Clc11G11430 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc11G11430
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Response regulatory domain-containing protein
Location	ClcChr11: 18171207 .. 18172592 (+)
RNA-Seq Expression	Clc11G11430
Synteny	Clc11G11430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAGGTGGTGAGAAGAAGGTGAGTTGTTTGGTTGTAGATGATGAGGCAGTGATTAGATACATTCACATGTCTCTTCTTAAAAAGTTGAATGTTGAAGTTGAGGCAGCTGAAAATGGAAAGGCAGCAATTGATGCTTTCCAAGCTGGGGCTTCTTTTGATCTTGTTCTTATGGACTTGGAAATGCCTATTATTGATGGGGTTCAGGTACAATTCTCATTGCCCTTAAATCATTTCTATATTATTTCTTTCTTCAACTTAATCAGGTGTTATTTGATAACGATTTCGTCTTTGTTCATATTCTTTTTTATTTTTATTTATTTATTTTTTTTTTTTTTTTGTCAATTTTTAAAAACACATTTGAAATATTTTAACCTAAATTTCAAAAACAAAATTAAATTTTAAATTTTAGTTTCCAAATTTGTTTTAGTTTCTGAAAAATAGATTGAAAAATAGGTAATAAAGTAGGGAAAAACTATAGATAGAAATAGTCATTGTAAGGTTACTTTTTGAAATCCAAAAACCAAAAACAAAATAAATATCTAACTGAGATTTAGTTTTTTTGTTATTTTTCTTTTTTTTTTTTTTTTTAATAAACACATTAGATTCCATTATAATACTTAAGGCACTACTTGACAACATTTTTTTTATTTTTTGTTTTTGAAAATTAAGTCTTATAAACACTCATTCCACCTTTAGATTTCTTGCTTTGTTACCTACTTTTTATTTCAAAAAGCAAGAAAAAGTTTGAAAACTAAAAGAAAAATCTATAGTTTTTAATTTTTTTTTTTTTTTTTTTTGAATTTGACGAAAAATACAAATTTTTAAAAATCACAAATTAAAAACAAAATAATTACCAAACAAATCCTAAATAGTAGACAAGCGATTTACAAAGAGAGCCATTATGATTTAGAAAACAGGATTGTTGTTAAGGATGGACGAAATGTGTTTTTAATTAAAGAGAAGAAAAATAAGTAAATTTTTTAATCAAAAAGTTAGATTGGGATGAAGTTAATTTTATTTTCAAGAAATAGTTTAAATTTCTCAAACATTATTTTAAGAAGGAATAGTTTGAAATGAGTTTGAGTTCAAACTTCCAAAACACAGACCAAATAAAGTAGGAAACGAAAAAGAATAAAATTGGATGAAATTGAAAAGTAAAATTTGATGGAATTAATTTGAAAATTTGTAATAAATTAAATTGAAAAGGCAACAAAGGAGCTTCGAAGGATGGGGGTTAAAAGCAAGATAGTTGGAGTGACAGGACATGGCCCAACCTCTGAGAAGAAAGTTGGTTTTGTGGAGGCTGGTCTTGACCATTGCTTGATGAAGCCATTGACTATTCAAAGCCTTCATTCCCTTCTCCAACAACTCCAAAACTAA

mRNA sequence

ATGGAAGGAGGTGGTGAGAAGAAGGTGAGTTGTTTGGTTGTAGATGATGAGGCAGTGATTAGATACATTCACATGTCTCTTCTTAAAAAGTTGAATGTTGAAGTTGAGGCAGCTGAAAATGGAAAGGCAGCAATTGATGCTTTCCAAGCTGGGGCTTCTTTTGATCTTGTTCTTATGGACTTGGAAATGCCTATTATTGATGGGGTTCAGGCAACAAAGGAGCTTCGAAGGATGGGGGTTAAAAGCAAGATAGTTGGAGTGACAGGACATGGCCCAACCTCTGAGAAGAAAGTTGGTTTTGTGGAGGCTGGTCTTGACCATTGCTTGATGAAGCCATTGACTATTCAAAGCCTTCATTCCCTTCTCCAACAACTCCAAAACTAA

Coding sequence (CDS)

ATGGAAGGAGGTGGTGAGAAGAAGGTGAGTTGTTTGGTTGTAGATGATGAGGCAGTGATTAGATACATTCACATGTCTCTTCTTAAAAAGTTGAATGTTGAAGTTGAGGCAGCTGAAAATGGAAAGGCAGCAATTGATGCTTTCCAAGCTGGGGCTTCTTTTGATCTTGTTCTTATGGACTTGGAAATGCCTATTATTGATGGGGTTCAGGCAACAAAGGAGCTTCGAAGGATGGGGGTTAAAAGCAAGATAGTTGGAGTGACAGGACATGGCCCAACCTCTGAGAAGAAAGTTGGTTTTGTGGAGGCTGGTCTTGACCATTGCTTGATGAAGCCATTGACTATTCAAAGCCTTCATTCCCTTCTCCAACAACTCCAAAACTAA

Protein sequence

MEGGGEKKVSCLVVDDEAVIRYIHMSLLKKLNVEVEAAENGKAAIDAFQAGASFDLVLMDLEMPIIDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHSLLQQLQN

Homology

[Close]

BLAST of Clc11G11430 vs. NCBI nr
Match: XP_038889283.1 (two-component response regulator 24-like [Benincasa hispida])

HSP 1 Score: 206.1 bits (523), Expect = 1.8e-49
Identity = 103/123 (83.74%), Postives = 111/123 (90.24%), Query Frame = 0


Query: 1   MEGGGEKKVSCLVVDDEAVIRYIHMSLLKKLNVEVEAAENGKAAIDAFQAGASFDLVLMD 60
           MEGG EKKVS LVVDDEAV R IHMSLLKKLNVE EAAENGK A++AFQ GASFDLVLMD
Sbjct: 13  MEGGSEKKVSGLVVDDEAVNRQIHMSLLKKLNVEAEAAENGKEAVEAFQGGASFDLVLMD 72

Query: 61  LEMPIIDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHS 120
           LEMP +DG+QATKELRRMGVKSKI+GVTGHGPTSEKK  F+EAGLDHC MKPLTI+SL +
Sbjct: 73  LEMPAMDGLQATKELRRMGVKSKIIGVTGHGPTSEKKAAFMEAGLDHCFMKPLTIESLQT 132

Query: 121 LLQ 124
           LLQ
Sbjct: 133 LLQ 135

[Close]

BLAST of Clc11G11430 vs. NCBI nr
Match: XP_022144466.1 (two-component response regulator ARR22-like [Momordica charantia])

HSP 1 Score: 186.0 bits (471), Expect = 2.0e-43
Identity = 94/120 (78.33%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 6   EKKVSCLVVDDEAVIRYIHMSLLKKLNVE-VEAAENGKAAIDAFQAGASFDLVLMDLEMP 65
           +K +S LVVDDEAV+RYIHMSLL+KLNVE VEAAE+GKAA+DAFQ GASFDLVLMDLEMP
Sbjct: 17  KKIISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMP 76

Query: 66  IIDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHSLLQQ 125
           ++DG QATKELRRMGV+SKIVGVT +G  S +K  F+EAGLDHCLMKPLT+++LHSLLQQ
Sbjct: 77  LMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLLQQ 136

[Close]

BLAST of Clc11G11430 vs. NCBI nr
Match: KAE8009900.1 (hypothetical protein FH972_006306 [Carpinus fangiana])

HSP 1 Score: 139.8 bits (351), Expect = 1.6e-29
Identity = 73/125 (58.40%), Postives = 93/125 (74.40%), Query Frame = 0


Query: 1   MEGGGEKKVSCLVVDDEAVIRYIHMSLLKKLNVEVEAAENGKAAIDAFQAGASFDLVLMD 60
           ++G  E+K S LVVDD+A IR IH   L K  V+V+ A NGK A+D +++GA FDLVLMD
Sbjct: 12  VDGTDERKFSVLVVDDDATIRKIHSKFLSKFPVDVQVAVNGKEAVDLYRSGAFFDLVLMD 71

Query: 61  LEMPIIDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHS 120
           LEMPI++G +ATKELR +G+KS IVGVT     SEKK  F+EAGL+ C  KPLTI+ + S
Sbjct: 72  LEMPIMNGFEATKELRALGLKSLIVGVTSRSSDSEKK-AFMEAGLNDCYGKPLTIEMIKS 131

Query: 121 LLQQL 126
           LLQ+L
Sbjct: 132 LLQEL 135

[Close]

BLAST of Clc11G11430 vs. NCBI nr
Match: KAA8519414.1 (hypothetical protein F0562_013711 [Nyssa sinensis])

HSP 1 Score: 139.4 bits (350), Expect = 2.1e-29
Identity = 69/122 (56.56%), Postives = 90/122 (73.77%), Query Frame = 0


Query: 4   GGEKKVSCLVVDDEAVIRYIHMSLLKKLNVEVEAAENGKAAIDAFQAGASFDLVLMDLEM 63
           GG +K+  L+VDD+   R IH +LL K  VE + AENGK A+D +++GASFDLV+MD+EM
Sbjct: 16  GGNQKICVLIVDDDRATRRIHSALLNKFGVETQVAENGKEAVDLYRSGASFDLVIMDMEM 75

Query: 64  PIIDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHSLLQ 123
           P++DG  AT+ELRRMGV S IVGVT  G  SEK+  F+ AGLD C +KPL   ++ SLLQ
Sbjct: 76  PVMDGPTATQELRRMGVNSMIVGVTSRGQDSEKQ-AFMRAGLDDCHVKPLNSNTIASLLQ 135

Query: 124 QL 126
           Q+
Sbjct: 136 QV 136

[Close]

BLAST of Clc11G11430 vs. NCBI nr
Match: XP_030475410.1 (two-component response regulator 24-like, partial [Syzygium oleosum])

HSP 1 Score: 134.0 bits (336), Expect = 8.8e-28
Identity = 69/123 (56.10%), Postives = 94/123 (76.42%), Query Frame = 0


Query: 6   EKKVSCLVVDDEAVIRYIHMSLLKKLNVEVEA--AENGKAAIDAFQAGASFDLVLMDLEM 65
           +KK+S L+VDD++ IR IH  L+ ++ VEVE+  AENGK A+D F+AG SFDLVLMD EM
Sbjct: 7   QKKLSVLIVDDDSTIRTIHTILVNRVGVEVESKLAENGKVAVDLFRAGESFDLVLMDWEM 66

Query: 66  PIIDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHSLLQ 125
           P+++G++ATKELR MGV S IVGVT H   +EK   F+ AGLD C  KPL+I+ L ++LQ
Sbjct: 67  PVMNGIEATKELRNMGVSSMIVGVTSHSMDTEKGT-FMAAGLDDCYGKPLSIKILKNILQ 126

Query: 126 QLQ 127
           +++
Sbjct: 127 KMK 128

[Close]

BLAST of Clc11G11430 vs. ExPASy Swiss-Prot
Match: F4JZT3 (Two-component response regulator 24 OS=Arabidopsis thaliana OX=3702 GN=ARR24 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.3e-25
Identity = 59/120 (49.17%), Postives = 83/120 (69.17%), Query Frame = 0


Query: 6   EKKVSCLVVDDEAVIRYIHMSLLKKLNVEVEAAENGKAAIDAFQAGASFDLVLMDLEMPI 65
           E K++ LVVDD  V + IH  LL +L ++ +   NGK A+D + +G ++DL+LMD++MPI
Sbjct: 15  ESKLTALVVDDSFVNQTIHQKLLNRLGIKNDVVTNGKEAVDVYCSGGNYDLILMDMDMPI 74

Query: 66  IDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHSLLQQL 125
           ++G+QATK LR MG++SKI GVT      EKK  F+EAGL+    KPLTI  L S+L +L
Sbjct: 75  MNGIQATKRLREMGIESKIAGVTTRANEGEKK-EFMEAGLNDFQEKPLTISKLLSILHKL 133

[Close]

BLAST of Clc11G11430 vs. ExPASy Swiss-Prot
Match: Q9M8Y4 (Two-component response regulator ARR22 OS=Arabidopsis thaliana OX=3702 GN=ARR22 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.9e-20
Identity = 54/121 (44.63%), Postives = 77/121 (63.64%), Query Frame = 0


Query: 6   EKKVSCLVVDDEAVIRYIHMSLLKKLNVEVEAAENGKAAIDAFQAG-ASFDLVLMDLEMP 65
           +K ++ L+VDD+ + R +H  ++K +    + A+NG+ A+   + G ASFDL+LMD EMP
Sbjct: 19  KKLINVLIVDDDPLNRRLHEMIIKTIGGISQTAKNGEEAVILHRDGEASFDLILMDKEMP 78

Query: 66  IIDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHSLLQQ 125
             DGV  TK+LR M V S IVGVT      E++  F+EAGL+HCL KPLT   +  L+  
Sbjct: 79  ERDGVSTTKKLREMKVTSMIVGVTSVADQEEERKAFMEAGLNHCLEKPLTKAKIFPLISH 138

[Close]

BLAST of Clc11G11430 vs. ExPASy Swiss-Prot
Match: Q75KW7 (Two-component response regulator ORR41 OS=Oryza sativa subsp. japonica OX=39947 GN=RR41 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.9e-12
Identity = 45/123 (36.59%), Postives = 72/123 (58.54%), Query Frame = 0


Query: 7   KKVSCLVVDDEAVIRYIHMSLLKKL--NVEVEAAENGKAAIDAFQ-AGASFDLVLMDLEM 66
           K +  L+V+DE + R +  + LK       V+ AENG+ A+   + A A +DLVLMD +M
Sbjct: 4   KMIRVLLVEDEEINRVVARAALKAAGGGDVVDEAENGEVAVQRVRDAAAPYDLVLMDKQM 63

Query: 67  PIIDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHSLLQ 126
           P++DG +AT+ +R MGV + IV V+  G  ++    F+ AG D    KPL+ + L  +L 
Sbjct: 64  PVMDGHEATRRIRGMGVTTPIVAVSSDGLPADVD-AFITAGADDFTSKPLSKEKLGVILA 123

[Close]

BLAST of Clc11G11430 vs. ExPASy Swiss-Prot
Match: Q54SK5 (Hybrid signal transduction histidine kinase M OS=Dictyostelium discoideum OX=44689 GN=dhkM PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.1e-12
Identity = 46/123 (37.40%), Postives = 75/123 (60.98%), Query Frame = 0


Query: 9    VSCLVVDDEAVIRYIHMSLLKKLNVEVEAAENGKAAIDAF-QAGASFDLVLMDLEMPIID 68
            V+ L+V+D  V   I M++L+K N  VE ++NG+ A++   Q+ +SFDL+LMD+ MP++D
Sbjct: 2261 VNILLVEDNLVNAKIAMTVLRKHNFRVELSKNGQLAMERIKQSHSSFDLILMDIHMPVMD 2320

Query: 69   GVQATKELRRM----GVKS-KIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHSLL 126
            G+  +K  R+     G+K   I+ +T    T  K +  +EAG +  + KPL    L SLL
Sbjct: 2321 GITCSKLTRKFETEHGLKHLPIIALTADATTGHKNL-CLEAGCNEFMSKPLDYALLISLL 2380

[Close]

BLAST of Clc11G11430 vs. ExPASy Swiss-Prot
Match: O22267 (Histidine kinase CKI1 OS=Arabidopsis thaliana OX=3702 GN=CKI1 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 9.2e-12
Identity = 44/133 (33.08%), Postives = 77/133 (57.89%), Query Frame = 0


Query: 12   LVVDDEAVIRYIHMSLLKKLNV-EVEAAENGKAAIDAFQAGAS------------FDLVL 71
            LVVDD  + R +    LKK+ V EVE  ++GK A+     G +            FD + 
Sbjct: 989  LVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEALRLVTEGLTQREEQGSVDKLPFDYIF 1048

Query: 72   MDLEMPIIDGVQATKELRRM----GVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLT 128
            MD +MP +DG +AT+E+R++    GV++ I+ V+GH P SE+    ++AG+D  L K  +
Sbjct: 1049 MDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLDK--S 1108

[Close]

BLAST of Clc11G11430 vs. ExPASy TrEMBL
Match: A0A6J1CTH4 (two-component response regulator ARR22-like OS=Momordica charantia OX=3673 GN=LOC111014146 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 9.5e-44
Identity = 94/120 (78.33%), Postives = 109/120 (90.83%), Query Frame = 0


Query: 6   EKKVSCLVVDDEAVIRYIHMSLLKKLNVE-VEAAENGKAAIDAFQAGASFDLVLMDLEMP 65
           +K +S LVVDDEAV+RYIHMSLL+KLNVE VEAAE+GKAA+DAFQ GASFDLVLMDLEMP
Sbjct: 17  KKIISALVVDDEAVVRYIHMSLLRKLNVEQVEAAESGKAAVDAFQCGASFDLVLMDLEMP 76

Query: 66  IIDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHSLLQQ 125
           ++DG QATKELRRMGV+SKIVGVT +G  S +K  F+EAGLDHCLMKPLT+++LHSLLQQ
Sbjct: 77  LMDGAQATKELRRMGVESKIVGVTANGAISCEKAAFMEAGLDHCLMKPLTLENLHSLLQQ 136

[Close]

BLAST of Clc11G11430 vs. ExPASy TrEMBL
Match: A0A5N6QUA5 (Response regulatory domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_006306 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 7.8e-30
Identity = 73/125 (58.40%), Postives = 93/125 (74.40%), Query Frame = 0


Query: 1   MEGGGEKKVSCLVVDDEAVIRYIHMSLLKKLNVEVEAAENGKAAIDAFQAGASFDLVLMD 60
           ++G  E+K S LVVDD+A IR IH   L K  V+V+ A NGK A+D +++GA FDLVLMD
Sbjct: 12  VDGTDERKFSVLVVDDDATIRKIHSKFLSKFPVDVQVAVNGKEAVDLYRSGAFFDLVLMD 71

Query: 61  LEMPIIDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHS 120
           LEMPI++G +ATKELR +G+KS IVGVT     SEKK  F+EAGL+ C  KPLTI+ + S
Sbjct: 72  LEMPIMNGFEATKELRALGLKSLIVGVTSRSSDSEKK-AFMEAGLNDCYGKPLTIEMIKS 131

Query: 121 LLQQL 126
           LLQ+L
Sbjct: 132 LLQEL 135

[Close]

BLAST of Clc11G11430 vs. ExPASy TrEMBL
Match: A0A5J4ZNK8 (Response regulatory domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_013711 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 1.0e-29
Identity = 69/122 (56.56%), Postives = 90/122 (73.77%), Query Frame = 0


Query: 4   GGEKKVSCLVVDDEAVIRYIHMSLLKKLNVEVEAAENGKAAIDAFQAGASFDLVLMDLEM 63
           GG +K+  L+VDD+   R IH +LL K  VE + AENGK A+D +++GASFDLV+MD+EM
Sbjct: 16  GGNQKICVLIVDDDRATRRIHSALLNKFGVETQVAENGKEAVDLYRSGASFDLVIMDMEM 75

Query: 64  PIIDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHSLLQ 123
           P++DG  AT+ELRRMGV S IVGVT  G  SEK+  F+ AGLD C +KPL   ++ SLLQ
Sbjct: 76  PVMDGPTATQELRRMGVNSMIVGVTSRGQDSEKQ-AFMRAGLDDCHVKPLNSNTIASLLQ 135

Query: 124 QL 126
           Q+
Sbjct: 136 QV 136

[Close]

BLAST of Clc11G11430 vs. ExPASy TrEMBL
Match: A0A5C7IAF2 (Response regulatory domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_007439 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 5.6e-28
Identity = 68/120 (56.67%), Postives = 90/120 (75.00%), Query Frame = 0


Query: 6   EKKVSCLVVDDEAVIRYIHMSLLKKLNVEVEAAENGKAAIDAFQAGASFDLVLMDLEMPI 65
           +K+VS L+VDD+ VIR IH  +L+ L V+ E A NGK A+D F++GA+FD+V MDLEMPI
Sbjct: 10  KKQVSALIVDDDRVIRKIHSMILRSLKVKSEMAVNGKEAVDLFRSGANFDIVFMDLEMPI 69

Query: 66  IDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHSLLQQL 125
           ++G++ATKELR MGV  KIVGVT     +E K  F+EAGLD C +KPLT+  +  LL+QL
Sbjct: 70  MNGIEATKELRAMGVTCKIVGVTSR--DNEVKEAFLEAGLDFCHLKPLTVAKVTPLLEQL 127

[Close]

BLAST of Clc11G11430 vs. ExPASy TrEMBL
Match: A0A6P4A8B9 (two-component response regulator 24 OS=Ziziphus jujuba OX=326968 GN=LOC107417876 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 9.5e-28
Identity = 70/122 (57.38%), Postives = 89/122 (72.95%), Query Frame = 0


Query: 6   EKKVSCLVVDDEAVIRYIHMSLLKKLNV-EVEAAENGKAAIDAFQAGASFDLVLMDLEMP 65
           E+K+S LVVDD+ VI+ IH  +LKK  + E + AENGK AID  + GA FDL+LMD+EMP
Sbjct: 4   ERKISVLVVDDDPVIQKIHKMMLKKCKIFETQVAENGKQAIDLHRCGAIFDLILMDMEMP 63

Query: 66  IIDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHSLLQQ 125
           I++G+QATKELR MGV S IVGVT  G  SEK+  F+ AGL+ C  KPLTIQ + S L  
Sbjct: 64  IMNGIQATKELRAMGVDSMIVGVTSRGSDSEKQ-AFIGAGLNDCFAKPLTIQIISSFLHL 123

Query: 126 LQ 127
           ++
Sbjct: 124 IK 124

[Close]

BLAST of Clc11G11430 vs. TAIR 10
Match: AT5G26594.1 (response regulator 24 )

HSP 1 Score: 115.9 bits (289), Expect = 2.3e-26
Identity = 59/120 (49.17%), Postives = 83/120 (69.17%), Query Frame = 0


Query: 6   EKKVSCLVVDDEAVIRYIHMSLLKKLNVEVEAAENGKAAIDAFQAGASFDLVLMDLEMPI 65
           E K++ LVVDD  V + IH  LL +L ++ +   NGK A+D + +G ++DL+LMD++MPI
Sbjct: 15  ESKLTALVVDDSFVNQTIHQKLLNRLGIKNDVVTNGKEAVDVYCSGGNYDLILMDMDMPI 74

Query: 66  IDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHSLLQQL 125
           ++G+QATK LR MG++SKI GVT      EKK  F+EAGL+    KPLTI  L S+L +L
Sbjct: 75  MNGIQATKRLREMGIESKIAGVTTRANEGEKK-EFMEAGLNDFQEKPLTISKLLSILHKL 133

[Close]

BLAST of Clc11G11430 vs. TAIR 10
Match: AT3G04280.1 (response regulator 22 )

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-21
Identity = 54/121 (44.63%), Postives = 77/121 (63.64%), Query Frame = 0


Query: 6   EKKVSCLVVDDEAVIRYIHMSLLKKLNVEVEAAENGKAAIDAFQAG-ASFDLVLMDLEMP 65
           +K ++ L+VDD+ + R +H  ++K +    + A+NG+ A+   + G ASFDL+LMD EMP
Sbjct: 19  KKLINVLIVDDDPLNRRLHEMIIKTIGGISQTAKNGEEAVILHRDGEASFDLILMDKEMP 78

Query: 66  IIDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHSLLQQ 125
             DGV  TK+LR M V S IVGVT      E++  F+EAGL+HCL KPLT   +  L+  
Sbjct: 79  ERDGVSTTKKLREMKVTSMIVGVTSVADQEEERKAFMEAGLNHCLEKPLTKAKIFPLISH 138

[Close]

BLAST of Clc11G11430 vs. TAIR 10
Match: AT3G04280.2 (response regulator 22 )

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-21
Identity = 54/121 (44.63%), Postives = 77/121 (63.64%), Query Frame = 0


Query: 6   EKKVSCLVVDDEAVIRYIHMSLLKKLNVEVEAAENGKAAIDAFQAG-ASFDLVLMDLEMP 65
           +K ++ L+VDD+ + R +H  ++K +    + A+NG+ A+   + G ASFDL+LMD EMP
Sbjct: 19  KKLINVLIVDDDPLNRRLHEMIIKTIGGISQTAKNGEEAVILHRDGEASFDLILMDKEMP 78

Query: 66  IIDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHSLLQQ 125
             DGV  TK+LR M V S IVGVT      E++  F+EAGL+HCL KPLT   +  L+  
Sbjct: 79  ERDGVSTTKKLREMKVTSMIVGVTSVADQEEERKAFMEAGLNHCLEKPLTKAKIFPLISH 138

[Close]

BLAST of Clc11G11430 vs. TAIR 10
Match: AT3G04280.3 (response regulator 22 )

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-21
Identity = 54/121 (44.63%), Postives = 77/121 (63.64%), Query Frame = 0


Query: 6   EKKVSCLVVDDEAVIRYIHMSLLKKLNVEVEAAENGKAAIDAFQAG-ASFDLVLMDLEMP 65
           +K ++ L+VDD+ + R +H  ++K +    + A+NG+ A+   + G ASFDL+LMD EMP
Sbjct: 19  KKLINVLIVDDDPLNRRLHEMIIKTIGGISQTAKNGEEAVILHRDGEASFDLILMDKEMP 78

Query: 66  IIDGVQATKELRRMGVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLTIQSLHSLLQQ 125
             DGV  TK+LR M V S IVGVT      E++  F+EAGL+HCL KPLT   +  L+  
Sbjct: 79  ERDGVSTTKKLREMKVTSMIVGVTSVADQEEERKAFMEAGLNHCLEKPLTKAKIFPLISH 138

[Close]

BLAST of Clc11G11430 vs. TAIR 10
Match: AT2G47430.1 (Signal transduction histidine kinase )

HSP 1 Score: 71.2 bits (173), Expect = 6.6e-13
Identity = 44/133 (33.08%), Postives = 77/133 (57.89%), Query Frame = 0


Query: 12   LVVDDEAVIRYIHMSLLKKLNV-EVEAAENGKAAIDAFQAGAS------------FDLVL 71
            LVVDD  + R +    LKK+ V EVE  ++GK A+     G +            FD + 
Sbjct: 989  LVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEALRLVTEGLTQREEQGSVDKLPFDYIF 1048

Query: 72   MDLEMPIIDGVQATKELRRM----GVKSKIVGVTGHGPTSEKKVGFVEAGLDHCLMKPLT 128
            MD +MP +DG +AT+E+R++    GV++ I+ V+GH P SE+    ++AG+D  L K  +
Sbjct: 1049 MDCQMPEMDGYEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLDK--S 1108

The following BLAST results are available for this feature:

BLAST of Clc11G11430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889283.1	1.8e-49	83.74	two-component response regulator 24-like [Benincasa hispida]	[more]
XP_022144466.1	2.0e-43	78.33	two-component response regulator ARR22-like [Momordica charantia]	[more]
KAE8009900.1	1.6e-29	58.40	hypothetical protein FH972_006306 [Carpinus fangiana]	[more]
KAA8519414.1	2.1e-29	56.56	hypothetical protein F0562_013711 [Nyssa sinensis]	[more]
XP_030475410.1	8.8e-28	56.10	two-component response regulator 24-like, partial [Syzygium oleosum]	[more]

BLAST of Clc11G11430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JZT3	3.3e-25	49.17	Two-component response regulator 24 OS=Arabidopsis thaliana OX=3702 GN=ARR24 PE=...	[more]
Q9M8Y4	1.9e-20	44.63	Two-component response regulator ARR22 OS=Arabidopsis thaliana OX=3702 GN=ARR22 ...	[more]
Q75KW7	1.9e-12	36.59	Two-component response regulator ORR41 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q54SK5	4.1e-12	37.40	Hybrid signal transduction histidine kinase M OS=Dictyostelium discoideum OX=446...	[more]
O22267	9.2e-12	33.08	Histidine kinase CKI1 OS=Arabidopsis thaliana OX=3702 GN=CKI1 PE=1 SV=1	[more]

BLAST of Clc11G11430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTH4	9.5e-44	78.33	two-component response regulator ARR22-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A5N6QUA5	7.8e-30	58.40	Response regulatory domain-containing protein OS=Carpinus fangiana OX=176857 GN=...	[more]
A0A5J4ZNK8	1.0e-29	56.56	Response regulatory domain-containing protein OS=Nyssa sinensis OX=561372 GN=F05...	[more]
A0A5C7IAF2	5.6e-28	56.67	Response regulatory domain-containing protein OS=Acer yangbiense OX=1000413 GN=E...	[more]
A0A6P4A8B9	9.5e-28	57.38	two-component response regulator 24 OS=Ziziphus jujuba OX=326968 GN=LOC107417876...	[more]

BLAST of Clc11G11430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26594.1	2.3e-26	49.17	response regulator 24	[more]
AT3G04280.1	1.3e-21	44.63	response regulator 22	[more]
AT3G04280.2	1.3e-21	44.63	response regulator 22	[more]
AT3G04280.3	1.3e-21	44.63	response regulator 22	[more]
AT2G47430.1	6.6e-13	33.08	Signal transduction histidine kinase	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 9..122 e-value: 2.0E-24 score: 97.1
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 12..122 e-value: 1.5E-22 score: 79.8
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 10..126 score: 34.031647
None	No IPR available	GENE3D	3.40.50.2300		coord: 4..127 e-value: 3.0E-32 score: 113.3
None	No IPR available	PANTHER	PTHR43228	TWO-COMPONENT RESPONSE REGULATOR	coord: 6..127
None	No IPR available	PANTHER	PTHR43228:SF12	TWO-COMPONENT RESPONSE REGULATOR 24	coord: 6..127
None	No IPR available	CDD	cd17546	REC_hyHK_CKI1_RcsC-like	coord: 12..122 e-value: 1.45469E-35 score: 116.415
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 8..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc11G11430.1	Clc11G11430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity