CmUC07G130790 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGATACCAACTCCCGCCGCAAATCCAAAATGAAACCTTCAGCAACCACCACCACTACCACTACAACCACCACCAGCGACGACGGCCAAAACGACGGCTTCCCTGACGAATACGACGCCGAGGTGTGGAACTCCTTTGACCAGACCTTCCGGCAGGTCCAATCCGTGCTGGACCGGAACAGAACACTGATTCAACAGGTAAACGAGAATCACCAATCTCGAATTCCGAGCAACATGGTCGACAACGTTGCTCTCATCCAAGAACTCAATGGAAACATCTCTAAAGTTGTCTCCATGTACTCTGATTTCTCCTCTGATTTCTCCACTGCCTTCCACAACCACAAACCCAGAAATGGCAAAAGAGGCAGCAGCAACCCAAATGCTTGA ATGGCCGATACCAACTCCCGCCGCAAATCCAAAATGAAACCTTCAGCAACCACCACCACTACCACTACAACCACCACCAGCGACGACGGCCAAAACGACGGCTTCCCTGACGAATACGACGCCGAGGTGTGGAACTCCTTTGACCAGACCTTCCGGCAGGTCCAATCCGTGCTGGACCGGAACAGAACACTGATTCAACAGGTAAACGAGAATCACCAATCTCGAATTCCGAGCAACATGGTCGACAACGTTGCTCTCATCCAAGAACTCAATGGAAACATCTCTAAAGTTGTCTCCATGTACTCTGATTTCTCCTCTGATTTCTCCACTGCCTTCCACAACCACAAACCCAGAAATGGCAAAAGAGGCAGCAGCAACCCAAATGCTTGA ATGGCCGATACCAACTCCCGCCGCAAATCCAAAATGAAACCTTCAGCAACCACCACCACTACCACTACAACCACCACCAGCGACGACGGCCAAAACGACGGCTTCCCTGACGAATACGACGCCGAGGTGTGGAACTCCTTTGACCAGACCTTCCGGCAGGTCCAATCCGTGCTGGACCGGAACAGAACACTGATTCAACAGGTAAACGAGAATCACCAATCTCGAATTCCGAGCAACATGGTCGACAACGTTGCTCTCATCCAAGAACTCAATGGAAACATCTCTAAAGTTGTCTCCATGTACTCTGATTTCTCCTCTGATTTCTCCACTGCCTTCCACAACCACAAACCCAGAAATGGCAAAAGAGGCAGCAGCAACCCAAATGCTTGA MADTNSRRKSKMKPSATTTTTTTTTTSDDGQNDGFPDEYDAEVWNSFDQTFRQVQSVLDRNRTLIQQVNENHQSRIPSNMVDNVALIQELNGNISKVVSMYSDFSSDFSTAFHNHKPRNGKRGSSNPNA Homology
BLAST of CmUC07G130790 vs. NCBI nr
Match: KAA0031907.1 (protein EARLY FLOWERING 4 [Cucumis melo var. makuwa] >TYK27472.1 protein EARLY FLOWERING 4 [Cucumis melo var. makuwa]) HSP 1 Score: 224.9 bits (572), Expect = 3.9e-55 Identity = 118/129 (91.47%), Postives = 123/129 (95.35%), Query Frame = 0
BLAST of CmUC07G130790 vs. NCBI nr
Match: XP_008463236.2 (PREDICTED: uncharacterized protein LOC103501440 [Cucumis melo]) HSP 1 Score: 224.9 bits (572), Expect = 3.9e-55 Identity = 118/129 (91.47%), Postives = 123/129 (95.35%), Query Frame = 0
BLAST of CmUC07G130790 vs. NCBI nr
Match: XP_038892867.1 (protein EARLY FLOWERING 4-like [Benincasa hispida]) HSP 1 Score: 221.1 bits (562), Expect = 5.6e-54 Identity = 121/131 (92.37%), Postives = 124/131 (94.66%), Query Frame = 0
BLAST of CmUC07G130790 vs. NCBI nr
Match: XP_004149248.1 (protein EARLY FLOWERING 4 [Cucumis sativus]) HSP 1 Score: 220.7 bits (561), Expect = 7.3e-54 Identity = 116/129 (89.92%), Postives = 120/129 (93.02%), Query Frame = 0
BLAST of CmUC07G130790 vs. NCBI nr
Match: KAG6600929.1 (Protein EARLY FLOWERING 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031565.1 Protein EARLY FLOWERING 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 217.2 bits (552), Expect = 8.1e-53 Identity = 115/129 (89.15%), Postives = 121/129 (93.80%), Query Frame = 0
BLAST of CmUC07G130790 vs. ExPASy Swiss-Prot
Match: O04211 (Protein EARLY FLOWERING 4 OS=Arabidopsis thaliana OX=3702 GN=ELF4 PE=1 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 2.0e-22 Identity = 55/90 (61.11%), Postives = 68/90 (75.56%), Query Frame = 0
BLAST of CmUC07G130790 vs. ExPASy Swiss-Prot
Match: O80877 (Protein ELF4-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=EFL1 PE=2 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 4.1e-15 Identity = 43/86 (50.00%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of CmUC07G130790 vs. ExPASy Swiss-Prot
Match: Q8S8F5 (Protein ELF4-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=EFL3 PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.8e-13 Identity = 35/89 (39.33%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of CmUC07G130790 vs. ExPASy Swiss-Prot
Match: Q570U6 (Protein ELF4-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=EFL4 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 2.5e-12 Identity = 36/78 (46.15%), Postives = 53/78 (67.95%), Query Frame = 0
BLAST of CmUC07G130790 vs. ExPASy Swiss-Prot
Match: Q94BS8 (Protein ELF4-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=EFL2 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 7.9e-11 Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = 0
BLAST of CmUC07G130790 vs. ExPASy TrEMBL
Match: A0A5A7SR92 (Protein EARLY FLOWERING 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00230 PE=3 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55 Identity = 118/129 (91.47%), Postives = 123/129 (95.35%), Query Frame = 0
BLAST of CmUC07G130790 vs. ExPASy TrEMBL
Match: A0A1S3CIT1 (uncharacterized protein LOC103501440 OS=Cucumis melo OX=3656 GN=LOC103501440 PE=3 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.9e-55 Identity = 118/129 (91.47%), Postives = 123/129 (95.35%), Query Frame = 0
BLAST of CmUC07G130790 vs. ExPASy TrEMBL
Match: A0A0A0KM35 (Elf4 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G202370 PE=3 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 3.5e-54 Identity = 116/129 (89.92%), Postives = 120/129 (93.02%), Query Frame = 0
BLAST of CmUC07G130790 vs. ExPASy TrEMBL
Match: A0A6J1GYX8 (protein EARLY FLOWERING 4-like OS=Cucurbita moschata OX=3662 GN=LOC111458427 PE=3 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 2.5e-52 Identity = 114/129 (88.37%), Postives = 121/129 (93.80%), Query Frame = 0
BLAST of CmUC07G130790 vs. ExPASy TrEMBL
Match: A0A6J1IH33 (protein EARLY FLOWERING 4-like OS=Cucurbita maxima OX=3661 GN=LOC111477159 PE=3 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 4.3e-52 Identity = 113/129 (87.60%), Postives = 120/129 (93.02%), Query Frame = 0
BLAST of CmUC07G130790 vs. TAIR 10
Match: AT2G40080.1 (Protein of unknown function (DUF1313) ) HSP 1 Score: 106.7 bits (265), Expect = 1.4e-23 Identity = 55/90 (61.11%), Postives = 68/90 (75.56%), Query Frame = 0
BLAST of CmUC07G130790 vs. TAIR 10
Match: AT2G29950.1 (ELF4-like 1 ) HSP 1 Score: 82.4 bits (202), Expect = 2.9e-16 Identity = 43/86 (50.00%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of CmUC07G130790 vs. TAIR 10
Match: AT2G06255.1 (ELF4-like 3 ) HSP 1 Score: 75.9 bits (185), Expect = 2.7e-14 Identity = 35/89 (39.33%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of CmUC07G130790 vs. TAIR 10
Match: AT1G17455.1 (ELF4-like 4 ) HSP 1 Score: 73.2 bits (178), Expect = 1.8e-13 Identity = 36/78 (46.15%), Postives = 53/78 (67.95%), Query Frame = 0
BLAST of CmUC07G130790 vs. TAIR 10
Match: AT1G17455.2 (ELF4-like 4 ) HSP 1 Score: 73.2 bits (178), Expect = 1.8e-13 Identity = 36/78 (46.15%), Postives = 53/78 (67.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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