Clc11G09080 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATTAGGCAGTTTGATATGTTCAATAATATTTTGATTGTATTTTGTTAATACAGACTTGCAGTTTGAATTATAATACGGAAACGAAAAAGCAAGAGGAATAAAGATCCTTCCTTTCTAACAAAAGGGTAGAGAAAGAGTGATGTCCCGGCAATGCCGAACAAGGAATAACTGCCGTTCCCCTTGTGGTGGGTTACCCGTAAAAACCACTTTTCTTTTCACTTTTCTGTGGTCCAATCCATTTGTCATTTTCAATTTTCAATAATTTTTCAATCCATTTTCAATCCATTTTCGTTGTTATAGAAGATTATAGATAGCGTTTGCTTTTTCCTAGTGTGATTCTCCAGAAGCCACCGCCATGGAGAATGGGGATTCAGGAAACGAATTCCAGGATTGGGAGGTTCTCCATGAGTATGATCAAACTTTCCCCCAATCTTACTCTTCCAATTTTCCCGATTCGAACTCCAGGTTTTTCCAGGAAATTGAAGGCGATTCAGCCTCTGGAAGCACAATCTGGTCGGATTACTTCTCTCTTCGTAATCACGAACCCACTGCAAAGACTGCCTTGAAGTCTACTGTAAGCAATCAGTGTTTGGTCGAATCAGGAAACCTCAACTCCGTTGATTCTGAATCGGAGAATCGGAATTCTTGCAAGAATATGAGTGAATTAGGGTCCGAGTTGGGAGACGACCTCTTGGATGAATATGAATTGAACCAATCTCATGCGAACGGTCTTCCAGATATTACGAAAAGCGTAACAGGTTTCGAAGAAATTTCAACCGACGCCGAGAATTTGGATAGACGGGAAAACGCTGATGGTAAATTGAAAGGCTCTCCTCTTGTTGCCAGAGATGAATCGTTTTCTAGGAAGGAAATGTATAACCCAACGCAATCCAAAGAATCTGGTGAAGAAAGTGAGAGCCAGGATGAGGTTTTGAACGATTCTCATTCTAATTCGAGTGGAAATGAGTCATTTGCCATGAAATCTGGAGAAGATGGAAAAGAGAGCGATCATATAGACAGTGTAAATGATATTTCGAGCAATGATTTGGGTGGGGGAGATGGAGATTCGAGTGAGAAAATAGATGTGGGAGTGGGAATGGAAATTGAGGAAGTGAAAGTAGAGGCAAAATCTAGTGAGTTAGAAGCACAGAGGAGGAGGGTTGTGTGGTGGAAGGTTCCTTTTCAGGTTTTGAGGTACTGCTTTTTAAGGGCTAGCCCTGCTTGGTCCTTTTCTGTGGCTGCTGCTCTCATGGGAATGTTGATATTAGGACGCAGATTGTACAAGATGAAGAAGAAAGCCAAGAGTCTTCACTTGAAGATTGCTGTGGTTGATAAGGTTAGTTATTGCTTCTTTTGGTTATCATATTTTTGTAATCCTTGAGTGAAGTTCTTTCGTTTAACAATAGCCTCTTTGGAAGTAAGTAACGTAGTTTTTTAACATGTTTGGAGATCTAAGTTCAACTCCGAGCAACCTAATCTGTTTTCTGGATGTTCTTGTGATTGAGATGGTGTGTTCTAAGCTTTTTTTATTGTTTCAAGAGGATAGCTTTCCTCTCAATGAAATTTCTTTCTTGGAAGAAGAATATTTTAGAACTTTGATTGACATTGAATGCACCTGTGATCATAAAAGCTCTAGTAATTGTGATTTTTGTGTTGAAATTGATCTGGAGTATCTTGATTATCTGGGTTACCTATAATGTTTGTCAACATAGACAAGTTCCACCATTGTAAATTGTTTGAGAAACGTTTTGGAACCTGGTAAAAACTAACCAGATTTTGTTGTTATTTCTGAAACTACCTTATTTTAATTATTTCTTGCTAAAGAACTTCTGTAGCCAGTGCCAAAAAACTTGACTCCTTTAGCAGTGCTGCTATTGATGCGTTTTTTCTGCTTTTGATCGAACATTTGGGGAAGTAACTGTAGATGATTAAATGCCTAAACTTAAGGGGTGTGGTCATAAACCCTTTTGGGATGTTAGAACTTCTTTTTTGTTTGTATATTCCTAGTGTCTGGACCAACTTATGCACATCTTGACTAATCTCACGGGACAACTCGTATGACCTTACAACATTTAGGTGTCAAGAAAATTCATAGAATATTAAATACTAGGTTAGTGACTATCATGGATTGAATTCATTCCTTGTAAGTCCTTTATTATAACCATGATCTCCTATGACGATTGAGACGACAGAACTTACAAATCTGAAAGCATAGTAGAACCTGTTATAACTTTTAAAGATTGGGATGCAGTTGGATTACTGAATGAAAGCTTGTTAGTGGGTCAATTAGTCTGGATTAGAAGCTTTCAATGCCTTGTGCGATATATAAGTTCCTCATCATGAGTGATTGAGTGAAAAAAATGAGGTTTTGTCCCATTTCCATATAATGATCCATTTAGTAATCTGCAAAAGTTGATTGAATGATGATAAAAACTCTTTTTTGTAGAGGGTATCGCAATTTGCAGATCAGGCTGCACGTTTGAACGAGGTCTTCTCGATGGTGAGACGGGTGCCTGTGGTGAGAGCTTCATTGACAGGTGCAGGTGCAAATTCTTGGCCTGCCATGAGTATGAGATGAAGTTTTCTTGTATTCATTGAAATTTCAACTATTTCCAGATGTTGGAGGACGATATGTAAATGTGAAGTTCATAGAAAATAGTTTTTTTTCTTTGTTTTTTCTTTTTATGCGATGAATATGATTTATGTGTGAATGAAATATTTAAGCCTCTTTGGATGTACTTTTATTTCAACAATTAGGTTCAAATATGTAGATTTATGGATGATAAGAATCTATTTGAATTGTTTTTTTTATTTATTTGATTATGTGACGTTTAAGCTGAGTGAGTCAAGTTGACTTGGAAACTGATTTACGGGATTGAGCCAGCCCAGTGAACCCTTACTTGAAGCCCTTGTTTGCTGTTGTTTTCTTCAGGGAGTTTGGTGGATTGAGGTTCTCGATTTTGTTTGTTTTTCGATTTTAGTTATTTATTGATTAAAGAACGGAAGAAGAATTAGAAGATATAAAAGGAATAAGTGGATTTTTCAA CATTAGGCAGTTTGATATGTTCAATAATATTTTGATTGTATTTTGTTAATACAGACTTGCAGTTTGAATTATAATACGGAAACGAAAAAGCAAGAGGAATAAAGATCCTTCCTTTCTAACAAAAGGGTAGAGAAAGAGTGATGTCCCGGCAATGCCGAACAAGGAATAACTGCCGTTCCCCTTGTGGTGGGTTACCCGTAAAAACCACTTTTCTTTTCACTTTTCTGTGGTCCAATCCATTTGTCATTTTCAATTTTCAATAATTTTTCAATCCATTTTCAATCCATTTTCGTTGTTATAGAAGATTATAGATAGCGTTTGCTTTTTCCTAGTGTGATTCTCCAGAAGCCACCGCCATGGAGAATGGGGATTCAGGAAACGAATTCCAGGATTGGGAGGTTCTCCATGAGTATGATCAAACTTTCCCCCAATCTTACTCTTCCAATTTTCCCGATTCGAACTCCAGGTTTTTCCAGGAAATTGAAGGCGATTCAGCCTCTGGAAGCACAATCTGGTCGGATTACTTCTCTCTTCGTAATCACGAACCCACTGCAAAGACTGCCTTGAAGTCTACTGTAAGCAATCAGTGTTTGGTCGAATCAGGAAACCTCAACTCCGTTGATTCTGAATCGGAGAATCGGAATTCTTGCAAGAATATGAGTGAATTAGGGTCCGAGTTGGGAGACGACCTCTTGGATGAATATGAATTGAACCAATCTCATGCGAACGGTCTTCCAGATATTACGAAAAGCGTAACAGGTTTCGAAGAAATTTCAACCGACGCCGAGAATTTGGATAGACGGGAAAACGCTGATGGTAAATTGAAAGGCTCTCCTCTTGTTGCCAGAGATGAATCGTTTTCTAGGAAGGAAATGTATAACCCAACGCAATCCAAAGAATCTGGTGAAGAAAGTGAGAGCCAGGATGAGGTTTTGAACGATTCTCATTCTAATTCGAGTGGAAATGAGTCATTTGCCATGAAATCTGGAGAAGATGGAAAAGAGAGCGATCATATAGACAGTGTAAATGATATTTCGAGCAATGATTTGGGTGGGGGAGATGGAGATTCGAGTGAGAAAATAGATGTGGGAGTGGGAATGGAAATTGAGGAAGTGAAAGTAGAGGCAAAATCTAGTGAGTTAGAAGCACAGAGGAGGAGGGTTGTGTGGTGGAAGGTTCCTTTTCAGGTTTTGAGGTACTGCTTTTTAAGGGCTAGCCCTGCTTGGTCCTTTTCTGTGGCTGCTGCTCTCATGGGAATGTTGATATTAGGACGCAGATTGTACAAGATGAAGAAGAAAGCCAAGAGTCTTCACTTGAAGATTGCTGTGGTTGATAAGAGGGTATCGCAATTTGCAGATCAGGCTGCACGTTTGAACGAGGTCTTCTCGATGGTGAGACGGGTGCCTGTGGTGAGAGCTTCATTGACAGGTGCAGGTGCAAATTCTTGGCCTGCCATGAGTATGAGATGAAGTTTTCTTGTATTCATTGAAATTTCAACTATTTCCAGATGTTGGAGGACGATATGTAAATGTGAAGTTCATAGAAAATAGTTTTTTTTCTTTGTTTTTTCTTTTTATGCGATGAATATGATTTATGTGTGAATGAAATATTTAAGCCTCTTTGGATGTACTTTTATTTCAACAATTAGGTTCAAATATGTAGATTTATGGATGATAAGAATCTATTTGAATTGTTTTTTTTATTTATTTGATTATGTGACGTTTAAGCTGAGTGAGTCAAGTTGACTTGGAAACTGATTTACGGGATTGAGCCAGCCCAGTGAACCCTTACTTGAAGCCCTTGTTTGCTGTTGTTTTCTTCAGGGAGTTTGGTGGATTGAGGTTCTCGATTTTGTTTGTTTTTCGATTTTAGTTATTTATTGATTAAAGAACGGAAGAAGAATTAGAAGATATAAAAGGAATAAGTGGATTTTTCAA ATGGAGAATGGGGATTCAGGAAACGAATTCCAGGATTGGGAGGTTCTCCATGAGTATGATCAAACTTTCCCCCAATCTTACTCTTCCAATTTTCCCGATTCGAACTCCAGGTTTTTCCAGGAAATTGAAGGCGATTCAGCCTCTGGAAGCACAATCTGGTCGGATTACTTCTCTCTTCGTAATCACGAACCCACTGCAAAGACTGCCTTGAAGTCTACTGTAAGCAATCAGTGTTTGGTCGAATCAGGAAACCTCAACTCCGTTGATTCTGAATCGGAGAATCGGAATTCTTGCAAGAATATGAGTGAATTAGGGTCCGAGTTGGGAGACGACCTCTTGGATGAATATGAATTGAACCAATCTCATGCGAACGGTCTTCCAGATATTACGAAAAGCGTAACAGGTTTCGAAGAAATTTCAACCGACGCCGAGAATTTGGATAGACGGGAAAACGCTGATGGTAAATTGAAAGGCTCTCCTCTTGTTGCCAGAGATGAATCGTTTTCTAGGAAGGAAATGTATAACCCAACGCAATCCAAAGAATCTGGTGAAGAAAGTGAGAGCCAGGATGAGGTTTTGAACGATTCTCATTCTAATTCGAGTGGAAATGAGTCATTTGCCATGAAATCTGGAGAAGATGGAAAAGAGAGCGATCATATAGACAGTGTAAATGATATTTCGAGCAATGATTTGGGTGGGGGAGATGGAGATTCGAGTGAGAAAATAGATGTGGGAGTGGGAATGGAAATTGAGGAAGTGAAAGTAGAGGCAAAATCTAGTGAGTTAGAAGCACAGAGGAGGAGGGTTGTGTGGTGGAAGGTTCCTTTTCAGGTTTTGAGGTACTGCTTTTTAAGGGCTAGCCCTGCTTGGTCCTTTTCTGTGGCTGCTGCTCTCATGGGAATGTTGATATTAGGACGCAGATTGTACAAGATGAAGAAGAAAGCCAAGAGTCTTCACTTGAAGATTGCTGTGGTTGATAAGAGGGTATCGCAATTTGCAGATCAGGCTGCACGTTTGAACGAGGTCTTCTCGATGGTGAGACGGGTGCCTGTGGTGAGAGCTTCATTGACAGGTGCAGGTGCAAATTCTTGGCCTGCCATGAGTATGAGATGA MENGDSGNEFQDWEVLHEYDQTFPQSYSSNFPDSNSRFFQEIEGDSASGSTIWSDYFSLRNHEPTAKTALKSTVSNQCLVESGNLNSVDSESENRNSCKNMSELGSELGDDLLDEYELNQSHANGLPDITKSVTGFEEISTDAENLDRRENADGKLKGSPLVARDESFSRKEMYNPTQSKESGEESESQDEVLNDSHSNSSGNESFAMKSGEDGKESDHIDSVNDISSNDLGGGDGDSSEKIDVGVGMEIEEVKVEAKSSELEAQRRRVVWWKVPFQVLRYCFLRASPAWSFSVAAALMGMLILGRRLYKMKKKAKSLHLKIAVVDKRVSQFADQAARLNEVFSMVRRVPVVRASLTGAGANSWPAMSMR Homology
BLAST of Clc11G09080 vs. NCBI nr
Match: XP_038886526.1 (uncharacterized protein LOC120076701 isoform X1 [Benincasa hispida]) HSP 1 Score: 547.0 bits (1408), Expect = 1.3e-151 Identity = 303/376 (80.59%), Postives = 326/376 (86.70%), Query Frame = 0
BLAST of Clc11G09080 vs. NCBI nr
Match: XP_038886527.1 (uncharacterized protein LOC120076701 isoform X2 [Benincasa hispida]) HSP 1 Score: 542.0 bits (1395), Expect = 4.1e-150 Identity = 303/376 (80.59%), Postives = 325/376 (86.44%), Query Frame = 0
BLAST of Clc11G09080 vs. NCBI nr
Match: KAA0037045.1 (uncharacterized protein E6C27_scaffold86G001400 [Cucumis melo var. makuwa] >TYK06606.1 uncharacterized protein E5676_scaffold453G00740 [Cucumis melo var. makuwa]) HSP 1 Score: 520.0 bits (1338), Expect = 1.7e-143 Identity = 284/367 (77.38%), Postives = 318/367 (86.65%), Query Frame = 0
BLAST of Clc11G09080 vs. NCBI nr
Match: XP_008441179.1 (PREDICTED: uncharacterized protein LOC103485392 isoform X1 [Cucumis melo]) HSP 1 Score: 520.0 bits (1338), Expect = 1.7e-143 Identity = 284/367 (77.38%), Postives = 318/367 (86.65%), Query Frame = 0
BLAST of Clc11G09080 vs. NCBI nr
Match: XP_008441180.1 (PREDICTED: uncharacterized protein LOC103485392 isoform X2 [Cucumis melo]) HSP 1 Score: 509.6 bits (1311), Expect = 2.3e-140 Identity = 281/367 (76.57%), Postives = 315/367 (85.83%), Query Frame = 0
BLAST of Clc11G09080 vs. ExPASy TrEMBL
Match: A0A5A7T6D7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G00740 PE=4 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 8.1e-144 Identity = 284/367 (77.38%), Postives = 318/367 (86.65%), Query Frame = 0
BLAST of Clc11G09080 vs. ExPASy TrEMBL
Match: A0A1S3B3K7 (uncharacterized protein LOC103485392 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485392 PE=4 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 8.1e-144 Identity = 284/367 (77.38%), Postives = 318/367 (86.65%), Query Frame = 0
BLAST of Clc11G09080 vs. ExPASy TrEMBL
Match: A0A1S3B2D6 (uncharacterized protein LOC103485392 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485392 PE=4 SV=1) HSP 1 Score: 509.6 bits (1311), Expect = 1.1e-140 Identity = 281/367 (76.57%), Postives = 315/367 (85.83%), Query Frame = 0
BLAST of Clc11G09080 vs. ExPASy TrEMBL
Match: A0A0A0LQL9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G401370 PE=4 SV=1) HSP 1 Score: 479.6 bits (1233), Expect = 1.2e-131 Identity = 269/367 (73.30%), Postives = 299/367 (81.47%), Query Frame = 0
BLAST of Clc11G09080 vs. ExPASy TrEMBL
Match: A0A6J1GRS2 (uncharacterized protein LOC111456864 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456864 PE=4 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 3.1e-127 Identity = 263/372 (70.70%), Postives = 299/372 (80.38%), Query Frame = 0
BLAST of Clc11G09080 vs. TAIR 10
Match: AT4G10080.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13530.1); Has 120 Blast hits to 114 proteins in 21 species: Archae - 2; Bacteria - 4; Metazoa - 0; Fungi - 12; Plants - 100; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 124.4 bits (311), Expect = 1.9e-28 Identity = 110/305 (36.07%), Postives = 160/305 (52.46%), Query Frame = 0
BLAST of Clc11G09080 vs. TAIR 10
Match: AT4G13530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10080.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 96.7 bits (239), Expect = 4.2e-20 Identity = 89/281 (31.67%), Postives = 134/281 (47.69%), Query Frame = 0
BLAST of Clc11G09080 vs. TAIR 10
Match: AT4G13530.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10080.1); Has 70 Blast hits to 69 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 94.0 bits (232), Expect = 2.8e-19 Identity = 88/281 (31.32%), Postives = 132/281 (46.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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