CmUC06G123270 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACAGTTCACAAATTACTTCAGCCCTTTTTCCCTTCTTCCCTAAAGCAGTTCAATTTGAGAAGGAAAGGGAGTTGTGAATTTGAGAAAATGATCGGCGGTTCTCGTAAATGGGCTTATATGCGGATCATCGCCGGCACCATCGTGGGCGGCGTTCTTGGCTTCTACGTAATGCACCGCGTTGAACTTGGCTATAAGGTAACCCCACTTCTCTTCAATTTGAGCTCTCTGATCATCTCTGGGCCAATCCCTTTGATGATTTTTTTTTTAAGGTTATGTGTGGTATGATTGCGGAATTCTTTTCTTTTCTTTTCATTCTTGATTTGATTTGTCTTTTGGGGATGATGTAGGAGAAGATGAAAGAGAGGTTAAAACAATACGAGAACGAACTGAAGAAGAAAGAGCAAATGAAAGAACTTGAAGACTCGCTATAGTGTGAGTATCGTACATTTTTCCTAGTTGGATGTTCTGATTTTACAGAGCCAAAATTGAAGTTCGAGGGTTTTCTGCATCGGCTGTAGAAATTAACAGTATAAGAATACTCTAACTTGTTGCCTAAAACATTCCCTATCAATTAGGGCACTGGAGTACAGAACTGGATTTGGCAATAAAGTAGTGTAGGCTGAAAAGAAGAGAATTGGATTGAACTTTTGTTTCTCATTTCTAAATTTTTCATTTATTAGCAGCCTTTGTGTTTTGTTGTGTGATTAGTTTATGATTGATTCCTTTGGACTTCCAATGTAAATCTAAGCTGATTATTGTCAAGCCCTTTACCTTGCTGTCTTTTGTGCTTATTTGATTTTTGATTTTGTACATTGATGTGAACTCCAATTCTTGAAGAAACACTTTGATTAGAGGAATTTATTTAGTCTGGCTGCACAATATGCTGACATTATTTGGCCTGGCTGTCACGATATGACTGACAATTTTTCACTGTTGGATGTGGAGAGAAAAAAGTGCTTTAAATTTATATCTAGTAGTTATTAAGTAGTGTGCATACTATTGAACTTCGAACGGTTATTATGAGCTAGCCACATTGTGGCAACCTTATTGAATAATTTTTCTAGGACTAGGTGCTTGTATTGTTGGATTCATCACATGCTTTGGCTTATAGAACCTATGGATATGCTTATGAGAAAGAAGTCTACGATTATGGGGCCTTTTTGTTGTATTCTTTGTCAGAAGGTAGAGAAAGACCTAGATCATCTTCTATGGGGTTGTTAGTTTGCGAGTCTCATGTGGAACTGTTTCTTTCTAGAGATTGATCTCGAGTTAGCTCACCAGAGAGATGTTTGCGAGTCTCATTTATGGTTTGCTAGGTGTGTGCTTTATTGTGGTATACATGGGGTAGAGGAACAACATAGTGTTTAAAGGTGTGGAGAGGGATTACAGTAATGTTTGGTCCTTGAGGTTCCATGTTTCTCTTTGGAATTTAGTTTCGATTTCGAAAACTTTTTGTGGTTACTTTATATGTAGTTTAGTTGAAATCCTTTTTTAGAGGGGTTTTTGTGGGTATAGTTTTTTATTTTATTTTATTTTATTTTTATTTTTTAATGTATTTGAATTATTTTTTTTTCTTTTTTTTCTCAATGAAAGCCATAAAATCTAGGTAAATGACTTAACAAGCCATGATCATGTATGTGATGGGCTTCATCTTGCTTCATGGAAGGATAATGCATATCTCTGGATGAAGGAACAGGTTTGAGAGTTGACGATTCATGAGATTCTTTCTAGCTTAGTGTGTTTGGTTTATATGGTTAAATGGGCTCTTCTCTGCTGCTTGAGTGGTTGCCAAGGCAAATTTGCTGTGGTTCCTATGGTCCTTGTTTGTTCTTCATCATCTTAATCAATGTTTAAGATTATTTTCTTCTACTTGTTATTTAATTTTT AACAGTTCACAAATTACTTCAGCCCTTTTTCCCTTCTTCCCTAAAGCAGTTCAATTTGAGAAGGAAAGGGAGTTGTGAATTTGAGAAAATGATCGGCGGTTCTCGTAAATGGGCTTATATGCGGATCATCGCCGGCACCATCGTGGGCGGCGTTCTTGGCTTCTACGTAATGCACCGCGTTGAACTTGGCTATAAGGAGAAGATGAAAGAGAGGTTAAAACAATACGAGAACGAACTGAAGAAGAAAGAGCAAATGAAAGAACTTGAAGACTCGCTATAGTCCATAAAATCTAGGTAAATGACTTAACAAGCCATGATCATGTATGTGATGGGCTTCATCTTGCTTCATGGAAGGATAATGCATATCTCTGGATGAAGGAACAGGTTTGAGAGTTGACGATTCATGAGATTCTTTCTAGCTTAGTGTGTTTGGTTTATATGGTTAAATGGGCTCTTCTCTGCTGCTTGAGTGGTTGCCAAGGCAAATTTGCTGTGGTTCCTATGGTCCTTGTTTGTTCTTCATCATCTTAATCAATGTTTAAGATTATTTTCTTCTACTTGTTATTTAATTTTT ATGATCGGCGGTTCTCGTAAATGGGCTTATATGCGGATCATCGCCGGCACCATCGTGGGCGGCGTTCTTGGCTTCTACGTAATGCACCGCGTTGAACTTGGCTATAAGGAGAAGATGAAAGAGAGGTTAAAACAATACGAGAACGAACTGAAGAAGAAAGAGCAAATGAAAGAACTTGAAGACTCGCTATAG MIGGSRKWAYMRIIAGTIVGGVLGFYVMHRVELGYKEKMKERLKQYENELKKKEQMKELEDSL Homology
BLAST of CmUC06G123270 vs. NCBI nr
Match: XP_038882309.1 (uncharacterized protein LOC120073547 [Benincasa hispida]) HSP 1 Score: 118.2 bits (295), Expect = 2.5e-23 Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 0
BLAST of CmUC06G123270 vs. NCBI nr
Match: XP_004138234.1 (uncharacterized protein LOC101217575 [Cucumis sativus]) HSP 1 Score: 113.2 bits (282), Expect = 8.0e-22 Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of CmUC06G123270 vs. NCBI nr
Match: KGN63809.2 (hypothetical protein Csa_013239 [Cucumis sativus]) HSP 1 Score: 113.2 bits (282), Expect = 8.0e-22 Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of CmUC06G123270 vs. NCBI nr
Match: KAA0058058.1 (ATP-dependent helicase/nuclease subunit A isoform 1 [Cucumis melo var. makuwa] >TYK28404.1 ATP-dependent helicase/nuclease subunit A isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 112.8 bits (281), Expect = 1.0e-21 Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of CmUC06G123270 vs. NCBI nr
Match: XP_008453375.1 (PREDICTED: uncharacterized protein LOC103494113 [Cucumis melo] >XP_008453376.1 PREDICTED: uncharacterized protein LOC103494113 [Cucumis melo]) HSP 1 Score: 112.8 bits (281), Expect = 1.0e-21 Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of CmUC06G123270 vs. ExPASy TrEMBL
Match: A0A1S3BW37 (uncharacterized protein LOC103494113 OS=Cucumis melo OX=3656 GN=LOC103494113 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 5.1e-22 Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of CmUC06G123270 vs. ExPASy TrEMBL
Match: A0A5A7USD3 (ATP-dependent helicase/nuclease subunit A isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00320 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 5.1e-22 Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of CmUC06G123270 vs. ExPASy TrEMBL
Match: A0A6J1E2A1 (uncharacterized protein LOC111430128 OS=Cucurbita moschata OX=3662 GN=LOC111430128 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.6e-20 Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0
BLAST of CmUC06G123270 vs. ExPASy TrEMBL
Match: A0A6J1JJ44 (uncharacterized protein LOC111484905 OS=Cucurbita maxima OX=3661 GN=LOC111484905 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.1e-20 Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = 0
BLAST of CmUC06G123270 vs. ExPASy TrEMBL
Match: A0A6J1BYI4 (uncharacterized protein LOC111006898 OS=Momordica charantia OX=3673 GN=LOC111006898 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 4.7e-20 Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0
BLAST of CmUC06G123270 vs. TAIR 10
Match: AT3G18510.1 (unknown protein; Has 15 Blast hits to 15 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 1.8e-11 Identity = 30/55 (54.55%), Postives = 43/55 (78.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|