CmUC05G097450 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC05G097450
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	60S ribosomal protein L39
Location	CmU531Chr05: 27008888 .. 27010407 (+)
RNA-Seq Expression	CmUC05G097450
Synteny	CmUC05G097450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGATAAAATAGCATTTGATAGGAGATCGTATTTTAATAAAATAATATTTATTTTTTTGAGTTTAGAGGTTCAATCATACACTCTTAAGTGAAAGCGAAAGTTAGCTTAACTATAATTGACACAAACTTTTTGTAGTAAAAAAACCCATCCTTACAAATTTTACCAATTTTTTGTATTAATAGTATTATTTGCTCACATTCTTTTGTATTTTCTATGAATCCCTCTATTTTTTTTATATAATAATTACAAAAATGAGTACTTGACCAAGTCCACGATTTGCTTTGTAGCGTAAAAAGAAAAGAGAGAAAAAAATATGATTAAAATGTATTAACTGACCAGCATCAATTTATATCTTTAATTAAAATTATGAAATAAAAATGGTATAACTTAAACTCTCTTACAAACAATTTAAAAAGAAAAGAAAAAAAAAAACTCTCTTAAAAATTTTGTTGAACCAATATCGCGTGAAACTTATAATTTGAATAAATTAAACTCCTAAATTTTTATTTGTCAATCAACGTAAACCCTCTATTACTATTACTTTTGAAAATCATCGCTATATTAATTTTCAAATGCGTGTTGCCTTTTCCAACTGTCAATTTTAAAAAATGGACGATTAAAATAAATGTATTGAAGATTTTCAAATTAAAGTCTAAGAATTTAATTGAAATAATTATAAGTTACACACGAATTCAATGTTTAAATTGATACAATTATTCGTTTATAATTTAAATTAATACAACCCTTAAAATTTAAGGGTATAAATTGAAGATTTTTAGTCACAAAATATATCACAAACGGATAATTAAACCGTTGTTGTACATAATTCGGTAGAAAAATAAAAATTAAAAAAAGAAAAAAAGAAAAAAAGAAAAGGAAATTAATGGGCCAGGCTCTACCTTTTGGCCCACGAGCTTCAATATTGGTCGAATTTCTCATTAGCTTTCATTAGTCTAGTAAAGTTGGGCCCAATCAGAAGCCCATTTACTGATAGTAAACATTTGGTTGGGCTGCCCGCGGGCAAATCTCGATTACCCTTCTCAGTGGAGCGTATAAATGTTTTTCGCTACTGATAGGGTTTTTCTTTGTCCCGCCGTCTGCTTCCAAGCTCGCCGTCTATCGCCGGAACTCGAAAATGGTACGTATTGTTATTCGACTCTCTGAACTTTTTTCCCCGTAAACTTGGTGCTATTCATCGTTCTTTAGTGGATGTTTGAACTTCTGCGAGTCTGTAATTCGATTTTCTCTTCCTTTCCAATCCACAGCCGTCTCACAAGACTTTCAGAATCAAGAAGAAGCTCGCGAAGAAGATGAGGCAGAATAGGCCGATCCCGCACTGGATCCGCCTGAGAACCGACAACACGATCAGGTATTAAGCCTACGTTTTTTGAATCTACGTATTTTCCTCTGTATCTGTCTATCTCTTTCTCTCGCATTCTGACGTTTTATATTCGATCGTATTACAGATACAACGCGAAGCGCAGGCACTGGCGTCGCACCAAGCTAGGGTTCTGA

mRNA sequence

ATGTGTGATAAAATAGCATTTGATAGGAGATCTGGAGCGTATAAATGTTTTTCGCTACTGATAGGGTTTTTCTTTGTCCCGCCGTCTGCTTCCAAGCTCGCCGTCTATCGCCGGAACTCGAAAATGCCGTCTCACAAGACTTTCAGAATCAAGAAGAAGCTCGCGAAGAAGATGAGGCAGAATAGGCCGATCCCGCACTGGATCCGCCTGAGAACCGACAACACGATCAGATACAACGCGAAGCGCAGGCACTGGCGTCGCACCAAGCTAGGGTTCTGA

Coding sequence (CDS)

ATGTGTGATAAAATAGCATTTGATAGGAGATCTGGAGCGTATAAATGTTTTTCGCTACTGATAGGGTTTTTCTTTGTCCCGCCGTCTGCTTCCAAGCTCGCCGTCTATCGCCGGAACTCGAAAATGCCGTCTCACAAGACTTTCAGAATCAAGAAGAAGCTCGCGAAGAAGATGAGGCAGAATAGGCCGATCCCGCACTGGATCCGCCTGAGAACCGACAACACGATCAGATACAACGCGAAGCGCAGGCACTGGCGTCGCACCAAGCTAGGGTTCTGA

Protein sequence

MCDKIAFDRRSGAYKCFSLLIGFFFVPPSASKLAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF

Homology

[Close]

BLAST of CmUC05G097450 vs. NCBI nr
Match: KAG7024434.1 (60S ribosomal protein L39, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 148.7 bits (374), Expect = 2.5e-32
Identity = 74/82 (90.24%), Postives = 75/82 (91.46%), Query Frame = 0


Query: 11 SGAYKCFSLLIGFFFVPPSASKLAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRL 70
          S AYK  SLLIGFF +PPSASKLA   RNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRL
Sbjct: 6  SRAYKASSLLIGFFIIPPSASKLAADCRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRL 65

Query: 71 RTDNTIRYNAKRRHWRRTKLGF 93
          RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 66 RTDNTIRYNAKRRHWRRTKLGF 87

[Close]

BLAST of CmUC05G097450 vs. NCBI nr
Match: KAG6585491.1 (60S ribosomal protein L39, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020407.1 60S ribosomal protein L39, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 115.9 bits (289), Expect = 1.8e-22
Identity = 59/75 (78.67%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 18 SLLIGFFFVPPSASKLAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIR 77
          SL +GF  V           R SKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIR
Sbjct: 9  SLKLGFLLVVRCPKTSQPVSRISKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIR 68

Query: 78 YNAKRRHWRRTKLGF 93
          YNAKRRHWRRTKLGF
Sbjct: 69 YNAKRRHWRRTKLGF 83

[Close]

BLAST of CmUC05G097450 vs. NCBI nr
Match: KAF9662083.1 (hypothetical protein SADUNF_Sadunf18G0016500 [Salix dunnii])

HSP 1 Score: 114.8 bits (286), Expect = 4.0e-22
Identity = 57/78 (73.08%), Postives = 64/78 (82.05%), Query Frame = 0


Query: 15 KCFSLLIGFFFVPPSASKLAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDN 74
          KC      +F +   A+  A Y++ +KMPSHKTFRIKKKLAKKMRQNRPIPHWIR+RTDN
Sbjct: 11 KCQGFSFQYFRLQDQAAAEA-YQKQAKMPSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDN 70

Query: 75 TIRYNAKRRHWRRTKLGF 93
          TIRYNAKRRHWRRTKLGF
Sbjct: 71 TIRYNAKRRHWRRTKLGF 87

[Close]

BLAST of CmUC05G097450 vs. NCBI nr
Match: XP_022962571.1 (uncharacterized protein LOC111462968 [Cucurbita moschata])

HSP 1 Score: 113.6 bits (283), Expect = 9.0e-22
Identity = 56/60 (93.33%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 33  LAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 92
           LA   R SKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 71  LAAGSRFSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 130

[Close]

BLAST of CmUC05G097450 vs. NCBI nr
Match: PON37200.1 (Ribosomal protein [Trema orientale] >PON38027.1 Ribosomal protein [Parasponia andersonii])

HSP 1 Score: 113.6 bits (283), Expect = 9.0e-22
Identity = 57/67 (85.07%), Postives = 60/67 (89.55%), Query Frame = 0


Query: 26 VPPSASKLAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW 85
          VPPS ++     R +KMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW
Sbjct: 7  VPPSQAR--DLDRPAKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW 66

Query: 86 RRTKLGF 93
          RRTKLGF
Sbjct: 67 RRTKLGF 71

[Close]

BLAST of CmUC05G097450 vs. ExPASy Swiss-Prot
Match: Q6KAJ8 (60S ribosomal protein L39-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39A PE=3 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 4.2e-22
Identity = 49/51 (96.08%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 42 MPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          MPSHKTFRIKKKLAKKMRQNRPIP+WIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1  MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51

[Close]

BLAST of CmUC05G097450 vs. ExPASy Swiss-Prot
Match: P51426 (60S ribosomal protein L39-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39B PE=3 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 4.2e-22
Identity = 49/51 (96.08%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 42 MPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          MPSHKTFRIKKKLAKKMRQNRPIP+WIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1  MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51

[Close]

BLAST of CmUC05G097450 vs. ExPASy Swiss-Prot
Match: P51425 (60S ribosomal protein L39 OS=Zea mays OX=4577 GN=RPL39 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.2e-22
Identity = 49/51 (96.08%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 42 MPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          MPSHKTFRIKKKLAKKMRQNRPIP+WIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1  MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51

[Close]

BLAST of CmUC05G097450 vs. ExPASy Swiss-Prot
Match: Q5SMI4 (60S ribosomal protein L39-3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39C PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-21
Identity = 48/51 (94.12%), Postives = 51/51 (100.00%), Query Frame = 0


Query: 42 MPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          MPSHKTF+IKKKLAKKMRQNRPIP+WIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1  MPSHKTFQIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51

[Close]

BLAST of CmUC05G097450 vs. ExPASy Swiss-Prot
Match: P51424 (60S ribosomal protein L39-1 OS=Arabidopsis thaliana OX=3702 GN=RPL39A PE=3 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-21
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 42 MPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          MPSHK+F IKKKL KKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1  MPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51

[Close]

BLAST of CmUC05G097450 vs. ExPASy TrEMBL
Match: A0A2P5ANB0 (Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_315710 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.3e-22
Identity = 57/67 (85.07%), Postives = 60/67 (89.55%), Query Frame = 0


Query: 26 VPPSASKLAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW 85
          VPPS ++     R +KMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW
Sbjct: 7  VPPSQAR--DLDRPAKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW 66

Query: 86 RRTKLGF 93
          RRTKLGF
Sbjct: 67 RRTKLGF 71

[Close]

BLAST of CmUC05G097450 vs. ExPASy TrEMBL
Match: A0A2P5AKY6 (Ribosomal protein OS=Trema orientale OX=63057 GN=TorRG33x02_347900 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.3e-22
Identity = 57/67 (85.07%), Postives = 60/67 (89.55%), Query Frame = 0


Query: 26 VPPSASKLAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW 85
          VPPS ++     R +KMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW
Sbjct: 7  VPPSQAR--DLDRPAKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW 66

Query: 86 RRTKLGF 93
          RRTKLGF
Sbjct: 67 RRTKLGF 71

[Close]

BLAST of CmUC05G097450 vs. ExPASy TrEMBL
Match: A0A6J1HDM7 (uncharacterized protein LOC111462968 OS=Cucurbita moschata OX=3662 GN=LOC111462968 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.3e-22
Identity = 56/60 (93.33%), Postives = 56/60 (93.33%), Query Frame = 0


Query: 33  LAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 92
           LA   R SKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 71  LAAGSRFSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 130

[Close]

BLAST of CmUC05G097450 vs. ExPASy TrEMBL
Match: A0A0A0LM35 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382530 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.7e-22
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 0


Query: 38 RNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          R SKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 24 RISKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 78

[Close]

BLAST of CmUC05G097450 vs. ExPASy TrEMBL
Match: A0A3P6CHA1 (Uncharacterized protein (Fragment) OS=Brassica oleracea OX=3712 GN=BOLC4T27057H PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.6e-21
Identity = 56/68 (82.35%), Postives = 58/68 (85.29%), Query Frame = 0


Query: 25 FVPPSASKLAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRH 84
          F+  SA      RR SKMPSHK+F IKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRH
Sbjct: 11 FLSVSARSQNQDRRASKMPSHKSFMIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRH 70

Query: 85 WRRTKLGF 93
          WRRTKLGF
Sbjct: 71 WRRTKLGF 78

[Close]

BLAST of CmUC05G097450 vs. TAIR 10
Match: AT4G31985.1 (Ribosomal protein L39 family protein )

HSP 1 Score: 102.8 bits (255), Expect = 1.5e-22
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 42 MPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          MPSHK+F IKKKL KKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1  MPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51

[Close]

BLAST of CmUC05G097450 vs. TAIR 10
Match: AT3G02190.1 (Ribosomal protein L39 family protein )

HSP 1 Score: 97.8 bits (242), Expect = 4.7e-21
Identity = 46/51 (90.20%), Postives = 48/51 (94.12%), Query Frame = 0


Query: 42 MPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          MPSHK+F IKKKL KKMRQNRPIP+WIRLRTDN IRYNAKRRHWRRTKLGF
Sbjct: 1  MPSHKSFMIKKKLGKKMRQNRPIPNWIRLRTDNKIRYNAKRRHWRRTKLGF 51

[Close]

BLAST of CmUC05G097450 vs. TAIR 10
Match: AT2G25210.1 (Ribosomal protein L39 family protein )

HSP 1 Score: 90.1 bits (222), Expect = 9.9e-19
Identity = 42/43 (97.67%), Postives = 42/43 (97.67%), Query Frame = 0


Query: 50 IKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          IKKKL KKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 2  IKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 44

The following BLAST results are available for this feature:

BLAST of CmUC05G097450 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024434.1	2.5e-32	90.24	60S ribosomal protein L39, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6585491.1	1.8e-22	78.67	60S ribosomal protein L39, partial [Cucurbita argyrosperma subsp. sororia] >KAG7...	[more]
KAF9662083.1	4.0e-22	73.08	hypothetical protein SADUNF_Sadunf18G0016500 [Salix dunnii]	[more]
XP_022962571.1	9.0e-22	93.33	uncharacterized protein LOC111462968 [Cucurbita moschata]	[more]
PON37200.1	9.0e-22	85.07	Ribosomal protein [Trema orientale] >PON38027.1 Ribosomal protein [Parasponia an...	[more]

BLAST of CmUC05G097450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6KAJ8	4.2e-22	96.08	60S ribosomal protein L39-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39A P...	[more]
P51426	4.2e-22	96.08	60S ribosomal protein L39-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39B P...	[more]
P51425	4.2e-22	96.08	60S ribosomal protein L39 OS=Zea mays OX=4577 GN=RPL39 PE=3 SV=1	[more]
Q5SMI4	1.2e-21	94.12	60S ribosomal protein L39-3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39C P...	[more]
P51424	2.1e-21	94.12	60S ribosomal protein L39-1 OS=Arabidopsis thaliana OX=3702 GN=RPL39A PE=3 SV=2	[more]

BLAST of CmUC05G097450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5ANB0	4.3e-22	85.07	Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_315710 PE=3 SV=...	[more]
A0A2P5AKY6	4.3e-22	85.07	Ribosomal protein OS=Trema orientale OX=63057 GN=TorRG33x02_347900 PE=3 SV=1	[more]
A0A6J1HDM7	4.3e-22	93.33	uncharacterized protein LOC111462968 OS=Cucurbita moschata OX=3662 GN=LOC1114629...	[more]
A0A0A0LM35	9.7e-22	98.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382530 PE=3 SV=1	[more]
A0A3P6CHA1	1.6e-21	82.35	Uncharacterized protein (Fragment) OS=Brassica oleracea OX=3712 GN=BOLC4T27057H ...	[more]

BLAST of CmUC05G097450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31985.1	1.5e-22	94.12	Ribosomal protein L39 family protein	[more]
AT3G02190.1	4.7e-21	90.20	Ribosomal protein L39 family protein	[more]
AT2G25210.1	9.9e-19	97.67	Ribosomal protein L39 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023626	Ribosomal protein L39e domain superfamily	GENE3D	1.10.1620.10	Ribosomal protein L39e	coord: 42..92 e-value: 2.7E-29 score: 102.9
IPR023626	Ribosomal protein L39e domain superfamily	SUPERFAMILY	48662	Ribosomal protein L39e	coord: 44..91
IPR000077	Ribosomal protein L39e	PFAM	PF00832	Ribosomal_L39	coord: 50..90 e-value: 9.8E-22 score: 76.3
IPR000077	Ribosomal protein L39e	HAMAP	MF_00629	Ribosomal_L39e	coord: 42..92 score: 12.866076
None	No IPR available	PANTHER	PTHR19970	RIBOSOMAL PROTEIN L39E	coord: 30..92
None	No IPR available	PANTHER	PTHR19970:SF31	SUBFAMILY NOT NAMED	coord: 30..92
IPR020083	Ribosomal protein L39e, conserved site	PROSITE	PS00051	RIBOSOMAL_L39E	coord: 71..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC05G097450.1	CmUC05G097450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome