CmUC06G122740 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACTTCTATGGTTTATGGTTTGTTTAATTATCCCTAAAGAAGTTAGCCACTCACTCGCTCATTGAATTATCTCAAAGTATAAGAGAAGTGGGAGATTGCAATTGGCATCCAATTCCTTCATTGCCTCTAACTTTGTCAGCCCCATTTTTGCCTTTTTCTTTGTTGTTGTTGTTCTTCTTCCTCCTCCTCCTTTGCTTCCTTTTTTGTTAACCCACAAAACCAAAAATCTCACTCCAATCTTCCCTTTCCTTCAGCCATTACCAAACTTTACTCATTCTTCCTCTTTAACACTGCCCCACTTCTTCAATTTCTTCCCCTAAATCTCATTCTCTTCACCAATGTCTTCAATCCCACGAATCTTTCTTCTCTTCTCTCTCGTTTTCTCTCTTTTTCCCTCGTTTTTCTCCCTTCCCCATCCAGACCCACTAACAATCCGCCCATTTCAAGTGAACCAGTCGCCGCCGGCGACTATTCCGGCATTCCCAGAACAATCGGATGTTCAGGGCTGCCCACTAGACCTCCCAGACGAGCTTTTCCATGGGATTAAGACGGCTTGTGGTCCTTCAAAAGGGGGTGTCTCCGGGCAGCTCCACCGTAGCCGGTGCTGTCCGGTTTTGGCTGCTTGGCTTTACGCTGCTTACTCCGCCACCGCATTGCAGAGGGCCGGTCGAGCCGGGGTTGTCCCGGGTCGCACAGCGCCGTCGTATGACCTACCCCTGCTGCCCGACGACTCAGAAACTTGCGTCAGTAACTTGGATCAAGCTTTGAATCAAAGGGGTATTGAGCTAATGAAGCCTAATGAGACTTGTGATGTGGTTTATTGCTATTGTGGGATCAGATTGCATCCTTTGAGCTGCCCTGAAGCGTTTTCACCGACCCAGGATGGGATTCTTGAAGGAGATAGAAATGTGAAGAGATTGGAGAGAAATTGCTTGAGTAGTGGCAATGTCAACGGATTTCCAGGCCTTGGTGGCTGTTCTAAATGCTTGAAAAGTCTTTATCAGGTGAACTTTTTTCTCATCTCTTACTCTTTCCCTTCTTAACACCATTGCATTACATTGTTTTTCTGTTTCCTTATTGTTTTCAGTGTCATTAAAAGATTGGGAATGTTCTACTTTCCTTTCTGTATCTTAGAGTTATCAGAACACTACAGGAAAATATCTAATCTGCTTAACTGCTAGCAATGATCTTGGTGAGAATTTACTTTTGGGGTTGTTTCAAATTGAAGGAATCATTTTAAAGGGAAAGCAAAATTATATTTGGAAATGGCCACTTGGTAGTGACTCTTTTGAAGAACCATGACAAGCTCACAAGTCTGTATGAATGACATATTGCATTCTGTGTTTGGCTGATGAAAACTGCAGATCATAGCATTTAACAATACGTGAATTCCTTTTATGTTGATCAATCGTGTATCATGTTTGTAGTTCAAATTTATTGCTGTCAGTGGTAGAAGAAAATAACATAAGCCTTCAGATTTCTGCTATAGAATCTTGTTGGGAATGCTTTCACTATCTTGTGCAGAGATTTTTTTTTCTTTGTTGGAGAAACTTGGAAAGTTCAGTGTCAAATCAAACCTTATAGGTTTTATACTTTACATTGTTTAGAATTTCGATCATTGTTGTTTGATTAGATGTGGCTCCAACTACATGGAATACTATAAACTAATGTACCAAACATATATGATTATGTATTTGGCTATTGAGACATTAACATAATGCAGCTCAACAACAAGGAAACTTTGAATTCAAGCAAGCCAGAGAATAGGACCACCAAGATGCACCACAAGGAGTGTCAGCTGATGGGTCTAACATGGCTTCTTGCCAAGAACCGAACGGCGTATATTCGCACTGTTACGTCAGTGCTTCGGGCTAAAATGATGAGTGAAGATGGGTCAGATCCTCGGTCGTGTACTCTCAACAGCGACGGAATGCCTCTGGCTGTTGATTCGGCTGAGATCTCTGGTTGTTCTGTTTCAATACCTATTCAGACACCATTGTATCTTGGCCTGGTTTGGGTTGCTTTGATGTACAATCTGATCATGTTGGTTTCTACACTATGAGGTTAGAAGTGATTCTGCTTAGAAATTTGTAACTGTGACCCTTTTTTTCCTCCTTTTTTTGTGTAGGTTTTTTGTGCATTGTGATTGTTGTTTTGTATTCATGAGGCTTCAGAAATGATATCTTTTCTCTGTGTTGATGTGAAAAATGCAAAATTGTTTTCTGATGGGTCCTCTGGGTAAGCAACATTTCTGTTTAGGTCCTTGAAATTGGATTTTTTTTGGTGAAAATGTCCAAAATTTGCATGTGCAAAGAGGGCCTATTGATTTGTCATTGATAGCCAATTGTTGTATTATTTTCTGGCCCTTTGTTTGGTGGCATTTTATAGATAAGATAAGATAGCAAAATGCATATTTTCAC TACTTCTATGGTTTATGGTTTGTTTAATTATCCCTAAAGAAGTTAGCCACTCACTCGCTCATTGAATTATCTCAAAGTATAAGAGAAGTGGGAGATTGCAATTGGCATCCAATTCCTTCATTGCCTCTAACTTTGTCAGCCCCATTTTTGCCTTTTTCTTTGTTGTTGTTGTTCTTCTTCCTCCTCCTCCTTTGCTTCCTTTTTTGTTAACCCACAAAACCAAAAATCTCACTCCAATCTTCCCTTTCCTTCAGCCATTACCAAACTTTACTCATTCTTCCTCTTTAACACTGCCCCACTTCTTCAATTTCTTCCCCTAAATCTCATTCTCTTCACCAATGTCTTCAATCCCACGAATCTTTCTTCTCTTCTCTCTCGTTTTCTCTCTTTTTCCCTCGTTTTTCTCCCTTCCCCATCCAGACCCACTAACAATCCGCCCATTTCAAGTGAACCAGTCGCCGCCGGCGACTATTCCGGCATTCCCAGAACAATCGGATGTTCAGGGCTGCCCACTAGACCTCCCAGACGAGCTTTTCCATGGGATTAAGACGGCTTGTGGTCCTTCAAAAGGGGGTGTCTCCGGGCAGCTCCACCGTAGCCGGTGCTGTCCGGTTTTGGCTGCTTGGCTTTACGCTGCTTACTCCGCCACCGCATTGCAGAGGGCCGGTCGAGCCGGGGTTGTCCCGGGTCGCACAGCGCCGTCGTATGACCTACCCCTGCTGCCCGACGACTCAGAAACTTGCGTCAGTAACTTGGATCAAGCTTTGAATCAAAGGGGTATTGAGCTAATGAAGCCTAATGAGACTTGTGATGTGGTTTATTGCTATTGTGGGATCAGATTGCATCCTTTGAGCTGCCCTGAAGCGTTTTCACCGACCCAGGATGGGATTCTTGAAGGAGATAGAAATGTGAAGAGATTGGAGAGAAATTGCTTGAGTAGTGGCAATGTCAACGGATTTCCAGGCCTTGGTGGCTGTTCTAAATGCTTGAAAAGTCTTTATCAGCTCAACAACAAGGAAACTTTGAATTCAAGCAAGCCAGAGAATAGGACCACCAAGATGCACCACAAGGAGTGTCAGCTGATGGGTCTAACATGGCTTCTTGCCAAGAACCGAACGGCGTATATTCGCACTGTTACGTCAGTGCTTCGGGCTAAAATGATGAGTGAAGATGGGTCAGATCCTCGGTCGTGTACTCTCAACAGCGACGGAATGCCTCTGGCTGTTGATTCGGCTGAGATCTCTGGTTGTTCTGTTTCAATACCTATTCAGACACCATTGTATCTTGGCCTGGTTTGGGTTGCTTTGATGTACAATCTGATCATGTTGGTTTCTACACTATGAGGTTAGAAGTGATTCTGCTTAGAAATTTGTAACTGTGACCCTTTTTTTCCTCCTTTTTTTGTGTAGGTTTTTTGTGCATTGTGATTGTTGTTTTGTATTCATGAGGCTTCAGAAATGATATCTTTTCTCTGTGTTGATGTGAAAAATGCAAAATTGTTTTCTGATGGGTCCTCTGGGTAAGCAACATTTCTGTTTAGGTCCTTGAAATTGGATTTTTTTTGGTGAAAATGTCCAAAATTTGCATGTGCAAAGAGGGCCTATTGATTTGTCATTGATAGCCAATTGTTGTATTATTTTCTGGCCCTTTGTTTGGTGGCATTTTATAGATAAGATAAGATAGCAAAATGCATATTTTCAC ATGTCTTCAATCCCACGAATCTTTCTTCTCTTCTCTCTCGTTTTCTCTCTTTTTCCCTCGTTTTTCTCCCTTCCCCATCCAGACCCACTAACAATCCGCCCATTTCAAGTGAACCAGTCGCCGCCGGCGACTATTCCGGCATTCCCAGAACAATCGGATGTTCAGGGCTGCCCACTAGACCTCCCAGACGAGCTTTTCCATGGGATTAAGACGGCTTGTGGTCCTTCAAAAGGGGGTGTCTCCGGGCAGCTCCACCGTAGCCGGTGCTGTCCGGTTTTGGCTGCTTGGCTTTACGCTGCTTACTCCGCCACCGCATTGCAGAGGGCCGGTCGAGCCGGGGTTGTCCCGGGTCGCACAGCGCCGTCGTATGACCTACCCCTGCTGCCCGACGACTCAGAAACTTGCGTCAGTAACTTGGATCAAGCTTTGAATCAAAGGGGTATTGAGCTAATGAAGCCTAATGAGACTTGTGATGTGGTTTATTGCTATTGTGGGATCAGATTGCATCCTTTGAGCTGCCCTGAAGCGTTTTCACCGACCCAGGATGGGATTCTTGAAGGAGATAGAAATGTGAAGAGATTGGAGAGAAATTGCTTGAGTAGTGGCAATGTCAACGGATTTCCAGGCCTTGGTGGCTGTTCTAAATGCTTGAAAAGTCTTTATCAGCTCAACAACAAGGAAACTTTGAATTCAAGCAAGCCAGAGAATAGGACCACCAAGATGCACCACAAGGAGTGTCAGCTGATGGGTCTAACATGGCTTCTTGCCAAGAACCGAACGGCGTATATTCGCACTGTTACGTCAGTGCTTCGGGCTAAAATGATGAGTGAAGATGGGTCAGATCCTCGGTCGTGTACTCTCAACAGCGACGGAATGCCTCTGGCTGTTGATTCGGCTGAGATCTCTGGTTGTTCTGTTTCAATACCTATTCAGACACCATTGTATCTTGGCCTGGTTTGGGTTGCTTTGATGTACAATCTGATCATGTTGGTTTCTACACTATGA MSSIPRIFLLFSLVFSLFPSFFSLPHPDPLTIRPFQVNQSPPATIPAFPEQSDVQGCPLDLPDELFHGIKTACGPSKGGVSGQLHRSRCCPVLAAWLYAAYSATALQRAGRAGVVPGRTAPSYDLPLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSPTQDGILEGDRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTTKMHHKECQLMGLTWLLAKNRTAYIRTVTSVLRAKMMSEDGSDPRSCTLNSDGMPLAVDSAEISGCSVSIPIQTPLYLGLVWVALMYNLIMLVSTL Homology
BLAST of CmUC06G122740 vs. NCBI nr
Match: XP_038880109.1 (uncharacterized GPI-anchored protein At4g28100 [Benincasa hispida]) HSP 1 Score: 665.2 bits (1715), Expect = 2.9e-187 Identity = 327/334 (97.90%), Postives = 330/334 (98.80%), Query Frame = 0
BLAST of CmUC06G122740 vs. NCBI nr
Match: TYK28481.1 (putative GPI-anchored protein [Cucumis melo var. makuwa]) HSP 1 Score: 647.5 bits (1669), Expect = 6.3e-182 Identity = 317/334 (94.91%), Postives = 324/334 (97.01%), Query Frame = 0
BLAST of CmUC06G122740 vs. NCBI nr
Match: XP_011649105.2 (uncharacterized GPI-anchored protein At4g28100 [Cucumis sativus] >KAE8652472.1 hypothetical protein Csa_013459 [Cucumis sativus]) HSP 1 Score: 647.1 bits (1668), Expect = 8.2e-182 Identity = 318/334 (95.21%), Postives = 324/334 (97.01%), Query Frame = 0
BLAST of CmUC06G122740 vs. NCBI nr
Match: XP_008453468.1 (PREDICTED: uncharacterized GPI-anchored protein At4g28100 [Cucumis melo] >KAA0058127.1 putative GPI-anchored protein [Cucumis melo var. makuwa]) HSP 1 Score: 641.7 bits (1654), Expect = 3.4e-180 Identity = 315/334 (94.31%), Postives = 321/334 (96.11%), Query Frame = 0
BLAST of CmUC06G122740 vs. NCBI nr
Match: XP_023005177.1 (uncharacterized GPI-anchored protein At4g28100-like [Cucurbita maxima]) HSP 1 Score: 632.5 bits (1630), Expect = 2.1e-177 Identity = 308/333 (92.49%), Postives = 316/333 (94.89%), Query Frame = 0
BLAST of CmUC06G122740 vs. ExPASy Swiss-Prot
Match: Q9SUC9 (Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana OX=3702 GN=At4g28100 PE=2 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 4.8e-52 Identity = 130/303 (42.90%), Postives = 172/303 (56.77%), Query Frame = 0
BLAST of CmUC06G122740 vs. ExPASy TrEMBL
Match: A0A5D3DY25 (Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001150 PE=4 SV=1) HSP 1 Score: 647.5 bits (1669), Expect = 3.0e-182 Identity = 317/334 (94.91%), Postives = 324/334 (97.01%), Query Frame = 0
BLAST of CmUC06G122740 vs. ExPASy TrEMBL
Match: A0A5A7UTR5 (Putative GPI-anchored protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004370 PE=4 SV=1) HSP 1 Score: 641.7 bits (1654), Expect = 1.7e-180 Identity = 315/334 (94.31%), Postives = 321/334 (96.11%), Query Frame = 0
BLAST of CmUC06G122740 vs. ExPASy TrEMBL
Match: A0A1S3BWB4 (uncharacterized GPI-anchored protein At4g28100 OS=Cucumis melo OX=3656 GN=LOC103494171 PE=4 SV=1) HSP 1 Score: 641.7 bits (1654), Expect = 1.7e-180 Identity = 315/334 (94.31%), Postives = 321/334 (96.11%), Query Frame = 0
BLAST of CmUC06G122740 vs. ExPASy TrEMBL
Match: A0A6J1KSF1 (uncharacterized GPI-anchored protein At4g28100-like OS=Cucurbita maxima OX=3661 GN=LOC111498281 PE=4 SV=1) HSP 1 Score: 632.5 bits (1630), Expect = 1.0e-177 Identity = 308/333 (92.49%), Postives = 316/333 (94.89%), Query Frame = 0
BLAST of CmUC06G122740 vs. ExPASy TrEMBL
Match: A0A6J1F5L3 (uncharacterized GPI-anchored protein At4g28100-like OS=Cucurbita moschata OX=3662 GN=LOC111441048 PE=4 SV=1) HSP 1 Score: 626.3 bits (1614), Expect = 7.2e-176 Identity = 305/333 (91.59%), Postives = 315/333 (94.59%), Query Frame = 0
BLAST of CmUC06G122740 vs. TAIR 10
Match: AT3G18050.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28100.1); Has 67 Blast hits to 66 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 354.0 bits (907), Expect = 1.3e-97 Identity = 192/332 (57.83%), Postives = 228/332 (68.67%), Query Frame = 0
BLAST of CmUC06G122740 vs. TAIR 10
Match: AT4G28100.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18050.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 206.5 bits (524), Expect = 3.4e-53 Identity = 130/303 (42.90%), Postives = 172/303 (56.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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