CmUC05G107580 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTCAAGACTCTTAAAATATCCCTTTCTCTGTAAAGTTCATAGAGAGACCCCCTTATCCCCTACTCTCTCTTTCTCTCTATATCTTCTTTCTCTCTCTACCAGAAAAGCACTGCCAATCAGCCAACCGCCGCCGGTTGATGACAACGAACCCTAATCCTTGGGCGTCGCCGGCGAGTACAAGCAGAGCGGAGGAAGGTCGGAAGCCCGCCCCATCTCCCTAGTGGGACGGAATCGATCTCCCGCCGGTAACTTATGGAGGTTTTGTTCGGTCCTCCGACTTTCAGCATCGAGGTTCCGCCGCCCACGGCGTTCGCCGGCGTATCTCTTCCGTCGGAGAATCCCGCCGGGGCCGAGGCTCAGAATCGAGCTCGGTCGGGTTTTCTCAGGTCTGGATCTGGTAGCTCGATTGGGGAAAATTCGTCGGAGAGTTCGTCGTCGATTGGGGTTCCCGACGACGATTCCGATGACGACGGAGGCGGTGATGAGGTGCAAAGCAAGGCAAAGGAAGGAGGATTATGCGGATTGGATTCTCTCGAAGATGCTCTTCCGATTAAGTGAGTTTCTCTGTCCCTATTTCTTAAATTTCCCCTCTCTTATAAACTAGAAACCGGAAATTGAAGACGAATTAGCGATTGAACTTGAAAGTTTTCCAATTAATCAGCAATTTCCTGTGAATTACCGATTTCCATCTCTTTAATGCGATGAAATCTTTCCCATGGGAAAAAACGAAATTGCAGAAGGGGATTATCTAGCCATTTCTCGGGGAAATCGAAGTCGTTCGCGAATCTATCAGAGGTTATTCAAGTGAAAGATTTAGAGAAGCCGGAGAATCCTTTCAATAAGAGAAGAAGGATTTTAATGGCGTCGAAATGGTCGAGAAAAGCTTCTTTCTACTACTGGCCAAACCCTAAATCGATGCCTCTGTTGGCCCTGAACGAAAACGAAGAAGAAGGTCATAAAGAAGCGGCTGCCGGTTCCGATTCAGCTGACGGAGATGGAGAAAGCGATGGAGAAGATGAAGCGAACCAACGAAGAAGACGAACCCTAGGGCAAAGGTTTCATGATCGGAAGCTCGTTAATGGTTTCAAATCCAAGAGCTGTTTTGATCTTCAAGAATATGAAGAACAATGACTCATAATGAAATGAAATGAAATCCTTTAGCCCTTTGTTCTCGGCTTTTTAAGAATTTATTGATCTGAACAAAAGGAAGGGAAAAAGAAATTTTTTTTTTCTTTTCTAATTTTAATTTTTATGTTTCATCAGTCCATGTAGATAAATTAA CCTCAAGACTCTTAAAATATCCCTTTCTCTGTAAAGTTCATAGAGAGACCCCCTTATCCCCTACTCTCTCTTTCTCTCTATATCTTCTTTCTCTCTCTACCAGAAAAGCACTGCCAATCAGCCAACCGCCGCCGGTTGATGACAACGAACCCTAATCCTTGGGCGTCGCCGGCGAGTACAAGCAGAGCGGAGGAAGGTCGGAAGCCCGCCCCATCTCCCTAGTGGGACGGAATCGATCTCCCGCCGGTAACTTATGGAGGTTTTGTTCGGTCCTCCGACTTTCAGCATCGAGGTTCCGCCGCCCACGGCGTTCGCCGGCGTATCTCTTCCGTCGGAGAATCCCGCCGGGGCCGAGGCTCAGAATCGAGCTCGGTCGGGTTTTCTCAGGTCTGGATCTGGTAGCTCGATTGGGGAAAATTCGTCGGAGAGTTCGTCGTCGATTGGGGTTCCCGACGACGATTCCGATGACGACGGAGGCGGTGATGAGGTGCAAAGCAAGGCAAAGGAAGGAGGATTATGCGGATTGGATTCTCTCGAAGATGCTCTTCCGATTAAAAGGGGATTATCTAGCCATTTCTCGGGGAAATCGAAGTCGTTCGCGAATCTATCAGAGGTTATTCAAGTGAAAGATTTAGAGAAGCCGGAGAATCCTTTCAATAAGAGAAGAAGGATTTTAATGGCGTCGAAATGGTCGAGAAAAGCTTCTTTCTACTACTGGCCAAACCCTAAATCGATGCCTCTGTTGGCCCTGAACGAAAACGAAGAAGAAGGTCATAAAGAAGCGGCTGCCGGTTCCGATTCAGCTGACGGAGATGGAGAAAGCGATGGAGAAGATGAAGCGAACCAACGAAGAAGACGAACCCTAGGGCAAAGGTTTCATGATCGGAAGCTCGTTAATGGTTTCAAATCCAAGAGCTGTTTTGATCTTCAAGAATATGAAGAACAATGACTCATAATGAAATGAAATGAAATCCTTTAGCCCTTTGTTCTCGGCTTTTTAAGAATTTATTGATCTGAACAAAAGGAAGGGAAAAAGAAATTTTTTTTTTCTTTTCTAATTTTAATTTTTATGTTTCATCAGTCCATGTAGATAAATTAA ATGGAGGTTTTGTTCGGTCCTCCGACTTTCAGCATCGAGGTTCCGCCGCCCACGGCGTTCGCCGGCGTATCTCTTCCGTCGGAGAATCCCGCCGGGGCCGAGGCTCAGAATCGAGCTCGGTCGGGTTTTCTCAGGTCTGGATCTGGTAGCTCGATTGGGGAAAATTCGTCGGAGAGTTCGTCGTCGATTGGGGTTCCCGACGACGATTCCGATGACGACGGAGGCGGTGATGAGGTGCAAAGCAAGGCAAAGGAAGGAGGATTATGCGGATTGGATTCTCTCGAAGATGCTCTTCCGATTAAAAGGGGATTATCTAGCCATTTCTCGGGGAAATCGAAGTCGTTCGCGAATCTATCAGAGGTTATTCAAGTGAAAGATTTAGAGAAGCCGGAGAATCCTTTCAATAAGAGAAGAAGGATTTTAATGGCGTCGAAATGGTCGAGAAAAGCTTCTTTCTACTACTGGCCAAACCCTAAATCGATGCCTCTGTTGGCCCTGAACGAAAACGAAGAAGAAGGTCATAAAGAAGCGGCTGCCGGTTCCGATTCAGCTGACGGAGATGGAGAAAGCGATGGAGAAGATGAAGCGAACCAACGAAGAAGACGAACCCTAGGGCAAAGGTTTCATGATCGGAAGCTCGTTAATGGTTTCAAATCCAAGAGCTGTTTTGATCTTCAAGAATATGAAGAACAATGA MEVLFGPPTFSIEVPPPTAFAGVSLPSENPAGAEAQNRARSGFLRSGSGSSIGENSSESSSSIGVPDDDSDDDGGGDEVQSKAKEGGLCGLDSLEDALPIKRGLSSHFSGKSKSFANLSEVIQVKDLEKPENPFNKRRRILMASKWSRKASFYYWPNPKSMPLLALNENEEEGHKEAAAGSDSADGDGESDGEDEANQRRRRTLGQRFHDRKLVNGFKSKSCFDLQEYEEQ Homology
BLAST of CmUC05G107580 vs. NCBI nr
Match: XP_038898503.1 (uncharacterized protein LOC120086121 [Benincasa hispida]) HSP 1 Score: 372.1 bits (954), Expect = 3.5e-99 Identity = 200/231 (86.58%), Postives = 209/231 (90.48%), Query Frame = 0
BLAST of CmUC05G107580 vs. NCBI nr
Match: XP_008466301.1 (PREDICTED: uncharacterized protein LOC103503753 [Cucumis melo]) HSP 1 Score: 354.4 bits (908), Expect = 7.6e-94 Identity = 195/232 (84.05%), Postives = 203/232 (87.50%), Query Frame = 0
BLAST of CmUC05G107580 vs. NCBI nr
Match: XP_022937406.1 (uncharacterized protein LOC111443706 [Cucurbita moschata] >XP_023535797.1 uncharacterized protein LOC111797124 [Cucurbita pepo subsp. pepo] >KAG6591629.1 hypothetical protein SDJN03_13975, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 338.6 bits (867), Expect = 4.3e-89 Identity = 190/231 (82.25%), Postives = 198/231 (85.71%), Query Frame = 0
BLAST of CmUC05G107580 vs. NCBI nr
Match: XP_022975769.1 (uncharacterized protein LOC111476326 [Cucurbita maxima]) HSP 1 Score: 337.0 bits (863), Expect = 1.3e-88 Identity = 189/234 (80.77%), Postives = 199/234 (85.04%), Query Frame = 0
BLAST of CmUC05G107580 vs. NCBI nr
Match: XP_004136309.2 (uncharacterized protein LOC101218277 [Cucumis sativus] >KGN60173.1 hypothetical protein Csa_002443 [Cucumis sativus]) HSP 1 Score: 335.1 bits (858), Expect = 4.8e-88 Identity = 189/235 (80.43%), Postives = 199/235 (84.68%), Query Frame = 0
BLAST of CmUC05G107580 vs. ExPASy TrEMBL
Match: A0A1S3CQX1 (uncharacterized protein LOC103503753 OS=Cucumis melo OX=3656 GN=LOC103503753 PE=4 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 3.7e-94 Identity = 195/232 (84.05%), Postives = 203/232 (87.50%), Query Frame = 0
BLAST of CmUC05G107580 vs. ExPASy TrEMBL
Match: A0A6J1FA94 (uncharacterized protein LOC111443706 OS=Cucurbita moschata OX=3662 GN=LOC111443706 PE=4 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 2.1e-89 Identity = 190/231 (82.25%), Postives = 198/231 (85.71%), Query Frame = 0
BLAST of CmUC05G107580 vs. ExPASy TrEMBL
Match: A0A6J1ILJ2 (uncharacterized protein LOC111476326 OS=Cucurbita maxima OX=3661 GN=LOC111476326 PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 6.1e-89 Identity = 189/234 (80.77%), Postives = 199/234 (85.04%), Query Frame = 0
BLAST of CmUC05G107580 vs. ExPASy TrEMBL
Match: A0A0A0LEH9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881860 PE=4 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 2.3e-88 Identity = 189/235 (80.43%), Postives = 199/235 (84.68%), Query Frame = 0
BLAST of CmUC05G107580 vs. ExPASy TrEMBL
Match: A0A6J1C5V2 (transcription initiation factor TFIID subunit 7-like OS=Momordica charantia OX=3673 GN=LOC111008707 PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 1.1e-85 Identity = 181/238 (76.05%), Postives = 198/238 (83.19%), Query Frame = 0
BLAST of CmUC05G107580 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 117.5 bits (293), Expect = 1.5e-26 Identity = 93/241 (38.59%), Postives = 129/241 (53.53%), Query Frame = 0
BLAST of CmUC05G107580 vs. TAIR 10
Match: AT2G24550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 108.6 bits (270), Expect = 6.7e-24 Identity = 84/198 (42.42%), Postives = 116/198 (58.59%), Query Frame = 0
BLAST of CmUC05G107580 vs. TAIR 10
Match: AT4G31510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 205 Blast hits to 205 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 3; Plants - 187; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 97.8 bits (242), Expect = 1.2e-20 Identity = 82/224 (36.61%), Postives = 117/224 (52.23%), Query Frame = 0
BLAST of CmUC05G107580 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 71.6 bits (174), Expect = 9.1e-13 Identity = 53/131 (40.46%), Postives = 80/131 (61.07%), Query Frame = 0
BLAST of CmUC05G107580 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 65.9 bits (159), Expect = 5.0e-11 Identity = 56/165 (33.94%), Postives = 84/165 (50.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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