Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGAAGTAAAGGCGAAGCAGTATTCGATTCACTGAATCTGAATCCGCAGCTCTTCATTAATGAAGCTCTCAATATTGTCGACGATTTGCTTGATGACGCTTTCGATTTCTATCAATCGTATTGTTCTTTCTGTTTCCATCTCTTCAACATAGGTTTTCAATTTTGTTCGGTTAATTTTATTGATTCTTGTCAATTCCTTTTCCCTTCAGACAAGCATCGGCCGCCTTGAAGACCGAGGGCTCCGACAGATCCCAGGATCTTACCCTGGTAAGGTTTAATTTGTATTATATTACTTGGCATATTCTTATCAGCCGTTAATTTCTGATTTCTTAAGTTTGTGCTCTTAAGCACTTCTTTGAATTGTTCCGATTTTCTTTGAACAAAATTGTTTATTTGCCTCGTTTCTGTAGGGAATATCGCGAGTCCGAGCGTTGGTCCAATTGGGTCTGGATAAGCGGTTGGCCATGTGGGAGAAGTACTGTCTCAATCACTGTTTTTCAGTTCCTGAAGGTTTTTCTTTACCCTCAAATGTAGGTTTTTCTTCTACTCTTTCTGTGATAAGGCTCCGGTGCCCAAGGATAAAAATATCGAAGTCCGTATCAGTATCGAAATTTCAAGTAATAGTTTATCAATTGAATATCAATATCGACAGATATTTTTGTGTAAATCAATAAGTTTATCCAAAAAAAAAAAATTAAATTAATAATTAAGTTATTTTTGCTTTCAAAGAAGTTGTAGTTCTTATTGAGATTAATAGATGACAGCTTCTTATGTTTTTTATATATTTATAAAAGATACCGAGATGTCTAAGAACCCTTTATACCAATGTCAAATCTTCCTATTTATAGATATATCAACATATCAACAAATAATTGAAACCTTGTCTGTGCTTTGTTACGTGAAGTTGCTCTATTAGTGTTGTTTTTATGACTGAATTAGTGGCCCTCTATGTCCGAATCATTTCACAAGCGATTAATAATTGAGTATGTAAAATGGCTGCTTGTTGATTTTGCGAGTTTCCCACTTCTTGTGTACTGATTAGAGAGCTTCCTCAAATTTTGGTTCTGGGGCGAATAAATTTTTGGAACTTTGGAGAAATGTGCATCATCAACTTTCAAGTTTTTTACAAGATATACTCATTGTTTAGATGCAGTTTCGAGTTTCCATATTTTCTGACCTTAGAGCTTGCACATTTTGTTTGCTATAAGTCAATGTGGTTCCACTGTCACTAGAACTATGGTCATGATGGTAAAAGATTGTTTTTAGCTCTAAAAGGGAATGTAAGCAAATGTCTGCAGAATTTTTTAGAAAATCTGTCGTTGGTGCATCATGGCTTTTCTTTTTCAATCATTTTTTAAAGTCTAAACTATGTGAATTCCAGTTCGACTCCTTTCATTTTGAACCAATATAGTCACTTGGGGTTGGGCAATCTCTGTCTGTTTCACTGGCATCTCAATCGAATCTGCGATATCTTATTGTCAAGTTGCTAAATTATCAATGGTTCCCATATTCTGTTTGTGAACTTTGAGTTATGGTTAATTGAGTCTATGTATTCTCTTACTACTTTTTCTTTTTTCTAATGCAATAAACATATTTCTGATTCAGATCTAAATATTTTCTTTAAGTTGTCTTAGGATGAATCACCTGGTGTCACTTCAATAAGTCATGACTATGACGTGGATCTGGATACAGAGTTAGATTTTTTGAGGAATAAGCTCTCTGAGGTATTGAGTGTGTCGTATGTTTATTACTTTTGTGTTTATGTATATCATATTTCATGAGGAAATGTATTTTTCAGGCCAGAAAAGAGAATATTGTATTGAGCCAAGAGCTACAAGCTTTGGAAAGGCAAACTGCTTCCAGTAACTCCCAAATTAATCATTTCAACGAAGCATTACAACTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGGTAATTAAATTGTGCTTAATTAAAATCATTTTTCTCTTCCTGCACTCCTGGGTTTACTTGCGCCCTACTCTACTAGTATACTCATGAAGGCATACTCGAAATGAAATATACAAATAATGTATGAAGCTGTTTTTTCTTATAATGAACCTTTATTGTCATAGTCAGCTTGGTAGAGCAAAGTTTCTGTAAACACTAACCTTCTCTCTGACGGATCAATCTGGCCTGCATATCTCATGGTGACACAAATTCTAATAGTTCCAAATGATACTTTTTATTGAACACCTGCAAAATCACTTCATTTAGGCAATTTTTAGATTACCCTAAAGTAAATTCTGGTAGTCCCATTTTCTGTTGTCCATTCCATAAAAGAGGAACTTCAGTATGTGAATAAGGCAATTTATTTTCCTATTTTCATTTTGAAGGCCACTTGGACAAAATTTATTCACTAGTATTAAATTTCATTGTACTGAAACTTTAACGGTTGGCTGGTCATTTGGGGTTTGTGCTATTTTGTGGGATATTTGGGAGAAGACAAATAACAAAGTGTTTAGAGCTGTGGCTGAACCATGGTGATGTTTGGTCCTTGGTGAGGTTTCATGTTTCTCTTTAGAATTCAGTTTCAAAAACCTTTTGTAACCATCCTCTAGATAGTGTCTTATTTAGTTGGAAACCCTTCCTATAGAGGGGTTTTGCAGGCTTGTCCTTTTTGTTGTCTTGTATTCTTCATTTTTTATCTATAAAAACCGTTTTCCCTATCAAACTTCAATGGTTGGCAAGTTAAAGCTGTTCATGATTTTAGGAAGCAGACTTCTTATGCATATCAACTTCTTGCAGAAATGATGGGAACTGCATCGGAGCTACGAGCGAAAATAGGAAAGCTGAAGAAAAGGGGGATGGAGGAAGCCAAGCTCAGTAAAGTAGAGAAGGTTCATACAAACGGAGACATCTCTCACCATCACAATGGTAGTAGGATTTTCAAGCTACTTTATTATCAATCAAGCTCATTTTAGCTTTCTGGAAGTTGAATTTCATCTCACATGCTGGTTGATACTTGTTTCTGTTCTGTAGGTTTCTCTAATGCTAAGCTGGATGACATTCAAGAATTCTTAGCTGATTTGAAGACCCTTTGA
mRNA sequence
ATGGAAGGAAGTAAAGGCGAAGCAGTATTCGATTCACTGAATCTGAATCCGCAGCTCTTCATTAATGAAGCTCTCAATATTGTCGACGATTTGCTTGATGACGCTTTCGATTTCTATCAATCACAAGCATCGGCCGCCTTGAAGACCGAGGGCTCCGACAGATCCCAGGATCTTACCCTGGGAATATCGCGAGTCCGAGCGTTGGTCCAATTGGGTCTGGATAAGCGGTTGGCCATGTGGGAGAAGTTTTTCTTCTACTCTTTCTGTGATAAGGCTCCGGTGCCCAAGGATAAAAATATCGAAGATGAATCACCTGGTGTCACTTCAATAAGTCATGACTATGACGTGGATCTGGATACAGAGTTAGATTTTTTGAGGAATAAGCTCTCTGAGGCCAGAAAAGAGAATATTGTATTGAGCCAAGAGCTACAAGCTTTGGAAAGGCAAACTGCTTCCAGTAACTCCCAAATTAATCATTTCAACGAAGCATTACAACTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGAAATGATGGGAACTGCATCGGAGCTACGAGCGAAAATAGGAAAGCTGAAGAAAAGGGGGATGGAGGAAGCCAAGCTCAGTAAAGTAGAGAAGGTTCATACAAACGGAGACATCTCTCACCATCACAATGGTTTCTCTAATGCTAAGCTGGATGACATTCAAGAATTCTTAGCTGATTTGAAGACCCTTTGA
Coding sequence (CDS)
ATGGAAGGAAGTAAAGGCGAAGCAGTATTCGATTCACTGAATCTGAATCCGCAGCTCTTCATTAATGAAGCTCTCAATATTGTCGACGATTTGCTTGATGACGCTTTCGATTTCTATCAATCACAAGCATCGGCCGCCTTGAAGACCGAGGGCTCCGACAGATCCCAGGATCTTACCCTGGGAATATCGCGAGTCCGAGCGTTGGTCCAATTGGGTCTGGATAAGCGGTTGGCCATGTGGGAGAAGTTTTTCTTCTACTCTTTCTGTGATAAGGCTCCGGTGCCCAAGGATAAAAATATCGAAGATGAATCACCTGGTGTCACTTCAATAAGTCATGACTATGACGTGGATCTGGATACAGAGTTAGATTTTTTGAGGAATAAGCTCTCTGAGGCCAGAAAAGAGAATATTGTATTGAGCCAAGAGCTACAAGCTTTGGAAAGGCAAACTGCTTCCAGTAACTCCCAAATTAATCATTTCAACGAAGCATTACAACTATATGAGCAAAATTCTGTGAATGAGATGTTCCAGGAAATGATGGGAACTGCATCGGAGCTACGAGCGAAAATAGGAAAGCTGAAGAAAAGGGGGATGGAGGAAGCCAAGCTCAGTAAAGTAGAGAAGGTTCATACAAACGGAGACATCTCTCACCATCACAATGGTTTCTCTAATGCTAAGCTGGATGACATTCAAGAATTCTTAGCTGATTTGAAGACCCTTTGA
Protein sequence
MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTLGISRVRALVQLGLDKRLAMWEKFFFYSFCDKAPVPKDKNIEDESPGVTSISHDYDVDLDTELDFLRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMMGTASELRAKIGKLKKRGMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL
Homology
BLAST of CmUC06G123530 vs. NCBI nr
Match:
XP_038879945.1 (protein MIS12 homolog [Benincasa hispida])
HSP 1 Score: 389.0 bits (998), Expect = 2.9e-104
Identity = 207/240 (86.25%), Postives = 217/240 (90.42%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGEAVFDSLNLNPQLFINEALNIVDDL+DDAF FYQSQASA LKTEGSDRSQDLTL
Sbjct: 31 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLVDDAFGFYQSQASATLKTEGSDRSQDLTL 90
Query: 61 GISRVRALVQLGLDKRLAMWEKFFFYSFCDKAPVPKDKNIEDESPGVTSISHDYDVDLDT 120
GISRVRALVQLGLDKRLAMWEK+ + C P D+SPGVTSISHDYDV LDT
Sbjct: 91 GISRVRALVQLGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDDSPGVTSISHDYDVGLDT 150
Query: 121 ELDFLRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMM 180
ELDFLRNKLSE RKENIVL+QELQALERQTA+SNSQINHFNEALQLYEQNSVNEMFQEMM
Sbjct: 151 ELDFLRNKLSEVRKENIVLNQELQALERQTATSNSQINHFNEALQLYEQNSVNEMFQEMM 210
Query: 181 GTASELRAKIGKLKKRGMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL 240
GTASELRAKIGKLKKR MEE+KL+KVEKVHTNGDISH+HNG SNAKLDDI+ FL DLKTL
Sbjct: 211 GTASELRAKIGKLKKRRMEESKLTKVEKVHTNGDISHYHNGLSNAKLDDIKIFLDDLKTL 269
BLAST of CmUC06G123530 vs. NCBI nr
Match:
KAA0058004.1 (Centromere protein Mis12 [Cucumis melo var. makuwa] >TYK28378.1 Centromere protein Mis12 [Cucumis melo var. makuwa])
HSP 1 Score: 380.9 bits (977), Expect = 7.9e-102
Identity = 201/240 (83.75%), Postives = 217/240 (90.42%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE+VF+SLNLNPQLFINEALN VDDL+DDAFDFYQSQASAALKTEGSDRSQDLTL
Sbjct: 1 MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASAALKTEGSDRSQDLTL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKFFFYSFCDKAPVPKDKNIEDESPGVTSISHDYDVDLDT 120
GIS+VRALVQLGLDKRLAMWEK+ + C P DESPGVTSI+HD DVDLDT
Sbjct: 61 GISQVRALVQLGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPGVTSINHDQDVDLDT 120
Query: 121 ELDFLRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMM 180
ELD LRNKLSE RKENIVL+QELQALERQTASSNSQI+HFNEALQLYEQ+SVN+MFQEM+
Sbjct: 121 ELDLLRNKLSEVRKENIVLNQELQALERQTASSNSQISHFNEALQLYEQSSVNDMFQEMI 180
Query: 181 GTASELRAKIGKLKKRGMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL 240
TASELRAKIGK+KKR EEAKL+KVEKVHTNGDISHHHNGFSNAKLDDIQEFL+DLK +
Sbjct: 181 KTASELRAKIGKMKKRRTEEAKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSDLKKI 239
BLAST of CmUC06G123530 vs. NCBI nr
Match:
XP_023515499.1 (protein MIS12 homolog isoform X2 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101
Identity = 202/242 (83.47%), Postives = 215/242 (88.84%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL+L
Sbjct: 1 MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLSL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKFFFYSFCDKAPVPKDKNIEDESPGVTSISHD--YDVDL 120
GISRVR VQ GLDKRLAMWEK+ + C P DESP VTS+S D YDVDL
Sbjct: 61 GISRVRTFVQSGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDL 120
Query: 121 DTELDFLRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQE 180
DTELDFLRNKLSE RKEN+VL+QELQALERQTASSNSQ+N FNEALQLYEQNSVNEMFQE
Sbjct: 121 DTELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQE 180
Query: 181 MMGTASELRAKIGKLKKRGMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLK 240
MMGTASELRAKIGKLKKR MEE+KL+KVEK+HTNGDISHHH GFSNAKLDDIQEFLADLK
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLK 240
BLAST of CmUC06G123530 vs. NCBI nr
Match:
KAA0058032.1 (Centromere protein Mis12 [Cucumis melo var. makuwa])
HSP 1 Score: 378.3 bits (970), Expect = 5.1e-101
Identity = 199/240 (82.92%), Postives = 216/240 (90.00%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE+VF+SLNLNPQLFINEALN VDDL+DDAFDFYQSQASA LKTEGSDRSQDLTL
Sbjct: 1 MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASATLKTEGSDRSQDLTL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKFFFYSFCDKAPVPKDKNIEDESPGVTSISHDYDVDLDT 120
GIS+VRALVQLGLDKRLAMWEK+ + C P DESPGVTSI+HD DVDLDT
Sbjct: 61 GISQVRALVQLGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPGVTSINHDQDVDLDT 120
Query: 121 ELDFLRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMM 180
ELD LRNKLSE RKENIVL+QELQALERQTASSNSQI+HFNEALQLYEQ+SVN+MFQEM+
Sbjct: 121 ELDLLRNKLSEVRKENIVLNQELQALERQTASSNSQISHFNEALQLYEQSSVNDMFQEMI 180
Query: 181 GTASELRAKIGKLKKRGMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL 240
TASELR+KIGK+KKR EEAKL+KVEKVHTNGDISHHHNGFSNAKLDDIQEFL+DLK +
Sbjct: 181 KTASELRSKIGKMKKRRTEEAKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSDLKKI 239
BLAST of CmUC06G123530 vs. NCBI nr
Match:
KAG6589575.1 (Protein MIS12-like protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 377.5 bits (968), Expect = 8.7e-101
Identity = 201/242 (83.06%), Postives = 213/242 (88.02%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL L
Sbjct: 1 MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKFFFYSFCDKAPVPKDKNIEDESPGVTSISHD--YDVDL 120
GISRVR VQ GLDKRLAMWEK+ + C P DESP VTS+S D YDVDL
Sbjct: 61 GISRVRTFVQSGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDL 120
Query: 121 DTELDFLRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQE 180
DTELDFLRNKLSE RKEN+VL+QELQALERQTASSNSQ+N FNEALQLYEQNSVNEMFQE
Sbjct: 121 DTELDFLRNKLSEVRKENVVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQE 180
Query: 181 MMGTASELRAKIGKLKKRGMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLK 240
MMGTASELRAKIGKLKKR MEE+KL+KVEK+HTNGDISHHH GFSNAKLDDIQEFLADLK
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDISHHHKGFSNAKLDDIQEFLADLK 240
BLAST of CmUC06G123530 vs. ExPASy Swiss-Prot
Match:
Q2V0Z5 (Protein MIS12 homolog OS=Arabidopsis thaliana OX=3702 GN=MIS12 PE=3 SV=1)
HSP 1 Score: 183.7 bits (465), Expect = 2.4e-45
Identity = 111/248 (44.76%), Postives = 163/248 (65.73%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSD--RSQDL 60
MEGSK EAVFDS+NLNPQ+FINEA+N V+D +D AFDFY AS +LK +GSD +SQ L
Sbjct: 1 MEGSKSEAVFDSMNLNPQIFINEAINSVEDYVDQAFDFYARDASKSLKIKGSDKQKSQAL 60
Query: 61 TLGISRVRALVQLGLDKRLAMWEKFFFYSFCDKAPVPKDKNIEDESPGVTSISHD--YDV 120
+ GI+RVR L+ +D RL +WE + FC P D + +S +S+ D YD+
Sbjct: 61 SNGIARVRGLLLSVIDNRLKLWESYSL-RFCFAVP---DGFVLPKSEESSSVHQDGLYDL 120
Query: 121 DLDTELDFLRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMF 180
+LD ELD LR+KL+ K ++ L ELQALER + S + NEAL+LY+++S++E+F
Sbjct: 121 ELDAELDSLRDKLNVVGKRSVELDSELQALERSSVSRERSLRLVNEALELYDESSMDEIF 180
Query: 181 QEMMGTASELRAKIGKLKKRGMEEAKLSKVEKVHTNGDISHHHNGFS----NAKLDDIQE 240
+EM ASELRA + +LK R M+ ++ +KV++ + +H FS + KL+D+++
Sbjct: 181 KEMTKMASELRASVERLKTRRMKASESAKVKR------LKNHGKEFSAMTFDGKLEDLEK 238
BLAST of CmUC06G123530 vs. ExPASy TrEMBL
Match:
A0A5A7US57 (Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00040 PE=3 SV=1)
HSP 1 Score: 380.9 bits (977), Expect = 3.8e-102
Identity = 201/240 (83.75%), Postives = 217/240 (90.42%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE+VF+SLNLNPQLFINEALN VDDL+DDAFDFYQSQASAALKTEGSDRSQDLTL
Sbjct: 1 MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASAALKTEGSDRSQDLTL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKFFFYSFCDKAPVPKDKNIEDESPGVTSISHDYDVDLDT 120
GIS+VRALVQLGLDKRLAMWEK+ + C P DESPGVTSI+HD DVDLDT
Sbjct: 61 GISQVRALVQLGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPGVTSINHDQDVDLDT 120
Query: 121 ELDFLRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMM 180
ELD LRNKLSE RKENIVL+QELQALERQTASSNSQI+HFNEALQLYEQ+SVN+MFQEM+
Sbjct: 121 ELDLLRNKLSEVRKENIVLNQELQALERQTASSNSQISHFNEALQLYEQSSVNDMFQEMI 180
Query: 181 GTASELRAKIGKLKKRGMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL 240
TASELRAKIGK+KKR EEAKL+KVEKVHTNGDISHHHNGFSNAKLDDIQEFL+DLK +
Sbjct: 181 KTASELRAKIGKMKKRRTEEAKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSDLKKI 239
BLAST of CmUC06G123530 vs. ExPASy TrEMBL
Match:
A0A5A7UQ95 (Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003370 PE=3 SV=1)
HSP 1 Score: 378.3 bits (970), Expect = 2.5e-101
Identity = 199/240 (82.92%), Postives = 216/240 (90.00%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE+VF+SLNLNPQLFINEALN VDDL+DDAFDFYQSQASA LKTEGSDRSQDLTL
Sbjct: 1 MEGSKGESVFNSLNLNPQLFINEALNTVDDLVDDAFDFYQSQASATLKTEGSDRSQDLTL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKFFFYSFCDKAPVPKDKNIEDESPGVTSISHDYDVDLDT 120
GIS+VRALVQLGLDKRLAMWEK+ + C P DESPGVTSI+HD DVDLDT
Sbjct: 61 GISQVRALVQLGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPGVTSINHDQDVDLDT 120
Query: 121 ELDFLRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQEMM 180
ELD LRNKLSE RKENIVL+QELQALERQTASSNSQI+HFNEALQLYEQ+SVN+MFQEM+
Sbjct: 121 ELDLLRNKLSEVRKENIVLNQELQALERQTASSNSQISHFNEALQLYEQSSVNDMFQEMI 180
Query: 181 GTASELRAKIGKLKKRGMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLKTL 240
TASELR+KIGK+KKR EEAKL+KVEKVHTNGDISHHHNGFSNAKLDDIQEFL+DLK +
Sbjct: 181 KTASELRSKIGKMKKRRTEEAKLAKVEKVHTNGDISHHHNGFSNAKLDDIQEFLSDLKKI 239
BLAST of CmUC06G123530 vs. ExPASy TrEMBL
Match:
A0A6J1JME3 (protein MIS12 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=3 SV=1)
HSP 1 Score: 372.5 bits (955), Expect = 1.4e-99
Identity = 200/242 (82.64%), Postives = 211/242 (87.19%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL L
Sbjct: 1 MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKFFFYSFCDKAPVPKDKNIEDESPGVTSISHD--YDVDL 120
GISRVR VQ GLDKRLAMWEK+ + C P DESP VTS+S D YDVDL
Sbjct: 61 GISRVRTFVQSGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDL 120
Query: 121 DTELDFLRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQE 180
DTELDFLR LSE RKENIVL+QELQALERQTASSNSQ+N FNEALQLYEQNSVNEMFQE
Sbjct: 121 DTELDFLRKNLSEVRKENIVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQE 180
Query: 181 MMGTASELRAKIGKLKKRGMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLK 240
MMGTASELRAKIGKLKKR MEE+KL+KVEK+HTN DISHHH GFSNAKLDDIQEFLADLK
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNRDISHHHKGFSNAKLDDIQEFLADLK 240
BLAST of CmUC06G123530 vs. ExPASy TrEMBL
Match:
A0A6J1E0A1 (protein MIS12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429660 PE=3 SV=1)
HSP 1 Score: 372.5 bits (955), Expect = 1.4e-99
Identity = 199/242 (82.23%), Postives = 211/242 (87.19%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL L
Sbjct: 1 MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKFFFYSFCDKAPVPKDKNIEDESPGVTSISHD--YDVDL 120
GISRVR VQ GLDKRLAMWEK+ + C P DESP VTS+S D YDVDL
Sbjct: 61 GISRVRTFVQSGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDL 120
Query: 121 DTELDFLRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQE 180
DTELDFLRNKLSE RKENIVL+QELQALERQ ASSNSQ+N FNEALQLYE+NSVNEMFQE
Sbjct: 121 DTELDFLRNKLSEVRKENIVLNQELQALERQAASSNSQVNRFNEALQLYERNSVNEMFQE 180
Query: 181 MMGTASELRAKIGKLKKRGMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADLK 240
MMGTASELRAKIGKLKKR MEE+KL+KVEK+HTNGD SHHH GFSNAKLDDIQEFLADLK
Sbjct: 181 MMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNGDASHHHKGFSNAKLDDIQEFLADLK 240
BLAST of CmUC06G123530 vs. ExPASy TrEMBL
Match:
A0A6J1JD43 (protein MIS12 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=3 SV=1)
HSP 1 Score: 367.9 bits (943), Expect = 3.3e-98
Identity = 200/243 (82.30%), Postives = 211/243 (86.83%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSDRSQDLTL 60
MEGSKGE VFDSLNLNPQLFINEALNIVDDL+DDAFDFYQ+QASA+LKTEGSDRSQDL L
Sbjct: 1 MEGSKGEEVFDSLNLNPQLFINEALNIVDDLVDDAFDFYQTQASASLKTEGSDRSQDLIL 60
Query: 61 GISRVRALVQLGLDKRLAMWEKFFFYSFCDKAPVPKDKNIEDESPGVTSISHD--YDVDL 120
GISRVR VQ GLDKRLAMWEK+ + C P DESP VTS+S D YDVDL
Sbjct: 61 GISRVRTFVQSGLDKRLAMWEKYCL-NHCFSVPEGFSLPSNDESPVVTSVSRDCLYDVDL 120
Query: 121 DTELDFLRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMFQ- 180
DTELDFLR LSE RKENIVL+QELQALERQTASSNSQ+N FNEALQLYEQNSVNEMFQ
Sbjct: 121 DTELDFLRKNLSEVRKENIVLNQELQALERQTASSNSQVNRFNEALQLYEQNSVNEMFQA 180
Query: 181 EMMGTASELRAKIGKLKKRGMEEAKLSKVEKVHTNGDISHHHNGFSNAKLDDIQEFLADL 240
EMMGTASELRAKIGKLKKR MEE+KL+KVEK+HTN DISHHH GFSNAKLDDIQEFLADL
Sbjct: 181 EMMGTASELRAKIGKLKKRRMEESKLTKVEKIHTNRDISHHHKGFSNAKLDDIQEFLADL 240
BLAST of CmUC06G123530 vs. TAIR 10
Match:
AT5G35520.1 (minichromosome instability 12 (mis12)-like )
HSP 1 Score: 183.7 bits (465), Expect = 1.7e-46
Identity = 111/248 (44.76%), Postives = 163/248 (65.73%), Query Frame = 0
Query: 1 MEGSKGEAVFDSLNLNPQLFINEALNIVDDLLDDAFDFYQSQASAALKTEGSD--RSQDL 60
MEGSK EAVFDS+NLNPQ+FINEA+N V+D +D AFDFY AS +LK +GSD +SQ L
Sbjct: 1 MEGSKSEAVFDSMNLNPQIFINEAINSVEDYVDQAFDFYARDASKSLKIKGSDKQKSQAL 60
Query: 61 TLGISRVRALVQLGLDKRLAMWEKFFFYSFCDKAPVPKDKNIEDESPGVTSISHD--YDV 120
+ GI+RVR L+ +D RL +WE + FC P D + +S +S+ D YD+
Sbjct: 61 SNGIARVRGLLLSVIDNRLKLWESYSL-RFCFAVP---DGFVLPKSEESSSVHQDGLYDL 120
Query: 121 DLDTELDFLRNKLSEARKENIVLSQELQALERQTASSNSQINHFNEALQLYEQNSVNEMF 180
+LD ELD LR+KL+ K ++ L ELQALER + S + NEAL+LY+++S++E+F
Sbjct: 121 ELDAELDSLRDKLNVVGKRSVELDSELQALERSSVSRERSLRLVNEALELYDESSMDEIF 180
Query: 181 QEMMGTASELRAKIGKLKKRGMEEAKLSKVEKVHTNGDISHHHNGFS----NAKLDDIQE 240
+EM ASELRA + +LK R M+ ++ +KV++ + +H FS + KL+D+++
Sbjct: 181 KEMTKMASELRASVERLKTRRMKASESAKVKR------LKNHGKEFSAMTFDGKLEDLEK 238
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038879945.1 | 2.9e-104 | 86.25 | protein MIS12 homolog [Benincasa hispida] | [more] |
KAA0058004.1 | 7.9e-102 | 83.75 | Centromere protein Mis12 [Cucumis melo var. makuwa] >TYK28378.1 Centromere prote... | [more] |
XP_023515499.1 | 1.3e-101 | 83.47 | protein MIS12 homolog isoform X2 [Cucurbita pepo subsp. pepo] | [more] |
KAA0058032.1 | 5.1e-101 | 82.92 | Centromere protein Mis12 [Cucumis melo var. makuwa] | [more] |
KAG6589575.1 | 8.7e-101 | 83.06 | Protein MIS12-like protein, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
Q2V0Z5 | 2.4e-45 | 44.76 | Protein MIS12 homolog OS=Arabidopsis thaliana OX=3702 GN=MIS12 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7US57 | 3.8e-102 | 83.75 | Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... | [more] |
A0A5A7UQ95 | 2.5e-101 | 82.92 | Centromere protein Mis12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... | [more] |
A0A6J1JME3 | 1.4e-99 | 82.64 | protein MIS12 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=... | [more] |
A0A6J1E0A1 | 1.4e-99 | 82.23 | protein MIS12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111429660 PE=3 SV=1 | [more] |
A0A6J1JD43 | 3.3e-98 | 82.30 | protein MIS12 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485708 PE=... | [more] |
Match Name | E-value | Identity | Description | |
AT5G35520.1 | 1.7e-46 | 44.76 | minichromosome instability 12 (mis12)-like | [more] |