Homology
BLAST of Clc10G13390 vs. NCBI nr
Match:
XP_038903222.1 (50S ribosomal protein L12, chloroplastic-like [Benincasa hispida])
HSP 1 Score: 313.5 bits (802), Expect = 1.2e-81
Identity = 182/191 (95.29%), Postives = 185/191 (96.86%), Query Frame = 0
Query: 1 MSSTLSTASLRSPSSSSSSYPSNFSHSLKPTPLNFPFSFSPTNLSLRLVRHRPISAVAVP 60
MSSTLSTASLRSPSSS SSYPSNFSHSLKPTPLNFPFSFS TNLSLRLV HRPISAVAVP
Sbjct: 1 MSSTLSTASLRSPSSSLSSYPSNFSHSLKPTPLNFPFSFSSTNLSLRLVHHRPISAVAVP 60
Query: 61 EKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAAAVVEE 120
EKVS+IGDVIS+LTLEEARTLVDYLQEKLGVSAA+FAPA VAVAPGAAAGGD AAA VEE
Sbjct: 61 EKVSEIGDVISQLTLEEARTLVDYLQEKLGVSAASFAPAVVAVAPGAAAGGDDAAAAVEE 120
Query: 121 KTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180
KTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ
Sbjct: 121 KTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180
Query: 181 LEEAGAKIAIV 192
LEEAGAKIAIV
Sbjct: 181 LEEAGAKIAIV 191
BLAST of Clc10G13390 vs. NCBI nr
Match:
XP_008443526.1 (PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Cucumis melo] >KAA0053661.1 50S ribosomal protein L12 [Cucumis melo var. makuwa] >TYK00831.1 50S ribosomal protein L12 [Cucumis melo var. makuwa])
HSP 1 Score: 313.2 bits (801), Expect = 1.6e-81
Identity = 183/193 (94.82%), Postives = 187/193 (96.89%), Query Frame = 0
Query: 1 MSSTLSTASLR--SPSSSSSSYPSNFSHSLKPTPLNFPFSFSPTNLSLRLVRHRPISAVA 60
MSSTLSTASLR SPSSSSSSYPSNFSHSLKPTPL FPFSF+PTNLSLRL+ HRPISAVA
Sbjct: 1 MSSTLSTASLRSPSPSSSSSSYPSNFSHSLKPTPLRFPFSFAPTNLSLRLIHHRPISAVA 60
Query: 61 VPEKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAAAVV 120
VPEKVS+IGDVISKLTLEEARTLVDYLQEKLGVSAA+FAPAAVAVAPGAAAGGD AAA V
Sbjct: 61 VPEKVSEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAAVAVAPGAAAGGDDAAAAV 120
Query: 121 EEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK 180
EEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK
Sbjct: 121 EEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK 180
Query: 181 KQLEEAGAKIAIV 192
KQLEEAGAKIAIV
Sbjct: 181 KQLEEAGAKIAIV 193
BLAST of Clc10G13390 vs. NCBI nr
Match:
XP_004141094.1 (50S ribosomal protein L12, chloroplastic [Cucumis sativus] >KGN59676.1 hypothetical protein Csa_002198 [Cucumis sativus])
HSP 1 Score: 309.3 bits (791), Expect = 2.3e-80
Identity = 177/191 (92.67%), Postives = 183/191 (95.81%), Query Frame = 0
Query: 1 MSSTLSTASLRSPSSSSSSYPSNFSHSLKPTPLNFPFSFSPTNLSLRLVRHRPISAVAVP 60
MSSTLSTASLRSPSSSSSSYPSNFSHSLKPTPL FPFSF+PTNLSLRL+ HRPISAVAVP
Sbjct: 1 MSSTLSTASLRSPSSSSSSYPSNFSHSLKPTPLRFPFSFAPTNLSLRLIHHRPISAVAVP 60
Query: 61 EKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAAAVVEE 120
EKVS+IGDVISKLTLEEARTLVDYLQEKLGVSAA+FAPA VAPG AAGGD AAA VEE
Sbjct: 61 EKVSEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAPATVAPGTAAGGDDAAAAVEE 120
Query: 121 KTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180
KTEFDVVIEEVPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ
Sbjct: 121 KTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180
Query: 181 LEEAGAKIAIV 192
LEEAGAKI+IV
Sbjct: 181 LEEAGAKISIV 191
BLAST of Clc10G13390 vs. NCBI nr
Match:
XP_022983181.1 (50S ribosomal protein L12, chloroplastic-like [Cucurbita maxima])
HSP 1 Score: 287.7 bits (735), Expect = 7.2e-74
Identity = 171/191 (89.53%), Postives = 178/191 (93.19%), Query Frame = 0
Query: 1 MSSTLSTASLRSPSSSSSSYPSNFSHSLKPTPLNFPFSFSPTNLSLRLVRHRPISAVAVP 60
MSS LSTASLR PS SSSSYPSNFSHSL+ T + FPFSFS TNLSLR V RP+SA AVP
Sbjct: 1 MSSALSTASLRLPSCSSSSYPSNFSHSLRSTSIQFPFSFSSTNLSLRFVHCRPLSAAAVP 60
Query: 61 EKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAAAVVEE 120
EKV++IGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAA+GGD AAA VEE
Sbjct: 61 EKVTEIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAASGGDDAAA-VEE 120
Query: 121 KTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180
KTEFDVVIEEVPSNARI+VIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ
Sbjct: 121 KTEFDVVIEEVPSNARISVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180
Query: 181 LEEAGAKIAIV 192
LEEAGAKIAIV
Sbjct: 181 LEEAGAKIAIV 190
BLAST of Clc10G13390 vs. NCBI nr
Match:
XP_022934872.1 (50S ribosomal protein L12, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 287.3 bits (734), Expect = 9.4e-74
Identity = 171/191 (89.53%), Postives = 177/191 (92.67%), Query Frame = 0
Query: 1 MSSTLSTASLRSPSSSSSSYPSNFSHSLKPTPLNFPFSFSPTNLSLRLVRHRPISAVAVP 60
MSS LSTASLR PS SSSSYPSNFSHSL+ T + FPFSFS TNLSLR V RP+SA AVP
Sbjct: 1 MSSALSTASLRFPSCSSSSYPSNFSHSLRSTSIQFPFSFSSTNLSLRFVHCRPLSAAAVP 60
Query: 61 EKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAAAVVEE 120
EKV++IGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAV VAPGAAAGGD AAA VEE
Sbjct: 61 EKVTEIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVVVAPGAAAGGDDAAA-VEE 120
Query: 121 KTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180
KTEFDVVIEEVPSNARI+VIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ
Sbjct: 121 KTEFDVVIEEVPSNARISVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180
Query: 181 LEEAGAKIAIV 192
LEEAGAKIAIV
Sbjct: 181 LEEAGAKIAIV 190
BLAST of Clc10G13390 vs. ExPASy Swiss-Prot
Match:
P24929 (50S ribosomal protein L12, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL12 PE=1 SV=1)
HSP 1 Score: 199.1 bits (505), Expect = 4.4e-50
Identity = 131/193 (67.88%), Postives = 152/193 (78.76%), Query Frame = 0
Query: 1 MSSTLSTASLRSPSSSSSSYPSNFSHSLKPTP---LNFPFSFSPTNLSLRLVRHRPISAV 60
M+STLST +LRSPS S++S +H+ P P L FP +P R RP++AV
Sbjct: 1 MASTLSTITLRSPSPSTAS----STHASIPFPKKALEFPIR-TPKLHHRRATFLRPLAAV 60
Query: 61 AVPEKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAAAV 120
PEKV +GD IS LTL +A+ LV+YLQ+KLGV+AA+FAPAAVA APGAAA A AV
Sbjct: 61 EAPEKVVQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAAVAAAPGAAA---EAPAV 120
Query: 121 VEEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDA 180
VEEKTEFDVVI+EVPSNARIA IKAVRALTSLALKEAKELIEGLPKKFKEG+SK+EAEDA
Sbjct: 121 VEEKTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKEGVSKDEAEDA 180
Query: 181 KKQLEEAGAKIAI 191
KKQLEEAGAK++I
Sbjct: 181 KKQLEEAGAKVSI 185
BLAST of Clc10G13390 vs. ExPASy Swiss-Prot
Match:
P36688 (50S ribosomal protein L12, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)
HSP 1 Score: 197.6 bits (501), Expect = 1.3e-49
Identity = 129/193 (66.84%), Postives = 152/193 (78.76%), Query Frame = 0
Query: 1 MSSTLSTASLRSPSSSSSSYPSNFSHSLKPTP---LNFPFSFSPTNLSLRLVRHRPISAV 60
M+STLST +LRSPS S+++ +H+ P P L FP +P + R RP++AV
Sbjct: 1 MASTLSTITLRSPSPSTAT----STHASIPFPKKTLEFPIR-TPKLQNRRATFLRPLAAV 60
Query: 61 AVPEKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAAAV 120
PEKV +GD IS LTL +A+ LV+YLQ+KLGV+AA+FAPAAV APGAAA A AV
Sbjct: 61 EAPEKVVQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAAVVAAPGAAA---EAPAV 120
Query: 121 VEEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDA 180
VEEKTEFDVVI+EVPSNARIA IKAVRALTSLALKEAKELIEGLPKKFKEG+SK+EAEDA
Sbjct: 121 VEEKTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKEGVSKDEAEDA 180
Query: 181 KKQLEEAGAKIAI 191
KKQLEEAGAK++I
Sbjct: 181 KKQLEEAGAKVSI 185
BLAST of Clc10G13390 vs. ExPASy Swiss-Prot
Match:
P02398 (50S ribosomal protein L12, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL12 PE=1 SV=2)
HSP 1 Score: 193.4 bits (490), Expect = 2.4e-48
Identity = 122/194 (62.89%), Postives = 148/194 (76.29%), Query Frame = 0
Query: 1 MSSTLSTASLRSPSSSSSSYPSNFSHSLKPTPLNFPFSFSPTNLSL---RLVRHRPISAV 60
M++T + A+L P S +S+P++ + P PL FPF + +SL R R RPI+AV
Sbjct: 1 MAATTTMATLNLP--SLTSHPNSSTFPKHPQPLQFPFRTTTNPISLSSTRTTRLRPIAAV 60
Query: 61 AVPEKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAAAV 120
PEK+ +G +S LTLEEAR LVD+LQ+KLGVSAA+FAPAA APGA A AA
Sbjct: 61 EAPEKIEQLGTQLSGLTLEEARVLVDWLQDKLGVSAASFAPAAAVAAPGAPAD---AAPA 120
Query: 121 VEEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDA 180
VEEKTEFDV I+EVPSNARI+VIKAVRALTSL LKEAKELIEGLPKK KEG+SK++AEDA
Sbjct: 121 VEEKTEFDVSIDEVPSNARISVIKAVRALTSLGLKEAKELIEGLPKKLKEGVSKDDAEDA 180
Query: 181 KKQLEEAGAKIAIV 192
KKQLE+AGAK++IV
Sbjct: 181 KKQLEDAGAKVSIV 189
BLAST of Clc10G13390 vs. ExPASy Swiss-Prot
Match:
P36212 (50S ribosomal protein L12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL12C PE=2 SV=2)
HSP 1 Score: 185.7 bits (470), Expect = 5.1e-46
Identity = 125/190 (65.79%), Postives = 146/190 (76.84%), Query Frame = 0
Query: 2 SSTLSTA-SLRSPSSSSSSYPSNFSHSLKPTPLNFPFSFSPTNLSLRLVRHRPISAVAVP 61
S+TLS A ++RS S +S+ +F KPT + FPF S ++ S R + RPISAV P
Sbjct: 3 STTLSIATTIRSSSPLTSASTHHFLS--KPTAIEFPFRLSSSS-SHRAINLRPISAVEAP 62
Query: 62 EKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAAAVVEE 121
EK+ IG IS LTLEEAR LVDYLQ+K GVS + APAA AVA A G AAAVVEE
Sbjct: 63 EKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPADGG---AAAVVEE 122
Query: 122 KTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 181
+TEFDVVI EVPS++RIAVIKAVRALTSLALKEAKELIEGLPKKFKEGI+K+EAE+AKK
Sbjct: 123 QTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAEEAKKT 182
Query: 182 LEEAGAKIAI 191
LEEAGAK++I
Sbjct: 183 LEEAGAKVSI 186
BLAST of Clc10G13390 vs. ExPASy Swiss-Prot
Match:
P36210 (50S ribosomal protein L12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL12A PE=2 SV=1)
HSP 1 Score: 178.3 bits (451), Expect = 8.1e-44
Identity = 124/195 (63.59%), Postives = 144/195 (73.85%), Query Frame = 0
Query: 2 SSTLSTASLRSPSSSSSSYPSNFSHSLKP---TPLNFPFSF---SPTNLSLRLVRHRPIS 61
S+TLS A+ + SSSYP+ S + P T + FP F S + L+ R RPI+
Sbjct: 3 STTLSIAT----TIRSSSYPTLASINHFPSRTTTIEFPSRFGGGSSSTLTHRATHLRPIA 62
Query: 62 AVAVPEKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAA 121
AV PEK+ IG IS LTLEEAR LVDYLQ+K GVS + APAA AVA A G AA
Sbjct: 63 AVEAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPADGG---AA 122
Query: 122 AVVEEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAE 181
AVVEE+TEFDVVI EVPS++RIAVIKAVRALTSLALKEAKELIEGLPKKFKEGI+K+EAE
Sbjct: 123 AVVEEQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAE 182
Query: 182 DAKKQLEEAGAKIAI 191
+AKK LEEAGAK++I
Sbjct: 183 EAKKTLEEAGAKVSI 190
BLAST of Clc10G13390 vs. ExPASy TrEMBL
Match:
A0A5A7UJJ4 (50S ribosomal protein L12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00330 PE=3 SV=1)
HSP 1 Score: 313.2 bits (801), Expect = 7.7e-82
Identity = 183/193 (94.82%), Postives = 187/193 (96.89%), Query Frame = 0
Query: 1 MSSTLSTASLR--SPSSSSSSYPSNFSHSLKPTPLNFPFSFSPTNLSLRLVRHRPISAVA 60
MSSTLSTASLR SPSSSSSSYPSNFSHSLKPTPL FPFSF+PTNLSLRL+ HRPISAVA
Sbjct: 1 MSSTLSTASLRSPSPSSSSSSYPSNFSHSLKPTPLRFPFSFAPTNLSLRLIHHRPISAVA 60
Query: 61 VPEKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAAAVV 120
VPEKVS+IGDVISKLTLEEARTLVDYLQEKLGVSAA+FAPAAVAVAPGAAAGGD AAA V
Sbjct: 61 VPEKVSEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAAVAVAPGAAAGGDDAAAAV 120
Query: 121 EEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK 180
EEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK
Sbjct: 121 EEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK 180
Query: 181 KQLEEAGAKIAIV 192
KQLEEAGAKIAIV
Sbjct: 181 KQLEEAGAKIAIV 193
BLAST of Clc10G13390 vs. ExPASy TrEMBL
Match:
A0A1S3B8B3 (50S ribosomal protein L12, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487096 PE=3 SV=1)
HSP 1 Score: 313.2 bits (801), Expect = 7.7e-82
Identity = 183/193 (94.82%), Postives = 187/193 (96.89%), Query Frame = 0
Query: 1 MSSTLSTASLR--SPSSSSSSYPSNFSHSLKPTPLNFPFSFSPTNLSLRLVRHRPISAVA 60
MSSTLSTASLR SPSSSSSSYPSNFSHSLKPTPL FPFSF+PTNLSLRL+ HRPISAVA
Sbjct: 1 MSSTLSTASLRSPSPSSSSSSYPSNFSHSLKPTPLRFPFSFAPTNLSLRLIHHRPISAVA 60
Query: 61 VPEKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAAAVV 120
VPEKVS+IGDVISKLTLEEARTLVDYLQEKLGVSAA+FAPAAVAVAPGAAAGGD AAA V
Sbjct: 61 VPEKVSEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAAVAVAPGAAAGGDDAAAAV 120
Query: 121 EEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK 180
EEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK
Sbjct: 121 EEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK 180
Query: 181 KQLEEAGAKIAIV 192
KQLEEAGAKIAIV
Sbjct: 181 KQLEEAGAKIAIV 193
BLAST of Clc10G13390 vs. ExPASy TrEMBL
Match:
A0A0A0LHZ4 (Ribosomal protein L12-C OS=Cucumis sativus OX=3659 GN=Csa_3G837570 PE=3 SV=1)
HSP 1 Score: 309.3 bits (791), Expect = 1.1e-80
Identity = 177/191 (92.67%), Postives = 183/191 (95.81%), Query Frame = 0
Query: 1 MSSTLSTASLRSPSSSSSSYPSNFSHSLKPTPLNFPFSFSPTNLSLRLVRHRPISAVAVP 60
MSSTLSTASLRSPSSSSSSYPSNFSHSLKPTPL FPFSF+PTNLSLRL+ HRPISAVAVP
Sbjct: 1 MSSTLSTASLRSPSSSSSSYPSNFSHSLKPTPLRFPFSFAPTNLSLRLIHHRPISAVAVP 60
Query: 61 EKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAAAVVEE 120
EKVS+IGDVISKLTLEEARTLVDYLQEKLGVSAA+FAPA VAPG AAGGD AAA VEE
Sbjct: 61 EKVSEIGDVISKLTLEEARTLVDYLQEKLGVSAASFAPAPATVAPGTAAGGDDAAAAVEE 120
Query: 121 KTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180
KTEFDVVIEEVPSNARIAVIK+VRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ
Sbjct: 121 KTEFDVVIEEVPSNARIAVIKSVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180
Query: 181 LEEAGAKIAIV 192
LEEAGAKI+IV
Sbjct: 181 LEEAGAKISIV 191
BLAST of Clc10G13390 vs. ExPASy TrEMBL
Match:
A0A6J1J1D9 (50S ribosomal protein L12, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111481837 PE=3 SV=1)
HSP 1 Score: 287.7 bits (735), Expect = 3.5e-74
Identity = 171/191 (89.53%), Postives = 178/191 (93.19%), Query Frame = 0
Query: 1 MSSTLSTASLRSPSSSSSSYPSNFSHSLKPTPLNFPFSFSPTNLSLRLVRHRPISAVAVP 60
MSS LSTASLR PS SSSSYPSNFSHSL+ T + FPFSFS TNLSLR V RP+SA AVP
Sbjct: 1 MSSALSTASLRLPSCSSSSYPSNFSHSLRSTSIQFPFSFSSTNLSLRFVHCRPLSAAAVP 60
Query: 61 EKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAAAVVEE 120
EKV++IGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAA+GGD AAA VEE
Sbjct: 61 EKVTEIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAASGGDDAAA-VEE 120
Query: 121 KTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180
KTEFDVVIEEVPSNARI+VIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ
Sbjct: 121 KTEFDVVIEEVPSNARISVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180
Query: 181 LEEAGAKIAIV 192
LEEAGAKIAIV
Sbjct: 181 LEEAGAKIAIV 190
BLAST of Clc10G13390 vs. ExPASy TrEMBL
Match:
A0A6J1F403 (50S ribosomal protein L12, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111441912 PE=3 SV=1)
HSP 1 Score: 287.3 bits (734), Expect = 4.6e-74
Identity = 171/191 (89.53%), Postives = 177/191 (92.67%), Query Frame = 0
Query: 1 MSSTLSTASLRSPSSSSSSYPSNFSHSLKPTPLNFPFSFSPTNLSLRLVRHRPISAVAVP 60
MSS LSTASLR PS SSSSYPSNFSHSL+ T + FPFSFS TNLSLR V RP+SA AVP
Sbjct: 1 MSSALSTASLRFPSCSSSSYPSNFSHSLRSTSIQFPFSFSSTNLSLRFVHCRPLSAAAVP 60
Query: 61 EKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAAAVVEE 120
EKV++IGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAV VAPGAAAGGD AAA VEE
Sbjct: 61 EKVTEIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVVVAPGAAAGGDDAAA-VEE 120
Query: 121 KTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180
KTEFDVVIEEVPSNARI+VIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ
Sbjct: 121 KTEFDVVIEEVPSNARISVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 180
Query: 181 LEEAGAKIAIV 192
LEEAGAKIAIV
Sbjct: 181 LEEAGAKIAIV 190
BLAST of Clc10G13390 vs. TAIR 10
Match:
AT3G27850.1 (ribosomal protein L12-C )
HSP 1 Score: 185.7 bits (470), Expect = 3.6e-47
Identity = 125/190 (65.79%), Postives = 146/190 (76.84%), Query Frame = 0
Query: 2 SSTLSTA-SLRSPSSSSSSYPSNFSHSLKPTPLNFPFSFSPTNLSLRLVRHRPISAVAVP 61
S+TLS A ++RS S +S+ +F KPT + FPF S ++ S R + RPISAV P
Sbjct: 3 STTLSIATTIRSSSPLTSASTHHFLS--KPTAIEFPFRLSSSS-SHRAINLRPISAVEAP 62
Query: 62 EKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAAAVVEE 121
EK+ IG IS LTLEEAR LVDYLQ+K GVS + APAA AVA A G AAAVVEE
Sbjct: 63 EKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPADGG---AAAVVEE 122
Query: 122 KTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQ 181
+TEFDVVI EVPS++RIAVIKAVRALTSLALKEAKELIEGLPKKFKEGI+K+EAE+AKK
Sbjct: 123 QTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAEEAKKT 182
Query: 182 LEEAGAKIAI 191
LEEAGAK++I
Sbjct: 183 LEEAGAKVSI 186
BLAST of Clc10G13390 vs. TAIR 10
Match:
AT3G27830.1 (ribosomal protein L12-A )
HSP 1 Score: 178.3 bits (451), Expect = 5.7e-45
Identity = 124/195 (63.59%), Postives = 144/195 (73.85%), Query Frame = 0
Query: 2 SSTLSTASLRSPSSSSSSYPSNFSHSLKP---TPLNFPFSF---SPTNLSLRLVRHRPIS 61
S+TLS A+ + SSSYP+ S + P T + FP F S + L+ R RPI+
Sbjct: 3 STTLSIAT----TIRSSSYPTLASINHFPSRTTTIEFPSRFGGGSSSTLTHRATHLRPIA 62
Query: 62 AVAVPEKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAA 121
AV PEK+ IG IS LTLEEAR LVDYLQ+K GVS + APAA AVA A G AA
Sbjct: 63 AVEAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPADGG---AA 122
Query: 122 AVVEEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAE 181
AVVEE+TEFDVVI EVPS++RIAVIKAVRALTSLALKEAKELIEGLPKKFKEGI+K+EAE
Sbjct: 123 AVVEEQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAE 182
Query: 182 DAKKQLEEAGAKIAI 191
+AKK LEEAGAK++I
Sbjct: 183 EAKKTLEEAGAKVSI 190
BLAST of Clc10G13390 vs. TAIR 10
Match:
AT3G27840.1 (ribosomal protein L12-B )
HSP 1 Score: 157.5 bits (397), Expect = 1.0e-38
Identity = 106/193 (54.92%), Postives = 131/193 (67.88%), Query Frame = 0
Query: 2 SSTLSTASLRSPSSSSSSYPSNFSHSLKPTPLNFPFSF---SPTNLSLRLVRHRPISAVA 61
++TLS A+ SS SS S +P + FPFSF S + LS R + PISAV
Sbjct: 3 ATTLSIATTIRSSSFSSGLASAHHFPSRPLSIEFPFSFGVSSSSTLSHRAIYLHPISAVK 62
Query: 62 VPEKVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGAAAGGDVAAAVV 121
P+K+ IG IS LTLEE+R LVDY+Q+K GVS APAA A+ P GG A A V
Sbjct: 63 TPKKIKKIGSEISSLTLEESRILVDYVQDKFGVSILFSAPAAAALPPPLDNGG--ATASV 122
Query: 122 EEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK 181
E +T FDVVI +VP RIAVI A+RA+TSL+L E+KELIEG PKKFKEG++K+EAE+ K
Sbjct: 123 ERQTTFDVVINDVPRGNRIAVITAIRAMTSLSLSESKELIEGFPKKFKEGVTKDEAEEDK 182
Query: 182 KQLEEAGAKIAIV 192
QLEEAGAK++IV
Sbjct: 183 TQLEEAGAKVSIV 193
BLAST of Clc10G13390 vs. TAIR 10
Match:
AT4G36420.1 (Ribosomal protein L12 family protein )
HSP 1 Score: 78.2 bits (191), Expect = 8.1e-15
Identity = 67/176 (38.07%), Postives = 99/176 (56.25%), Query Frame = 0
Query: 22 SNFSHSLKPTPLNFPFSFSPTNLSLRLVRHRPISAVAV-PEKVSDIGDVISKLTLEEART 81
S+FS LK T +++ L ++ R S+ A E VS I + +S LTL E
Sbjct: 9 SHFSRVLKSTETR------SSSVQLFTIQSRSYSSPATQSENVSKIVNELSNLTLLETMD 68
Query: 82 LVDYLQEKLGVS----AAAFAPAAVAVAPGA--AAGGDVAAAVVEEKTEFDVVIEEVPSN 141
L + L++KL +S AA P GA +AGG+ E KT FDV+++ +
Sbjct: 69 LTEILRQKLNISELPVMAAMMPGMSLPGSGASKSAGGEGKEKKKEAKTAFDVMLQAYDAV 128
Query: 142 ARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAKKQLEEAGAKIAI 191
++I VIK VR +T+L LKEAK+L+E P K+G+SKEEAE ++L+ GAK+A+
Sbjct: 129 SKIKVIKEVRTITALGLKEAKDLVEKAPTLLKKGVSKEEAEKIIEKLKAVGAKVAM 178
BLAST of Clc10G13390 vs. TAIR 10
Match:
AT4G37660.1 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein )
HSP 1 Score: 62.0 bits (149), Expect = 6.0e-10
Identity = 53/143 (37.06%), Postives = 75/143 (52.45%), Query Frame = 0
Query: 52 RPISAVAVPE----KVSDIGDVISKLTLEEARTLVDYLQEKLGVSAAAFAPAAVAVAPGA 111
R + AVA PE K+ I D + KL E K+G++ A A A
Sbjct: 27 RHLCAVASPEARTKKLERIADDLLKLNRIELYDYSLLFSHKIGLNRYGSAVAVTGSVGDA 86
Query: 112 AAGGDVAAAVVEEKTEFDVVIEEVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKE 171
+A + A EKT FDV +E+ + ++I VIK +RA T L LKEAK L+E P K
Sbjct: 87 SASTETKTA---EKTTFDVKLEKFEAASKIKVIKEIRAFTDLGLKEAKALVEKAPVIVKN 146
Query: 172 GISKEEAEDAKKQLEEAGAKIAI 191
G++KEEAE ++L+ GA +A+
Sbjct: 147 GLTKEEAEKIMEKLKAVGAIVAL 166
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038903222.1 | 1.2e-81 | 95.29 | 50S ribosomal protein L12, chloroplastic-like [Benincasa hispida] | [more] |
XP_008443526.1 | 1.6e-81 | 94.82 | PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Cucumis melo] >KAA0053... | [more] |
XP_004141094.1 | 2.3e-80 | 92.67 | 50S ribosomal protein L12, chloroplastic [Cucumis sativus] >KGN59676.1 hypotheti... | [more] |
XP_022983181.1 | 7.2e-74 | 89.53 | 50S ribosomal protein L12, chloroplastic-like [Cucurbita maxima] | [more] |
XP_022934872.1 | 9.4e-74 | 89.53 | 50S ribosomal protein L12, chloroplastic-like [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
P24929 | 4.4e-50 | 67.88 | 50S ribosomal protein L12, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL12 P... | [more] |
P36688 | 1.3e-49 | 66.84 | 50S ribosomal protein L12, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 SV... | [more] |
P02398 | 2.4e-48 | 62.89 | 50S ribosomal protein L12, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL12 P... | [more] |
P36212 | 5.1e-46 | 65.79 | 50S ribosomal protein L12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RP... | [more] |
P36210 | 8.1e-44 | 63.59 | 50S ribosomal protein L12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RP... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7UJJ4 | 7.7e-82 | 94.82 | 50S ribosomal protein L12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... | [more] |
A0A1S3B8B3 | 7.7e-82 | 94.82 | 50S ribosomal protein L12, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC1034... | [more] |
A0A0A0LHZ4 | 1.1e-80 | 92.67 | Ribosomal protein L12-C OS=Cucumis sativus OX=3659 GN=Csa_3G837570 PE=3 SV=1 | [more] |
A0A6J1J1D9 | 3.5e-74 | 89.53 | 50S ribosomal protein L12, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC... | [more] |
A0A6J1F403 | 4.6e-74 | 89.53 | 50S ribosomal protein L12, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L... | [more] |