CmUC08G147070 (gene) Watermelon (USVL531) v1

Overview
NameCmUC08G147070
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionRetrotransposon protein
LocationCmU531Chr08: 15438490 .. 15439507 (-)
RNA-Seq ExpressionCmUC08G147070
SyntenyCmUC08G147070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCATAATGGCAGGTAATGGCAGGTAATGGTAGGAGGTCTAAACACGTATGACCAAAAGTGGAGGATGCTAAGTTGGTGGAAGCCCTATTGTATTTGGTGGAAACTGATTGGAGGTCCGACAATGGGACGTTTCGACCAGGATACCTACAGCACTTGGAGCGAATGCTGCATGAGAAAGTGCCCGGGTGCGCATTGAACCAGAACATCATTGAGTGCAAGGTGAGGAGTCTGAAGAAACAATACAACGTAGTATCAGAGATGTTAAGTCAGTCGGGGTTCGGGTGGAATGAGATGTTCAAATGTGTCCAGGTGGAGAGGGAGATTTTCGATCTTTGGGTTTAGGTAAGATTCTAGAGAAAAATAAAAAATATACTGGTACATGTTATCATATAAATATTAATAATGTTTATGTGTATCAATGCAGAGTCATCCTAGTGCGAAGGGGATGTGGAACAAGTCATTCCCCCATTACGATGAACTTTCCACCGTATTTGTGAAAGAAGAGCAGTAGGACAATCAAGTGAGGCCCCGCACGTGATGGCAACAAATGCATTTAGAGAATTTGAAGATGAGATTCGGCTTAGGTCACAGGACTGTCACACACTTGAGGTTCACCAGACAAAATCACCATTAAATCAAGATGGAATAGATGAAGAGCCAACAGAGCAATCTATAGGTAGAGCGATGTACCTGCCAAGTCATCTCGAGGCAGTAAGAGGAAGAGGCCATCATTCCAAGCTGAAATGATCGACATCATGAGATCAACTGTTAAAATGCAGGACACATACATGGGAAGACTTGCATCGTGGCAGAAGGAAAATTATGAGTTGGAGTTTGGGCGTCGGAAGGAAGTAGTAAACGCCATATACAACATTAATGGCTTGAATGAGGATGATCAGGTCACCCTTATTGACCTCTTTGTCATAGACATTCAGAAGATAAATTGTTTCCTTGGAGTACTGGAACATGCACGGAAGAGGTATTGCCTCTGTCTACTAGGACGAAACATGTAG

mRNA sequence

ATGCAGCATAATGGCAGGTCCGACAATGGGACGTTTCGACCAGGATACCTACAGCACTTGGAGCGAATGCTGCATGAGAAAGTGCCCGGGTGCGCATTGAACCAGAACATCATTGAGTGCAAGGTGAGGAGTCTGAAGAAACAATACAACGTAGTATCAGAGATGTTAAGTCAGTCGGGGTTCGGGTGGAATGAGATGTTCAAATGTGTCCAGAGTCATCCTAGTGCGAAGGGGATGTGGAACAAGTCATTCCCCCATTACGATGAACTTTCCACCGTATTTGTGAAAGAAGAGCAGTCACAGGACTGTCACACACTTGAGGTTCACCAGACAAAATCACCATTAAATCAAGATGGAATAGATGAAGAGCCAACAGAGCAATCTATAGGTAGAGCGATGTACCTGCCAAGTCATCTCGAGGCAGACACATACATGGGAAGACTTGCATCGTGGCAGAAGGAAAATTATGAGTTGGAGTTTGGGCGTCGGAAGGAAGTAGTAAACGCCATATACAACATTAATGGCTTGAATGAGGATGATCAGGTCACCCTTATTGACCTCTTTGTCATAGACATTCAGAAGATAAATTGTTTCCTTGGAGTACTGGAACATGCACGGAAGAGGTATTGCCTCTGTCTACTAGGACGAAACATGTAG

Coding sequence (CDS)

ATGCAGCATAATGGCAGGTCCGACAATGGGACGTTTCGACCAGGATACCTACAGCACTTGGAGCGAATGCTGCATGAGAAAGTGCCCGGGTGCGCATTGAACCAGAACATCATTGAGTGCAAGGTGAGGAGTCTGAAGAAACAATACAACGTAGTATCAGAGATGTTAAGTCAGTCGGGGTTCGGGTGGAATGAGATGTTCAAATGTGTCCAGAGTCATCCTAGTGCGAAGGGGATGTGGAACAAGTCATTCCCCCATTACGATGAACTTTCCACCGTATTTGTGAAAGAAGAGCAGTCACAGGACTGTCACACACTTGAGGTTCACCAGACAAAATCACCATTAAATCAAGATGGAATAGATGAAGAGCCAACAGAGCAATCTATAGGTAGAGCGATGTACCTGCCAAGTCATCTCGAGGCAGACACATACATGGGAAGACTTGCATCGTGGCAGAAGGAAAATTATGAGTTGGAGTTTGGGCGTCGGAAGGAAGTAGTAAACGCCATATACAACATTAATGGCTTGAATGAGGATGATCAGGTCACCCTTATTGACCTCTTTGTCATAGACATTCAGAAGATAAATTGTTTCCTTGGAGTACTGGAACATGCACGGAAGAGGTATTGCCTCTGTCTACTAGGACGAAACATGTAG

Protein sequence

MQHNGRSDNGTFRPGYLQHLERMLHEKVPGCALNQNIIECKVRSLKKQYNVVSEMLSQSGFGWNEMFKCVQSHPSAKGMWNKSFPHYDELSTVFVKEEQSQDCHTLEVHQTKSPLNQDGIDEEPTEQSIGRAMYLPSHLEADTYMGRLASWQKENYELEFGRRKEVVNAIYNINGLNEDDQVTLIDLFVIDIQKINCFLGVLEHARKRYCLCLLGRNM
Homology
BLAST of CmUC08G147070 vs. NCBI nr
Match: XP_038896380.1 (uncharacterized protein LOC120084641 [Benincasa hispida])

HSP 1 Score: 310.5 bits (794), Expect = 1.2e-80
Identity = 166/247 (67.21%), Postives = 178/247 (72.06%), Query Frame = 0

Query: 6   RSDNGTFRPGYLQHLERMLHEKVPGCALNQNIIECKVRSLKKQYNVVSEMLSQSGFGWNE 65
           RSDNGTFR GYLQ+LER+LHEKVPGCALNQN IECKVRSLKKQYN VSEMLSQSGFGWNE
Sbjct: 33  RSDNGTFRLGYLQYLERILHEKVPGCALNQNTIECKVRSLKKQYNAVSEMLSQSGFGWNE 92

Query: 66  MFKCVQ-----------SHPSAKGMWNKSFPHYDELSTVFVKEEQSQDCHTLEVHQTKSP 125
            FKCVQ           SH +AKGMWNKSF HYD+LSTVF K+    +CHT EV Q +SP
Sbjct: 93  EFKCVQVEKEIFDLWVRSHLNAKGMWNKSFLHYDDLSTVFGKDR--ANCHTPEVCQAESP 152

Query: 126 LNQDGIDEEPTEQSIGRAMYLPSHLEA-----------------------DTYMGRLASW 185
           LNQD IDEEP EQS GRA  L                              T+MGRLASW
Sbjct: 153 LNQDEIDEEPAEQSTGRASVLAESSRGSKRKRPSFQAEMIDIMRSTVEMQSTHMGRLASW 212

Query: 186 QKENYELEFGRRKEVVNAIYNINGLNEDDQVTLIDLFVIDIQKINCFLGVLEHARKRYCL 219
           QKE YELEFGRRKEVVNAIY+I+GL+EDDQVT IDL V DIQK +CFL V EHARKRYCL
Sbjct: 213 QKEKYELEFGRRKEVVNAIYSIDGLDEDDQVTFIDLLVTDIQKTDCFLAVPEHARKRYCL 272

BLAST of CmUC08G147070 vs. NCBI nr
Match: XP_038887234.1 (uncharacterized protein LOC120077425 [Benincasa hispida])

HSP 1 Score: 302.0 bits (772), Expect = 4.2e-78
Identity = 163/247 (65.99%), Postives = 176/247 (71.26%), Query Frame = 0

Query: 6   RSDNGTFRPGYLQHLERMLHEKVPGCALNQNIIECKVRSLKKQYNVVSEMLSQSGFGWNE 65
           RSDNGTFRPGYLQHLE++LHEKVPGCALN+N IECKVRSLKKQYN VSEMLSQSGF WNE
Sbjct: 33  RSDNGTFRPGYLQHLEQILHEKVPGCALNKNTIECKVRSLKKQYNAVSEMLSQSGFNWNE 92

Query: 66  MFKCVQ-----------SHPSAKGMWNKSFPHYDELSTVFVKEEQSQDCHTLEVHQTKSP 125
            FKCVQ           SHP+AKGMW K FPHYD+LS VF K+    DCHT EV QT+SP
Sbjct: 93  EFKCVQVEREIFDLWVRSHPNAKGMWKKPFPHYDDLSAVFGKDR--ADCHTPEVRQTESP 152

Query: 126 LNQDGIDEEPTEQSIGRAM----------------------YLPSHLE-ADTYMGRLASW 185
           LNQD IDEEP EQS GRA                        + S +E   T+MGRLASW
Sbjct: 153 LNQDEIDEEPAEQSTGRASVPTESSRGSKRKRSSFQVEMIDIVKSTVEMQSTHMGRLASW 212

Query: 186 QKENYELEFGRRKEVVNAIYNINGLNEDDQVTLIDLFVIDIQKINCFLGVLEHARKRYCL 219
           Q E YELE    KEVVNAIYNI+ L E+DQVTLIDL V DIQK +CFL V EHARKRYCL
Sbjct: 213 QNEKYELEL---KEVVNAIYNIDDLEENDQVTLIDLIVTDIQKTDCFLAVPEHARKRYCL 272

BLAST of CmUC08G147070 vs. NCBI nr
Match: XP_038895773.1 (uncharacterized protein LOC120083935 [Benincasa hispida])

HSP 1 Score: 273.9 bits (699), Expect = 1.2e-69
Identity = 149/228 (65.35%), Postives = 162/228 (71.05%), Query Frame = 0

Query: 6   RSDNGTFRPGYLQHLERMLHEKVPGCALNQNIIECKVRSLKKQYNVVSEMLSQSGFGWNE 65
           RSDNGTFR  YLQHLER+ HEKV GCALNQN IECKVRSLKKQ N VSEMLSQSGF WNE
Sbjct: 71  RSDNGTFRLEYLQHLERIHHEKVLGCALNQNTIECKVRSLKKQCNAVSEMLSQSGFDWNE 130

Query: 66  MFKCVQ-----------SHPSAKGMWNKSFPHYDELSTVFVK----EEQSQDCHTLEVHQ 125
            FKCVQ           SHP+AKGMWNK FPHYD+LSTVF K     + S+D + +  + 
Sbjct: 131 EFKCVQVEREIFDPWVRSHPNAKGMWNKPFPHYDDLSTVFGKYKAVGQSSEDPYVMTTNA 190

Query: 126 TKSPLNQDGIDEEPTEQSIGRAMYLPSHLEADTYMGRLASWQKENYELEFGRRKEVVNAI 185
            +         E   E  +G       H    T+MGRLASWQKE YELEFGRRKEVVNAI
Sbjct: 191 FR---------EFEDEIRLGSQ---DCHTPESTHMGRLASWQKEKYELEFGRRKEVVNAI 250

Query: 186 YNINGLNEDDQVTLIDLFVIDIQKINCFLGVLEHARKRYCLCLLGRNM 219
           YNI+GL+EDDQVTLIDL V DIQK NCFL V EHARKRYCL LLGRNM
Sbjct: 251 YNIDGLDEDDQVTLIDLLVTDIQKTNCFLAVPEHARKRYCLRLLGRNM 286

BLAST of CmUC08G147070 vs. NCBI nr
Match: XP_038877407.1 (uncharacterized protein LOC120069696 [Benincasa hispida])

HSP 1 Score: 251.1 bits (640), Expect = 8.5e-63
Identity = 146/247 (59.11%), Postives = 158/247 (63.97%), Query Frame = 0

Query: 6   RSDNGTFRPGYLQHLERMLHEKVPGCALNQNIIECKVRSLKKQYNVVSEMLSQSGFGWNE 65
           RS  G F       L      K P  ALNQN IECKVRSLKKQYN +SEMLSQSGF WNE
Sbjct: 22  RSIMGRFDQDTYNTLSEFCMIKCP--ALNQNTIECKVRSLKKQYNAISEMLSQSGFDWNE 81

Query: 66  MFKCVQ-----------SHPSAKGMWNKSFPHYDELSTVFVKEEQSQDCHTLEVHQTKSP 125
            FKCVQ           SHP+AKGMWNK FPHYD+LST         DCHT EV Q +S 
Sbjct: 82  EFKCVQVEREIFNLWVRSHPNAKGMWNKPFPHYDDLST---------DCHTPEVCQIESL 141

Query: 126 LNQDGIDEEPTEQSIGRAM----------------------YLPSHLEA-DTYMGRLASW 185
           LNQD IDEEPTEQS GR                         + S +E   T+MGRLASW
Sbjct: 142 LNQDEIDEEPTEQSTGRTSIPVESSRGSKRKRSSFQVEMIDIMRSTVEMHSTHMGRLASW 201

Query: 186 QKENYELEFGRRKEVVNAIYNINGLNEDDQVTLIDLFVIDIQKINCFLGVLEHARKRYCL 219
           QK+ YELEFGR+KEVVNAIYNI+GL+ED QVTLIDL V DIQK +CFL V EHA KRYCL
Sbjct: 202 QKKKYELEFGRQKEVVNAIYNIDGLDEDTQVTLIDLVVTDIQKTDCFLAVPEHAWKRYCL 257

BLAST of CmUC08G147070 vs. NCBI nr
Match: XP_038892629.1 (uncharacterized protein At2g29880-like [Benincasa hispida])

HSP 1 Score: 201.4 bits (511), Expect = 7.7e-48
Identity = 103/147 (70.07%), Postives = 110/147 (74.83%), Query Frame = 0

Query: 6   RSDNGTFRPGYLQHLERMLHEKVPGCALNQNIIECKVRSLKKQYNVVSEMLSQSGFGWNE 65
           R DNGTFRPGYLQHLE++LHEKVPGCALN N IECKVRSLKKQYN VSEMLSQSG GWNE
Sbjct: 79  RFDNGTFRPGYLQHLEQILHEKVPGCALNHNTIECKVRSLKKQYNAVSEMLSQSGLGWNE 138

Query: 66  MFKCVQ-----------SHPSAKGMWNKSFPHYDELSTVFVKEE---QS------QDCHT 125
            FKCV            SHP+AK MWNK FPHYD+LST+F K+    QS       DCHT
Sbjct: 139 EFKCVHVEREIFDLWVWSHPNAKRMWNKPFPHYDDLSTIFGKDRAVGQSSENPYVMDCHT 198

Query: 126 LEVHQTKSPLNQDGIDEEPTEQSIGRA 133
            EV QT+SPLNQD IDEEP EQS GRA
Sbjct: 199 PEVRQTESPLNQDEIDEEPAEQSTGRA 225

BLAST of CmUC08G147070 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.2e-23
Identity = 83/269 (30.86%), Postives = 125/269 (46.47%), Query Frame = 0

Query: 6   RSDNGTFRPGYLQHLERMLHEKVPGCALNQ-NIIECKVRSLKKQYNVVSEML--SQSGFG 65
           RSDNGTF+PGYL  L+RM+ EK+PG  + + + I+C V+SLKK Y+ ++EM   S SGFG
Sbjct: 34  RSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFG 93

Query: 66  WNEMFKC-----------VQSHPSAKGMWNKSFPHYDELSTVFVKEE---------QSQD 125
           WNE F+C           ++SHP+AKG+ +KSFP+YD+LS VF K+           +  
Sbjct: 94  WNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVG 153

Query: 126 CHTLEVHQTKSPLNQDGIDEEPTEQSIGRAM----------------------------- 185
            +   +     PL     ++ PT  S G  M                             
Sbjct: 154 SNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGS 213

Query: 186 -------YLPSHLE-ADTYMGRLASWQKENYELEFGRRKEVVNAIYNINGLNEDDQVTLI 215
                   + S +E  +  +  +A W KE   +E   R +VV  + +I  L   D+  L+
Sbjct: 214 ERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLM 273

BLAST of CmUC08G147070 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.2e-23
Identity = 83/269 (30.86%), Postives = 125/269 (46.47%), Query Frame = 0

Query: 6   RSDNGTFRPGYLQHLERMLHEKVPGCALNQ-NIIECKVRSLKKQYNVVSEML--SQSGFG 65
           RSDNGTF+PGYL  L+RM+ EK+PG  + + + I+C V+SLKK Y+ ++EM   S SGFG
Sbjct: 34  RSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFG 93

Query: 66  WNEMFKC-----------VQSHPSAKGMWNKSFPHYDELSTVFVKEE---------QSQD 125
           WNE F+C           ++SHP+AKG+ +KSFP+YD+LS VF K+           +  
Sbjct: 94  WNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFPNVG 153

Query: 126 CHTLEVHQTKSPLNQDGIDEEPTEQSIGRAM----------------------------- 185
            +   +     PL     ++ PT  S G  M                             
Sbjct: 154 SNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSKRKRGS 213

Query: 186 -------YLPSHLE-ADTYMGRLASWQKENYELEFGRRKEVVNAIYNINGLNEDDQVTLI 215
                   + S +E  +  +  +A W KE   +E   R +VV  + +I  L   D+  L+
Sbjct: 214 ERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLM 273

BLAST of CmUC08G147070 vs. ExPASy TrEMBL
Match: A0A5A7U216 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G001370 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 6.0e-22
Identity = 76/246 (30.89%), Postives = 118/246 (47.97%), Query Frame = 0

Query: 6   RSDNGTFRPGYLQHLERMLHEKVPGCALNQNIIECKVRSLKKQYNVVSEMLSQ--SGFGW 65
           RSDNGTFRPGYL  L RM+  K+PGC ++ + I+ +++ +K+ ++ ++EM     SGFGW
Sbjct: 34  RSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPNCSGFGW 93

Query: 66  NEMFKCV---------QSHPSAKGMWNKSFPHYDELSTVFVKEEQSQD-CHTLEVHQTKS 125
           N+  KC+          SHP+AKG+ NKSF HYDELS VF K+  +     +     +  
Sbjct: 94  NDEKKCIIAEKEVFDDWSHPAAKGLLNKSFVHYDELSYVFGKDPATGGRAESFTDIGSND 153

Query: 126 PLNQDGIDEEPTEQSIGRAMYLPS-HLEADTYM-GRLASWQKENYELEFGR--------- 185
           P   D    +    +    MY P  ++  D  M  R A W      +E+G          
Sbjct: 154 PAGYDAFAADAVPDTDFPPMYSPGLNMSPDDLMETRTARWDIVRTAVEYGNEQLHRIAEW 213

Query: 186 -----------RKEVVNAIYNINGLNEDDQVTLIDLFVIDIQKINCFLGVLEHARKRYCL 218
                      R+E+V  +  I  L   D+  L+ + + ++  +  FL V ++    YC 
Sbjct: 214 PILQRQDATQTRQEIVRQLEAIPELTLMDRCRLMRIIMRNVDDMKAFLEVPDNMNYPYCS 273

BLAST of CmUC08G147070 vs. ExPASy TrEMBL
Match: A0A5D3CH30 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold66G00140 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.3e-21
Identity = 72/237 (30.38%), Postives = 119/237 (50.21%), Query Frame = 0

Query: 6   RSDNGTFRPGYLQHLERMLHEKVPGCALNQNIIECKVRSLKKQYNVVSEMLSQ--SGFGW 65
           RSDNGTFRPGYL  L RM+  K+PGC ++ + I+ +++ +K+ ++ ++EM     SGFGW
Sbjct: 30  RSDNGTFRPGYLNQLARMMAFKIPGCNIHASTIDSRIKLMKRMFHALAEMRGPNCSGFGW 89

Query: 66  NEMFKCV---------QSHPSAKGMWNKSFPHYDELSTVFVKEE-------------QSQ 125
           N+  KC+          SHP+ KG+ NKSF HYDELS VF K+               + 
Sbjct: 90  NDEKKCIVAEKEVFDDWSHPTVKGLLNKSFVHYDELSYVFGKDRATGGRAESFADIGSND 149

Query: 126 DCHTLEVHQTKSPLNQDGIDEEPTEQSIGRAMYLPSHLE-ADTYMGRLASWQKENYELEF 185
              T  V + ++     G   + T  +I     + + +E  +  + R+A W     +   
Sbjct: 150 PAGTARVSERRNV--SSGSKRKRTGHAIDSGDIVRTAIEYGNEQLHRIAEWLILQRQDAT 209

Query: 186 GRRKEVVNAIYNINGLNEDDQVTLIDLFVIDIQKINCFLGVLEHARKRYCLCLLGRN 218
             R+E+V  +  I  L   D+  L+ + + ++  +  FL V ++ +  YC  +L  N
Sbjct: 210 QTRQEIVRQLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDNMKYPYCSIILQEN 264

BLAST of CmUC08G147070 vs. ExPASy TrEMBL
Match: A0A6V7P4Z9 (Myb_DNA-bind_3 domain-containing protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS9081 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.3e-20
Identity = 79/260 (30.38%), Postives = 118/260 (45.38%), Query Frame = 0

Query: 6   RSDNGTFRPGYLQHLERMLHEKVPGCAL-NQNIIECKVRSLKKQYNVVSEML--SQSGFG 65
           R+DNGTFR GYLQ LER +HEK+P C L     IE + +  K+QYN + EML  S SGFG
Sbjct: 65  RADNGTFRNGYLQQLERWMHEKIPDCELKGVPHIESRFKLWKRQYNAIFEMLGPSASGFG 124

Query: 66  WNEMFKCVQ-----------SHPSAKGMWNKSFPHYDELSTVFVK--------EEQSQDC 125
           W++  KCV+           SHP+A G+  KSFP+++ELS VF K        E  +   
Sbjct: 125 WSDKNKCVECDKNVYDNWVKSHPNAVGLRGKSFPYFEELSIVFGKDRATGIAAESPADAV 184

Query: 126 HTLEVHQTKSPLNQDGIDEE-----------PTEQSIGRAMYLPSHLEA--DTYMGRLAS 185
             +E  +T    +    DEE           PT  S G++        +  D  +    +
Sbjct: 185 ANIEGEETNQRASAQNPDEEMAIADESSGLGPTNSSAGQSRKTRKRRSSATDDSINESFN 244

Query: 186 WQKENYELEFG---------------------RRKEVVNAIYNINGLNEDDQVTLIDLFV 210
               + E  FG                     R++++   +  + GL + D++   D+ +
Sbjct: 245 ATLRSIESMFGNASESISKLAGCFQFMATDAIRKEKLFEELLKVEGLVDKDRMIAYDILI 304

BLAST of CmUC08G147070 vs. TAIR 10
Match: AT4G02550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 370 Blast hits to 300 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 10; Plants - 354; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 9.6e-04
Identity = 34/123 (27.64%), Postives = 55/123 (44.72%), Query Frame = 0

Query: 41  KVRSLKKQYNVVSEMLSQSGFGWN---EMFKC---------VQSHPSAKGMWNKSFPHYD 100
           +++++KK+Y V+ ++LS+ GF WN   +M  C         +  +P AK    K    Y+
Sbjct: 76  RLKTIKKRYRVMRDILSRDGFWWNSSTKMIDCESDELWRRYIAVNPDAKAFRGKQIEMYE 135

Query: 101 ELSTVF-----------VKEEQS---QDCHTLEVHQTKSPL--NQDGIDEEPTEQSIGRA 136
           EL TV            VK+E S    D    E      PL  +++  D + TE   G +
Sbjct: 136 ELRTVCGDYQTPGKYNKVKKESSHHLNDVKQFEEDSVSFPLGSSEEHSDTDGTESYAGAS 195

BLAST of CmUC08G147070 vs. TAIR 10
Match: AT4G02550.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 9.6e-04
Identity = 34/123 (27.64%), Postives = 55/123 (44.72%), Query Frame = 0

Query: 41  KVRSLKKQYNVVSEMLSQSGFGWN---EMFKC---------VQSHPSAKGMWNKSFPHYD 100
           +++++KK+Y V+ ++LS+ GF WN   +M  C         +  +P AK    K    Y+
Sbjct: 91  RLKTIKKRYRVMRDILSRDGFWWNSSTKMIDCESDELWRRYIAVNPDAKAFRGKQIEMYE 150

Query: 101 ELSTVF-----------VKEEQS---QDCHTLEVHQTKSPL--NQDGIDEEPTEQSIGRA 136
           EL TV            VK+E S    D    E      PL  +++  D + TE   G +
Sbjct: 151 ELRTVCGDYQTPGKYNKVKKESSHHLNDVKQFEEDSVSFPLGSSEEHSDTDGTESYAGAS 210

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038896380.11.2e-8067.21uncharacterized protein LOC120084641 [Benincasa hispida][more]
XP_038887234.14.2e-7865.99uncharacterized protein LOC120077425 [Benincasa hispida][more]
XP_038895773.11.2e-6965.35uncharacterized protein LOC120083935 [Benincasa hispida][more]
XP_038877407.18.5e-6359.11uncharacterized protein LOC120069696 [Benincasa hispida][more]
XP_038892629.17.7e-4870.07uncharacterized protein At2g29880-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U0H74.2e-2330.86Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3B4L34.2e-2330.86uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=... [more]
A0A5A7U2166.0e-2230.89Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CH302.3e-2130.38Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6V7P4Z94.3e-2030.38Myb_DNA-bind_3 domain-containing protein OS=Ananas comosus var. bracteatus OX=29... [more]
Match NameE-valueIdentityDescription
AT4G02550.19.6e-0427.64unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G02550.39.6e-0427.64unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024752Myb/SANT-like domainPFAMPF12776Myb_DNA-bind_3coord: 4..73
e-value: 5.3E-6
score: 27.3
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 6..214

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC08G147070.1CmUC08G147070.1mRNA