CmUC05G097450 (gene) Watermelon (USVL531) v1

Overview
NameCmUC05G097450
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Description60S ribosomal protein L39
LocationCmU531Chr05: 27008888 .. 27010407 (+)
RNA-Seq ExpressionCmUC05G097450
SyntenyCmUC05G097450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGATAAAATAGCATTTGATAGGAGATCGTATTTTAATAAAATAATATTTATTTTTTTGAGTTTAGAGGTTCAATCATACACTCTTAAGTGAAAGCGAAAGTTAGCTTAACTATAATTGACACAAACTTTTTGTAGTAAAAAAACCCATCCTTACAAATTTTACCAATTTTTTGTATTAATAGTATTATTTGCTCACATTCTTTTGTATTTTCTATGAATCCCTCTATTTTTTTTATATAATAATTACAAAAATGAGTACTTGACCAAGTCCACGATTTGCTTTGTAGCGTAAAAAGAAAAGAGAGAAAAAAATATGATTAAAATGTATTAACTGACCAGCATCAATTTATATCTTTAATTAAAATTATGAAATAAAAATGGTATAACTTAAACTCTCTTACAAACAATTTAAAAAGAAAAGAAAAAAAAAAACTCTCTTAAAAATTTTGTTGAACCAATATCGCGTGAAACTTATAATTTGAATAAATTAAACTCCTAAATTTTTATTTGTCAATCAACGTAAACCCTCTATTACTATTACTTTTGAAAATCATCGCTATATTAATTTTCAAATGCGTGTTGCCTTTTCCAACTGTCAATTTTAAAAAATGGACGATTAAAATAAATGTATTGAAGATTTTCAAATTAAAGTCTAAGAATTTAATTGAAATAATTATAAGTTACACACGAATTCAATGTTTAAATTGATACAATTATTCGTTTATAATTTAAATTAATACAACCCTTAAAATTTAAGGGTATAAATTGAAGATTTTTAGTCACAAAATATATCACAAACGGATAATTAAACCGTTGTTGTACATAATTCGGTAGAAAAATAAAAATTAAAAAAAGAAAAAAAGAAAAAAAGAAAAGGAAATTAATGGGCCAGGCTCTACCTTTTGGCCCACGAGCTTCAATATTGGTCGAATTTCTCATTAGCTTTCATTAGTCTAGTAAAGTTGGGCCCAATCAGAAGCCCATTTACTGATAGTAAACATTTGGTTGGGCTGCCCGCGGGCAAATCTCGATTACCCTTCTCAGTGGAGCGTATAAATGTTTTTCGCTACTGATAGGGTTTTTCTTTGTCCCGCCGTCTGCTTCCAAGCTCGCCGTCTATCGCCGGAACTCGAAAATGGTACGTATTGTTATTCGACTCTCTGAACTTTTTTCCCCGTAAACTTGGTGCTATTCATCGTTCTTTAGTGGATGTTTGAACTTCTGCGAGTCTGTAATTCGATTTTCTCTTCCTTTCCAATCCACAGCCGTCTCACAAGACTTTCAGAATCAAGAAGAAGCTCGCGAAGAAGATGAGGCAGAATAGGCCGATCCCGCACTGGATCCGCCTGAGAACCGACAACACGATCAGGTATTAAGCCTACGTTTTTTGAATCTACGTATTTTCCTCTGTATCTGTCTATCTCTTTCTCTCGCATTCTGACGTTTTATATTCGATCGTATTACAGATACAACGCGAAGCGCAGGCACTGGCGTCGCACCAAGCTAGGGTTCTGA

mRNA sequence

ATGTGTGATAAAATAGCATTTGATAGGAGATCTGGAGCGTATAAATGTTTTTCGCTACTGATAGGGTTTTTCTTTGTCCCGCCGTCTGCTTCCAAGCTCGCCGTCTATCGCCGGAACTCGAAAATGCCGTCTCACAAGACTTTCAGAATCAAGAAGAAGCTCGCGAAGAAGATGAGGCAGAATAGGCCGATCCCGCACTGGATCCGCCTGAGAACCGACAACACGATCAGATACAACGCGAAGCGCAGGCACTGGCGTCGCACCAAGCTAGGGTTCTGA

Coding sequence (CDS)

ATGTGTGATAAAATAGCATTTGATAGGAGATCTGGAGCGTATAAATGTTTTTCGCTACTGATAGGGTTTTTCTTTGTCCCGCCGTCTGCTTCCAAGCTCGCCGTCTATCGCCGGAACTCGAAAATGCCGTCTCACAAGACTTTCAGAATCAAGAAGAAGCTCGCGAAGAAGATGAGGCAGAATAGGCCGATCCCGCACTGGATCCGCCTGAGAACCGACAACACGATCAGATACAACGCGAAGCGCAGGCACTGGCGTCGCACCAAGCTAGGGTTCTGA

Protein sequence

MCDKIAFDRRSGAYKCFSLLIGFFFVPPSASKLAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF
Homology
[Close]
BLAST of CmUC05G097450 vs. NCBI nr
Match: KAG7024434.1 (60S ribosomal protein L39, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 148.7 bits (374), Expect = 2.5e-32
Identity = 74/82 (90.24%), Postives = 75/82 (91.46%), Query Frame = 0 

Query: 11 SGAYKCFSLLIGFFFVPPSASKLAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRL 70
          S AYK  SLLIGFF +PPSASKLA   RNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRL
Sbjct: 6  SRAYKASSLLIGFFIIPPSASKLAADCRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRL 65

Query: 71 RTDNTIRYNAKRRHWRRTKLGF 93
          RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 66 RTDNTIRYNAKRRHWRRTKLGF 87

[Close]
BLAST of CmUC05G097450 vs. NCBI nr
Match: KAG6585491.1 (60S ribosomal protein L39, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020407.1 60S ribosomal protein L39, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 115.9 bits (289), Expect = 1.8e-22
Identity = 59/75 (78.67%), Postives = 60/75 (80.00%), Query Frame = 0 

Query: 18 SLLIGFFFVPPSASKLAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIR 77
          SL +GF  V           R SKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIR
Sbjct: 9  SLKLGFLLVVRCPKTSQPVSRISKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIR 68

Query: 78 YNAKRRHWRRTKLGF 93
          YNAKRRHWRRTKLGF
Sbjct: 69 YNAKRRHWRRTKLGF 83

[Close]
BLAST of CmUC05G097450 vs. NCBI nr
Match: KAF9662083.1 (hypothetical protein SADUNF_Sadunf18G0016500 [Salix dunnii])

HSP 1 Score: 114.8 bits (286), Expect = 4.0e-22
Identity = 57/78 (73.08%), Postives = 64/78 (82.05%), Query Frame = 0 

Query: 15 KCFSLLIGFFFVPPSASKLAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDN 74
          KC      +F +   A+  A Y++ +KMPSHKTFRIKKKLAKKMRQNRPIPHWIR+RTDN
Sbjct: 11 KCQGFSFQYFRLQDQAAAEA-YQKQAKMPSHKTFRIKKKLAKKMRQNRPIPHWIRMRTDN 70

Query: 75 TIRYNAKRRHWRRTKLGF 93
          TIRYNAKRRHWRRTKLGF
Sbjct: 71 TIRYNAKRRHWRRTKLGF 87

[Close]
BLAST of CmUC05G097450 vs. NCBI nr
Match: XP_022962571.1 (uncharacterized protein LOC111462968 [Cucurbita moschata])

HSP 1 Score: 113.6 bits (283), Expect = 9.0e-22
Identity = 56/60 (93.33%), Postives = 56/60 (93.33%), Query Frame = 0 

Query: 33  LAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 92
           LA   R SKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 71  LAAGSRFSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 130

[Close]
BLAST of CmUC05G097450 vs. NCBI nr
Match: PON37200.1 (Ribosomal protein [Trema orientale] >PON38027.1 Ribosomal protein [Parasponia andersonii])

HSP 1 Score: 113.6 bits (283), Expect = 9.0e-22
Identity = 57/67 (85.07%), Postives = 60/67 (89.55%), Query Frame = 0 

Query: 26 VPPSASKLAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW 85
          VPPS ++     R +KMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW
Sbjct: 7  VPPSQAR--DLDRPAKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW 66

Query: 86 RRTKLGF 93
          RRTKLGF
Sbjct: 67 RRTKLGF 71

[Close]
BLAST of CmUC05G097450 vs. ExPASy Swiss-Prot
Match: Q6KAJ8 (60S ribosomal protein L39-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39A PE=3 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 4.2e-22
Identity = 49/51 (96.08%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 42 MPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          MPSHKTFRIKKKLAKKMRQNRPIP+WIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1  MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51

[Close]
BLAST of CmUC05G097450 vs. ExPASy Swiss-Prot
Match: P51426 (60S ribosomal protein L39-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39B PE=3 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 4.2e-22
Identity = 49/51 (96.08%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 42 MPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          MPSHKTFRIKKKLAKKMRQNRPIP+WIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1  MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51

[Close]
BLAST of CmUC05G097450 vs. ExPASy Swiss-Prot
Match: P51425 (60S ribosomal protein L39 OS=Zea mays OX=4577 GN=RPL39 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.2e-22
Identity = 49/51 (96.08%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 42 MPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          MPSHKTFRIKKKLAKKMRQNRPIP+WIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1  MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51

[Close]
BLAST of CmUC05G097450 vs. ExPASy Swiss-Prot
Match: Q5SMI4 (60S ribosomal protein L39-3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39C PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-21
Identity = 48/51 (94.12%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 42 MPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          MPSHKTF+IKKKLAKKMRQNRPIP+WIR+RTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1  MPSHKTFQIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 51

[Close]
BLAST of CmUC05G097450 vs. ExPASy Swiss-Prot
Match: P51424 (60S ribosomal protein L39-1 OS=Arabidopsis thaliana OX=3702 GN=RPL39A PE=3 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-21
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 0 

Query: 42 MPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          MPSHK+F IKKKL KKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1  MPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51

[Close]
BLAST of CmUC05G097450 vs. ExPASy TrEMBL
Match: A0A2P5ANB0 (Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_315710 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.3e-22
Identity = 57/67 (85.07%), Postives = 60/67 (89.55%), Query Frame = 0 

Query: 26 VPPSASKLAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW 85
          VPPS ++     R +KMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW
Sbjct: 7  VPPSQAR--DLDRPAKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW 66

Query: 86 RRTKLGF 93
          RRTKLGF
Sbjct: 67 RRTKLGF 71

[Close]
BLAST of CmUC05G097450 vs. ExPASy TrEMBL
Match: A0A2P5AKY6 (Ribosomal protein OS=Trema orientale OX=63057 GN=TorRG33x02_347900 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.3e-22
Identity = 57/67 (85.07%), Postives = 60/67 (89.55%), Query Frame = 0 

Query: 26 VPPSASKLAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW 85
          VPPS ++     R +KMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW
Sbjct: 7  VPPSQAR--DLDRPAKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHW 66

Query: 86 RRTKLGF 93
          RRTKLGF
Sbjct: 67 RRTKLGF 71

[Close]
BLAST of CmUC05G097450 vs. ExPASy TrEMBL
Match: A0A6J1HDM7 (uncharacterized protein LOC111462968 OS=Cucurbita moschata OX=3662 GN=LOC111462968 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.3e-22
Identity = 56/60 (93.33%), Postives = 56/60 (93.33%), Query Frame = 0 

Query: 33  LAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 92
           LA   R SKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 71  LAAGSRFSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 130

[Close]
BLAST of CmUC05G097450 vs. ExPASy TrEMBL
Match: A0A0A0LM35 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382530 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.7e-22
Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 0 

Query: 38 RNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          R SKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 24 RISKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 78

[Close]
BLAST of CmUC05G097450 vs. ExPASy TrEMBL
Match: A0A3P6CHA1 (Uncharacterized protein (Fragment) OS=Brassica oleracea OX=3712 GN=BOLC4T27057H PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.6e-21
Identity = 56/68 (82.35%), Postives = 58/68 (85.29%), Query Frame = 0 

Query: 25 FVPPSASKLAVYRRNSKMPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRH 84
          F+  SA      RR SKMPSHK+F IKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRH
Sbjct: 11 FLSVSARSQNQDRRASKMPSHKSFMIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRH 70

Query: 85 WRRTKLGF 93
          WRRTKLGF
Sbjct: 71 WRRTKLGF 78

[Close]
BLAST of CmUC05G097450 vs. TAIR 10
Match: AT4G31985.1 (Ribosomal protein L39 family protein )

HSP 1 Score: 102.8 bits (255), Expect = 1.5e-22
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 0 

Query: 42 MPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          MPSHK+F IKKKL KKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 1  MPSHKSFMIKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 51

[Close]
BLAST of CmUC05G097450 vs. TAIR 10
Match: AT3G02190.1 (Ribosomal protein L39 family protein )

HSP 1 Score: 97.8 bits (242), Expect = 4.7e-21
Identity = 46/51 (90.20%), Postives = 48/51 (94.12%), Query Frame = 0 

Query: 42 MPSHKTFRIKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          MPSHK+F IKKKL KKMRQNRPIP+WIRLRTDN IRYNAKRRHWRRTKLGF
Sbjct: 1  MPSHKSFMIKKKLGKKMRQNRPIPNWIRLRTDNKIRYNAKRRHWRRTKLGF 51

[Close]
BLAST of CmUC05G097450 vs. TAIR 10
Match: AT2G25210.1 (Ribosomal protein L39 family protein )

HSP 1 Score: 90.1 bits (222), Expect = 9.9e-19
Identity = 42/43 (97.67%), Postives = 42/43 (97.67%), Query Frame = 0 

Query: 50 IKKKLAKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 93
          IKKKL KKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF
Sbjct: 2  IKKKLGKKMRQNRPIPHWIRLRTDNTIRYNAKRRHWRRTKLGF 44

The following BLAST results are available for this feature:
BLAST of CmUC05G097450 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7024434.12.5e-3290.2460S ribosomal protein L39, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG6585491.11.8e-2278.6760S ribosomal protein L39, partial [Cucurbita argyrosperma subsp. sororia] >KAG7... [more]
KAF9662083.14.0e-2273.08hypothetical protein SADUNF_Sadunf18G0016500 [Salix dunnii][more]
XP_022962571.19.0e-2293.33uncharacterized protein LOC111462968 [Cucurbita moschata][more]
PON37200.19.0e-2285.07Ribosomal protein [Trema orientale] >PON38027.1 Ribosomal protein [Parasponia an... [more]
BLAST of CmUC05G097450 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6KAJ84.2e-2296.0860S ribosomal protein L39-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39A P... [more]
P514264.2e-2296.0860S ribosomal protein L39-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39B P... [more]
P514254.2e-2296.0860S ribosomal protein L39 OS=Zea mays OX=4577 GN=RPL39 PE=3 SV=1[more]
Q5SMI41.2e-2194.1260S ribosomal protein L39-3 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL39C P... [more]
P514242.1e-2194.1260S ribosomal protein L39-1 OS=Arabidopsis thaliana OX=3702 GN=RPL39A PE=3 SV=2[more]
BLAST of CmUC05G097450 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P5ANB04.3e-2285.07Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_315710 PE=3 SV=... [more]
A0A2P5AKY64.3e-2285.07Ribosomal protein OS=Trema orientale OX=63057 GN=TorRG33x02_347900 PE=3 SV=1[more]
A0A6J1HDM74.3e-2293.33uncharacterized protein LOC111462968 OS=Cucurbita moschata OX=3662 GN=LOC1114629... [more]
A0A0A0LM359.7e-2298.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G382530 PE=3 SV=1[more]
A0A3P6CHA11.6e-2182.35Uncharacterized protein (Fragment) OS=Brassica oleracea OX=3712 GN=BOLC4T27057H ... [more]
BLAST of CmUC05G097450 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G31985.11.5e-2294.12Ribosomal protein L39 family protein [more]
AT3G02190.14.7e-2190.20Ribosomal protein L39 family protein [more]
AT2G25210.19.9e-1997.67Ribosomal protein L39 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023626Ribosomal protein L39e domain superfamilyGENE3D1.10.1620.10Ribosomal protein L39ecoord: 42..92
e-value: 2.7E-29
score: 102.9
IPR023626Ribosomal protein L39e domain superfamilySUPERFAMILY48662Ribosomal protein L39ecoord: 44..91
IPR000077Ribosomal protein L39ePFAMPF00832Ribosomal_L39coord: 50..90
e-value: 9.8E-22
score: 76.3
IPR000077Ribosomal protein L39eHAMAPMF_00629Ribosomal_L39ecoord: 42..92
score: 12.866076
NoneNo IPR availablePANTHERPTHR19970RIBOSOMAL PROTEIN L39Ecoord: 30..92
NoneNo IPR availablePANTHERPTHR19970:SF31SUBFAMILY NOT NAMEDcoord: 30..92
IPR020083Ribosomal protein L39e, conserved sitePROSITEPS00051RIBOSOMAL_L39Ecoord: 71..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC05G097450.1CmUC05G097450.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome