Clc11G08050 (gene) Watermelon (cordophanus) v2

Overview
NameClc11G08050
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
LocationClcChr11: 7835673 .. 7838094 (-)
RNA-Seq ExpressionClc11G08050
SyntenyClc11G08050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGTTGAATCCATGGGCAGGCAAGAGACAACCTGGCGGGGCCCACACCTTAATTGTTCTATACCTTGCAGGAGAAGGGTTAAAGTACCCATTCGGGGATTAAGTGGAATATTAGCCCGGAAATGCGACTCTAACAGCTAGGTTTCGAGAGGGCTATATCGATCTCGGAAACAGGCCTCAATGGGAAAATAAAACGGAGCACCTAACAACGTATCTTCACAGACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGTGACGGAGGGATCGTACCATTCGAGCCTTTTTTTTTCATGCTTTTCCCGGAGGTCTGGAGAAAGTATAAAGTAGGAGGGTTTTAAATGCGAGATCTAAAAACATATCTCTCCGTGGCACCGGTAGTAAGTACTATATGGTTCAGGGCGTTAGCGGGTCTATTAATCGAGATCAATCGTTTATTCCCGGATGCGTTGGTATTCCCATTTTTTTCATTCTAGTTATTGATTTGCGCGTCGTTCCAACAACCGGCGGGGAGCACCTCAGTATACGATCGTGCGCAGTAACTGAGAGTCCTATTACACCTAAGGCCAACTTCAATTCACCAAACCAAGGTTCATCTCGTGTAGTGATTGTGGACTCGTGAAAGGGTCACCACTACTTCGGATCTCCCCCCTAATCTTAGATAGGTCGTCTGAGGGTTCGCCGCGGTTCATTGCTGTGCTTACACACTAGGCTACCCTTCTCCGAAAGCTCCGCGGGACCACCTACCACTAGTCTTCGGCCGGAGGGGTTTATTGCACAAAAACGCCGGGACGCAGGCCCCCGAAGAGGGAAGCCCAACGAATGTCAGATGCAAAGCCCCGCACCTCATTAAGATCATATTGGCATACTCCCCAAAAAAAAAAAAGAGCAGACCCCATTGAAGACGAGAGTGAGGTACAACAAGGCCATTTCTGTCCACCGCCCTTCTCACAGAGCCGGCTCATGGCTTTCGAAGTAAAAATCACCCTTAAAGTACACCCACACCCCTATACCTCTTTAAAAGGCTCTGATAGTCGAATTTTTTGTTCTTTCTTATCTTAAAGGGATCGTATTGACCCTCTTCAGAGCCTATGGGAGAAGACCCACTACTCCCAAGTGGGGTTCATCGGCACTCCCACTCTGGGACTAGGGAGATCCCCGTCACATCCTGTTTCCGTGCCTCTCCTCCTTCCCCCCCCTAAACAGATTAGAAAAGAAAAAAGCATATCTTCCAATTCCTTCCCGATACCTCCCAAGGAAAATTCCGAATTGGATCCAAAATTGACGGGTTAAAGTTGTGCTCAAGCTCGATAGGTAAGAAATTAAAACACTCCCTTCTTTCCTTTTTTGTTATTTAAGCGAAAATGATGAAAACCAGATCGAACTCTAAAGTCAAGCCTTTCATTCCTCTTATTCAAATGCTTTCCCTTGGCTTCGGTGCTAGCTAGGACTGGTAGCATGGTCTTCTCTTAGGCTTTCTCTTCCATCAAATTGAGTATGATTGTATGTGTGATAGCATCTACTATACCAGGAATATCAATGAACCCGATTATTGAAATTGCTCAGGATACCCTTTTTTAGAGTCTAAGAGTTTTATAAAACGTTCTTGATGGAAAAAAATGTGAATGAAAGATCCCACTGAATTGAATTGGGTCCATGAATCTAAGAAATAGTGAGAATTCTTGATCTCTCTCAATTCGAAAATCCAGGATTTGAATTGATGTCCTTTCATTGAGTCCGTTATTCCCAATAATACGGCTCGGTAACAGATCGCTTCTTCCAAAGCACGCCCTGTTCGTTCCGCTCGCAACAATCCAATGAGTTCTCCAGGTGAAAAAACATTCGACATTCCATCCTCTGAAACCAACACTTTTGATGTTATTTGACGTACAATAATTTCGACAAGTCAGAATTGCCTCAACCAAAATTGATGGAATTGGACCTAAAAAAGCCATTCAGGTTCGTTATCGATTAGGTATCAGTGGGAACATAAAGATCAAAGAGTTAACTAAGTATCAGATCGACCAAATTGAACAAATCTCTCTCCTGTGAAACTCCTCCTTGTTCTATGATTGATCTGACCATTTTCTTTAGGCGGAAGCTGAAAAGAGATTTGAACAGCAGTCTGAAAAGACTAATGCTGCGCAAAAGAATATGTTTCTAAAAAAGAATAAGCACAAAGTGAGTGCAGAAGGACCTGAAAAACATACCGTTCCGACTTCCAAAGGCGATCCTAAGGGAAGAAGAATGAAAGGGATAAGGCTGCAAGAAGAACCTAGAGAGGAAGCTCCACCGAAAGAAGAAGAGGAAATAAGACTCGAGTTTCTGGAAATCTTTCAAGAGGGAGTTCCATAG

mRNA sequence

ATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGTTGAATCCATGGGCAGGCAAGAGACAACCTGGCGGGGCCCACACCTTAATTGTTCTATACCTTGCAGGAGAAGGGTTAAAGCCTCAATGGGAAAATAAAACGGAGCACCTAACAACGTATCTTCACAGACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGTGACGGAGGGATCGTACCATTCGAGCCTTTTTTTTTCATGCTTTTCCCGGAGGGCGTTAGCGGGTCTATTAATCGAGATCAATCGTTTATTCCCGGATGCGTTGGTATTCCCATTTTTTTCATTCTAGTTATTGATTTGCGCGTCGTTCCAACAACCGGCGGGGAGCACCTCAGTATACGATCGTGCGCAGTAACTGAGAGTCCTATTACACCTAAGGCCAACTTCAATTCACCAAACCAAGGCTACCCTTCTCCGAAAGCTCCGCGGGACCACCTACCACTAGTCTTCGGCCGGAGGGGTTTATTGCACAAAAACGCCGGGACGCAGGCCCCCGAAGAGGGAAGCCCAACGAATACGAGAGTGAGGTACAACAAGGCCATTTCTGTCCACCGCCCTTCTCACAGAGCCGGCTCATGGCTTTCGAAGGATCGTATTGACCCTCTTCAGAGCCTATGGGAGAAGACCCACTACTCCCAAGTGGGGTTCATCGGCACTCCCACTCTGGGACTAGGGAGATCCCCGTCACATCCTGTTTCCGTGCCTCTCCTCCTTCCCCCCCCTAAACAGATTAGAAAAGAAAAAAGCATATCTTCCAATTCCTTCCCGATACCTCCCAAGGAAAATTCCGAATTGGATCCAAAATTGACGGATCGCTTCTTCCAAAGCACGCCCTGTTCGTTCCGCTCGCAACAATCCAATGAGTTCTCCAGAATTGCCTCAACCAAAATTGATGGAATTGGACCTAAAAAAGCCATTCAGGCGGAAGCTGAAAAGAGATTTGAACAGCAGTCTGAAAAGACTAATGCTGCGCAAAAGAATATGTTTCTAAAAAAGAATAAGCACAAAGTGAGTGCAGAAGGACCTGAAAAACATACCGTTCCGACTTCCAAAGGCGATCCTAAGGGAAGAAGAATGAAAGGGATAAGGCTGCAAGAAGAACCTAGAGAGGAAGCTCCACCGAAAGAAGAAGAGGAAATAAGACTCGAGTTTCTGGAAATCTTTCAAGAGGGAGTTCCATAG

Coding sequence (CDS)

ATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTCAAACTGCTGTTGAATCCATGGGCAGGCAAGAGACAACCTGGCGGGGCCCACACCTTAATTGTTCTATACCTTGCAGGAGAAGGGTTAAAGCCTCAATGGGAAAATAAAACGGAGCACCTAACAACGTATCTTCACAGACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGTGACGGAGGGATCGTACCATTCGAGCCTTTTTTTTTCATGCTTTTCCCGGAGGGCGTTAGCGGGTCTATTAATCGAGATCAATCGTTTATTCCCGGATGCGTTGGTATTCCCATTTTTTTCATTCTAGTTATTGATTTGCGCGTCGTTCCAACAACCGGCGGGGAGCACCTCAGTATACGATCGTGCGCAGTAACTGAGAGTCCTATTACACCTAAGGCCAACTTCAATTCACCAAACCAAGGCTACCCTTCTCCGAAAGCTCCGCGGGACCACCTACCACTAGTCTTCGGCCGGAGGGGTTTATTGCACAAAAACGCCGGGACGCAGGCCCCCGAAGAGGGAAGCCCAACGAATACGAGAGTGAGGTACAACAAGGCCATTTCTGTCCACCGCCCTTCTCACAGAGCCGGCTCATGGCTTTCGAAGGATCGTATTGACCCTCTTCAGAGCCTATGGGAGAAGACCCACTACTCCCAAGTGGGGTTCATCGGCACTCCCACTCTGGGACTAGGGAGATCCCCGTCACATCCTGTTTCCGTGCCTCTCCTCCTTCCCCCCCCTAAACAGATTAGAAAAGAAAAAAGCATATCTTCCAATTCCTTCCCGATACCTCCCAAGGAAAATTCCGAATTGGATCCAAAATTGACGGATCGCTTCTTCCAAAGCACGCCCTGTTCGTTCCGCTCGCAACAATCCAATGAGTTCTCCAGAATTGCCTCAACCAAAATTGATGGAATTGGACCTAAAAAAGCCATTCAGGCGGAAGCTGAAAAGAGATTTGAACAGCAGTCTGAAAAGACTAATGCTGCGCAAAAGAATATGTTTCTAAAAAAGAATAAGCACAAAGTGAGTGCAGAAGGACCTGAAAAACATACCGTTCCGACTTCCAAAGGCGATCCTAAGGGAAGAAGAATGAAAGGGATAAGGCTGCAAGAAGAACCTAGAGAGGAAGCTCCACCGAAAGAAGAAGAGGAAATAAGACTCGAGTTTCTGGAAATCTTTCAAGAGGGAGTTCCATAG

Protein sequence

MLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGGAHTLIVLYLAGEGLKPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGVSGSINRDQSFIPGCVGIPIFFILVIDLRVVPTTGGEHLSIRSCAVTESPITPKANFNSPNQGYPSPKAPRDHLPLVFGRRGLLHKNAGTQAPEEGSPTNTRVRYNKAISVHRPSHRAGSWLSKDRIDPLQSLWEKTHYSQVGFIGTPTLGLGRSPSHPVSVPLLLPPPKQIRKEKSISSNSFPIPPKENSELDPKLTDRFFQSTPCSFRSQQSNEFSRIASTKIDGIGPKKAIQAEAEKRFEQQSEKTNAAQKNMFLKKNKHKVSAEGPEKHTVPTSKGDPKGRRMKGIRLQEEPREEAPPKEEEEIRLEFLEIFQEGVP
Homology
[Close]
BLAST of Clc11G08050 vs. NCBI nr
Match: YP_009493632.1 (Ycf68 [Eucommia ulmoides] >YP_009493646.1 Ycf68 [Eucommia ulmoides] >AWN56554.1 Ycf68 [Eucommia ulmoides] >AWN56568.1 Ycf68 [Eucommia ulmoides] >AZT79317.1 Ycf68 [Eucommia ulmoides] >AZT79331.1 Ycf68 [Eucommia ulmoides])

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-16
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 49  LKPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGV-SGSINRDQSF 108
           ++PQWEN+ EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPF F  FP G+   +INR    
Sbjct: 74  VRPQWENQMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFIFHAFPGGLEKAAINRISLI 133

Query: 109 IP 110
           +P
Sbjct: 134 LP 135

[Close]
BLAST of Clc11G08050 vs. NCBI nr
Match: ANP25546.1 (Ycf68 [Eucommia ulmoides] >ANP25560.1 Ycf68 [Eucommia ulmoides])

HSP 1 Score: 98.6 bits (244), Expect = 1.4e-16
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 49  LKPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGV-SGSINRDQSF 108
           ++PQWEN+ EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPF F  FP G+   +INR    
Sbjct: 74  VRPQWENQMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFIFHAFPGGLEKAAINRISLI 133

Query: 109 IP 110
           +P
Sbjct: 134 LP 135

[Close]
BLAST of Clc11G08050 vs. NCBI nr
Match: TYH79861.1 (hypothetical protein ES332_D03G093200v1 [Gossypium tomentosum])

HSP 1 Score: 97.4 bits (241), Expect = 3.0e-16
Identity = 49/85 (57.65%), Postives = 58/85 (68.24%), Query Frame = 0 

Query: 29  GKRQPGGAHT---LIVLYLAGEGLKPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPF 88
           G  + GG  T     +++ +   ++PQWENK EHLTTYLHRPRTTRSPLSFWGDGGIVPF
Sbjct: 28  GSGRSGGTTTAPLFSIIHTSLISVRPQWENKMEHLTTYLHRPRTTRSPLSFWGDGGIVPF 87

Query: 89  EPFFFMLFPEG-VSGSINRDQSFIP 110
           EPFF   FP G    +INR    +P
Sbjct: 88  EPFFH-AFPGGPEKATINRIFLILP 111

[Close]
BLAST of Clc11G08050 vs. NCBI nr
Match: AGZ19190.1 (hypothetical chloroplast RF68 [Camellia sinensis])

HSP 1 Score: 94.0 bits (232), Expect = 3.3e-15
Identity = 45/66 (68.18%), Postives = 50/66 (75.76%), Query Frame = 0 

Query: 45  AGEGLKPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGV-SGSINR 104
           +  GLKP   NK EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFFF  FP G+   +INR
Sbjct: 7   SNRGLKP---NKMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFFHAFPGGLEKAAINR 66

Query: 105 DQSFIP 110
               +P
Sbjct: 67  ISLILP 69

[Close]
BLAST of Clc11G08050 vs. NCBI nr
Match: KAF4348549.1 (hypothetical protein F8388_000228 [Cannabis sativa])

HSP 1 Score: 94.0 bits (232), Expect = 3.3e-15
Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 0 

Query: 48 GLKPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFF 90
          G++PQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEP F
Sbjct: 31 GVRPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPLF 72

[Close]
BLAST of Clc11G08050 vs. ExPASy Swiss-Prot
Match: P03938 (Uncharacterized protein ycf68 OS=Zea mays OX=4577 GN=ycf68 PE=3 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 2.9e-14
Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = 0 

Query: 56  KTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGVSGS-INRDQSFIP 110
           K EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFF   FP G+  + INR    +P
Sbjct: 80  KMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFH-AFPGGLEKAVINRTSLILP 133

[Close]
BLAST of Clc11G08050 vs. ExPASy Swiss-Prot
Match: Q6L3C9 (Uncharacterized protein ycf68 OS=Saccharum hybrid OX=15819 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.9e-14
Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = 0 

Query: 56  KTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGVSGS-INRDQSFIP 110
           K EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFF   FP G+  + INR    +P
Sbjct: 80  KMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFH-AFPGGLEKAVINRTSLILP 133

[Close]
BLAST of Clc11G08050 vs. ExPASy Swiss-Prot
Match: Q6ENQ5 (Uncharacterized protein ycf68 OS=Saccharum officinarum OX=4547 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.9e-14
Identity = 39/55 (70.91%), Postives = 43/55 (78.18%), Query Frame = 0 

Query: 56  KTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGVSGS-INRDQSFIP 110
           K EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFF   FP G+  + INR    +P
Sbjct: 80  KMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFH-AFPGGLEKAVINRTSLILP 133

[Close]
BLAST of Clc11G08050 vs. ExPASy Swiss-Prot
Match: Q6ENB7 (Uncharacterized protein ycf68 OS=Oryza nivara OX=4536 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.8e-06
Identity = 28/62 (45.16%), Postives = 37/62 (59.68%), Query Frame = 0 

Query: 49  LKPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGV-SGSINRDQSF 108
           ++PQWEN   +  +   + +     LSFWGDGGIVPFEPFF   FP G+   +INR    
Sbjct: 74  VRPQWENGAPNNAS--SQTKNYEITLSFWGDGGIVPFEPFFH-AFPGGLEKAAINRTSLI 132

Query: 109 IP 110
           +P
Sbjct: 134 LP 132

[Close]
BLAST of Clc11G08050 vs. ExPASy Swiss-Prot
Match: P0C304 (Uncharacterized protein ycf68 OS=Oryza sativa OX=4530 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 3.8e-06
Identity = 28/62 (45.16%), Postives = 37/62 (59.68%), Query Frame = 0 

Query: 49  LKPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGV-SGSINRDQSF 108
           ++PQWEN   +  +   + +     LSFWGDGGIVPFEPFF   FP G+   +INR    
Sbjct: 74  VRPQWENGAPNNAS--SQTKNYEITLSFWGDGGIVPFEPFFH-AFPGGLEKAAINRTSLI 132

Query: 109 IP 110
           +P
Sbjct: 134 LP 132

[Close]
BLAST of Clc11G08050 vs. ExPASy TrEMBL
Match: A0A2U8XDR1 (Uncharacterized protein ycf68 OS=Eucommia ulmoides OX=4392 GN=ycf68 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 6.5e-17
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 49  LKPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGV-SGSINRDQSF 108
           ++PQWEN+ EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPF F  FP G+   +INR    
Sbjct: 74  VRPQWENQMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFIFHAFPGGLEKAAINRISLI 133

Query: 109 IP 110
           +P
Sbjct: 134 LP 135

[Close]
BLAST of Clc11G08050 vs. ExPASy TrEMBL
Match: A0A1B0ZD71 (Uncharacterized protein ycf68 OS=Eucommia ulmoides OX=4392 GN=ycf68 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 6.5e-17
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 49  LKPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGV-SGSINRDQSF 108
           ++PQWEN+ EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPF F  FP G+   +INR    
Sbjct: 74  VRPQWENQMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFIFHAFPGGLEKAAINRISLI 133

Query: 109 IP 110
           +P
Sbjct: 134 LP 135

[Close]
BLAST of Clc11G08050 vs. ExPASy TrEMBL
Match: A0A5D2LK82 (Uncharacterized protein ycf68 OS=Gossypium tomentosum OX=34277 GN=ES332_D03G093200v1 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-16
Identity = 49/85 (57.65%), Postives = 58/85 (68.24%), Query Frame = 0 

Query: 29  GKRQPGGAHT---LIVLYLAGEGLKPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPF 88
           G  + GG  T     +++ +   ++PQWENK EHLTTYLHRPRTTRSPLSFWGDGGIVPF
Sbjct: 28  GSGRSGGTTTAPLFSIIHTSLISVRPQWENKMEHLTTYLHRPRTTRSPLSFWGDGGIVPF 87

Query: 89  EPFFFMLFPEG-VSGSINRDQSFIP 110
           EPFF   FP G    +INR    +P
Sbjct: 88  EPFFH-AFPGGPEKATINRIFLILP 111

[Close]
BLAST of Clc11G08050 vs. ExPASy TrEMBL
Match: U5U7J0 (Uncharacterized protein ycf68 OS=Camellia sinensis OX=4442 GN=ycf68 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.6e-15
Identity = 45/66 (68.18%), Postives = 50/66 (75.76%), Query Frame = 0 

Query: 45  AGEGLKPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFFFMLFPEGV-SGSINR 104
           +  GLKP   NK EHLTT+LHRPRTTRSPLSFWGDGGIVPFEPFFF  FP G+   +INR
Sbjct: 7   SNRGLKP---NKMEHLTTHLHRPRTTRSPLSFWGDGGIVPFEPFFFHAFPGGLEKAAINR 66

Query: 105 DQSFIP 110
               +P
Sbjct: 67  ISLILP 69

[Close]
BLAST of Clc11G08050 vs. ExPASy TrEMBL
Match: A0A7J6DSE9 (Uncharacterized protein ycf68 OS=Cannabis sativa OX=3483 GN=F8388_000228 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.6e-15
Identity = 39/42 (92.86%), Postives = 41/42 (97.62%), Query Frame = 0 

Query: 48 GLKPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPFF 90
          G++PQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEP F
Sbjct: 31 GVRPQWENKTEHLTTYLHRPRTTRSPLSFWGDGGIVPFEPLF 72

The following BLAST results are available for this feature:
BLAST of Clc11G08050 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_009493632.11.4e-1669.35Ycf68 [Eucommia ulmoides] >YP_009493646.1 Ycf68 [Eucommia ulmoides] >AWN56554.1 ... [more]
ANP25546.11.4e-1669.35Ycf68 [Eucommia ulmoides] >ANP25560.1 Ycf68 [Eucommia ulmoides][more]
TYH79861.13.0e-1657.65hypothetical protein ES332_D03G093200v1 [Gossypium tomentosum][more]
AGZ19190.13.3e-1568.18hypothetical chloroplast RF68 [Camellia sinensis][more]
KAF4348549.13.3e-1592.86hypothetical protein F8388_000228 [Cannabis sativa][more]
BLAST of Clc11G08050 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P039382.9e-1470.91Uncharacterized protein ycf68 OS=Zea mays OX=4577 GN=ycf68 PE=3 SV=2[more]
Q6L3C92.9e-1470.91Uncharacterized protein ycf68 OS=Saccharum hybrid OX=15819 GN=ycf68-1 PE=3 SV=1[more]
Q6ENQ52.9e-1470.91Uncharacterized protein ycf68 OS=Saccharum officinarum OX=4547 GN=ycf68-1 PE=3 S... [more]
Q6ENB73.8e-0645.16Uncharacterized protein ycf68 OS=Oryza nivara OX=4536 GN=ycf68-1 PE=3 SV=1[more]
P0C3043.8e-0645.16Uncharacterized protein ycf68 OS=Oryza sativa OX=4530 GN=ycf68-1 PE=3 SV=1[more]
BLAST of Clc11G08050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2U8XDR16.5e-1769.35Uncharacterized protein ycf68 OS=Eucommia ulmoides OX=4392 GN=ycf68 PE=3 SV=1[more]
A0A1B0ZD716.5e-1769.35Uncharacterized protein ycf68 OS=Eucommia ulmoides OX=4392 GN=ycf68 PE=3 SV=1[more]
A0A5D2LK821.5e-1657.65Uncharacterized protein ycf68 OS=Gossypium tomentosum OX=34277 GN=ES332_D03G0932... [more]
U5U7J01.6e-1568.18Uncharacterized protein ycf68 OS=Camellia sinensis OX=4442 GN=ycf68 PE=3 SV=1[more]
A0A7J6DSE91.6e-1592.86Uncharacterized protein ycf68 OS=Cannabis sativa OX=3483 GN=F8388_000228 PE=3 SV... [more]
BLAST of Clc11G08050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 331..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 359..404
NoneNo IPR availablePANTHERPTHR34890:SF10SUBFAMILY NOT NAMEDcoord: 54..103
IPR022546Uncharacterised protein family Ycf68PANTHERPTHR34890FAMILY NOT NAMEDcoord: 54..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc11G08050.1Clc11G08050.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009507 chloroplast