Clc11G14345 (gene) Watermelon (cordophanus) v2

Overview
NameClc11G14345
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionF-box protein At2g35280-like
LocationClcChr11: 25256787 .. 25258111 (-)
RNA-Seq ExpressionClc11G14345
SyntenyClc11G14345
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCCCTCAGCTGAAAACAAAATCACAGGCTTTGGACTCTCAAATTTCAAGGTACGTTTTACTTTTAAAATGTATTTTATTAAATACAGAGATTTTAGTTATTATTATTAACACTTATTTCAATTTGTGCAGTTTTAATTCTTAAAATTACCTTATTTTTTCAATTTATTTTAGTAAATAGAAGAAAAATTATCTTAAATGACAAAATTGTTGAAAATATTTATAAATATAGTAAAATTTCAGTCTATTTTGTGTCAATGTAATAGACTGGGATAAACAAACTGTAATTTATTGCGGTCTATTACCGACATTTTGCTATATTTGTAAATATTTGAAAGTTGTTTTTTCCTTTTTCAATATAAAAAAAAATTGTTTTTAACGCTAATGTAAAAATTTATATGAAAAAAAGAAAATGCTAGAGGTTACTAAATTGTATTTGTCTCCTACGCCGGTGAGGACTCTTTTACACCGTCAGGTTCGGCCGCCGGATTCCACCAACTCCGCGGCGGCTCGGTGGTGATGAATTAATTCTAATATAAAGCTAATTGAATATCTGTCTAAGAATAAAGTGATTATATTATTCTTTATTAATTCTTCTCTAAATTAATTATATGCAGAAGAACAAAAAGTATGCGCATGCCCGTCATTAAATCACTCCCAAATGATTTATTGATTGAAGTTCTTGCAAAAGTAGCAGCTTCTTCTTACATTGACTTAATCCAAGCCAAATTAGCCACCAAAGATTTTCTAGAAGCATCAAACGACGGATACGTATTCCGACATGTGTCTCTCAGAAACTTTCGGAAGCTTCTATGGAACAACAGTCCTGAATTTTGGTCATTCATGGAAAATTGCAACAACAATGAAAATCCAGAGAGTCTATATCGAAAGGGAATGTTGGAATTCTTCACCCATTGTAGAGAAGCTTCTGGGTTGGGTTATCTAAAACTATCTGCTCAAAAAGGCTACGTGGATGCTTGCTATGTATACGGTATCATTATGTACGCATCCAATGTAAAAGATGACGGACTCAAATATTTGAAAAATTGTGAGATGAAATTAGAGTATAAAATGAGTGAATGTCGTGGGAGAGTGAAGGAATTTGTTTGGTGTCTTTGGGTTAATAATAAGATTTGTTTTTCGGAAAATGGCGAGAGATATTGTAGTAATGTGAAAAATAATTGTATGATTAATGAGAAAAGAAAGGGATGGGATTGGAATGATGAAGATGATTATTATGGAGAACATGCATGTGAAGAGTGTAAATGGAATGGTGAGGTTTTCAGATTTTGTAATATGTTGAGAACAGGAGGCTACAGCTAA

mRNA sequence

ATGGCCCCTCAGCTGAAAACAAAATCACAGGCTTTGGACTCTCAAATTTCAAGAAGAACAAAAAGTATGCGCATGCCCGTCATTAAATCACTCCCAAATGATTTATTGATTGAAGTTCTTGCAAAAGTAGCAGCTTCTTCTTACATTGACTTAATCCAAGCCAAATTAGCCACCAAAGATTTTCTAGAAGCATCAAACGACGGATACGTATTCCGACATGTGTCTCTCAGAAACTTTCGGAAGCTTCTATGGAACAACAGTCCTGAATTTTGGTCATTCATGGAAAATTGCAACAACAATGAAAATCCAGAGAGTCTATATCGAAAGGGAATGTTGGAATTCTTCACCCATTGTAGAGAAGCTTCTGGGTTGGGTTATCTAAAACTATCTGCTCAAAAAGGCTACGTGGATGCTTGCTATGTATACGGTATCATTATGTACGCATCCAATGTAAAAGATGACGGACTCAAATATTTGAAAAATTGTGAGATGAAATTAGAGTATAAAATGAGTGAATGTCGTGGGAGAGTGAAGGAATTTGTTTGGTGTCTTTGGGTTAATAATAAGATTTGTTTTTCGGAAAATGGCGAGAGATATTGTAGTAATGTGAAAAATAATTGTATGATTAATGAGAAAAGAAAGGGATGGGATTGGAATGATGAAGATGATTATTATGGAGAACATGCATGTGAAGAGTGTAAATGGAATGGTGAGGTTTTCAGATTTTGTAATATGTTGAGAACAGGAGGCTACAGCTAA

Coding sequence (CDS)

ATGGCCCCTCAGCTGAAAACAAAATCACAGGCTTTGGACTCTCAAATTTCAAGAAGAACAAAAAGTATGCGCATGCCCGTCATTAAATCACTCCCAAATGATTTATTGATTGAAGTTCTTGCAAAAGTAGCAGCTTCTTCTTACATTGACTTAATCCAAGCCAAATTAGCCACCAAAGATTTTCTAGAAGCATCAAACGACGGATACGTATTCCGACATGTGTCTCTCAGAAACTTTCGGAAGCTTCTATGGAACAACAGTCCTGAATTTTGGTCATTCATGGAAAATTGCAACAACAATGAAAATCCAGAGAGTCTATATCGAAAGGGAATGTTGGAATTCTTCACCCATTGTAGAGAAGCTTCTGGGTTGGGTTATCTAAAACTATCTGCTCAAAAAGGCTACGTGGATGCTTGCTATGTATACGGTATCATTATGTACGCATCCAATGTAAAAGATGACGGACTCAAATATTTGAAAAATTGTGAGATGAAATTAGAGTATAAAATGAGTGAATGTCGTGGGAGAGTGAAGGAATTTGTTTGGTGTCTTTGGGTTAATAATAAGATTTGTTTTTCGGAAAATGGCGAGAGATATTGTAGTAATGTGAAAAATAATTGTATGATTAATGAGAAAAGAAAGGGATGGGATTGGAATGATGAAGATGATTATTATGGAGAACATGCATGTGAAGAGTGTAAATGGAATGGTGAGGTTTTCAGATTTTGTAATATGTTGAGAACAGGAGGCTACAGCTAA

Protein sequence

MAPQLKTKSQALDSQISRRTKSMRMPVIKSLPNDLLIEVLAKVAASSYIDLIQAKLATKDFLEASNDGYVFRHVSLRNFRKLLWNNSPEFWSFMENCNNNENPESLYRKGMLEFFTHCREASGLGYLKLSAQKGYVDACYVYGIIMYASNVKDDGLKYLKNCEMKLEYKMSECRGRVKEFVWCLWVNNKICFSENGERYCSNVKNNCMINEKRKGWDWNDEDDYYGEHACEECKWNGEVFRFCNMLRTGGYS
Homology
BLAST of Clc11G14345 vs. NCBI nr
Match: XP_038891683.1 (putative F-box protein At1g67623 [Benincasa hispida])

HSP 1 Score: 396.7 bits (1018), Expect = 1.5e-106
Identity = 182/229 (79.48%), Postives = 202/229 (88.21%), Query Frame = 0

Query: 27  VIKSLPNDLLIEVLAKVAASSYIDLIQAKLATKDFLEASNDGYVFRHVSLRNFRKLLWNN 86
           VIKSLPNDLLIEVLAKVAASSY DL+QAKLATKDFLE SN+GY+FRHVSL NF KLLWNN
Sbjct: 9   VIKSLPNDLLIEVLAKVAASSYTDLVQAKLATKDFLEVSNEGYIFRHVSLGNFSKLLWNN 68

Query: 87  SPEFWSFMENCNNNENPESLYRKGMLEFFTHCREASGLGYLKLSAQKGYVDACYVYGIIM 146
           SPEFWS +E CNNNENPESLYRKGMLEFFTHCREASGLGYLK SA+K Y+DACYVYG+++
Sbjct: 69  SPEFWSLIETCNNNENPESLYRKGMLEFFTHCREASGLGYLKRSAEKDYMDACYVYGVVL 128

Query: 147 YASNVKDDGLKYLKNCEMKLEYKMSECRGRVKEFVWCLWVNNKICFSE---NGERYCSNV 206
           YA+N+K++GL++L+NCE KL  KMSECR RVKEFVWCLW+ NK+  SE    G RYCSNV
Sbjct: 129 YATNLKEEGLQFLRNCEAKLGNKMSECRRRVKEFVWCLWIKNKVSLSEKEFGGRRYCSNV 188

Query: 207 -KNNCMINEKRKGWDWNDEDDYYGEHACEECKWNGEVFRFCNMLRTGGY 252
            KNNC+INEKR GWDW DEDD+YGEH CEECKW GEV RFCNMLRTG Y
Sbjct: 189 IKNNCLINEKRNGWDWKDEDDHYGEHTCEECKWKGEVSRFCNMLRTGAY 237

BLAST of Clc11G14345 vs. NCBI nr
Match: XP_022990389.1 (putative F-box protein At1g67623 [Cucurbita maxima])

HSP 1 Score: 372.1 bits (954), Expect = 3.8e-99
Identity = 183/259 (70.66%), Postives = 210/259 (81.08%), Query Frame = 0

Query: 1   MAPQLKTKSQALDSQISRRTKSMRM----PVIKSLPNDLLIEVLAKVAASSYIDLIQAKL 60
           MA  LK KSQAL SQISR+TK+ R+    P I+SLPNDLLIE+LAKVAASSY DL+QAKL
Sbjct: 1   MAGSLKRKSQALGSQISRKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKL 60

Query: 61  ATKDFLEASNDGYVFRHVSLRNFRKLLWNNSPEFWSFMENCNNNENPESLYRKGMLEFFT 120
           ATK FLEAS+  Y+F+H SL NF KLLWNNS EFWSFME CNNN NPE+LYRKGMLEFFT
Sbjct: 61  ATKKFLEASSHNYIFQHASLENFHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFT 120

Query: 121 HCREASGLGYLKLSAQKGYVDACYVYGIIMYASNVKDDGLKYLKNCEMKLEYKMSECRGR 180
           HCREASG+ YLK+SAQKGY +ACYVYGII+YA++++D+G+K+LK CE KL +K++ECR R
Sbjct: 121 HCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRR 180

Query: 181 VKEFVWCLWVNNKICFSE---NGERYCSNV-KNNCMINEKRKGWDWNDEDDYYGEHACEE 240
           VKEFV  LWV NKI   E   N  R C NV KN C  N +R GWDWNDED+YYGE+ CE 
Sbjct: 181 VKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEA 240

Query: 241 CKWNGEVFRFCNMLRTGGY 252
           CKWNGEV RFCNMLRTG Y
Sbjct: 241 CKWNGEVLRFCNMLRTGSY 259

BLAST of Clc11G14345 vs. NCBI nr
Match: KAG6601108.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 370.9 bits (951), Expect = 8.5e-99
Identity = 183/260 (70.38%), Postives = 213/260 (81.92%), Query Frame = 0

Query: 1   MAPQLKTKSQALDSQISRRTKSMRM----PVIKSLPNDLLIEVLAKVAASSYIDLIQAKL 60
           MA  LK KSQALDSQISR TK  R     P I+SLPNDLLIEVLAKVAA S+ +L+QAKL
Sbjct: 1   MAGSLKRKSQALDSQISRITKMARFSDFPPTIESLPNDLLIEVLAKVAAFSFTNLVQAKL 60

Query: 61  ATKDFLEASNDGYVFRHVSLRNFRKLLWNNSPEFWSFMENCNNNENPESLYRKGMLEFFT 120
           ATK+FLEAS+ GY+F+H SLRNF+KLLWNN+PEFWSFME CNNN NPE+LY+KGMLEFFT
Sbjct: 61  ATKEFLEASSHGYIFQHASLRNFQKLLWNNNPEFWSFMEKCNNNGNPETLYQKGMLEFFT 120

Query: 121 HCREASGLGYLKLSAQKGYVDACYVYGIIMYASNVKDDGLKYLKNCEMKLEYKMSECRGR 180
           HCREASG+ YLKLSAQKGY++ACYVYGII+YA+N++D+G+K+LK CE KL +K+++CR  
Sbjct: 121 HCREASGMTYLKLSAQKGYLEACYVYGIILYATNLEDEGVKFLKICEAKLGFKLAKCRRS 180

Query: 181 VKEFVWCLWVNNKICFSEN---GERYC-SNVKNNCMINEKRKGWDWNDEDDYYGEHACEE 240
           VKEFV CLWV NKI    N    +R C S VKN C  N +R GWD NDEDDYYGEH CE 
Sbjct: 181 VKEFVRCLWVKNKISLPVNDSGDQRGCESVVKNCCKKNVRRIGWDGNDEDDYYGEHTCEA 240

Query: 241 CKWNGEVFRFCNMLRTGGYS 253
           CKWNGEV RFCNMLRTG ++
Sbjct: 241 CKWNGEVSRFCNMLRTGSFN 260

BLAST of Clc11G14345 vs. NCBI nr
Match: XP_022990364.1 (putative F-box protein At1g67623 [Cucurbita maxima])

HSP 1 Score: 369.0 bits (946), Expect = 3.2e-98
Identity = 181/259 (69.88%), Postives = 209/259 (80.69%), Query Frame = 0

Query: 1   MAPQLKTKSQALDSQISRRTKSMRM----PVIKSLPNDLLIEVLAKVAASSYIDLIQAKL 60
           MA  LK KSQ+L S ISR+TK+ R+    P I+SLPNDLLIE+LAKVAASSY DL+QAKL
Sbjct: 1   MAGSLKRKSQSLGSHISRKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKL 60

Query: 61  ATKDFLEASNDGYVFRHVSLRNFRKLLWNNSPEFWSFMENCNNNENPESLYRKGMLEFFT 120
           ATK FLEAS+  Y+F+H SL NF KLLWNNS EFWSFME CNNN NPE+LYRKGMLEFFT
Sbjct: 61  ATKKFLEASSHNYIFQHASLENFHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFT 120

Query: 121 HCREASGLGYLKLSAQKGYVDACYVYGIIMYASNVKDDGLKYLKNCEMKLEYKMSECRGR 180
           HCREASG+ YLK+SAQKGY +ACYVYGII+YA++++D+G+K+LK CE KL +K++ECR R
Sbjct: 121 HCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRR 180

Query: 181 VKEFVWCLWVNNKICFSE---NGERYCSNV-KNNCMINEKRKGWDWNDEDDYYGEHACEE 240
           VKEFV  LWV NKI   E   N  R C NV KN C  N +R GWDWNDED+YYGE+ CE 
Sbjct: 181 VKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEA 240

Query: 241 CKWNGEVFRFCNMLRTGGY 252
           CKWNGEV RFCNMLRTG Y
Sbjct: 241 CKWNGEVLRFCNMLRTGSY 259

BLAST of Clc11G14345 vs. NCBI nr
Match: XP_023549492.1 (putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 369.0 bits (946), Expect = 3.2e-98
Identity = 181/255 (70.98%), Postives = 206/255 (80.78%), Query Frame = 0

Query: 5   LKTKSQALDSQISRRTKSMRM----PVIKSLPNDLLIEVLAKVAASSYIDLIQAKLATKD 64
           +K KSQAL SQISR+TK+ R+    P I+SLPNDLLIEVLAKVAASS+ DL+QAKLATK 
Sbjct: 5   VKRKSQALGSQISRKTKTARLSASPPTIESLPNDLLIEVLAKVAASSFTDLVQAKLATKK 64

Query: 65  FLEASNDGYVFRHVSLRNFRKLLWNNSPEFWSFMENCNNNENPESLYRKGMLEFFTHCRE 124
           FLEASN  Y+F+H SL NF+KLLWNNS EFWSFME CNNN NPE+LYRKGMLEFFTHCRE
Sbjct: 65  FLEASNHNYIFQHASLENFQKLLWNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCRE 124

Query: 125 ASGLGYLKLSAQKGYVDACYVYGIIMYASNVKDDGLKYLKNCEMKLEYKMSECRGRVKEF 184
           ASG+ YLKLSAQKGY DACYVYGII+Y ++++D+G+K+LK CE KL +K+ ECR RVKEF
Sbjct: 125 ASGMTYLKLSAQKGYPDACYVYGIILYTTSMEDEGVKFLKICEAKLGFKLVECRRRVKEF 184

Query: 185 VWCLWVNNKICF---SENGERYCSNV-KNNCMINEKRKGWDWNDEDDYYGEHACEECKWN 244
           V  LWV NKI       +  R C +V KN C  N +R GWDWNDEDDYYGEH CE CKWN
Sbjct: 185 VRYLWVKNKISVPKKDSSDRRGCESVIKNCCKKNVRRIGWDWNDEDDYYGEHTCEACKWN 244

Query: 245 GEVFRFCNMLRTGGY 252
           GEV RFCNMLRTG Y
Sbjct: 245 GEVLRFCNMLRTGSY 259

BLAST of Clc11G14345 vs. ExPASy Swiss-Prot
Match: Q9FXC7 (Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.7e-17
Identity = 63/226 (27.88%), Postives = 110/226 (48.67%), Query Frame = 0

Query: 18  RRTKSMRMPVIKSLPNDLLIEVLAKVAASSYIDLIQAKLATKDFLEASNDGYVFRHVSLR 77
           R++K+     + SLP DLL+E+ +   ASS   +   +L +K F    ++ YVF  +SL+
Sbjct: 14  RKSKTKASLCLDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLK 73

Query: 78  NFRKLLWNNSPEFWSFMENCNNNENPESLYRKGMLEFFTHCREASGLGYLKLSAQKGYVD 137
               L W+ +     F+E C  + NPE+L++KG + +F    +  GL YL  +A+KG  +
Sbjct: 74  EIEFLPWHENSA--KFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKE 133

Query: 138 ACYVYGIIM--YASNVKDDGLKYLKNCEMKL----EYKMSECRGRVKEFVWCLWVNNKIC 197
           A YVYG+I+       K  G + L +   +L      ++ E R ++++  +  W ++   
Sbjct: 134 AKYVYGVILICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQKIRYGFWWSDNTV 193

Query: 198 FSENGERYCS-----NVKNNCMINEKRKGWD-WNDEDDYYGEHACE 232
             +    Y S     + K   ++    +GW  + DE D     ACE
Sbjct: 194 VEQLKTAYVSEKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSACE 237

BLAST of Clc11G14345 vs. ExPASy Swiss-Prot
Match: Q1PEW8 (F-box protein At2g35280 OS=Arabidopsis thaliana OX=3702 GN=At2g35280 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 8.0e-07
Identity = 37/138 (26.81%), Postives = 70/138 (50.72%), Query Frame = 0

Query: 28  IKSLPNDLLIEVLAKVAASSYIDLIQAKLATKDFLEASNDGYVFRHVSLRNFRKLLWNNS 87
           +++LP DLL E++AK+   S  D     L+ K+   ++ND  V + ++L    K    + 
Sbjct: 11  LEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKPL-SC 70

Query: 88  PEFWSFMENCNNNENPESLYRKGMLEFFT--HCREASGLGYLKLSAQKGYVDACYVYGII 147
            +    M+ C  N NP++ Y KG++ +F   HC     L ++ ++A  G  +A Y+Y ++
Sbjct: 71  RKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHC--DVDLHHIGIAANGGQKEAIYMYAML 130

Query: 148 MYASNVKDDGLKYLKNCE 164
           +      ++G  Y+   E
Sbjct: 131 LLCRGRTEEGKTYMSQLE 145

BLAST of Clc11G14345 vs. ExPASy TrEMBL
Match: A0A6J1JRX4 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.9e-99
Identity = 183/259 (70.66%), Postives = 210/259 (81.08%), Query Frame = 0

Query: 1   MAPQLKTKSQALDSQISRRTKSMRM----PVIKSLPNDLLIEVLAKVAASSYIDLIQAKL 60
           MA  LK KSQAL SQISR+TK+ R+    P I+SLPNDLLIE+LAKVAASSY DL+QAKL
Sbjct: 1   MAGSLKRKSQALGSQISRKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKL 60

Query: 61  ATKDFLEASNDGYVFRHVSLRNFRKLLWNNSPEFWSFMENCNNNENPESLYRKGMLEFFT 120
           ATK FLEAS+  Y+F+H SL NF KLLWNNS EFWSFME CNNN NPE+LYRKGMLEFFT
Sbjct: 61  ATKKFLEASSHNYIFQHASLENFHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFT 120

Query: 121 HCREASGLGYLKLSAQKGYVDACYVYGIIMYASNVKDDGLKYLKNCEMKLEYKMSECRGR 180
           HCREASG+ YLK+SAQKGY +ACYVYGII+YA++++D+G+K+LK CE KL +K++ECR R
Sbjct: 121 HCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRR 180

Query: 181 VKEFVWCLWVNNKICFSE---NGERYCSNV-KNNCMINEKRKGWDWNDEDDYYGEHACEE 240
           VKEFV  LWV NKI   E   N  R C NV KN C  N +R GWDWNDED+YYGE+ CE 
Sbjct: 181 VKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEA 240

Query: 241 CKWNGEVFRFCNMLRTGGY 252
           CKWNGEV RFCNMLRTG Y
Sbjct: 241 CKWNGEVLRFCNMLRTGSY 259

BLAST of Clc11G14345 vs. ExPASy TrEMBL
Match: A0A6J1JRV1 (putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=4 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 1.6e-98
Identity = 181/259 (69.88%), Postives = 209/259 (80.69%), Query Frame = 0

Query: 1   MAPQLKTKSQALDSQISRRTKSMRM----PVIKSLPNDLLIEVLAKVAASSYIDLIQAKL 60
           MA  LK KSQ+L S ISR+TK+ R+    P I+SLPNDLLIE+LAKVAASSY DL+QAKL
Sbjct: 1   MAGSLKRKSQSLGSHISRKTKTARLSASPPAIESLPNDLLIEILAKVAASSYTDLVQAKL 60

Query: 61  ATKDFLEASNDGYVFRHVSLRNFRKLLWNNSPEFWSFMENCNNNENPESLYRKGMLEFFT 120
           ATK FLEAS+  Y+F+H SL NF KLLWNNS EFWSFME CNNN NPE+LYRKGMLEFFT
Sbjct: 61  ATKKFLEASSHNYIFQHASLENFHKLLWNNSTEFWSFMEKCNNNGNPETLYRKGMLEFFT 120

Query: 121 HCREASGLGYLKLSAQKGYVDACYVYGIIMYASNVKDDGLKYLKNCEMKLEYKMSECRGR 180
           HCREASG+ YLK+SAQKGY +ACYVYGII+YA++++D+G+K+LK CE KL +K++ECR R
Sbjct: 121 HCREASGMTYLKMSAQKGYSEACYVYGIILYATSMEDEGVKFLKICEEKLGFKLAECRRR 180

Query: 181 VKEFVWCLWVNNKICFSE---NGERYCSNV-KNNCMINEKRKGWDWNDEDDYYGEHACEE 240
           VKEFV  LWV NKI   E   N  R C NV KN C  N +R GWDWNDED+YYGE+ CE 
Sbjct: 181 VKEFVRHLWVKNKISVQEKYSNDRRGCENVIKNCCKKNVRRIGWDWNDEDNYYGENTCEA 240

Query: 241 CKWNGEVFRFCNMLRTGGY 252
           CKWNGEV RFCNMLRTG Y
Sbjct: 241 CKWNGEVLRFCNMLRTGSY 259

BLAST of Clc11G14345 vs. ExPASy TrEMBL
Match: A0A6J1GZQ6 (F-box protein At2g35280-like OS=Cucurbita moschata OX=3662 GN=LOC111458703 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.9e-97
Identity = 181/260 (69.62%), Postives = 206/260 (79.23%), Query Frame = 0

Query: 1   MAPQLKTKSQALDSQISRRTKSMRM----PVIKSLPNDLLIEVLAKVAASSYIDLIQAKL 60
           MA  LK KSQAL SQIS   K  R     P I+SLPNDLLIEVLAKVAASS+ DL+ AKL
Sbjct: 1   MAGSLKRKSQALRSQISGTIKMARFSASPPPIESLPNDLLIEVLAKVAASSFTDLVHAKL 60

Query: 61  ATKDFLEASNDGYVFRHVSLRNFRKLLWNNSPEFWSFMENCNNNENPESLYRKGMLEFFT 120
           ATK FLEAS+  Y+F+H SL NF KLLWNNS EFWSFME CNNN NPE+LYRKGMLEFFT
Sbjct: 61  ATKKFLEASSHNYIFQHASLENFHKLLWNNSKEFWSFMEKCNNNGNPETLYRKGMLEFFT 120

Query: 121 HCREASGLGYLKLSAQKGYVDACYVYGIIMYASNVKDDGLKYLKNCEMKLEYKMSECRGR 180
           HCREASG+ YLKLSAQKGY DACYVYGII+YA++++D+G+K+LK CE KL +K+++CRGR
Sbjct: 121 HCREASGMAYLKLSAQKGYPDACYVYGIILYATSMEDEGVKFLKICEAKLGFKLAKCRGR 180

Query: 181 VKEFVWCLWVNNKICFSEN---GERYCSNV-KNNCMINEKRKGWDWNDEDDYYGEHACEE 240
           VKEF++ LWV NKI   EN     R C +V KN C  N +R G DWNDEDDYYGEH CE 
Sbjct: 181 VKEFIYYLWVKNKIYVLENDSSNRRGCESVIKNCCRKNVRRIGCDWNDEDDYYGEHTCEA 240

Query: 241 CKWNGEVFRFCNMLRTGGYS 253
           CKWNGEV RFCNMLRTG Y+
Sbjct: 241 CKWNGEVLRFCNMLRTGSYN 260

BLAST of Clc11G14345 vs. ExPASy TrEMBL
Match: A0A6J1GYN4 (putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458702 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.2e-95
Identity = 168/230 (73.04%), Postives = 190/230 (82.61%), Query Frame = 0

Query: 26  PVIKSLPNDLLIEVLAKVAASSYIDLIQAKLATKDFLEASNDGYVFRHVSLRNFRKLLWN 85
           P I+SLPNDLLIEVLAKVAA SY DL+ AKLATK FLEAS+  Y+F+H SL NF KLLWN
Sbjct: 9   PPIESLPNDLLIEVLAKVAACSYTDLVHAKLATKKFLEASSHNYIFQHASLENFHKLLWN 68

Query: 86  NSPEFWSFMENCNNNENPESLYRKGMLEFFTHCREASGLGYLKLSAQKGYVDACYVYGII 145
           NS EFWSFME CNNN NPE+LYRKGMLEFFTHCREASG+ YLKLSAQKGY DACYVYGII
Sbjct: 69  NSKEFWSFMEKCNNNGNPETLYRKGMLEFFTHCREASGMAYLKLSAQKGYPDACYVYGII 128

Query: 146 MYASNVKDDGLKYLKNCEMKLEYKMSECRGRVKEFVWCLWVNNKICFSEN---GERYCSN 205
           +YA +++D+G+K+LK CE KL +K+++CRGRVKEF++CLWV NKI   EN     R C +
Sbjct: 129 LYAMSMEDEGVKFLKICEAKLGFKLAKCRGRVKEFIYCLWVKNKIYVLENDSSDRRGCES 188

Query: 206 V-KNNCMINEKRKGWDWNDEDDYYGEHACEECKWNGEVFRFCNMLRTGGY 252
           V KN C  N +R GWDWNDEDDYYGEH CE CKWNGEV RFCNMLRTG Y
Sbjct: 189 VIKNCCKKNVRRNGWDWNDEDDYYGEHTCEACKWNGEVLRFCNMLRTGSY 238

BLAST of Clc11G14345 vs. ExPASy TrEMBL
Match: A0A0A0LS96 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025065 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 4.0e-94
Identity = 179/256 (69.92%), Postives = 203/256 (79.30%), Query Frame = 0

Query: 4   QLKTKSQALDSQISRRTKSMRM-----PVIKSLPNDLLIEVLAKVAASSYIDLIQAKLAT 63
           Q K  S ALD+QISR T+  ++      VIKSLPNDLL EVLAKVA SSYIDLIQAKLAT
Sbjct: 5   QPKRDSVALDTQISRITEKNQIDVLSPTVIKSLPNDLLTEVLAKVATSSYIDLIQAKLAT 64

Query: 64  KDFLEASNDGYVFRHVSLRNFRKLLWNNSPEFWSFMENCNNNENPESLYRKGMLEFFTHC 123
           K FLEASND Y+F+HVSL NFR LLWNNSP+FWSFME CNN+ENPESLYRKGMLEFFTHC
Sbjct: 65  KHFLEASNDRYIFQHVSLGNFRNLLWNNSPKFWSFMETCNNSENPESLYRKGMLEFFTHC 124

Query: 124 REASGLGYLKLSAQKGYVDACYVYGIIMYASNVKDDGLKYLKNCEMKLEYKMSECRGRVK 183
           +EASG+ YLK SAQKGYVDACYV+G+I+YASN+KD+GL++LKN E+KL  KM ECR RVK
Sbjct: 125 KEASGMAYLKRSAQKGYVDACYVFGVILYASNLKDEGLEFLKNNEVKLGNKMIECRQRVK 184

Query: 184 EFVWCLWVNNKICFSENGERYCSNV-KN-NCMINEKRKGWDWNDEDDYYGEHACEECKWN 243
           EFV  +W+ NKI  SE    Y     KN NC +NEK   WD  DEDDYYG++ CEECKWN
Sbjct: 185 EFVSYIWIKNKISLSEGDSSYGRKCDKNINCRVNEKINVWDSKDEDDYYGKYTCEECKWN 244

Query: 244 GEVFRFCNMLRTGGYS 253
            EV RFC MLRTG +S
Sbjct: 245 NEVLRFCKMLRTGRFS 260

BLAST of Clc11G14345 vs. TAIR 10
Match: AT1G67623.1 (F-box family protein )

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-18
Identity = 63/226 (27.88%), Postives = 110/226 (48.67%), Query Frame = 0

Query: 18  RRTKSMRMPVIKSLPNDLLIEVLAKVAASSYIDLIQAKLATKDFLEASNDGYVFRHVSLR 77
           R++K+     + SLP DLL+E+ +   ASS   +   +L +K F    ++ YVF  +SL+
Sbjct: 14  RKSKTKASLCLDSLPEDLLVEISSCTGASSLSAVRNLRLVSKSFRRICDEKYVFYRLSLK 73

Query: 78  NFRKLLWNNSPEFWSFMENCNNNENPESLYRKGMLEFFTHCREASGLGYLKLSAQKGYVD 137
               L W+ +     F+E C  + NPE+L++KG + +F    +  GL YL  +A+KG  +
Sbjct: 74  EIEFLPWHENSA--KFIERCTESRNPEALFQKGFINYFRDKLQDRGLEYLAEAAEKGIKE 133

Query: 138 ACYVYGIIM--YASNVKDDGLKYLKNCEMKL----EYKMSECRGRVKEFVWCLWVNNKIC 197
           A YVYG+I+       K  G + L +   +L      ++ E R ++++  +  W ++   
Sbjct: 134 AKYVYGVILICLGGKTKQKGFEILSSVIKQLMSTTMNELVEFRYKIQKIRYGFWWSDNTV 193

Query: 198 FSENGERYCS-----NVKNNCMINEKRKGWD-WNDEDDYYGEHACE 232
             +    Y S     + K   ++    +GW  + DE D     ACE
Sbjct: 194 VEQLKTAYVSEKCKCDCKTRMLLLVMNRGWYLFGDETDLDFSSACE 237

BLAST of Clc11G14345 vs. TAIR 10
Match: AT1G74875.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G67623.1); Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 79.3 bits (194), Expect = 4.8e-15
Identity = 61/228 (26.75%), Postives = 105/228 (46.05%), Query Frame = 0

Query: 33  NDLLIEVLAKVAASSYIDLIQAKLATKDFLEASNDGYVFRHVSLRNFRKLLWNNSPEFWS 92
           N   I ++  V +SS  +    +L +K F   SND Y+ + +SL     L W N  +F +
Sbjct: 17  NMFQIHLVINVLSSSLSEFRNLQLVSKSFKRISNDRYILQRLSLNKIPLLPWRNRKKFHN 76

Query: 93  FMENCNNNENPESLYRKGMLEFF---THCREAS-GLGYLKLSAQKGYVDACYVYGIIM-- 152
           F + C  + N E++YRKG++++F   +H R+   GL ++  +A  G  +A YVYG+I+  
Sbjct: 77  FFKRCRKSGNLEAIYRKGLVDYFHRDSHERQRDRGLKHIAKTANNGNQEAQYVYGLILIC 136

Query: 153 YASNVKDDGLKYLKNCEMKLEY-----KMSECRGRVKEFVWCLWVNNKICFSENGERYCS 212
                K +G K L +    L       +M + R  ++   W  W    +   +      S
Sbjct: 137 LGGKTKQNGFKILSSLRKPLMLSNTIKEMEKHRTHIRNMWW--WGEPMMRHLQK-----S 196

Query: 213 NVKNNCMINEKRKGWD-------WNDEDDYYGEHACEECKWNGEVFRF 243
            V+ NC  + + + +        + ++DD     ACE C  + EV  F
Sbjct: 197 YVRENCNCDGRTEIFPNYCFRHRFGEDDDMLTSSACEICLCHHEVKLF 237

BLAST of Clc11G14345 vs. TAIR 10
Match: AT2G35280.1 (F-box family protein )

HSP 1 Score: 55.8 bits (133), Expect = 5.7e-08
Identity = 37/138 (26.81%), Postives = 70/138 (50.72%), Query Frame = 0

Query: 28  IKSLPNDLLIEVLAKVAASSYIDLIQAKLATKDFLEASNDGYVFRHVSLRNFRKLLWNNS 87
           +++LP DLL E++AK+   S  D     L+ K+   ++ND  V + ++L    K    + 
Sbjct: 11  LEALPQDLLREIVAKIGVKSAEDYHNCILSCKELGASANDERVLKTLNLALLVKKPL-SC 70

Query: 88  PEFWSFMENCNNNENPESLYRKGMLEFFT--HCREASGLGYLKLSAQKGYVDACYVYGII 147
            +    M+ C  N NP++ Y KG++ +F   HC     L ++ ++A  G  +A Y+Y ++
Sbjct: 71  RKHLLIMKKCLANNNPDAHYIKGIIWYFNLDHC--DVDLHHIGIAANGGQKEAIYMYAML 130

Query: 148 MYASNVKDDGLKYLKNCE 164
           +      ++G  Y+   E
Sbjct: 131 LLCRGRTEEGKTYMSQLE 145

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038891683.11.5e-10679.48putative F-box protein At1g67623 [Benincasa hispida][more]
XP_022990389.13.8e-9970.66putative F-box protein At1g67623 [Cucurbita maxima][more]
KAG6601108.18.5e-9970.38putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022990364.13.2e-9869.88putative F-box protein At1g67623 [Cucurbita maxima][more]
XP_023549492.13.2e-9870.98putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9FXC71.7e-1727.88Putative F-box protein At1g67623 OS=Arabidopsis thaliana OX=3702 GN=At1g67623 PE... [more]
Q1PEW88.0e-0726.81F-box protein At2g35280 OS=Arabidopsis thaliana OX=3702 GN=At2g35280 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1JRX41.9e-9970.66putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487258 PE=... [more]
A0A6J1JRV11.6e-9869.88putative F-box protein At1g67623 OS=Cucurbita maxima OX=3661 GN=LOC111487244 PE=... [more]
A0A6J1GZQ63.9e-9769.62F-box protein At2g35280-like OS=Cucurbita moschata OX=3662 GN=LOC111458703 PE=4 ... [more]
A0A6J1GYN41.2e-9573.04putative F-box protein At1g67623 OS=Cucurbita moschata OX=3662 GN=LOC111458702 P... [more]
A0A0A0LS964.0e-9469.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025065 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G67623.11.2e-1827.88F-box family protein [more]
AT1G74875.14.8e-1526.75FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT2G35280.15.7e-0826.81F-box family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33784:SF31F-BOX PROTEINcoord: 21..247
IPR040338Putative F-box protein At1g67623-likePANTHERPTHR33784OS05G0482100 PROTEINcoord: 21..247
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 18..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc11G14345.1Clc11G14345.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding