 OS=Cucurbita maxima OX=3661 GN=LOC111487096 PE=4 SV=1)
HSP 1 Score: 190.7 bits (483), Expect = 4.3e-45
Identity = 110/141 (78.01%), Postives = 120/141 (85.11%), Query Frame = 0
Query: 1 MPALE-TASAGKFRYRRLRYSEEFEEAFGRSRGGEGIRK----RSRRWFRIRKASSIGRR 60
MP L+ TA GKFRYRRLRYSEEFEEAFGRSR GE R+ RS+RWF+IR+A SIGRR
Sbjct: 1 MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIRRA-SIGRR 60
Query: 61 LKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLFAGNYLFLQVNPNSIK 120
LKKLR+PSLRKLLRRKSRLV AM+GSISKV+KRFR+GEAYLGDLFAGNYLFLQVNP+SIK
Sbjct: 61 LKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAYLGDLFAGNYLFLQVNPSSIK 120
Query: 121 CFNKKNHHRFPLPNFPQTYSL 137
C KNHH LPNF TYSL
Sbjct: 121 C--HKNHHS-ALPNFAPTYSL 137
BLAST of CmUC09G179000 vs. ExPASy TrEMBL
Match:
A0A6J1E2Z5 (uncharacterized protein LOC111430312 OS=Cucurbita moschata OX=3662 GN=LOC111430312 PE=4 SV=1)
HSP 1 Score: 189.1 bits (479), Expect = 1.2e-44
Identity = 110/142 (77.46%), Postives = 119/142 (83.80%), Query Frame = 0
Query: 1 MPALE-TASAGKFRYRRLRYSEEFEEAFGRSRGGEGIRK-----RSRRWFRIRKASSIGR 60
MP L+ TA GKFRYRRLRYSEEFEEAFGRSR GE R+ RS+RWFRIR+A SIGR
Sbjct: 17 MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRA-SIGR 76
Query: 61 RLKKLRIPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLFAGNYLFLQVNPNSI 120
RLKKLR+PSLRKLLRRKSRLV AMRGSI+KV+KRFR+GEAYLGDLFAGNYLFLQVNP+SI
Sbjct: 77 RLKKLRVPSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAYLGDLFAGNYLFLQVNPSSI 136
Query: 121 KCFNKKNHHRFPLPNFPQTYSL 137
KC KNHH L NF TYSL
Sbjct: 137 KC--HKNHHS-ALQNFAPTYSL 154
BLAST of CmUC09G179000 vs. ExPASy TrEMBL
Match:
A0A6J1FMJ7 (uncharacterized protein LOC111445317 OS=Cucurbita moschata OX=3662 GN=LOC111445317 PE=4 SV=1)
HSP 1 Score: 175.6 bits (444), Expect = 1.4e-40
Identity = 102/138 (73.91%), Postives = 113/138 (81.88%), Query Frame = 0
Query: 1 MPALETASAGKFRYRRLRYSEEFEEAFGRSRGGEGIRKRSRRWFRIRKASSIGRRLKKLR 60
M LE ASA KFRYRRLR+S+E E AF RSR GE +R FR+R+A SIGRRLKKLR
Sbjct: 53 MADLEIASAAKFRYRRLRHSDELESAFARSRLGE---QRRFGGFRMRRA-SIGRRLKKLR 112
Query: 61 IPSLRKLLRRKSRLVNAMRGSISKVLKRFRDGEAYLGDLFAGNYLFLQVNPNSIKCFNKK 120
IPSLRKL RKSRLVNAM GSISKVLKRFRDGEAYLGDLFAGNYLFLQ+NP+SIKC
Sbjct: 113 IPSLRKLF-RKSRLVNAMGGSISKVLKRFRDGEAYLGDLFAGNYLFLQINPSSIKCL--A 172
Query: 121 NHHRFPLPNFPQTYSLPS 139
NHH++PL NFP T+SLP+
Sbjct: 173 NHHQYPLQNFPPTFSLPA 183
BLAST of CmUC09G179000 vs. TAIR 10
Match:
AT5G14410.1 (unknown protein; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 63.2 bits (152), Expect = 2.0e-10
Identity = 45/116 (38.79%), Postives = 71/116 (61.21%), Query Frame = 0
Query: 33 GEGIRKRSRRW-FRIRKASSIG--RRLK-KLRIPSLRKLLRRKSRLVNAMRGSISKVLKR 92
GE R+RS + +R ++ S+G RR++ +++I LR +R+K+ N ++ I K+LKR
Sbjct: 23 GETTRRRSSFYSYRFKRVVSLGGRRRIRVRVKIRRLRGFVRKKA---NRVKTGILKILKR 82
Query: 93 FRDGEAYLGDLFAGNYLFLQVNPNSI-------KCFNKKNHHRFPLPNFPQTYSLP 138
++ +++ GDLFAGNYLF+QVNP+S+ K F +N NFP SLP
Sbjct: 83 LKESQSHFGDLFAGNYLFMQVNPSSLNAKYVFDKSFQGQN------GNFPSRLSLP 129
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038889218.1 | 1.2e-57 | 87.86 | uncharacterized protein LOC120079105 [Benincasa hispida] | [more] |
XP_011655383.1 | 9.1e-50 | 77.12 | uncharacterized protein LOC105435522 [Cucumis sativus] >KGN51342.1 hypothetical ... | [more] |
XP_016902323.1 | 1.4e-47 | 78.15 | PREDICTED: uncharacterized protein LOC107991631 [Cucumis melo] | [more] |
XP_023551709.1 | 1.8e-45 | 78.72 | uncharacterized protein LOC111809563 [Cucurbita pepo subsp. pepo] | [more] |
XP_022990096.1 | 8.8e-45 | 78.01 | uncharacterized protein LOC111487096 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KSD1 | 4.4e-50 | 77.12 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517900 PE=4 SV=1 | [more] |
A0A1S4E272 | 7.0e-48 | 78.15 | uncharacterized protein LOC107991631 OS=Cucumis melo OX=3656 GN=LOC107991631 PE=... | [more] |
A0A6J1JM01 | 4.3e-45 | 78.01 | uncharacterized protein LOC111487096 OS=Cucurbita maxima OX=3661 GN=LOC111487096... | [more] |
A0A6J1E2Z5 | 1.2e-44 | 77.46 | uncharacterized protein LOC111430312 OS=Cucurbita moschata OX=3662 GN=LOC1114303... | [more] |
A0A6J1FMJ7 | 1.4e-40 | 73.91 | uncharacterized protein LOC111445317 OS=Cucurbita moschata OX=3662 GN=LOC1114453... | [more] |
Match Name | E-value | Identity | Description | |
AT5G14410.1 | 2.0e-10 | 38.79 | unknown protein; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bact... | [more] |