Clc09G19870 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G19870
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Ribosomal protein L34e superfamily protein
Location	ClcChr09: 33377033 .. 33378258 (+)
RNA-Seq Expression	Clc09G19870
Synteny	Clc09G19870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGCCAAAGCCCATGGAGGGAGTGTCCCACCAAATCATTCTCACATGATGAAACGAGAAATCCAAAGCCCAGAAGCCGAAGTAGCCCACGTAAGCTTCCTTCTTCTTCATCCTCTGACTTAGCCGATTGCCATTTCCCAAAATTTTCAACCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTCTTTAAGAGATGTGGCTTTAAAGCTCCAAATCACGCTCTCGCCACTCTTTGCTTCTTTATTATCTGTCTCCGCTTCTTTGGCTTTAACCCGTTTTGCCGATTTCTTCCAACCCCATTACCTCTTTTTTTTTTTTTTGGTTTAATTACGATTTCGATTCCATTTGATTGAGGAGTTGGATTGGTTTAGACGCCGACAAAATTCTGGGTTTTCTTTTTCATTTCCAATTAATAATACCCTCTTTTTTTATTTGGAATTTTTCTTTGAGTTGTTCGATCTGATTTGGGTTTTGAATTGCTGGATGTGATTGATTGAATCGGGGAGTTTCAATCGCAGTTTGATTGGAATTCGATTTGAGATGGTCTATTTCCCATACTCGATCTCGGTCTGCAAGTCCGTTGACCAACCAACCGTCATGGCGAGTTCAGTGAATTTAGCCGATTCAAGTTCCAAATCAAGGAACAAGAAGATGACTGCCTCATCCACTTGTTCCAAATTCCCTGTTTGTCATCGGTCTCGATCGGCCGTAATCGATATTGTGATTTTGATCGCTGTGGTTGGTGCTTGTGGGTTTTTGTTATTCCCTTATATGAAGCTTGTTATCGTTGAATCCCTCGAGATTTTCGGGGCGATTCTGTATTTAATGGGAGAGGAAGTCTCTCGTGCTCCTTGGATTTATGGATCCATTGGACTTAGCATTTTCTGTGCTTCATTAGCTGCTTGGGTTGTTTTAATATGCACGAGCAGGAAATGTGGGAATCCTTATTGCAAGGGGCTTCGAAAGGCGGCTGAATTCGATATCCAATTGGAGACGGAGGAGTGTGTGAAGAACTCCACTCCATTGGTTAAGAATGGAGTGAAGAAAGGGCTTTTTGAATTGCCCCGTGATCATCACCGCGAATTAGAAGCTGAACTTAAGAAGATGGCACCTCCTAATGGAAGAGCAGTGCTCATTTTCCGAGCAAGATGTGGCTGTTCTGTTGGTAGGTTGGAAGTTCCTGGGCCTAGGAAGCAGCTGAAGAAGATCAAGAAATAG

mRNA sequence

ATGTGGGCCAAAGCCCATGGAGGGAGTGTCCCACCAAATCATTCTCACATGATGAAACGAGAAATCCAAAGCCCAGAAGCCGAAGTAGCCCACGAGTTGGATTGGTTTAGACGCCGACAAAATTCTGGTTTCAATCGCAGTTTGATTGGAATTCGATTTGAGATGGTCTATTTCCCATACTCGATCTCGGTCTGCAAGTCCGTTGACCAACCAACCGTCATGGCGAGTTCAGTGAATTTAGCCGATTCAAGTTCCAAATCAAGGAACAAGAAGATGACTGCCTCATCCACTTGTTCCAAATTCCCTGTTTGTCATCGGTCTCGATCGGCCGTAATCGATATTGTGATTTTGATCGCTGTGGTTGGTGCTTGTGGGTTTTTGTTATTCCCTTATATGAAGCTTGTTATCGTTGAATCCCTCGAGATTTTCGGGGCGATTCTGTATTTAATGGGAGAGGAAGTCTCTCGTGCTCCTTGGATTTATGGATCCATTGGACTTAGCATTTTCTGTGCTTCATTAGCTGCTTGGGTTGTTTTAATATGCACGAGCAGGAAATGTGGGAATCCTTATTGCAAGGGGCTTCGAAAGGCGGCTGAATTCGATATCCAATTGGAGACGGAGGAGTGTGTGAAGAACTCCACTCCATTGGTTAAGAATGGAGTGAAGAAAGGGCTTTTTGAATTGCCCCGTGATCATCACCGCGAATTAGAAGCTGAACTTAAGAAGATGGCACCTCCTAATGGAAGAGCAGTGCTCATTTTCCGAGCAAGATGTGGCTGTTCTGTTGGTAGGTTGGAAGTTCCTGGGCCTAGGAAGCAGCTGAAGAAGATCAAGAAATAG

Coding sequence (CDS)

ATGTGGGCCAAAGCCCATGGAGGGAGTGTCCCACCAAATCATTCTCACATGATGAAACGAGAAATCCAAAGCCCAGAAGCCGAAGTAGCCCACGAGTTGGATTGGTTTAGACGCCGACAAAATTCTGGTTTCAATCGCAGTTTGATTGGAATTCGATTTGAGATGGTCTATTTCCCATACTCGATCTCGGTCTGCAAGTCCGTTGACCAACCAACCGTCATGGCGAGTTCAGTGAATTTAGCCGATTCAAGTTCCAAATCAAGGAACAAGAAGATGACTGCCTCATCCACTTGTTCCAAATTCCCTGTTTGTCATCGGTCTCGATCGGCCGTAATCGATATTGTGATTTTGATCGCTGTGGTTGGTGCTTGTGGGTTTTTGTTATTCCCTTATATGAAGCTTGTTATCGTTGAATCCCTCGAGATTTTCGGGGCGATTCTGTATTTAATGGGAGAGGAAGTCTCTCGTGCTCCTTGGATTTATGGATCCATTGGACTTAGCATTTTCTGTGCTTCATTAGCTGCTTGGGTTGTTTTAATATGCACGAGCAGGAAATGTGGGAATCCTTATTGCAAGGGGCTTCGAAAGGCGGCTGAATTCGATATCCAATTGGAGACGGAGGAGTGTGTGAAGAACTCCACTCCATTGGTTAAGAATGGAGTGAAGAAAGGGCTTTTTGAATTGCCCCGTGATCATCACCGCGAATTAGAAGCTGAACTTAAGAAGATGGCACCTCCTAATGGAAGAGCAGTGCTCATTTTCCGAGCAAGATGTGGCTGTTCTGTTGGTAGGTTGGAAGTTCCTGGGCCTAGGAAGCAGCTGAAGAAGATCAAGAAATAG

Protein sequence

MWAKAHGGSVPPNHSHMMKREIQSPEAEVAHELDWFRRRQNSGFNRSLIGIRFEMVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDIVILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLAAWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHRELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK

Homology

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BLAST of Clc09G19870 vs. NCBI nr
Match: XP_004148702.1 (uncharacterized protein At5g19025 [Cucumis sativus])

HSP 1 Score: 444.5 bits (1142), Expect = 6.7e-121
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 55  MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI 114
           MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI 60

Query: 115 VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 174
           VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 120

Query: 175 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 234
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 180

Query: 235 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 280
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

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BLAST of Clc09G19870 vs. NCBI nr
Match: XP_038889495.1 (uncharacterized protein At5g19025 [Benincasa hispida])

HSP 1 Score: 441.8 bits (1135), Expect = 4.4e-120
Identity = 222/225 (98.67%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 55  MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI 114
           MVYFPYSISVCKSVDQPTVMASSVN+ADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTVMASSVNIADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI 60

Query: 115 VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 174
           VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPW+YGSIGLSIFCASLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWVYGSIGLSIFCASLA 120

Query: 175 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 234
           AWVVLICTSRKCGNP+CKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPFCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 180

Query: 235 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 280
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

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BLAST of Clc09G19870 vs. NCBI nr
Match: XP_008459326.1 (PREDICTED: uncharacterized protein At5g19025 [Cucumis melo] >KAA0039489.1 putative Ribosomal protein L34e superfamily protein [Cucumis melo var. makuwa] >TYK15244.1 putative Ribosomal protein L34e superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 441.0 bits (1133), Expect = 7.4e-120
Identity = 223/225 (99.11%), Postives = 224/225 (99.56%), Query Frame = 0


Query: 55  MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI 114
           MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNK+M ASSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKRMPASSTCSKFPVCHRSRSAVIDI 60

Query: 115 VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 174
           VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 120

Query: 175 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 234
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 180

Query: 235 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 280
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

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BLAST of Clc09G19870 vs. NCBI nr
Match: XP_023551693.1 (uncharacterized protein At5g19025-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 433.7 bits (1114), Expect = 1.2e-117
Identity = 218/225 (96.89%), Postives = 221/225 (98.22%), Query Frame = 0


Query: 55  MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI 114
           MVYFPYSISVCKSVDQPT+MASSVNLADSS KSRNKKMT SSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 60

Query: 115 VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 174
           VILIAVVGACGFLLFPYMKL+IVESLEIFGAILYLMG+EVSRAPWIYGSIGL IFCA LA
Sbjct: 61  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 120

Query: 175 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 234
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 180

Query: 235 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 280
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

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BLAST of Clc09G19870 vs. NCBI nr
Match: XP_022938995.1 (uncharacterized protein At5g19025-like [Cucurbita moschata] >XP_022938997.1 uncharacterized protein At5g19025-like [Cucurbita moschata])

HSP 1 Score: 431.4 bits (1108), Expect = 5.9e-117
Identity = 217/225 (96.44%), Postives = 220/225 (97.78%), Query Frame = 0


Query: 55  MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI 114
           MVYFPYSISVCKSVDQPT MASSVNLADSS KSRNKKMT SSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 60

Query: 115 VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 174
           VILIAVVGACGFLLFPYMKL+IVESLEIFGAILYLMG+EVSRAPWIYGSIGL IFCA LA
Sbjct: 61  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 120

Query: 175 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 234
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTP+VKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 180

Query: 235 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 280
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

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BLAST of Clc09G19870 vs. ExPASy Swiss-Prot
Match: P0C8Q9 (Uncharacterized protein At5g19025 OS=Arabidopsis thaliana OX=3702 GN=At5g19025 PE=2 SV=3)

HSP 1 Score: 102.4 bits (254), Expect = 8.2e-21
Identity = 79/233 (33.91%), Postives = 119/233 (51.07%), Query Frame = 0


Query: 76  SSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDIVILIAVVGACGFLLFPYMKLV 135
           +S  +  SS  + N+     ++ S   +C  S SA +D++ILI V+ +  FLL  Y    
Sbjct: 20  NSTTMPPSSRSAANQ-----NSSSSLHLCKHSPSATLDLLILILVLFSGTFLLSSYFS-Y 79

Query: 136 IVESLEIFGA----------------ILYLMGEEVSR-----------APWIYGSIGLSI 195
           ++ SL +  +                I++   +  +             P        ++
Sbjct: 80  LIHSLSLLSSHFPSITISLSSLLPPLIIFFSSDHSTEDEDHHHPSGKIPPPASFFFAFAV 139

Query: 196 FCASLAAWVVLIC--TSRKCGNPYCKGLRKAAEFDIQLETEECVKN-STPLVKNGVKKGL 255
           F A+  A++ L C   SRKC NP CKG++KA EFD+QL+TEECVK+ S   +     KG 
Sbjct: 140 FFAASIAFLDLCCGSRSRKCRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEIDRLPWKGG 199

Query: 256 FELPRDHHRELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIK 279
            E   D+   L AEL+KMAP NGRAVLIFR++CGC + +LE  GP++  +  K
Sbjct: 200 SESNPDYEC-LRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKK 245

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BLAST of Clc09G19870 vs. ExPASy TrEMBL
Match: A0A0A0KVL2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636590 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 3.3e-121
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 55  MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI 114
           MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI 60

Query: 115 VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 174
           VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 120

Query: 175 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 234
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 180

Query: 235 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 280
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

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BLAST of Clc09G19870 vs. ExPASy TrEMBL
Match: A0A5D3CWE1 (Putative Ribosomal protein L34e superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00180 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 3.6e-120
Identity = 223/225 (99.11%), Postives = 224/225 (99.56%), Query Frame = 0


Query: 55  MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI 114
           MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNK+M ASSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKRMPASSTCSKFPVCHRSRSAVIDI 60

Query: 115 VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 174
           VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 120

Query: 175 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 234
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 180

Query: 235 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 280
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

[Close]

BLAST of Clc09G19870 vs. ExPASy TrEMBL
Match: A0A1S3CAF3 (uncharacterized protein At5g19025 OS=Cucumis melo OX=3656 GN=LOC103498491 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 3.6e-120
Identity = 223/225 (99.11%), Postives = 224/225 (99.56%), Query Frame = 0


Query: 55  MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI 114
           MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNK+M ASSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKRMPASSTCSKFPVCHRSRSAVIDI 60

Query: 115 VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 174
           VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA
Sbjct: 61  VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 120

Query: 175 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 234
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 180

Query: 235 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 280
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

[Close]

BLAST of Clc09G19870 vs. ExPASy TrEMBL
Match: A0A6J1FFK9 (uncharacterized protein At5g19025-like OS=Cucurbita moschata OX=3662 GN=LOC111445040 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.9e-117
Identity = 217/225 (96.44%), Postives = 220/225 (97.78%), Query Frame = 0


Query: 55  MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI 114
           MVYFPYSISVCKSVDQPT MASSVNLADSS KSRNKKMT SSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTTMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 60

Query: 115 VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 174
           VILIAVVGACGFLLFPYMKL+IVESLEIFGAILYLMG+EVSRAPWIYGSIGL IFCA LA
Sbjct: 61  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 120

Query: 175 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 234
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTP+VKNGVKKGLFELPRDHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPVVKNGVKKGLFELPRDHHR 180

Query: 235 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 280
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

[Close]

BLAST of Clc09G19870 vs. ExPASy TrEMBL
Match: A0A6J1K2Z1 (uncharacterized protein At5g19025-like OS=Cucurbita maxima OX=3661 GN=LOC111489591 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.9e-117
Identity = 217/225 (96.44%), Postives = 220/225 (97.78%), Query Frame = 0


Query: 55  MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDI 114
           MVYFPYSISVCKSVDQPT+MASSVNLADSS KSRNKKMT SSTCSKFPVCHRSRSAVIDI
Sbjct: 1   MVYFPYSISVCKSVDQPTIMASSVNLADSSFKSRNKKMTPSSTCSKFPVCHRSRSAVIDI 60

Query: 115 VILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLA 174
           VILIAVVGACGFLLFPYMKL+IVESLEIFGAILYLMG+EVSRAPWIYGSIGL IFCA LA
Sbjct: 61  VILIAVVGACGFLLFPYMKLLIVESLEIFGAILYLMGDEVSRAPWIYGSIGLGIFCALLA 120

Query: 175 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRDHHR 234
           AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELP DHHR
Sbjct: 121 AWVVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPCDHHR 180

Query: 235 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 280
           ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK
Sbjct: 181 ELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 225

[Close]

BLAST of Clc09G19870 vs. TAIR 10
Match: AT3G01170.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 267.7 bits (683), Expect = 1.0e-71
Identity = 142/228 (62.28%), Postives = 176/228 (77.19%), Query Frame = 0


Query: 55  MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSRN--KKMTASSTCSKFPVCHRSRSAVI 114
           MVY   SISVC SVD P +M      + SS KSRN   K ++S TCSKFPVC  S+SA I
Sbjct: 1   MVYLHSSISVCNSVD-PMIM------SHSSPKSRNTRNKSSSSPTCSKFPVCDGSQSAAI 60

Query: 115 DIVILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCAS 174
           D+VILIAV+ ACGFL FPY+KL+ ++S+E+F  +  L+ +E+ + P +YGS+ LSIFCA+
Sbjct: 61  DVVILIAVITACGFLFFPYVKLITLKSIEVFSDLSLLVKQEILQNPIVYGSLALSIFCAA 120

Query: 175 LAAW-VVLICTSRKCGNPYCKGLRKAAEFDIQLETEECVKNSTPLVKNGVKKGLFELPRD 234
           ++ W V+L+CT ++CG P CKGLRKA EFDIQLETEECVK+S+       K+G+FELPR 
Sbjct: 121 ISTWLVILLCTMQRCGKPNCKGLRKAVEFDIQLETEECVKSSSN------KRGMFELPRV 180

Query: 235 HHRELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIKK 280
           HHRELEAELKKMAPPNGRAVL+FRARCGCSV RL V GP+KQ +KIKK
Sbjct: 181 HHRELEAELKKMAPPNGRAVLVFRARCGCSVRRLVVSGPKKQQRKIKK 215

[Close]

BLAST of Clc09G19870 vs. TAIR 10
Match: AT5G15260.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 245.4 bits (625), Expect = 5.6e-65
Identity = 142/238 (59.66%), Postives = 176/238 (73.95%), Query Frame = 0


Query: 55  MVYFPYSISVCKSVDQPTVMASSVNLADSSSKSR----NKKMTASSTCSKFPV-CHRSRS 114
           MVYF  SIS+   VDQ  +MA S +    S +SR    N+K ++SS  S F V C  SRS
Sbjct: 1   MVYFQNSISL---VDQSPIMAHSPDFHHHSKQSRTSSSNRKSSSSSCSSNFSVCCDGSRS 60

Query: 115 AVIDIVILIAVVGACGFLLFPYMKLVIVESLEIFGAILYLMGEEVSR--APWIYGSIGLS 174
           A ID+VILIAV+ + GFL+FPY+K + ++S+EIF  +  L+ EE+ R   P +YG I LS
Sbjct: 61  AAIDVVILIAVITSSGFLIFPYIKFITIKSVEIFSELSCLVKEEILRNPDPIVYGLIALS 120

Query: 175 IFCASLAAW--VVLICTSRKCGNPYCKGLRKA-AEFDIQLETEECVKNSTPLVKNGVKKG 234
           I C +L+AW  V+L+C+  +CG P CKGLRKA AEFDIQLETE+CVK+S    K+  KKG
Sbjct: 121 ISCTALSAWMIVILLCSRHRCGKPNCKGLRKANAEFDIQLETEDCVKSSNS-GKSVSKKG 180

Query: 235 LFELPRDHHRELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRK---QLKKIKK 280
           LFELPRDHHRELEAELKKMAPPNGRAVL+FRA+CGCSVGRLEVPGP+K   Q +K+KK
Sbjct: 181 LFELPRDHHRELEAELKKMAPPNGRAVLVFRAKCGCSVGRLEVPGPKKQQLQQRKVKK 234

[Close]

BLAST of Clc09G19870 vs. TAIR 10
Match: AT3G06180.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 125.2 bits (313), Expect = 8.4e-29
Identity = 83/206 (40.29%), Postives = 121/206 (58.74%), Query Frame = 0


Query: 79  NLADSSSKSR---NKKMTASSTCSKFPVCHRSRSAVIDIVILIAVVGACGFLLFPYMKL- 138
           ++  SSS SR   N   ++SS+ S   +C  S SA +D++ILI V+ +  FLL  Y    
Sbjct: 17  SMPPSSSASRSASNHSSSSSSSSSSLHLCKHSPSATLDLLILILVLFSGAFLLSSYFSYL 76

Query: 139 -----VIVESLEIFGAILYLMGEEVSRAPWIYGSIGLSIFCASLAAWVVLIC--TSRKCG 198
                ++        ++++   E++S  P        ++F A+  A++ L C   SRKC 
Sbjct: 77  FHSFSLLSSHFPSLSSLIFSDDEDLSSIPPASYFFAFAVFFAASIAFLDLCCGPRSRKCR 136

Query: 199 NPYCKGLRKAAEFDIQLETEECVKN-STPLVKNGVKKGLFELPRDHHRELEAELKKMAPP 258
           NP CKGL+KA EFD+QL+TEECVK+ +T  +     KG  E   D+   L AEL++MAPP
Sbjct: 137 NPKCKGLKKAMEFDLQLQTEECVKSGATKEIDRLPWKGGSESNPDYEC-LRAELRRMAPP 196

Query: 259 NGRAVLIFRARCGCSVGRLEVPGPRK 273
           NGRAVL+FR+RCGC V +LE  GP++
Sbjct: 197 NGRAVLLFRSRCGCPVAKLEGWGPKR 221

[Close]

BLAST of Clc09G19870 vs. TAIR 10
Match: AT5G19025.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 102.4 bits (254), Expect = 5.8e-22
Identity = 79/233 (33.91%), Postives = 119/233 (51.07%), Query Frame = 0


Query: 76  SSVNLADSSSKSRNKKMTASSTCSKFPVCHRSRSAVIDIVILIAVVGACGFLLFPYMKLV 135
           +S  +  SS  + N+     ++ S   +C  S SA +D++ILI V+ +  FLL  Y    
Sbjct: 20  NSTTMPPSSRSAANQ-----NSSSSLHLCKHSPSATLDLLILILVLFSGTFLLSSYFS-Y 79

Query: 136 IVESLEIFGA----------------ILYLMGEEVSR-----------APWIYGSIGLSI 195
           ++ SL +  +                I++   +  +             P        ++
Sbjct: 80  LIHSLSLLSSHFPSITISLSSLLPPLIIFFSSDHSTEDEDHHHPSGKIPPPASFFFAFAV 139

Query: 196 FCASLAAWVVLIC--TSRKCGNPYCKGLRKAAEFDIQLETEECVKN-STPLVKNGVKKGL 255
           F A+  A++ L C   SRKC NP CKG++KA EFD+QL+TEECVK+ S   +     KG 
Sbjct: 140 FFAASIAFLDLCCGSRSRKCRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEIDRLPWKGG 199

Query: 256 FELPRDHHRELEAELKKMAPPNGRAVLIFRARCGCSVGRLEVPGPRKQLKKIK 279
            E   D+   L AEL+KMAP NGRAVLIFR++CGC + +LE  GP++  +  K
Sbjct: 200 SESNPDYEC-LRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKK 245

The following BLAST results are available for this feature:

BLAST of Clc09G19870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148702.1	6.7e-121	100.00	uncharacterized protein At5g19025 [Cucumis sativus]	[more]
XP_038889495.1	4.4e-120	98.67	uncharacterized protein At5g19025 [Benincasa hispida]	[more]
XP_008459326.1	7.4e-120	99.11	PREDICTED: uncharacterized protein At5g19025 [Cucumis melo] >KAA0039489.1 putati...	[more]
XP_023551693.1	1.2e-117	96.89	uncharacterized protein At5g19025-like [Cucurbita pepo subsp. pepo]	[more]
XP_022938995.1	5.9e-117	96.44	uncharacterized protein At5g19025-like [Cucurbita moschata] >XP_022938997.1 unch...	[more]

BLAST of Clc09G19870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C8Q9	8.2e-21	33.91	Uncharacterized protein At5g19025 OS=Arabidopsis thaliana OX=3702 GN=At5g19025 P...	[more]

BLAST of Clc09G19870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVL2	3.3e-121	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636590 PE=4 SV=1	[more]
A0A5D3CWE1	3.6e-120	99.11	Putative Ribosomal protein L34e superfamily protein OS=Cucumis melo var. makuwa ...	[more]
A0A1S3CAF3	3.6e-120	99.11	uncharacterized protein At5g19025 OS=Cucumis melo OX=3656 GN=LOC103498491 PE=4 S...	[more]
A0A6J1FFK9	2.9e-117	96.44	uncharacterized protein At5g19025-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1K2Z1	4.9e-117	96.44	uncharacterized protein At5g19025-like OS=Cucurbita maxima OX=3661 GN=LOC1114895...	[more]

BLAST of Clc09G19870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01170.1	1.0e-71	62.28	Ribosomal protein L34e superfamily protein	[more]
AT5G15260.1	5.6e-65	59.66	Ribosomal protein L34e superfamily protein	[more]
AT3G06180.1	8.4e-29	40.29	Ribosomal protein L34e superfamily protein	[more]
AT5G19025.1	5.8e-22	33.91	Ribosomal protein L34e superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR46996:SF4	BNAC09G54710D PROTEIN	coord: 55..279
None	No IPR available	PANTHER	PTHR46996	OS05G0488500 PROTEIN	coord: 55..279

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G19870.2	Clc09G19870.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane