CmUC01G005360 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC01G005360
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	protein BOLA4, chloroplastic/mitochondrial
Location	CmU531Chr01: 5430403 .. 5441292 (-)
RNA-Seq Expression	CmUC01G005360
Synteny	CmUC01G005360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGGCAATATTAGATGTTGGAGGCGGTCATCAGAGGTAGTTGTTAGAATTAGCCGTCGAAAGTGGTCGTCGAAATTGGCCATCGTGGTTTTGAGTTGTCGTAGATATACATTTGATGAGTTGCTATACCTAACTTTCTCGCTCGATCATTTACTAAATCACAATGAACAACGTGGTTTTGAGTCATAAATTTTATTTATTATTTTTAAAAACTCGAGAAAGCAGTGCTTGTGTGTTAATCAGACAAAACCAAACATAAATATTAAAAACACTCAAAACCATATCAATCTAATGACTAGTTTAAGACTTAGATTAATGAGCATGTCATTTTAATGATTCTATTCTTTGTGAATTCACACGTATTATTTAGCTAGCTTAAATTCACTTAAAATTATATACAATATGACGATAAACACGTACTTTTTAAACTATAATTGAGGTCCCATTTGATAATGATCTTGTTTTCACTTTTCTATTTTTTGAAATTTATGATTGTTTTCTTCCAAATCATCGATATTATAGTCTTCGCCTTTCTTAACTAAACATTTGAATTTATAATCAAATTCTAAAAACAAAAACTGAAAACTACCCTTCCTCCTAGCCCCAAACGTCCTCCATAGAGTTTTCCCAACAAACTTCAAATAATCTATTTCTTTGGAATCCACCATTGGTCGGGTTGTCAAGACCCAACAAGATAATATTGATCTCATTATTCTAACTAGTAGAATAAGTGGTATTAGGTCGAATCCTAATGAGATCTATGTGATCATTTTCTCAATGTTAAATTTTAAAAAATAATAAAATAGAGGGTTTGGTCGTGAAAATAAACAAAAGATAAATATAGAAAAAATACATCTCAATTGAGGTTTCCAATGCAAGTCAAGGCAGTCTCATCTAATTGTAATTCCATTTGAAGATTACCAAATCAAATAAGTCAAACATCCAAGAGGGTGTTTAAGGGACCGTAATGGAATGAGTTTGTAATGTAATGTAATCCAAAATCCATGTTTGGATTAAAACGCCTTGGGTTCAATTGTAATACCAAACTCATCCTATTCTCACAGGCCAGTTTCAACCCAACCCTCTTTTCTACTGCTTTCACACTTCACGGTTCCATTTATGTTTTGCCCCCGATTCCTCACGCATTCCAATACTCTCCAAATTTCAAGTAATCCTAATTACATTTCAGATCTCCAAATAGTCCCTAAGTTTTTAGCCTACTTATTCATTAAAGTCAAGACAAGTTTAATTCTCCTAAGTTTATTGATGGTAACAAAACATTACAATCAACTCTTATTATATAATTAATTGGATACGTTAGCATTTCATATCAACTTGATGGCAAGCATAAATACAACGGAAAATATTACGACAAAATCAATTAAGCAAGATAGTTACACATAAAACAACTTTATTTCTTTTGTACAAGAGTATATCATGTATGCTACGTAATAATTGAAAAGCCATATAACATACCTATGAACCAAAATCTGTGCTGCCAAAATTAGACAAACATTTGAGACAATTACAGATAGATATTAAATTAAACAACCAAACATATTTCTTATTTTTAGATAGTTATGGAATTTTGTAAAGAAAAATATGATTGATAGGTGACCCACTAAAAAATTTAGTTCATTTTCAAATATAGAAAAATGAATCAAAATATTTATAAATATAACAAAGTTTTTGGGATATTTTGTTATTATTTATAAATATTTTTAGCAGTTTTGTCATTTAAAATAATTTTACAAAAATTTATTATTTTCTTTAATATATTATTAATAAGCAAAAACAACAAATTATTTACGATTGAAAAATTATAACAAATAAATAGGAACAAACGATTGAATCAAAGGCATCCGAGGGGTTGGGGCTCACAATTTGTTTAGGTTAAATTATAAATTTGGTCCTATAATTTTGAAACAGTGAGTGGATTAGGTTATTATAACCCATGTTTGGGGCTCAATTATAGACTTTGTGTTTCCAATTATTATAGCCTACAATATTAGTATGTCAAATCTTTACTCATCCTCTATTTTTCTCTTTTTTGTTACATTGTTTATTATTTTCTAGACTATACACCACAACCATAAATTATTATAACCCTAAACTATTATACCCACAACTATAATAAGCACATAGTATAATAACCAATGCCCCAAACACCCTCTTAGAGTTTAGTCCCTACAACTTCAAAAGTTATAATAATTTGATAAATGTTCATAAACATTAATCTTCCTAAATAGTTTTATCTATGGTTTGATAAAATTTTCATGAATAGGAACTAGATTCTAACGATAAATCAAGCAAGGGTTGTTGGAAGGTGAATGTTGATGCCACATGGTCGGAGAACACTCGGAGCGGTGGGACCAGTTGGATTATTCGAGATTGGAATGGTCGCCCTACCAGGGGTGGTTGCATCCCAATATCTACTGGTTGGTCAATCAAAGTCTTAAAAGCTAAAACCATTGTGGATGGTTTAAAGCACATTCTGGCTTATTGGGATGAACAAAACTTGCCAGTGGAGGTGAAATCAAATTCAATTGAAGTCATCAAGTTTTTAAATCGTGAGATGTCTGAATTATCTGAGGCTTATTTTTTTTTTGTTGAGAGGCTCTCTTTATTACTCCTATAAATGTTACTCATTTTTGTAAAATTCATTGAGAGGAGAACAAAACTGCCCATAATCTAGTAGCTTTGACTTCTTCATCTAGGACTTCCTCTTTTTAGAAAGAGTTTAATTCATCTGTATTATTCCTCATCCTCGAGAGGGATTGATGGTTGGTTGTTGGGAGTCAATTCTATTGAATCTCATTTCAAAAAAAAAAAAAAAAAAACGTAGAGAGTAATTATAACTATCAAACTAGATTCTAATTATAAACTATATAGATTAAATTATAATTTGGGATGAAATTTACAATTTAATCAAGTTGCAAATATAGCAATCAGACTTAGAATATTAGCAAATATATCATAATATAAAAAAATTTACAAATATAATAAAATTTGATTGAGTTTTTAGAATTTAAAAAGATTTAAAAATATAACAAAATTTAGATTAAGTGTTTAAAATTTAGGATTGATAGATATATTGACACTAAGAATCTATCCATACATACTCCTGATAAGAGTCCATTGAACCTATCATTAATAATCTTGCTACGTGATTCTTAATTGATAGGTCATTTGTAATTCTTAAAAAAAAAAAGGTTAGCTGTACACTCAATTATTATCCAACCCAATGCAATTACCTTTAACCTTTGTTTATCATGAAATGATGTACTCGAACAAAAAACCCCGAAAAACGAGAGGAGGAGCCACTTCGGACCCAGACCATACATCGGTACGGGAAAGCAAACGAGAACGATAGAACAAACCAATCAAGTAGAGCAGTTCGATCGATTCAGCTGCGGCTAAGACTTTGATGATGATGATTAAGGTTCCTCATGTCGCGTTCCGTCGGGTTCTCCCATTGTTCGTTCACCGCAACCAACCTTTTTCGGTTGTCTCCCGCCAAATCACTTCCACCTGTGTTTGCACCGCCGTTTTCCCCTCAATTACCTCCACATCCCCCACCGGCGTCCGTAGTAAGAGCAGTAATATTGCGAAAAATAGCCGTGCTGAAGGAACATTCCCAAAATGGGGTTCGAGCCGGAACTTGAGCATTAGAGCCACTCAAGTGAATGACTCTGGATCTATTGATTCTCCACTCATGCAGTCAATGGAGAACAAGGTAATGTTTGTTTAGTTTCTAGTTTCTTCATGGTTTTAAATTTATACTTTTCTACGTTTTCATTTATGTGAGCAAACCAGTCCGTATGCTCTTTGAGGGAAATTAGGGCAACTTATTGAGCTAATTTAAGAGGAATGGAATCTCCCAGTCGATTATAGTTCAGAAATGTTCTTAGTAGCACAGCGATAAAGACCTTGACGCCGATTTTATGTGATGGCTTTTGCTTATCTTTTGTTTTCATTTTAACACGTTTATTATCAAATATATGATTTTCAGTTTCTTTTCTGCAAATGTGTATTTGTTTGGAAAACGGATGTAGTTTGTGTTTCTCGCTCCAATATTCTATCCACCAAGTTGTTTAGTTCTAAGGGGAGCCATGTAATTAGAAGGGCTACAAGCACAGCTAGTTGACTTATTCATCCTGAGATCACTTGCGCCCAAAGTCGCATATGTAGCAATGGATGGCATACGTGATCAAAAATCAATTTATTCTCCAAAGAAAAGGATCTGTCCTTCGATGAAATGCAAACAGATTTATACACTCAACCAATCGCTATTACAGTTTAGCTAGCTACTAGCAAAGCCAACATCTGCCACTGAGTAACCAGAAATTCCAGCACGTGAGCGCTGCTGTACATCTGCAGAGCCAATGGTGGCCGGTGGTTCTGAAGGTTTTGATAGAACGTGTTCGAATCTTTCCATTTTTGGTTCTCGTACCGGCTTGGGGTGGTGGTGGACGACGGAAACAACTGGCGACGCTGAGGTGGTAGTCGTGATGGTGGTGGTGGTATAAGTAGTGGGATTATTGGATGATGATTATGAGAACAAATCCATTAATAAAAAAGCAGAAAATTAAAAAGATCAAGGAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAGGAAAAAAAAGAGAAATAGAGTAATCTTTCAAAGACCAGCTTTTTGTCATGGTGGAAGAAGGATCTCATCTTTGGGGGTTTATAAGAGAACCTTTTTCTTAACTAGGAGGTAGGTAGTAAATCAAGTAGTGATTCAAGATGAATATCAAAGGAAGAGAAGAAACAAGAAGTGGGTTTAATTTGCATGCCACGAAGAGATCAAGAAGAACAATGTGAAGGAGATCATAAAGGGATTGACATCATTGATAATATTGAACATGGTCCTTCTTTAAAAAAAAACTGGAAAGAGGGTTGTTTTTGTTTTGTGTTTCTTTAGAAGAAGAGAAATGGAGGAAGGAAGAAGAAGAAGAGAAGGAAAAAAGGTCATGAGTTTATGGTATGAAGAAGGGAAATGAGGAAATTATTAGAGATCAAAGAGAGATCATAAGATTTTCTGTTGGAAAGAAAACTGAGAGTTAAACACTATAGAGAGAGAGGGAGAAAATAAAGGTTGAAATGAGGAGTAAAGTTAGTAGTGGGAACAATAGTAAATAGGCATAAAGTTTTGTCCTTGGTAAGGACAAAAAAAAAGGGCTTTGTTGGCAAAATGGTTATGGCATTTTCCCCTTGAAAATGAATCTTTATGGCATAGGGTCATTGTTAGGAAGCATGACTCATCCATTTGAGTGGTCGTTGAGTGGGGTTAGAGGCACATTTCAGAATCTATGGAAGGATATTTCTCGAGAGCTACCCTCCTTTTCCCATCTCGTTTGTTGTGTGGTGGGGAAAGGTAAGAAAACATATTTTTGGGAAGATTAGTGGGTGGGGGATAAACCTCTCTGCTCCTCATTTTCTTGTTTATATCATTTATCTTTCTTTAAAAATTATATAATCTCTAATCTGTTGGTTTGGTCGAGGAGCTTGGTTGTTGCCGTTTGTTGATCGATGAGGAAACAACAAATGTTGCCTCTCTTCTGTCCTTGATAGGGGAGGTTAATTTTATTCTTGGGAGAAGGGATATTCGTATTTGGAGTCTTGATCCCTAGTGGGTTTCTCTTGTAAGTCCTTTTTTCGGCATTTATTGGATCCGACTCCCATTAGCGAATTTGTTTTTGACTTCTTATGGAGGATTAAGATTCCTAAGAAAGTTAAGTTCTTTTCCTTACAACTTTTATTTGATTGTGTGAATATTATGGACCAACTTTCTAGGAAGCTACCCTCGCTAGTGGGCCCTTGCTGTTGTACTCGTGTTGGAAGGTGGAGGAAAACCTGGATCACTTGCTTTGGACGTGTGACTTTGTGAGGACAATGTGGAATAGTTTCTTTTAGGAGTTTGGTTTTGTGTCTGTTCATCATTGAGATATTTTCTTTGAAATAAAAACAAACTTTTCATTGAATTAATGAAATGAGACTAATGCTCAAAGTACATGAGAGAAAATAAGACTTAGAACTCAAACTTGCCAATATAAAATAAGAAATAAAACAAGACTAAATAGAGAGTCTTCAGTATCCACCGAACAAAGAGAACTAATTGAGGGCAAGAGAGAGTGACTTGGAAGCTTCAGAATTTGAGCAAATAAATGCCCCAAAGATCCTAACCCAAAAGTAATATAACTCTCCGTAGACAGCTTGAAATCCACAAAGGTTTGTACAGCTTGATAATCATGGGAGGAGATGCCACCAATGAGTTTGAAAAGAGAATTAACTGGGAATGAACCTGAAGAATCCAATTCTAACACTTCATCTTCCTTAAAAAAAACTTCTAAATATGAATGACCATAGTTGAGCAACTGGATCGCAATGATCAAGTACAAAACCTTTGGGATTGGAAGCAGATCTTAGTAAACTTGGGGAGAGAGAACTCAAAGAAGAAGTGTTCAGCCAAGTAACTTGCCAAAATGAAATTCTTCTTCCATTGCCGAGTTTAAAGGAGATCAGATATTCAACCAACCAGAAATCAATTTTATGCCTAGCGCATAATGTTTAAGACTCCTCCCAAGCACCGAGGATCAGAAATATAATGAGAGAGGGATAACAATTCTGACCAAAGGAATCTTCTTTCCTTGTAGTAACCATAATCAATTGTAATCCAAATGGGCTTCATGCACTTGCAATGAGTCAAAAACGTTGACATGTAGCCTCCTTTTAAAACTTCTAAATCCACAGGCTCTCCCTTCCCATGAGATTATCAATCCTCCAAATTTTCCAAAAGACTCCACAAAATTCCAGCCAATATCTCCTGAACTCCCCATTGATTTTATTAAATAATGACAAAATCCTCCCTTTTTGGTCTCCTGAATTAGAACTAAAGTTCTGATTTTTGATGAGGTTCGGGTTTTTGGGTCTTCATTCCACGACAACATTTCCCAAATTTTGGTTGGTCCTTCATTGCCCTCTAAAGCTCAACTATTATGGTCAAATGCGGTAAAAGCCATATTATCAGAAATTTGGTTTGAACACAATCAAAGGGTCTTCCATGACAAGTCTATTGATTGGTTGGAACGCTCGGCTTCTTGCATCTACTTGGTATTCACAATCCAAATACTTTGCTGAATATTCTATCCAAGACATATACCTAAATTGGAATGCTTTCATTCCTTTAGATTAATTATGTATTTTTGACGTTATGTCTCTCAAGTTGCTCTTTTCAATGTACTTTTGTAAAGGAAGATGAGGAGGGTGCTAAGGTGTCAACCTAGTTGAGATAGTCGGATACGCTCATTGGTTATAAACCATTGTAGTCATGTTATCTCATTTGAAACTTGGTTTCAACATTTCATTGTAACTTGAGCATTAGACTCTTTTCATTACATCAATGAAAAAGTTTAGTTTCCGTTTCAAAAAAAAAAAAAAAAAAAGAGGTTTTTTAGAGCAACTATTTGGAAATATCCCCAAGCCCTCTGGTAATCCATGAAATAATTTTCATACTGAAGATAAAAAAGAAAGGACTTTTACTTCACCTGATGAGGCAATTGACAAGAAACTTGACCCAATTGGATCCCACAAACTTCCACTATTGTGTTAAGGCTAGAAGGATCTGCGAAGGCAACAAAGATGTGAAACTTACTTGATTTGGCTGGGAAACGGAGTTTTCAACTGAATTTTGGAATAAGCTTTCCATGACTTCTCCATATTAATCTTCTGAAAATTGAGAATCTGGAATCGATGTCAATGATTGATAGTCATCTTCCTCACTACTCACACTTGCTGAGTTTGAATCATCTTTTGAATCTATTGGAGACAAGGGGCATTTTTGGGAAGAAAGGCAGGGAATACTTTTCCTGATCTTGATTGAAGAATCCGGTAGAATGATGGTGAATCTTTTAAACCCTGAGAGGGATGGTCTAATTTTGAGGATCCCAACCGCTTTGAGGATTAACTTGAGATCTGAGCAATTACACAACTGATTTCAATGGCATTATTATTGATCTTTTGAAGCCTGGAGAATTTAGAAGATGCTTTTTGTCTTGAGTAATGAAATGGAAATGCTGGAGTTAAAGATCCGACTGTTTCTTCTCTTTTTCCAAATTGAAGCTGAAATCTGACATTTTCCCTCCAAAAATTGATAAATATTAGAGATTGTTTATTGGAGATTTGATCGAGGAGTTTCTCGCCCTTCTGCCTTTTAAGGAGAAGGGTCAATTCTTGTGGTTAGCAGGGGTGTGTGCTTGTGGGATCTTTGGGGGCAAGAAATAATAGGATTTTAGAGGAGTGGAGAGGGACCCTAGTGCTGTTTGGTCCTTACTCCTTGGTGAGTTTTCATGTTTCTCTTTGGGTTTCGATTTCGACAACTTTTTGTAATATTCCATCGACAACATTATACCTAGTTGGTCCCCTTTTCTTTTTAGGAGATTTTTGTAGGGCTTGACATTTGTATGCTTATGTGTACTTCCATTTTCTCTAAGTGAAAACAATTGTTTCTATAATACAAAGGCAAGGTTGTGAGTCATGTCAAACTGAGGACAATCAAAAGCTTAGAAGTACATTCCAACATCATGTCAAACCTAGGACTATCAAATGTGATAGGAACCAAAACACACACAAGATAACAAAATAATTCGAGATACTTGGACCTTCCCCTCTTGAACACACTTACGAGATAACCAAATAATTTGAGATACTTGGACCCTCCCCTCTTGAGACCTCTTTCAAGGCCTAATTCACTCTTCAAGATAATGCCTATCTTTCCTAATTTCCTTCTCTCTATTTTTATATCCAAATTTCATCATTTATGGTTAGAAAACAGAAGCTTTGCAGTCCTTGTCTTGAATATTTATTGAAATTAGTCTGGTAAAGTGTGTTTGAATGGAAATTGTTATTTCTTTCTAGAGTTTTTTCTTCAGAGTTGTGGCTGTCTCTTTCAAGATGATTAAAATTTTGTTTGTTTAGTTGACTTTTCAAATTTCTTCATCAGATTAAGGAACAACTAGATGCACAATCTGTCTCGGTGAAAGATGCTTATGGGGATGGACGACATGTTAGGTGAGGACTTTTTCCCTACAGTTGCTTTTCTATGGTAGCTTAGTGTAAGAAGCTTGATCTTTCCAGAATGCCTGAGAAATGTATATACTGGGCAGAAAAAAAAAGGAAACATTTTCTTTTCTTCCATTTGTTCCTGATTCACGTTTGGTTTTCTTATAAAATTTGTTTGCCTTCAAAATTCAAATCATGGTGTTTAAAGACTCCAATCGTCCAGAGCTCGTTAGCAGATTTTTTTTCTTCGAGTCTTTTAGCAATGAAACAGAAAATAGGAAAATTATCATAAATAGAAAAAATATCGAACTGTTTACAAATATAGCGAAATTTTACTTTCTATTTGTGATAGACTGTGATAGACCGTGATAGACCCAAATAGACATTTATCCGTGTGATAAATGTCTATTTGGGTCTATCGCAGTCTATCACAGATAGAAAGTAAAATTTTGCTATATTTGTAATTATTTTCAATAGTTTTTCTATTTTTGGAAACATCCCGAAAAAATATTGAGACTTACGTTTGAATTGGAGCACATTTATTTTTCCTAAATAGGTCTTATGTTTAACTAAATTAAGTTAGTATTATTATTTTATTTGTGTCATTGTATTTTGAGCATTAGCCCCTTTTTATAGCCCCTTTTTATTTCACGAATTATAATTTTCATTAAAAAAAAAAAAAAAGAAGAAGAAGAAAACAAAACAAAAGAAAAAAGTTGAATTGAGAGCCCAAAGAGAGGTATTGGAGGTGGGGGCCGTTTCATTGTCTTGCGAGGTAAATATATACATATTTTGTCTGTTAAATGTATATATAGTCTAGCAAAAAAAACTTTGGTATACAGTTTGTATGGGAGTGAGTTTGATAGGAATTAAAACACAATCAAACTATATTGAAATGTAAATGACTGTGAATGACTAAAACTTAGAGAGATAACCAAGTAATTCGAAGTACTCGGACCTTTCCCTCTTGAGACCTCTTCAAGTCCTAATTCATTCATCAAGATAATATCTATCTTCCCTATCTTTCCTATTCTCCTTTCTCTCTATTTATAACCAAATTCCATAACCAACTCCCCCATCTAATTACTAATTACTAATATACTCTTAATATCCGCTGAACACCCTAATACTATTCCTATGAGAGATCGAAAGCCCTTTTGGCATCTGTTTCTTGCCAAATCATAGTTTATGACCTATGGGTTTTCTATCCTTCAAATCTCTGATATTTCAAGTTTAAATTTAACATTTTCCATAAAGATGGTCCCTCTCCTTTAGCTTATTCGAAGACTTCCCATTCTTGTAAATGATTGATGTCCCTAATTTGAGTCTTGTATATTTTGATCAAAAGGTAAGAAGATTGAATCTCTACCTCTGCATATTGTTGGACTAAAAAAAATGATCCTGGGCCTCCAATATATTTCCCTAATAAATTGATCAAACGTCTTTATATCTGTTTTACCTACTTGAACATCCCGTGGTGCACTCCTCTTAAAAAAGTTCATTGAGAGGCATATTGGTTAGGGAGTTTCCTGTAGTTTGCATGTAACGTTGAAGTATAATTGGCTTCATAAGCCATATCCAAAGAACAAATCAAGATGAATTGATTACTCAATTAAGTTAATTTTGCTTGCAGCATTGATGTTGTTTCTTCAGCCTTTGAGGGACAGACGGCTGTGAATAGGCAGAGGATGGTATACAAAGCTATTTGGGAAGAGCTACAAAGCACAGTGCATGCAGTGGATCAAATGACCACCAAAACACCTGCTGAAGCAGCAGCTCAGAATTCATAA

mRNA sequence

ATGATTGGCAATATTAGATGTTGGAGGCGGTCATCAGAGGAACTAGATTCTAACGATAAATCAAGCAAGGGTTGTTGGAAGGTGAATGTTGATGCCACATGGTCGGAGAACACTCGGAGCGGTGGGACCAGTTGGATTATTCGAGATTGGAATGGTCGCCCTACCAGGGGTGGTTGCATCCCAATATCTACTGGTTGGTCAATCAAAGTCTTAAAAGCTAAAACCATTGTGGATGGTTTAAAGCACATTCTGGCTTATTGGGATGAACAAAACTTGCCAGTGGAGGTGAAATCAAATTCAATTGAAGTCATCAAGTTTTTAAATCCTGCGGCTAAGACTTTGATGATGATGATTAAGGTTCCTCATGTCGCGTTCCGTCGGGTTCTCCCATTGTTCGTTCACCGCAACCAACCTTTTTCGGTTGTCTCCCGCCAAATCACTTCCACCTGTGTTTGCACCGCCGTTTTCCCCTCAATTACCTCCACATCCCCCACCGGCGTCCGTAGTAAGAGCAGTAATATTGCGAAAAATAGCCGTGCTGAAGGAACATTCCCAAAATGGGGTTCGAGCCGGAACTTGAGCATTAGAGCCACTCAAGTGAATGACTCTGGATCTATTGATTCTCCACTCATGCAGTCAATGGAGAACAAGATTAAGGAACAACTAGATGCACAATCTGTCTCGGTGAAAGATGCTTATGGGGATGGACGACATGTTAGCATTGATGTTGTTTCTTCAGCCTTTGAGGGACAGACGGCTGTGAATAGGCAGAGGATGGTATACAAAGCTATTTGGGAAGAGCTACAAAGCACAGTGCATGCAGTGGATCAAATGACCACCAAAACACCTGCTGAAGCAGCAGCTCAGAATTCATAA

Coding sequence (CDS)

ATGATTGGCAATATTAGATGTTGGAGGCGGTCATCAGAGGAACTAGATTCTAACGATAAATCAAGCAAGGGTTGTTGGAAGGTGAATGTTGATGCCACATGGTCGGAGAACACTCGGAGCGGTGGGACCAGTTGGATTATTCGAGATTGGAATGGTCGCCCTACCAGGGGTGGTTGCATCCCAATATCTACTGGTTGGTCAATCAAAGTCTTAAAAGCTAAAACCATTGTGGATGGTTTAAAGCACATTCTGGCTTATTGGGATGAACAAAACTTGCCAGTGGAGGTGAAATCAAATTCAATTGAAGTCATCAAGTTTTTAAATCCTGCGGCTAAGACTTTGATGATGATGATTAAGGTTCCTCATGTCGCGTTCCGTCGGGTTCTCCCATTGTTCGTTCACCGCAACCAACCTTTTTCGGTTGTCTCCCGCCAAATCACTTCCACCTGTGTTTGCACCGCCGTTTTCCCCTCAATTACCTCCACATCCCCCACCGGCGTCCGTAGTAAGAGCAGTAATATTGCGAAAAATAGCCGTGCTGAAGGAACATTCCCAAAATGGGGTTCGAGCCGGAACTTGAGCATTAGAGCCACTCAAGTGAATGACTCTGGATCTATTGATTCTCCACTCATGCAGTCAATGGAGAACAAGATTAAGGAACAACTAGATGCACAATCTGTCTCGGTGAAAGATGCTTATGGGGATGGACGACATGTTAGCATTGATGTTGTTTCTTCAGCCTTTGAGGGACAGACGGCTGTGAATAGGCAGAGGATGGTATACAAAGCTATTTGGGAAGAGCTACAAAGCACAGTGCATGCAGTGGATCAAATGACCACCAAAACACCTGCTGAAGCAGCAGCTCAGAATTCATAA

Protein sequence

MIGNIRCWRRSSEELDSNDKSSKGCWKVNVDATWSENTRSGGTSWIIRDWNGRPTRGGCIPISTGWSIKVLKAKTIVDGLKHILAYWDEQNLPVEVKSNSIEVIKFLNPAAKTLMMMIKVPHVAFRRVLPLFVHRNQPFSVVSRQITSTCVCTAVFPSITSTSPTGVRSKSSNIAKNSRAEGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQNS

Homology

[Close]

BLAST of CmUC01G005360 vs. NCBI nr
Match: XP_038906458.1 (protein BOLA4, chloroplastic/mitochondrial [Benincasa hispida])

HSP 1 Score: 298.5 bits (763), Expect = 6.2e-77
Identity = 159/178 (89.33%), Postives = 168/178 (94.38%), Query Frame = 0


Query: 115 MMMIKVPHVAFRRVLPLFVHRNQPFSVVSRQITSTCVC-TAVFPSITSTSPTGVRSKSSN 174
           MMMIKVPHVAFRRVLPLFVH NQPFSVVSRQITS CVC  AV  +ITSTS TGVRSKSSN
Sbjct: 1   MMMIKVPHVAFRRVLPLFVHHNQPFSVVSRQITSNCVCNAAVVAAITSTSTTGVRSKSSN 60

Query: 175 IAKNSRAEGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 234
           +A+ SR+ GTFPKWGSSR+LSIRATQVN+SGSIDSPLM+SMENKIK+QLDAQSVSVKDAY
Sbjct: 61  LARYSRSNGTFPKWGSSRSLSIRATQVNESGSIDSPLMKSMENKIKDQLDAQSVSVKDAY 120

Query: 235 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQNS 292
           GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAAA NS
Sbjct: 121 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAHNS 178

[Close]

BLAST of CmUC01G005360 vs. NCBI nr
Match: XP_004143637.1 (protein BOLA4, chloroplastic/mitochondrial [Cucumis sativus] >KGN50406.1 hypothetical protein Csa_000569 [Cucumis sativus])

HSP 1 Score: 294.3 bits (752), Expect = 1.2e-75
Identity = 158/177 (89.27%), Postives = 166/177 (93.79%), Query Frame = 0


Query: 116 MMIKVPHVAFRRVLPLFVHRNQPFSVVSRQITSTCVCT-AVFPSITSTSPTGVRSKSSNI 175
           MMIKVP VAFRRVLP+F+ RN+PFSVVSRQ+TS CVCT AV   I STS TG+RSKSSN+
Sbjct: 1   MMIKVPQVAFRRVLPIFLPRNRPFSVVSRQVTSNCVCTPAVVAVIISTSTTGLRSKSSNV 60

Query: 176 AKNSRAEGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG 235
           AK SRA GTFPKWGSSRNLSIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG
Sbjct: 61  AKYSRANGTFPKWGSSRNLSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG 120

Query: 236 DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQNS 292
           DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAAAQNS
Sbjct: 121 DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 177

[Close]

BLAST of CmUC01G005360 vs. NCBI nr
Match: XP_008467240.1 (PREDICTED: protein BOLA4, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 290.4 bits (742), Expect = 1.7e-74
Identity = 157/178 (88.20%), Postives = 164/178 (92.13%), Query Frame = 0


Query: 115 MMMIKVPHVAFRRVLPLFVHRNQPFSVVSRQITSTCVCT-AVFPSITSTSPTGVRSKSSN 174
           M MIKVP +AFRRVLP+ + RNQPFSVVSRQITS CVCT AV   ITS S TG+RSKSSN
Sbjct: 1   MTMIKVPQLAFRRVLPMLLPRNQPFSVVSRQITSNCVCTAAVVAVITSKSNTGLRSKSSN 60

Query: 175 IAKNSRAEGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 234
           + K SRA GTFPKWGSSRNLSIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSVSVKDAY
Sbjct: 61  VVKYSRANGTFPKWGSSRNLSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 120

Query: 235 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQNS 292
           GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAAAQNS
Sbjct: 121 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 178

[Close]

BLAST of CmUC01G005360 vs. NCBI nr
Match: KAA0055158.1 (protein BOLA4 [Cucumis melo var. makuwa])

HSP 1 Score: 288.1 bits (736), Expect = 8.4e-74
Identity = 156/178 (87.64%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 115 MMMIKVPHVAFRRVLPLFVHRNQPFSVVSRQITSTCVCT-AVFPSITSTSPTGVRSKSSN 174
           M MIKVP +AFRRVLP+ + RNQPFSVVSRQITS CVCT AV   ITS S TG+RSKSSN
Sbjct: 1   MTMIKVPQLAFRRVLPMLLPRNQPFSVVSRQITSNCVCTAAVVAVITSKSNTGLRSKSSN 60

Query: 175 IAKNSRAEGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 234
           + K SRA GTFPKWGSSRN SIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSVSVKDAY
Sbjct: 61  VVKYSRANGTFPKWGSSRNSSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 120

Query: 235 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQNS 292
           GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAAAQNS
Sbjct: 121 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 178

[Close]

BLAST of CmUC01G005360 vs. NCBI nr
Match: XP_022159690.1 (protein BOLA4, chloroplastic/mitochondrial [Momordica charantia])

HSP 1 Score: 269.6 bits (688), Expect = 3.1e-68
Identity = 145/177 (81.92%), Postives = 158/177 (89.27%), Query Frame = 0


Query: 115 MMMIKVPHVAFRRVLPLFVHRNQPFSVVSRQITSTCVCTAVFPSITSTSPTGVRSKSSNI 174
           M M++VP VAFRRVLPLFVHR+ PF VVSRQIT+ CV TA   +I+S + T VR KSSN+
Sbjct: 1   MAMVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAA-AAISSRTTTSVRCKSSNV 60

Query: 175 AKNSRAEGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG 234
           AK   A GTF KWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSV+VKDAYG
Sbjct: 61  AKYGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYG 120

Query: 235 DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQNS 292
           DGRHVSIDV+SSAFEGQ+AVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAA +NS
Sbjct: 121 DGRHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS 176

[Close]

BLAST of CmUC01G005360 vs. ExPASy Swiss-Prot
Match: Q9LF68 (Protein BOLA4, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=BOLA4 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.7e-32
Identity = 85/157 (54.14%), Postives = 106/157 (67.52%), Query Frame = 0


Query: 131 LFVHRNQPFSVVSRQIT--STCVCTAVFPSITSTSPTGVRSKSSNIAKNSRAEGTFPKWG 190
           LF    +PF+  S  +   +   C +   S   T+P+ +        + SR  G      
Sbjct: 25  LFQSSKRPFASFSAPLVRFTNSRCVSAVLSRKETAPSSIYGN-----RVSRVSGFGALDI 84

Query: 191 SSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGDGRHVSIDVVSSAF 250
            S N S +++Q+ND+GSID  LMQSME KIKEQL+A+SV+V D  GDGRHV I+VVSSAF
Sbjct: 85  RSLNFSTKSSQINDAGSIDQTLMQSMELKIKEQLNAESVTVTDMSGDGRHVCINVVSSAF 144

Query: 251 EGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAE 286
           EGQ+AVNRQRMVYKAIWEELQ+ VHAVDQMTTKTP+E
Sbjct: 145 EGQSAVNRQRMVYKAIWEELQNVVHAVDQMTTKTPSE 176

[Close]

BLAST of CmUC01G005360 vs. ExPASy TrEMBL
Match: A0A0A0KRR5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172860 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 5.7e-76
Identity = 158/177 (89.27%), Postives = 166/177 (93.79%), Query Frame = 0


Query: 116 MMIKVPHVAFRRVLPLFVHRNQPFSVVSRQITSTCVCT-AVFPSITSTSPTGVRSKSSNI 175
           MMIKVP VAFRRVLP+F+ RN+PFSVVSRQ+TS CVCT AV   I STS TG+RSKSSN+
Sbjct: 1   MMIKVPQVAFRRVLPIFLPRNRPFSVVSRQVTSNCVCTPAVVAVIISTSTTGLRSKSSNV 60

Query: 176 AKNSRAEGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG 235
           AK SRA GTFPKWGSSRNLSIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG
Sbjct: 61  AKYSRANGTFPKWGSSRNLSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG 120

Query: 236 DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQNS 292
           DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAAAQNS
Sbjct: 121 DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 177

[Close]

BLAST of CmUC01G005360 vs. ExPASy TrEMBL
Match: A0A1S3CT29 (protein BOLA4, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103504639 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 8.2e-75
Identity = 157/178 (88.20%), Postives = 164/178 (92.13%), Query Frame = 0


Query: 115 MMMIKVPHVAFRRVLPLFVHRNQPFSVVSRQITSTCVCT-AVFPSITSTSPTGVRSKSSN 174
           M MIKVP +AFRRVLP+ + RNQPFSVVSRQITS CVCT AV   ITS S TG+RSKSSN
Sbjct: 1   MTMIKVPQLAFRRVLPMLLPRNQPFSVVSRQITSNCVCTAAVVAVITSKSNTGLRSKSSN 60

Query: 175 IAKNSRAEGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 234
           + K SRA GTFPKWGSSRNLSIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSVSVKDAY
Sbjct: 61  VVKYSRANGTFPKWGSSRNLSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 120

Query: 235 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQNS 292
           GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAAAQNS
Sbjct: 121 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 178

[Close]

BLAST of CmUC01G005360 vs. ExPASy TrEMBL
Match: A0A5A7UJH5 (Protein BOLA4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00900 PE=3 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 4.1e-74
Identity = 156/178 (87.64%), Postives = 163/178 (91.57%), Query Frame = 0


Query: 115 MMMIKVPHVAFRRVLPLFVHRNQPFSVVSRQITSTCVCT-AVFPSITSTSPTGVRSKSSN 174
           M MIKVP +AFRRVLP+ + RNQPFSVVSRQITS CVCT AV   ITS S TG+RSKSSN
Sbjct: 1   MTMIKVPQLAFRRVLPMLLPRNQPFSVVSRQITSNCVCTAAVVAVITSKSNTGLRSKSSN 60

Query: 175 IAKNSRAEGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 234
           + K SRA GTFPKWGSSRN SIRATQVN+SGSIDSPLMQSMENKIKEQLDAQSVSVKDAY
Sbjct: 61  VVKYSRANGTFPKWGSSRNSSIRATQVNESGSIDSPLMQSMENKIKEQLDAQSVSVKDAY 120

Query: 235 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQNS 292
           GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAAAQNS
Sbjct: 121 GDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAAQNS 178

[Close]

BLAST of CmUC01G005360 vs. ExPASy TrEMBL
Match: A0A6J1DZG6 (protein BOLA4, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC111026033 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.5e-68
Identity = 145/177 (81.92%), Postives = 158/177 (89.27%), Query Frame = 0


Query: 115 MMMIKVPHVAFRRVLPLFVHRNQPFSVVSRQITSTCVCTAVFPSITSTSPTGVRSKSSNI 174
           M M++VP VAFRRVLPLFVHR+ PF VVSRQIT+ CV TA   +I+S + T VR KSSN+
Sbjct: 1   MAMVRVPQVAFRRVLPLFVHRDVPFLVVSRQITTNCVRTAA-AAISSRTTTSVRCKSSNV 60

Query: 175 AKNSRAEGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYG 234
           AK   A GTF KWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSV+VKDAYG
Sbjct: 61  AKYGSANGTFSKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVTVKDAYG 120

Query: 235 DGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQNS 292
           DGRHVSIDV+SSAFEGQ+AVNRQRMVYKAIWEELQSTVHAVDQMTT+TPAEAA +NS
Sbjct: 121 DGRHVSIDVISSAFEGQSAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPAEAAVKNS 176

[Close]

BLAST of CmUC01G005360 vs. ExPASy TrEMBL
Match: A0A6J1K139 (protein BOLA4, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111491454 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.8e-66
Identity = 143/180 (79.44%), Postives = 155/180 (86.11%), Query Frame = 0


Query: 113 TLMMMIKVPHVAFRRVLPLFVHRNQPFSVVSRQITSTCVCT-AVFPSITSTSPTGVRSKS 172
           T   MIKVP VAFRRVLPLFVHRN+ F +VS+Q T+ CV T AV  +IT+T+ TGV SKS
Sbjct: 2   TSTRMIKVPQVAFRRVLPLFVHRNEQFFIVSQQFTTNCVRTAAVSAAITTTTATGVCSKS 61

Query: 173 SNIAKNSRAEGTFPKWGSSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKD 232
           SN+ K S   G F  WGSSRN+ +RATQVNDSGSIDSPLMQSMENKIKEQL+AQSVSVKD
Sbjct: 62  SNVLKFSYVNGRFSNWGSSRNMCVRATQVNDSGSIDSPLMQSMENKIKEQLEAQSVSVKD 121

Query: 233 AYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQNS 292
           AYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTT+TP EA AQNS
Sbjct: 122 AYGDGRHVSIDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTRTPTEAEAQNS 181

[Close]

BLAST of CmUC01G005360 vs. TAIR 10
Match: AT5G17560.1 (BolA-like family protein )

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-33
Identity = 85/157 (54.14%), Postives = 106/157 (67.52%), Query Frame = 0


Query: 131 LFVHRNQPFSVVSRQIT--STCVCTAVFPSITSTSPTGVRSKSSNIAKNSRAEGTFPKWG 190
           LF    +PF+  S  +   +   C +   S   T+P+ +        + SR  G      
Sbjct: 25  LFQSSKRPFASFSAPLVRFTNSRCVSAVLSRKETAPSSIYGN-----RVSRVSGFGALDI 84

Query: 191 SSRNLSIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDAYGDGRHVSIDVVSSAF 250
            S N S +++Q+ND+GSID  LMQSME KIKEQL+A+SV+V D  GDGRHV I+VVSSAF
Sbjct: 85  RSLNFSTKSSQINDAGSIDQTLMQSMELKIKEQLNAESVTVTDMSGDGRHVCINVVSSAF 144

Query: 251 EGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAE 286
           EGQ+AVNRQRMVYKAIWEELQ+ VHAVDQMTTKTP+E
Sbjct: 145 EGQSAVNRQRMVYKAIWEELQNVVHAVDQMTTKTPSE 176

[Close]

BLAST of CmUC01G005360 vs. TAIR 10
Match: AT4G26500.1 (chloroplast sulfur E )

HSP 1 Score: 44.3 bits (103), Expect = 2.0e-04
Identity = 28/87 (32.18%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 214 MENKIKEQLDAQSVSVKD--------------AYGDGR-HVSIDVVSSAFEGQTAVNRQR 273
           +  K++++LD   + V+D              A  DG  H ++ +VS AF+G++ V R R
Sbjct: 285 IREKLEKELDPVELEVEDVSYQHAGHAAVRGSAGDDGETHFNLRIVSDAFQGKSLVKRHR 344

Query: 274 MVYKAIWEELQSTVHAVDQMTTKTPAE 286
           ++Y  + +EL+S +HA+  +  KTPAE
Sbjct: 345 LIYDLLQDELKSGLHAL-SIVAKTPAE 370

[Close]

BLAST of CmUC01G005360 vs. TAIR 10
Match: AT1G55805.1 (BolA-like family protein )

HSP 1 Score: 42.7 bits (99), Expect = 5.7e-04
Identity = 45/170 (26.47%), Postives = 78/170 (45.88%), Query Frame = 0


Query: 134 HRNQPFSVVSRQITSTCVCTAVFPSITSTSPTGVRSKSSNIAKNSRAEGTFPKWGSSRNL 193
           HR QP       + S     +VF S+     +   SKS+     S A  +  K GS    
Sbjct: 14  HRTQP-------LKSPVNSPSVFISVPKFFNS--ESKSTGTGSRSVAMSSVEKTGS---- 73

Query: 194 SIRATQVNDSGSIDSPLMQSMENKIKEQLDAQSVSVKDA-------------YGDGRHVS 253
                   DSG+I++   + M  K++++L+   + ++D                D  H +
Sbjct: 74  --------DSGAIENRASR-MREKLQKELEPVELVIEDVSYQHAGHAGMKGRTDDETHFN 133

Query: 254 IDVVSSAFEGQTAVNRQRMVYKAIWEELQSTVHAVDQMTTKTPAEAAAQN 291
           + +VS  FEG   V R R+VY  + EEL + +HA+  + +KTP+E+ +++
Sbjct: 134 VKIVSKGFEGMNLVKRHRLVYHLLREELDTGLHAL-SIVSKTPSESPSKD 160

The following BLAST results are available for this feature:

BLAST of CmUC01G005360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038906458.1	6.2e-77	89.33	protein BOLA4, chloroplastic/mitochondrial [Benincasa hispida]	[more]
XP_004143637.1	1.2e-75	89.27	protein BOLA4, chloroplastic/mitochondrial [Cucumis sativus] >KGN50406.1 hypothe...	[more]
XP_008467240.1	1.7e-74	88.20	PREDICTED: protein BOLA4, chloroplastic/mitochondrial [Cucumis melo]	[more]
KAA0055158.1	8.4e-74	87.64	protein BOLA4 [Cucumis melo var. makuwa]	[more]
XP_022159690.1	3.1e-68	81.92	protein BOLA4, chloroplastic/mitochondrial [Momordica charantia]	[more]

BLAST of CmUC01G005360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF68	1.7e-32	54.14	Protein BOLA4, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=BO...	[more]

BLAST of CmUC01G005360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRR5	5.7e-76	89.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172860 PE=3 SV=1	[more]
A0A1S3CT29	8.2e-75	88.20	protein BOLA4, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC1035046...	[more]
A0A5A7UJH5	4.1e-74	87.64	Protein BOLA4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00900 ...	[more]
A0A6J1DZG6	1.5e-68	81.92	protein BOLA4, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1K139	1.8e-66	79.44	protein BOLA4, chloroplastic/mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of CmUC01G005360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17560.1	1.2e-33	54.14	BolA-like family protein	[more]
AT4G26500.1	2.0e-04	32.18	chloroplast sulfur E	[more]
AT1G55805.1	5.7e-04	26.47	BolA-like family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002634	BolA protein	PFAM	PF01722	BolA	coord: 233..285 e-value: 4.6E-13 score: 49.3
None	No IPR available	GENE3D	3.10.20.90		coord: 187..290 e-value: 4.2E-23 score: 83.6
None	No IPR available	PANTHER	PTHR46230	FAMILY NOT NAMED	coord: 146..290
None	No IPR available	PANTHER	PTHR46230:SF4	PROTEIN BOLA4, CHLOROPLASTIC/MITOCHONDRIAL	coord: 146..290
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 29..109 e-value: 2.0E-7 score: 30.9
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 28..108 e-value: 5.52609E-9 score: 51.1608
IPR036065	BolA-like superfamily	SUPERFAMILY	82657	BolA-like	coord: 200..289

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC01G005360.1	CmUC01G005360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity