Clc09G17780 (gene) Watermelon (cordophanus) v2

Overview
NameClc09G17780
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationClcChr09: 29506234 .. 29510280 (-)
RNA-Seq ExpressionClc09G17780
SyntenyClc09G17780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGATAACCATTTTTGGGCCAAATTTCAGAGAGTATCCGTGCAAATTTTCTAGTGAAAAAAGATTGCTACGCAAGTGTCGGACAGCTTACAAACTAGTCGCCGATTCAAAAGTAAGCAAATCGGAGATCGGCTCACCAACTGAAGGATCCATTTCCATGGCTTCTCGCACTCTCTTCCTCGCCTTTAGCCGGTAAATATCATTCTTCCTTTTCCTTCTTTTTTTCTTTTTTTTTTTCCGTGCAATTTCATTCTCCGTTTGGTTGCTGGGAAGATGGAGCAGTGTTTGATTCCAAACTTAGTCTTTCATTGAAAGGAATCTCAATTCTGAAACCGAATCTTCTGTTCCATCAGGAACCGATTGCCGCAATTTTCAATGGGGTTGGGGTTGTTTTACCTCCTTCATTATTTGAGGATTTTGTGTATTTTGATCTGAACCCTAGAAAATTCAGGAACAGAAGCTTCTTAAATCAAAGTTTCAAAGCGATCCCGGTCTTCAATGAAGCTAGTGTTTCGAACTATTGCTCTCATGGAGCTCTGAGGAGTGAATGTTTTGATGAATCAGTGAATTCTGAAGAAACCAATGACTTGAAGAGCAGAATATTTCGGCTCAGATTGCCTAAGCGAAGTGCCACCAACGTTCTTCAGAGATGGACGAGTGAGGGAAACCAAGTTACAATCACTGAGCTACGGACAATCTCCAAAGAGCTTAGAAGGATTCAGCGGTATAAGCACGCTCTCGAGGTACTGATTTATTTGTTTTCTTCTTTCTTCTTACAGTCTTCTGTTTTCAGATGTTAAATGGCAGTTCCAATGGAAGAGACAAGTTTTGTTTGGTTCTTTAAAGTGCTGTTGCGGCAACTCTCAAAGAGATCAAATTAAATGTGCACCCTTATGTATATAAACACGAATATAAGTGAAAGTAGACAAATGCTTCAAAAAATTTCAGCTAAATAAGAAATCCTGGAGAAGAGTGTAAACTGGCATCTAAAACCTAATTCAAAGGAAATGTGAAATGTAACTAATGTACTCGTGATCTGTATAAGTGTTGAAGGAGCTTGCATTTGTAGTCCTTAGTTATAGTCTAGTTGGTCAAGCCTTCTAGAGTGAAGTATACTCTCTAATTCTAACCTTATTTTTAATATTAGAACAAGAAGATTTGTGTCTGCAGATCAAGATGTTTGAGCCTTCAAATCAAACATATAGAGTTTGATGCAATCCATACAAATATTCATGTAATTCGCACAAGGATCCTTTGTTAGGTGGTTCCTTTTGCTCAAAACCTTTGGCCTTCAGTATTGTCCCAATACAACTAAAGATGTCCTGAAAACAAGTCATGCCATGAATTCCTTTCAGAGAGTAGAAAGAAAGAAAAGGGAACTATTTGGTCGGATCAATGCTGTGTCAAGAATGATAACTTTTGGGTGAGGGTTGCTGTATTAGCTTCTGAATGGAGCTGTCTTTGTGAAAACCTTTTTAATTTTTTTTTCTTTATGTTATTGATGCTATTGAGATGCTTTTATGTTAGCTTCTAGGGCATTTTTTAGTTTGTCCTACCTTTTGTACACTTGCATTATTAATAATGTTTCTTTTCAACACACGTTTTGTTGATGAACATGAAATTAGAGACAAGATGATGAAAGAAAACACCTAGTTGATTGAGTGCAGTAAGGATGCTTCTAAACTCAGTCTTACTTTGTAGGCGTTCGAGTTTCTCATCAAATTGTCTATCATTATCAATGAAAGCATGAAACTGTGGGCAGAAAGATTTGGCTTCAGATATGTCTTTGAGAGAGAATCTGAGTAACCATATATATCAGAAAAACTTAAATTGTTTTGAAAGCTTGATAATGATAGAGTTGGGGCTGGTCCCTTACTTTGAATGGTTTAGCTGCTAAATGACCAGATGAAGGAGAAGAGGTTTATGCAATTTGCTTCCTCGACATGCTTAGACAAAGTTTATGATGGGAATGATATTGGTAAATAGTTAGAGCATTAAGGGCATATTAGCAATTAGTAATGAGTTTGTTAGGAAAATTTGGTTATAATTAGAGGTTAGGAGAATGAGGAAGGCTGACAATATTTTTGGAGTATGAATTAGGGCTTGAGAGTATCTTAAGATTGAGAGGGTTCAAGTACTTTGAATACTTGGTTTATTTTGTAATTCGTTATCATTTATCTTTAAATATATTTGGGTTTTATCATTTTATACTTTATTTTACTCTTTCTAAAGAGTGCCCAGAGCTGAGAGAAAGGACCCCAGTGCATAAGGGGAGGGATGGCCAATATGTGGTCGTGATGGATTTGCTGAGTTGGCACTGTTAACATGGGGCAAAATTAGGAGTTGATACACTATTGCTAGACAAATTACTGGGACCATAGTGTCTAGATTTTGGAGAGCGTAGACAATATAGTGTTGATAGCTATGGATTTTACATCACGTCTTAGTCTCAAAGTGATATGACCCATCCTTTGCCTTACAACAGTGCTACCCACTATCTTAGTCTTTTATGCAACATAAAGAAGAGAGAAGTTCAACAACTGATATACATTACTCCACAAATGCTTTATAAGGAGATGAATGCAAAAGGTATATTTATGGTCAATATGAGAAATAGAAAGTTGTGATGCATAAAAATGTTTTGTTGAGAAGAAATGGAGTAATTTTCCTTTTTGGAGTCTTCCGTAATCCTTACAAAATGTAATTCACGTACTCTGAGAGTCCAATCAAATGGTTTCCCTTTAAAGAATGCTCAGCTGCATAGGAAGAAGGGTCAAGTTGCATTGTACTACAAGTGAAATTGAATTTTATGTTTGCTAAAATCTTTCTTATTTCTCACTTGAAAAAAGATGATAAGGAAATGGCTAGAAGGATCACCATAGTTTTGTTTGGCTCATAATCTGAAGAACACCGATCAGGGGATTTTATGTCATCTTCTCTATTTACAATGAACTGACAATCTGTCAACATTACATGTTTTCCACATAATTCACTGCCAATACTCTTTTCTTGCTTGCAGATTTTAGAATGGATGGTAACTCATAATGAGTTTGAGTTATCTGATTCCGACTTTGCAATCCGCATTGACTTGATGACCAAAGTATTTGGTGTCGATGCTGCTGACCGATACTTTGAAGGTCTGCCTATTGGTGCCAAAACTTGTGAGACTTATACTGCTCTCCTTCACTCTTTTGCTGGGTCCAAATTGACTGAAAAGGCTGAAACTCTTTATGAAAAAATAAAGGAGTCAAATATACCTCTCACTGCTCTTCCATTCAACGAGATGATGACGTTGTACATGTCGGTCGGGCAAGTAGAAAAGGTATCCTCAATTGTAGATGACCTGAAACAAAGAATGGTTCATCCTGACATTTTCACTTATAATCTCTGGATCAGCTCTCTAGCTGCCGCTTTGAATATTGATGGTGTTGGACAGATTCTCAGCGAGATGAATCATAACCCCAATTCAAACAAAGATTGGGTGCGATATATTGATCTCGTCAACATATACATTAAGTCAGCTCATCTATTACATTCAGAGTCGAACTCCATAGTTGAGTCTGAGAGTGGCATTTCTCAGCGAGAATGGATTACGTATGACCTCCTCATTATCTTGTATGCTGGTCTAGGAAACAAGGACAAAATTGATCAGATTTGGAGATCATTAAGGATGACAAAGCAAAAAATGACAAGCAGGAATTACATTTGCGTTCTATCTTGTTACCTGATGCTTGATCATTTGAAGGAGATTGGTGAAATTATTGATCAGTGGAAACAATCAACTACAACAGATTTTGATGTTTCTGTTTGTAAAAGGCTTGTAAATGCATTTGTTGAAGCTGGCTTGAATGAGAAAGCCAACAGTTTTGTTACCCTTTTGATTCAAAAGAACTGTGAATCCACAGAAGCATAGTGGTAGAAAATAGGTTTAAATCCTAATTTGTCTTATCTCATTATGATTTCATGAAGTTTCAAATATTTTGTTTTTAATTTTTCAAATTTCAGATGTTGCCTTAGTCTTAAGATTTTGTATAAAATATTGTTTCAG

mRNA sequence

CCGATAACCATTTTTGGGCCAAATTTCAGAGAGTATCCGTGCAAATTTTCTAGTGAAAAAAGATTGCTACGCAAGTGTCGGACAGCTTACAAACTAGTCGCCGATTCAAAAGTAAGCAAATCGGAGATCGGCTCACCAACTGAAGGATCCATTTCCATGGCTTCTCGCACTCTCTTCCTCGCCTTTAGCCGTCTTTCATTGAAAGGAATCTCAATTCTGAAACCGAATCTTCTGTTCCATCAGGAACCGATTGCCGCAATTTTCAATGGGGTTGGGGTTGTTTTACCTCCTTCATTATTTGAGGATTTTGTGTATTTTGATCTGAACCCTAGAAAATTCAGGAACAGAAGCTTCTTAAATCAAAGTTTCAAAGCGATCCCGGTCTTCAATGAAGCTAGTGTTTCGAACTATTGCTCTCATGGAGCTCTGAGGAGTGAATGTTTTGATGAATCAGTGAATTCTGAAGAAACCAATGACTTGAAGAGCAGAATATTTCGGCTCAGATTGCCTAAGCGAAGTGCCACCAACGTTCTTCAGAGATGGACGAGTGAGGGAAACCAAGTTACAATCACTGAGCTACGGACAATCTCCAAAGAGCTTAGAAGGATTCAGCGGTATAAGCACGCTCTCGAGATTTTAGAATGGATGGTAACTCATAATGAGTTTGAGTTATCTGATTCCGACTTTGCAATCCGCATTGACTTGATGACCAAAGTATTTGGTGTCGATGCTGCTGACCGATACTTTGAAGGTCTGCCTATTGGTGCCAAAACTTGTGAGACTTATACTGCTCTCCTTCACTCTTTTGCTGGGTCCAAATTGACTGAAAAGGCTGAAACTCTTTATGAAAAAATAAAGGAGTCAAATATACCTCTCACTGCTCTTCCATTCAACGAGATGATGACGTTGTACATGTCGGTCGGGCAAGTAGAAAAGGTATCCTCAATTGTAGATGACCTGAAACAAAGAATGGTTCATCCTGACATTTTCACTTATAATCTCTGGATCAGCTCTCTAGCTGCCGCTTTGAATATTGATGGTGTTGGACAGATTCTCAGCGAGATGAATCATAACCCCAATTCAAACAAAGATTGGGTGCGATATATTGATCTCGTCAACATATACATTAAGTCAGCTCATCTATTACATTCAGAGTCGAACTCCATAGTTGAGTCTGAGAGTGGCATTTCTCAGCGAGAATGGATTACGTATGACCTCCTCATTATCTTGTATGCTGGTCTAGGAAACAAGGACAAAATTGATCAGATTTGGAGATCATTAAGGATGACAAAGCAAAAAATGACAAGCAGGAATTACATTTGCGTTCTATCTTGTTACCTGATGCTTGATCATTTGAAGGAGATTGGTGAAATTATTGATCAGTGGAAACAATCAACTACAACAGATTTTGATGTTTCTGTTTGTAAAAGGCTTGTAAATGCATTTGTTGAAGCTGGCTTGAATGAGAAAGCCAACAGTTTTGTTACCCTTTTGATTCAAAAGAACTGTGAATCCACAGAAGCATAGTGGTAGAAAATAGGTTTAAATCCTAATTTGTCTTATCTCATTATGATTTCATGAAGTTTCAAATATTTTGTTTTTAATTTTTCAAATTTCAGATGTTGCCTTAGTCTTAAGATTTTGTATAAAATATTGTTTCAG

Coding sequence (CDS)

ATGGCTTCTCGCACTCTCTTCCTCGCCTTTAGCCGTCTTTCATTGAAAGGAATCTCAATTCTGAAACCGAATCTTCTGTTCCATCAGGAACCGATTGCCGCAATTTTCAATGGGGTTGGGGTTGTTTTACCTCCTTCATTATTTGAGGATTTTGTGTATTTTGATCTGAACCCTAGAAAATTCAGGAACAGAAGCTTCTTAAATCAAAGTTTCAAAGCGATCCCGGTCTTCAATGAAGCTAGTGTTTCGAACTATTGCTCTCATGGAGCTCTGAGGAGTGAATGTTTTGATGAATCAGTGAATTCTGAAGAAACCAATGACTTGAAGAGCAGAATATTTCGGCTCAGATTGCCTAAGCGAAGTGCCACCAACGTTCTTCAGAGATGGACGAGTGAGGGAAACCAAGTTACAATCACTGAGCTACGGACAATCTCCAAAGAGCTTAGAAGGATTCAGCGGTATAAGCACGCTCTCGAGATTTTAGAATGGATGGTAACTCATAATGAGTTTGAGTTATCTGATTCCGACTTTGCAATCCGCATTGACTTGATGACCAAAGTATTTGGTGTCGATGCTGCTGACCGATACTTTGAAGGTCTGCCTATTGGTGCCAAAACTTGTGAGACTTATACTGCTCTCCTTCACTCTTTTGCTGGGTCCAAATTGACTGAAAAGGCTGAAACTCTTTATGAAAAAATAAAGGAGTCAAATATACCTCTCACTGCTCTTCCATTCAACGAGATGATGACGTTGTACATGTCGGTCGGGCAAGTAGAAAAGGTATCCTCAATTGTAGATGACCTGAAACAAAGAATGGTTCATCCTGACATTTTCACTTATAATCTCTGGATCAGCTCTCTAGCTGCCGCTTTGAATATTGATGGTGTTGGACAGATTCTCAGCGAGATGAATCATAACCCCAATTCAAACAAAGATTGGGTGCGATATATTGATCTCGTCAACATATACATTAAGTCAGCTCATCTATTACATTCAGAGTCGAACTCCATAGTTGAGTCTGAGAGTGGCATTTCTCAGCGAGAATGGATTACGTATGACCTCCTCATTATCTTGTATGCTGGTCTAGGAAACAAGGACAAAATTGATCAGATTTGGAGATCATTAAGGATGACAAAGCAAAAAATGACAAGCAGGAATTACATTTGCGTTCTATCTTGTTACCTGATGCTTGATCATTTGAAGGAGATTGGTGAAATTATTGATCAGTGGAAACAATCAACTACAACAGATTTTGATGTTTCTGTTTGTAAAAGGCTTGTAAATGCATTTGTTGAAGCTGGCTTGAATGAGAAAGCCAACAGTTTTGTTACCCTTTTGATTCAAAAGAACTGTGAATCCACAGAAGCATAG

Protein sequence

MASRTLFLAFSRLSLKGISILKPNLLFHQEPIAAIFNGVGVVLPPSLFEDFVYFDLNPRKFRNRSFLNQSFKAIPVFNEASVSNYCSHGALRSECFDESVNSEETNDLKSRIFRLRLPKRSATNVLQRWTSEGNQVTITELRTISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIRIDLMTKVFGVDAADRYFEGLPIGAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVGQILSEMNHNPNSNKDWVRYIDLVNIYIKSAHLLHSESNSIVESESGISQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICVLSCYLMLDHLKEIGEIIDQWKQSTTTDFDVSVCKRLVNAFVEAGLNEKANSFVTLLIQKNCESTEA
Homology
[Close]
BLAST of Clc09G17780 vs. NCBI nr
Match: XP_038888933.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 730.3 bits (1884), Expect = 1.0e-206
Identity = 362/398 (90.95%), Postives = 378/398 (94.97%), Query Frame = 0 

Query: 59  RKFRNRSFLNQSFKAIPVFNEASVSNYCSHGALRSECFDESVNSEETNDLKSRIFRLRLP 118
           R FRNR FLNQ+FKAIPVF+E SVSNYCSHGALRSE FDESVNSEETNDLKSRIFRLRLP
Sbjct: 12  RNFRNRGFLNQNFKAIPVFSEVSVSNYCSHGALRSESFDESVNSEETNDLKSRIFRLRLP 71

Query: 119 KRSATNVLQRWTSEGNQVTITELRTISKELRRIQRYKHALEILEWMVTHNEFELSDSDFA 178
           KRSATNVLQRW SEGNQVTITELR ISKELRRIQRYKHALEILEWMVTHNEFELSDSDFA
Sbjct: 72  KRSATNVLQRWMSEGNQVTITELRNISKELRRIQRYKHALEILEWMVTHNEFELSDSDFA 131

Query: 179 IRIDLMTKVFGVDAADRYFEGLPIGAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNI 238
           IRIDLMTKVFG+DAA+RYFEGLP  +KTCETYTALLHSFAGSKLTEKAE+LY KI E +I
Sbjct: 132 IRIDLMTKVFGIDAAERYFEGLPTDSKTCETYTALLHSFAGSKLTEKAESLYAKIMELDI 191

Query: 239 PLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVGQ 298
           PLTALPFNEMMTLYMSVGQVEKVSSI+DDLKQRMVHPDIFTYNLWISSLA ALNIDGV Q
Sbjct: 192 PLTALPFNEMMTLYMSVGQVEKVSSIIDDLKQRMVHPDIFTYNLWISSLAGALNIDGVRQ 251

Query: 299 ILSEMNHNPNSNKDWVRYIDLVNIYIKSAHLLHSESNSIVESESGISQREWITYDLLIIL 358
           IL+EMN  PNSN+DWVRYIDLVNIY+KSAHLLHS  NS+VESESGISQREWITYDLLIIL
Sbjct: 252 ILNEMNQKPNSNEDWVRYIDLVNIYVKSAHLLHSGLNSLVESESGISQREWITYDLLIIL 311

Query: 359 YAGLGNKDKIDQIWRSLRMTKQKMTSRNYICVLSCYLMLDHLKEIGEIIDQWKQSTTTDF 418
           YAGLGNKDKIDQIWRSL+MTKQKMTSRNYIC+LSCYLMLDHLKEIGE+IDQWKQSTTTDF
Sbjct: 312 YAGLGNKDKIDQIWRSLKMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDF 371

Query: 419 DVSVCKRLVNAFVEAGLNEKANSFVTLLIQKNCESTEA 457
           DVS C RLVNAFVEAGLNEKAN+FVTLLIQKNCE TEA
Sbjct: 372 DVSACNRLVNAFVEAGLNEKANNFVTLLIQKNCEPTEA 409

[Close]
BLAST of Clc09G17780 vs. NCBI nr
Match: XP_038888936.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X4 [Benincasa hispida])

HSP 1 Score: 728.0 bits (1878), Expect = 5.0e-206
Identity = 361/396 (91.16%), Postives = 377/396 (95.20%), Query Frame = 0 

Query: 61  FRNRSFLNQSFKAIPVFNEASVSNYCSHGALRSECFDESVNSEETNDLKSRIFRLRLPKR 120
           FRNR FLNQ+FKAIPVF+E SVSNYCSHGALRSE FDESVNSEETNDLKSRIFRLRLPKR
Sbjct: 4   FRNRGFLNQNFKAIPVFSEVSVSNYCSHGALRSESFDESVNSEETNDLKSRIFRLRLPKR 63

Query: 121 SATNVLQRWTSEGNQVTITELRTISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIR 180
           SATNVLQRW SEGNQVTITELR ISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIR
Sbjct: 64  SATNVLQRWMSEGNQVTITELRNISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIR 123

Query: 181 IDLMTKVFGVDAADRYFEGLPIGAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPL 240
           IDLMTKVFG+DAA+RYFEGLP  +KTCETYTALLHSFAGSKLTEKAE+LY KI E +IPL
Sbjct: 124 IDLMTKVFGIDAAERYFEGLPTDSKTCETYTALLHSFAGSKLTEKAESLYAKIMELDIPL 183

Query: 241 TALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVGQIL 300
           TALPFNEMMTLYMSVGQVEKVSSI+DDLKQRMVHPDIFTYNLWISSLA ALNIDGV QIL
Sbjct: 184 TALPFNEMMTLYMSVGQVEKVSSIIDDLKQRMVHPDIFTYNLWISSLAGALNIDGVRQIL 243

Query: 301 SEMNHNPNSNKDWVRYIDLVNIYIKSAHLLHSESNSIVESESGISQREWITYDLLIILYA 360
           +EMN  PNSN+DWVRYIDLVNIY+KSAHLLHS  NS+VESESGISQREWITYDLLIILYA
Sbjct: 244 NEMNQKPNSNEDWVRYIDLVNIYVKSAHLLHSGLNSLVESESGISQREWITYDLLIILYA 303

Query: 361 GLGNKDKIDQIWRSLRMTKQKMTSRNYICVLSCYLMLDHLKEIGEIIDQWKQSTTTDFDV 420
           GLGNKDKIDQIWRSL+MTKQKMTSRNYIC+LSCYLMLDHLKEIGE+IDQWKQSTTTDFDV
Sbjct: 304 GLGNKDKIDQIWRSLKMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDV 363

Query: 421 SVCKRLVNAFVEAGLNEKANSFVTLLIQKNCESTEA 457
           S C RLVNAFVEAGLNEKAN+FVTLLIQKNCE TEA
Sbjct: 364 SACNRLVNAFVEAGLNEKANNFVTLLIQKNCEPTEA 399

[Close]
BLAST of Clc09G17780 vs. NCBI nr
Match: XP_038888934.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 726.1 bits (1873), Expect = 1.9e-205
Identity = 360/395 (91.14%), Postives = 376/395 (95.19%), Query Frame = 0 

Query: 62  RNRSFLNQSFKAIPVFNEASVSNYCSHGALRSECFDESVNSEETNDLKSRIFRLRLPKRS 121
           RNR FLNQ+FKAIPVF+E SVSNYCSHGALRSE FDESVNSEETNDLKSRIFRLRLPKRS
Sbjct: 12  RNRGFLNQNFKAIPVFSEVSVSNYCSHGALRSESFDESVNSEETNDLKSRIFRLRLPKRS 71

Query: 122 ATNVLQRWTSEGNQVTITELRTISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIRI 181
           ATNVLQRW SEGNQVTITELR ISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIRI
Sbjct: 72  ATNVLQRWMSEGNQVTITELRNISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIRI 131

Query: 182 DLMTKVFGVDAADRYFEGLPIGAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLT 241
           DLMTKVFG+DAA+RYFEGLP  +KTCETYTALLHSFAGSKLTEKAE+LY KI E +IPLT
Sbjct: 132 DLMTKVFGIDAAERYFEGLPTDSKTCETYTALLHSFAGSKLTEKAESLYAKIMELDIPLT 191

Query: 242 ALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVGQILS 301
           ALPFNEMMTLYMSVGQVEKVSSI+DDLKQRMVHPDIFTYNLWISSLA ALNIDGV QIL+
Sbjct: 192 ALPFNEMMTLYMSVGQVEKVSSIIDDLKQRMVHPDIFTYNLWISSLAGALNIDGVRQILN 251

Query: 302 EMNHNPNSNKDWVRYIDLVNIYIKSAHLLHSESNSIVESESGISQREWITYDLLIILYAG 361
           EMN  PNSN+DWVRYIDLVNIY+KSAHLLHS  NS+VESESGISQREWITYDLLIILYAG
Sbjct: 252 EMNQKPNSNEDWVRYIDLVNIYVKSAHLLHSGLNSLVESESGISQREWITYDLLIILYAG 311

Query: 362 LGNKDKIDQIWRSLRMTKQKMTSRNYICVLSCYLMLDHLKEIGEIIDQWKQSTTTDFDVS 421
           LGNKDKIDQIWRSL+MTKQKMTSRNYIC+LSCYLMLDHLKEIGE+IDQWKQSTTTDFDVS
Sbjct: 312 LGNKDKIDQIWRSLKMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVS 371

Query: 422 VCKRLVNAFVEAGLNEKANSFVTLLIQKNCESTEA 457
            C RLVNAFVEAGLNEKAN+FVTLLIQKNCE TEA
Sbjct: 372 ACNRLVNAFVEAGLNEKANNFVTLLIQKNCEPTEA 406

[Close]
BLAST of Clc09G17780 vs. NCBI nr
Match: XP_038888937.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X5 [Benincasa hispida])

HSP 1 Score: 724.2 bits (1868), Expect = 7.2e-205
Identity = 359/394 (91.12%), Postives = 375/394 (95.18%), Query Frame = 0 

Query: 63  NRSFLNQSFKAIPVFNEASVSNYCSHGALRSECFDESVNSEETNDLKSRIFRLRLPKRSA 122
           NR FLNQ+FKAIPVF+E SVSNYCSHGALRSE FDESVNSEETNDLKSRIFRLRLPKRSA
Sbjct: 3   NRGFLNQNFKAIPVFSEVSVSNYCSHGALRSESFDESVNSEETNDLKSRIFRLRLPKRSA 62

Query: 123 TNVLQRWTSEGNQVTITELRTISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIRID 182
           TNVLQRW SEGNQVTITELR ISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIRID
Sbjct: 63  TNVLQRWMSEGNQVTITELRNISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIRID 122

Query: 183 LMTKVFGVDAADRYFEGLPIGAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTA 242
           LMTKVFG+DAA+RYFEGLP  +KTCETYTALLHSFAGSKLTEKAE+LY KI E +IPLTA
Sbjct: 123 LMTKVFGIDAAERYFEGLPTDSKTCETYTALLHSFAGSKLTEKAESLYAKIMELDIPLTA 182

Query: 243 LPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVGQILSE 302
           LPFNEMMTLYMSVGQVEKVSSI+DDLKQRMVHPDIFTYNLWISSLA ALNIDGV QIL+E
Sbjct: 183 LPFNEMMTLYMSVGQVEKVSSIIDDLKQRMVHPDIFTYNLWISSLAGALNIDGVRQILNE 242

Query: 303 MNHNPNSNKDWVRYIDLVNIYIKSAHLLHSESNSIVESESGISQREWITYDLLIILYAGL 362
           MN  PNSN+DWVRYIDLVNIY+KSAHLLHS  NS+VESESGISQREWITYDLLIILYAGL
Sbjct: 243 MNQKPNSNEDWVRYIDLVNIYVKSAHLLHSGLNSLVESESGISQREWITYDLLIILYAGL 302

Query: 363 GNKDKIDQIWRSLRMTKQKMTSRNYICVLSCYLMLDHLKEIGEIIDQWKQSTTTDFDVSV 422
           GNKDKIDQIWRSL+MTKQKMTSRNYIC+LSCYLMLDHLKEIGE+IDQWKQSTTTDFDVS 
Sbjct: 303 GNKDKIDQIWRSLKMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSA 362

Query: 423 CKRLVNAFVEAGLNEKANSFVTLLIQKNCESTEA 457
           C RLVNAFVEAGLNEKAN+FVTLLIQKNCE TEA
Sbjct: 363 CNRLVNAFVEAGLNEKANNFVTLLIQKNCEPTEA 396

[Close]
BLAST of Clc09G17780 vs. NCBI nr
Match: XP_038888935.1 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X3 [Benincasa hispida])

HSP 1 Score: 722.2 bits (1863), Expect = 2.7e-204
Identity = 358/394 (90.86%), Postives = 375/394 (95.18%), Query Frame = 0 

Query: 63  NRSFLNQSFKAIPVFNEASVSNYCSHGALRSECFDESVNSEETNDLKSRIFRLRLPKRSA 122
           +R FLNQ+FKAIPVF+E SVSNYCSHGALRSE FDESVNSEETNDLKSRIFRLRLPKRSA
Sbjct: 11  SRGFLNQNFKAIPVFSEVSVSNYCSHGALRSESFDESVNSEETNDLKSRIFRLRLPKRSA 70

Query: 123 TNVLQRWTSEGNQVTITELRTISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIRID 182
           TNVLQRW SEGNQVTITELR ISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIRID
Sbjct: 71  TNVLQRWMSEGNQVTITELRNISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIRID 130

Query: 183 LMTKVFGVDAADRYFEGLPIGAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTA 242
           LMTKVFG+DAA+RYFEGLP  +KTCETYTALLHSFAGSKLTEKAE+LY KI E +IPLTA
Sbjct: 131 LMTKVFGIDAAERYFEGLPTDSKTCETYTALLHSFAGSKLTEKAESLYAKIMELDIPLTA 190

Query: 243 LPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVGQILSE 302
           LPFNEMMTLYMSVGQVEKVSSI+DDLKQRMVHPDIFTYNLWISSLA ALNIDGV QIL+E
Sbjct: 191 LPFNEMMTLYMSVGQVEKVSSIIDDLKQRMVHPDIFTYNLWISSLAGALNIDGVRQILNE 250

Query: 303 MNHNPNSNKDWVRYIDLVNIYIKSAHLLHSESNSIVESESGISQREWITYDLLIILYAGL 362
           MN  PNSN+DWVRYIDLVNIY+KSAHLLHS  NS+VESESGISQREWITYDLLIILYAGL
Sbjct: 251 MNQKPNSNEDWVRYIDLVNIYVKSAHLLHSGLNSLVESESGISQREWITYDLLIILYAGL 310

Query: 363 GNKDKIDQIWRSLRMTKQKMTSRNYICVLSCYLMLDHLKEIGEIIDQWKQSTTTDFDVSV 422
           GNKDKIDQIWRSL+MTKQKMTSRNYIC+LSCYLMLDHLKEIGE+IDQWKQSTTTDFDVS 
Sbjct: 311 GNKDKIDQIWRSLKMTKQKMTSRNYICILSCYLMLDHLKEIGEVIDQWKQSTTTDFDVSA 370

Query: 423 CKRLVNAFVEAGLNEKANSFVTLLIQKNCESTEA 457
           C RLVNAFVEAGLNEKAN+FVTLLIQKNCE TEA
Sbjct: 371 CNRLVNAFVEAGLNEKANNFVTLLIQKNCEPTEA 404

[Close]
BLAST of Clc09G17780 vs. ExPASy Swiss-Prot
Match: Q94B59 (Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g09450 PE=1 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.7e-124
Identity = 223/369 (60.43%), Postives = 285/369 (77.24%), Query Frame = 0 

Query: 84  NYCSHGALRSECFDESVNSEETNDLKSRIFRLRLPKRSATNVLQRWTSEGNQVTITELRT 143
           +Y +  A+ +   +E   SEE +DLKSRIFRLRLPKRSAT VL++W  EGNQ+TI ELR 
Sbjct: 36  SYNADAAIGNSLVEE---SEEKDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELRE 95

Query: 144 ISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIRIDLMTKVFGVDAADRYFEGLPIG 203
           ISKELRR +RYKHALE+ EWMV H E ++SD+D+A RIDL++KVFG+DAA+RYFEGL I 
Sbjct: 96  ISKELRRTRRYKHALEVTEWMVQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDID 155

Query: 204 AKTCETYTALLHSFAGSKLTEKAETLYEKIKES-NIPLTALPFNEMMTLYMSVGQVEKVS 263
           +KT ETYT+LLH++A SK TE+AE L+++I ES ++   A+ +NEMMTLYMSVGQVEKV 
Sbjct: 156 SKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVP 215

Query: 264 SIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVGQILSEMNHNPNSNKDWVRYIDLVNI 323
            +++ LKQ+ V PDIFTYNLW+SS AA  NID + +IL EM H+ +SN+ WVRYIDL +I
Sbjct: 216 EVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSI 275

Query: 324 YIKSAHLLHSESNSIVESESGISQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKM 383
           YI S+ + ++ES   VE+E  ISQREWITYD L+IL+ GLGNK  IDQIW+SLR T Q +
Sbjct: 276 YINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQIL 335

Query: 384 TSRNYICVLSCYLMLDHLKEIGEIIDQWKQSTTTDFDVSVCKRLVNAFVEAGLNEKANSF 443
           +SR+YICVLS YLML HL+E  EII QWK+S TT+FD S C R++NAF + GL   A+ F
Sbjct: 336 SSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASACLRILNAFRDVGLEGIASGF 395

Query: 444 VTLLIQKNC 452
             +L+   C
Sbjct: 396 HLILVHNKC 401

[Close]
BLAST of Clc09G17780 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.5e-56
Identity = 114/324 (35.19%), Postives = 195/324 (60.19%), Query Frame = 0 

Query: 98  ESVNSEET-----NDLKSRIFRLRLPKRSATNVLQRWTSEGNQVTITELRTISKELRRIQ 157
           ES N +ET     + L  R+  L   KRSA   +++W  EG+ V   EL  I +ELR+I+
Sbjct: 48  ESANKKETVVGGRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIK 107

Query: 158 RYKHALEILEWMVTHNEFELSDSDFAIRIDLMTKVFGVDAADRYFEGLPIGAKTCETYTA 217
           RYKHALEI EWMV   + +L   D+A+ +DL++K+ G+++A+++FE +P   +     T+
Sbjct: 108 RYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTS 167

Query: 218 LLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRM 277
           LLHS+  +KL++KAE L+EK+ E     + LP+N M+++Y+S GQ EKV  ++ +LK R 
Sbjct: 168 LLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR- 227

Query: 278 VHPDIFTYNLWISSLAAALNIDGVGQILSEMNHNPNSNKDWVRYIDLVNIYIKSAHLLHS 337
             PDI TYNLW+++ A+  +++G  ++  +       N DWV Y  L N+Y K+ + +  
Sbjct: 228 TSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEE-KLNPDWVTYSVLTNLYAKTDN-VEK 287

Query: 338 ESNSIVESESGISQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICVLS 397
              ++ E E  +S++  + Y  LI L+A LG+KD ++  W+ ++ + +KM    Y+ ++S
Sbjct: 288 ARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMIS 347

Query: 398 CYLMLDHLKEIGEIIDQWKQSTTT 417
             + L   ++   + D+W+  + T
Sbjct: 348 AVVKLGEFEQAKGLYDEWESVSGT 368

[Close]
BLAST of Clc09G17780 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-50
Identity = 109/343 (31.78%), Postives = 189/343 (55.10%), Query Frame = 0 

Query: 108 LKSRIFRLRLPKRSATNVLQRWTSEGNQVTITELRTISKELRRIQRYKHALEILEWMVTH 167
           L+ R+ R   P  S   VL  W  +GN V  +EL +I K LR+  R+ HAL+I +WM  H
Sbjct: 40  LQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEH 99

Query: 168 NEFELSDSDFAIRIDLMTKVFGVDAADRYFEGLPIGAKTCETYTALLHSFAGSKLTEKAE 227
              E+S+ D AIR+DL+ KV G+  A+++FE +P+  +    Y ALL+ +A  K+  KAE
Sbjct: 100 RVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAE 159

Query: 228 TLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 287
            +++++KE       LP+N M+ LY+  G+   V  ++ +++   V PDIFT N  + + 
Sbjct: 160 QVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAY 219

Query: 288 AAALNIDGVGQILSEMNHNPNSNKDWVRYIDLVNIYIKSAHLLHSESNSIVESESGI-SQ 347
           +   +++G+ + L     +   + DW  Y D  N YIK A L       + +SE  + +Q
Sbjct: 220 SVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIK-AGLTEKALEMLRKSEQMVNAQ 279

Query: 348 REWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICVLSCYLMLDHLKEIGEI 407
           +    Y++L+  Y   G K+++ ++W SL        +  YI V+S  L +D ++E+ +I
Sbjct: 280 KRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEKI 339

Query: 408 IDQWKQSTTTDFDVSVCKRLVNAFVEAGLNEKANSFVTLLIQK 450
           +++W+   +  FD+ +   L+  + + G+ EKA   V +L+QK
Sbjct: 340 MEEWEAGHSL-FDIRIPHLLITGYCKKGMMEKAEEVVNILVQK 379

[Close]
BLAST of Clc09G17780 vs. ExPASy Swiss-Prot
Match: Q3E911 (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.4e-46
Identity = 113/349 (32.38%), Postives = 187/349 (53.58%), Query Frame = 0 

Query: 106 NDLKSRIFRLRLPKRSATNVLQRWTSEGNQVTITELRTISKELRRIQRYKHALEILEWMV 165
           N LK  I R   P+RS T++LQ     G+ V+++ELR ISK L R  RY  AL+++EWM 
Sbjct: 39  NSLK-EILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWME 98

Query: 166 THNEFELSDSDFAIRIDLMTKVFGVDAADRYFEGL---PIGAKTCET-YTALLHSFAGSK 225
              + E S  D A+R+DL+ K  G+   + YFE L    +  +  ++ Y  LL ++  +K
Sbjct: 99  NQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNK 158

Query: 226 LTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYN 285
           + ++AE L EK+      +T  PFNEMM LY + GQ EKV  +V  +K   +  ++ +YN
Sbjct: 159 MVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYN 218

Query: 286 LWISSLAAALNIDGVGQILSEMNHNPNSNKDWVRYIDLVNIYIKSAHLLHSESNSIVE-S 345
           LW+++      +  V  +  EM  + +    W     L N+YIKS      ++  ++E +
Sbjct: 219 LWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSG--FDEKARLVLEDA 278

Query: 346 ESGISQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICVLSCYLMLDHL 405
           E  +++   + Y  LI LYA LGNK+ + ++W   +    +++  NYICVLS  +    L
Sbjct: 279 EKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDL 338

Query: 406 KEIGEIIDQWKQSTTTDFDVSVCKRLVNAFVEAGLNEKANSFVTLLIQK 450
           +E   +  +W ++   ++DV V   L+ A+V  G   KA S    ++++
Sbjct: 339 EEAERVFSEW-EAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLER 383

[Close]
BLAST of Clc09G17780 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.3e-44
Identity = 102/295 (34.58%), Postives = 168/295 (56.95%), Query Frame = 0 

Query: 146 KELRRIQRYKHALEILEWMVTHNEFELSDSDFAIRIDLMTKVFGVDAADRYFEGLPIGAK 205
           K+LR    Y  AL++ E ++       + SD AI +DL+ K   + A + YF  LP  +K
Sbjct: 63  KKLRNRGLYYPALKLSE-VMEERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSK 122

Query: 206 TCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSSIV 265
           T  TY +LL+ +    LTEKAE L  K+KE NI  +++ +N +MTLY   G+ EKV +++
Sbjct: 123 TELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMI 182

Query: 266 DDLKQRMVHPDIFTYNLWISSLAAALNIDGVGQILSEMNHNPNSNKDWVRYIDLVNIYIK 325
            +LK   V PD +TYN+W+ +LAA  +I GV +++ EMN +     DW  Y ++ +IY+ 
Sbjct: 183 QELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYV- 242

Query: 326 SAHLLHSESNSIVESESGISQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSR 385
            A L      ++ E E   +QR++  Y  LI LY  LG   ++ +IWRSLR+   K ++ 
Sbjct: 243 DAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNV 302

Query: 386 NYICVLSCYLMLDHLKEIGEIIDQWKQSTTTDFDVSVCKRLVNAFVEAGLNEKAN 441
            Y+ ++   + L+ L     +  +W+ + +T +D+ +   L+ A+ + GL +KAN
Sbjct: 303 AYLNMIQVLVKLNDLPGAETLFKEWQANCST-YDIRIVNVLIGAYAQEGLIQKAN 354

[Close]
BLAST of Clc09G17780 vs. ExPASy TrEMBL
Match: A0A0A0K649 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066290 PE=4 SV=1)

HSP 1 Score: 715.7 bits (1846), Expect = 1.2e-202
Identity = 353/398 (88.69%), Postives = 379/398 (95.23%), Query Frame = 0 

Query: 59  RKFRNRSFLNQSFKAIPVFNEASVSNYCSHGALRSECFDESVNSEETNDLKSRIFRLRLP 118
           RKFRNR FLNQSFK+ PVFNEA+VSNYCSHGALRSE FDESVN EE NDLKSRIF+LRLP
Sbjct: 12  RKFRNRGFLNQSFKSTPVFNEANVSNYCSHGALRSESFDESVNYEEFNDLKSRIFQLRLP 71

Query: 119 KRSATNVLQRWTSEGNQVTITELRTISKELRRIQRYKHALEILEWMVTHNEFELSDSDFA 178
           KRSA  VL+RWTSEGNQVTI ELR ISKELR+IQRYKHALEILEWMV+HN+ ELSDSDFA
Sbjct: 72  KRSAIRVLERWTSEGNQVTIAELRNISKELRKIQRYKHALEILEWMVSHNQSELSDSDFA 131

Query: 179 IRIDLMTKVFGVDAADRYFEGLPIGAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNI 238
           IRIDLMTKVFGVDAA+RYFEGLPI AKTCETYTALLHSFAGSKLT+KAETLYEK+KES+I
Sbjct: 132 IRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAETLYEKMKESDI 191

Query: 239 PLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVGQ 298
           PLTALPFNEMMTLY S+GQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGV Q
Sbjct: 192 PLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVKQ 251

Query: 299 ILSEMNHNPNSNKDWVRYIDLVNIYIKSAHLLHSESNSIVESESGISQREWITYDLLIIL 358
           IL+EMNHNPNSN++WVRYI+LVNIY+KSA+LLHSESNS+VES SGISQREWITYDLLIIL
Sbjct: 252 ILNEMNHNPNSNENWVRYIELVNIYVKSANLLHSESNSVVESVSGISQREWITYDLLIIL 311

Query: 359 YAGLGNKDKIDQIWRSLRMTKQKMTSRNYICVLSCYLMLDHLKEIGEIIDQWKQSTTTDF 418
           YAGLGNKDKIDQIWRSLRMTKQKMTSRNYIC++SCYLMLD LKEIGE+IDQWKQSTTTDF
Sbjct: 312 YAGLGNKDKIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVIDQWKQSTTTDF 371

Query: 419 DVSVCKRLVNAFVEAGLNEKANSFVTLLIQKNCESTEA 457
           D+S C RLVNAF+EAGL+EKANSFV +LIQKNCE TEA
Sbjct: 372 DISSCNRLVNAFIEAGLHEKANSFVNVLIQKNCEPTEA 409

[Close]
BLAST of Clc09G17780 vs. ExPASy TrEMBL
Match: A0A1S3C0B7 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495377 PE=4 SV=1)

HSP 1 Score: 712.6 bits (1838), Expect = 1.0e-201
Identity = 352/398 (88.44%), Postives = 379/398 (95.23%), Query Frame = 0 

Query: 59  RKFRNRSFLNQSFKAIPVFNEASVSNYCSHGALRSECFDESVNSEETNDLKSRIFRLRLP 118
           RKFRNR FLNQSFK+IPVFNEA++SNYCSHGALRSE FD+SVNSEE NDLKSRIF+LRLP
Sbjct: 12  RKFRNRGFLNQSFKSIPVFNEANISNYCSHGALRSESFDDSVNSEEFNDLKSRIFQLRLP 71

Query: 119 KRSATNVLQRWTSEGNQVTITELRTISKELRRIQRYKHALEILEWMVTHNEFELSDSDFA 178
           KRSA  VL+RWTSEGNQVTITELR ISKELR+IQRYKHALEILEWMVTHN+ +LSDSDFA
Sbjct: 72  KRSAIRVLERWTSEGNQVTITELRNISKELRKIQRYKHALEILEWMVTHNKSDLSDSDFA 131

Query: 179 IRIDLMTKVFGVDAADRYFEGLPIGAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNI 238
           IRIDLMTKVFGVDAA+RYFEGLPI AKTCETYTALLHSFAGSKLT+KAETLYEKIKES+I
Sbjct: 132 IRIDLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAETLYEKIKESDI 191

Query: 239 PLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVGQ 298
           PLTALPFNEMMTLY S+GQVEKVSSIVDDLKQ+MVHPDIFTYNLWISSLAAALNIDGV Q
Sbjct: 192 PLTALPFNEMMTLYTSIGQVEKVSSIVDDLKQKMVHPDIFTYNLWISSLAAALNIDGVKQ 251

Query: 299 ILSEMNHNPNSNKDWVRYIDLVNIYIKSAHLLHSESNSIVESESGISQREWITYDLLIIL 358
           IL+EMN NPNSN++WVRYI+LVNIYIKSA+LLHS SNS+VES SGISQREWITYDLLIIL
Sbjct: 252 ILNEMNQNPNSNENWVRYIELVNIYIKSANLLHSGSNSVVESASGISQREWITYDLLIIL 311

Query: 359 YAGLGNKDKIDQIWRSLRMTKQKMTSRNYICVLSCYLMLDHLKEIGEIIDQWKQSTTTDF 418
           YAGLGNKD+IDQIWRSLRMTKQKMTSRNYIC++SCYLMLD LKEIGE+IDQWKQSTTTDF
Sbjct: 312 YAGLGNKDRIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVIDQWKQSTTTDF 371

Query: 419 DVSVCKRLVNAFVEAGLNEKANSFVTLLIQKNCESTEA 457
           D+S C RLVNAFVEAGLNEKANSFV +LIQKNC+ T A
Sbjct: 372 DISSCNRLVNAFVEAGLNEKANSFVNVLIQKNCDPTVA 409

[Close]
BLAST of Clc09G17780 vs. ExPASy TrEMBL
Match: A0A5D3C6J0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001890 PE=4 SV=1)

HSP 1 Score: 706.4 bits (1822), Expect = 7.5e-200
Identity = 349/395 (88.35%), Postives = 376/395 (95.19%), Query Frame = 0 

Query: 62  RNRSFLNQSFKAIPVFNEASVSNYCSHGALRSECFDESVNSEETNDLKSRIFRLRLPKRS 121
           RNR FLNQSFK+IPVFNEA++SNYCSHGALRSE FD+SVNSEE NDLKSRIF+LRLPKRS
Sbjct: 12  RNRGFLNQSFKSIPVFNEANISNYCSHGALRSESFDDSVNSEEFNDLKSRIFQLRLPKRS 71

Query: 122 ATNVLQRWTSEGNQVTITELRTISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIRI 181
           A  VL+RWTSEGNQVTITELR ISKELR+IQRYKHALEILEWMVTHN+ +LSDSDFAIRI
Sbjct: 72  AIRVLERWTSEGNQVTITELRNISKELRKIQRYKHALEILEWMVTHNKSDLSDSDFAIRI 131

Query: 182 DLMTKVFGVDAADRYFEGLPIGAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLT 241
           DLMTKVFGVDAA+RYFEGLPI AKTCETYTALLHSFAGSKLT+KAETLYEKIKES+IPLT
Sbjct: 132 DLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAETLYEKIKESDIPLT 191

Query: 242 ALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVGQILS 301
           ALPFNEMMTLY S+GQVEKVSSIVDDLKQ+MVHPDIFTYNLWISSLAAALNIDGV QIL+
Sbjct: 192 ALPFNEMMTLYTSIGQVEKVSSIVDDLKQKMVHPDIFTYNLWISSLAAALNIDGVKQILN 251

Query: 302 EMNHNPNSNKDWVRYIDLVNIYIKSAHLLHSESNSIVESESGISQREWITYDLLIILYAG 361
           EMN NPNSN++WVRYI+LVNIYIKSA+LLHS SNS+VES SGISQREWITYDLLIILYAG
Sbjct: 252 EMNQNPNSNENWVRYIELVNIYIKSANLLHSGSNSVVESASGISQREWITYDLLIILYAG 311

Query: 362 LGNKDKIDQIWRSLRMTKQKMTSRNYICVLSCYLMLDHLKEIGEIIDQWKQSTTTDFDVS 421
           LGNKD+IDQIWRSLRMTKQKMTSRNYIC++SCYLMLD LKEIGE+IDQWKQSTTTDFD+S
Sbjct: 312 LGNKDRIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVIDQWKQSTTTDFDIS 371

Query: 422 VCKRLVNAFVEAGLNEKANSFVTLLIQKNCESTEA 457
            C RLVNAFVEAGLNEKANSFV +LIQKNC+ T A
Sbjct: 372 SCNRLVNAFVEAGLNEKANSFVNVLIQKNCDPTVA 406

[Close]
BLAST of Clc09G17780 vs. ExPASy TrEMBL
Match: A0A1S3C072 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495377 PE=4 SV=1)

HSP 1 Score: 706.4 bits (1822), Expect = 7.5e-200
Identity = 349/395 (88.35%), Postives = 376/395 (95.19%), Query Frame = 0 

Query: 62  RNRSFLNQSFKAIPVFNEASVSNYCSHGALRSECFDESVNSEETNDLKSRIFRLRLPKRS 121
           RNR FLNQSFK+IPVFNEA++SNYCSHGALRSE FD+SVNSEE NDLKSRIF+LRLPKRS
Sbjct: 12  RNRGFLNQSFKSIPVFNEANISNYCSHGALRSESFDDSVNSEEFNDLKSRIFQLRLPKRS 71

Query: 122 ATNVLQRWTSEGNQVTITELRTISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIRI 181
           A  VL+RWTSEGNQVTITELR ISKELR+IQRYKHALEILEWMVTHN+ +LSDSDFAIRI
Sbjct: 72  AIRVLERWTSEGNQVTITELRNISKELRKIQRYKHALEILEWMVTHNKSDLSDSDFAIRI 131

Query: 182 DLMTKVFGVDAADRYFEGLPIGAKTCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLT 241
           DLMTKVFGVDAA+RYFEGLPI AKTCETYTALLHSFAGSKLT+KAETLYEKIKES+IPLT
Sbjct: 132 DLMTKVFGVDAAERYFEGLPIDAKTCETYTALLHSFAGSKLTDKAETLYEKIKESDIPLT 191

Query: 242 ALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVGQILS 301
           ALPFNEMMTLY S+GQVEKVSSIVDDLKQ+MVHPDIFTYNLWISSLAAALNIDGV QIL+
Sbjct: 192 ALPFNEMMTLYTSIGQVEKVSSIVDDLKQKMVHPDIFTYNLWISSLAAALNIDGVKQILN 251

Query: 302 EMNHNPNSNKDWVRYIDLVNIYIKSAHLLHSESNSIVESESGISQREWITYDLLIILYAG 361
           EMN NPNSN++WVRYI+LVNIYIKSA+LLHS SNS+VES SGISQREWITYDLLIILYAG
Sbjct: 252 EMNQNPNSNENWVRYIELVNIYIKSANLLHSGSNSVVESASGISQREWITYDLLIILYAG 311

Query: 362 LGNKDKIDQIWRSLRMTKQKMTSRNYICVLSCYLMLDHLKEIGEIIDQWKQSTTTDFDVS 421
           LGNKD+IDQIWRSLRMTKQKMTSRNYIC++SCYLMLD LKEIGE+IDQWKQSTTTDFD+S
Sbjct: 312 LGNKDRIDQIWRSLRMTKQKMTSRNYICIVSCYLMLDDLKEIGEVIDQWKQSTTTDFDIS 371

Query: 422 VCKRLVNAFVEAGLNEKANSFVTLLIQKNCESTEA 457
            C RLVNAFVEAGLNEKANSFV +LIQKNC+ T A
Sbjct: 372 SCNRLVNAFVEAGLNEKANSFVNVLIQKNCDPTVA 406

[Close]
BLAST of Clc09G17780 vs. ExPASy TrEMBL
Match: A0A6J1GLW9 (pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455447 PE=4 SV=1)

HSP 1 Score: 705.7 bits (1820), Expect = 1.3e-199
Identity = 355/405 (87.65%), Postives = 375/405 (92.59%), Query Frame = 0 

Query: 52  VYFDLNPRKFRNRSFLNQSFKAIPVFNEASVSNYCSHGALRSECFDESVNSEETNDLKSR 111
           ++  LN RKFRNR FLNQSFKAI VFNEASVSNYCSHGALRSE  DESVNSEETNDLKSR
Sbjct: 6   LFLSLN-RKFRNRGFLNQSFKAILVFNEASVSNYCSHGALRSESLDESVNSEETNDLKSR 65

Query: 112 IFRLRLPKRSATNVLQRWTSEGNQVTITELRTISKELRRIQRYKHALEILEWMVTHNEFE 171
           IFRLRLPKRSA NV+QRWTSEGNQVTITELR ISKELRR+QRYKHALEILEWMV+HNE E
Sbjct: 66  IFRLRLPKRSAINVIQRWTSEGNQVTITELRNISKELRRLQRYKHALEILEWMVSHNENE 125

Query: 172 LSDSDFAIRIDLMTKVFGVDAADRYFEGLPIGAKTCETYTALLHSFAGSKLTEKAETLYE 231
           LSDSDFAIRIDLMTKVFG+DAA+RYFEGLPI AKTCETYTALLHSFAGSKLTEKAETLYE
Sbjct: 126 LSDSDFAIRIDLMTKVFGIDAAERYFEGLPINAKTCETYTALLHSFAGSKLTEKAETLYE 185

Query: 232 KIKESNIPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSLAAAL 291
           K+KES IPLTALPFNEMMTLY SVGQVEKVSSIVDDLKQ  VHPDIFTYNLWISSLAA L
Sbjct: 186 KMKESGIPLTALPFNEMMTLYTSVGQVEKVSSIVDDLKQSKVHPDIFTYNLWISSLAATL 245

Query: 292 NIDGVGQILSEMNHNPNSNKDWVRYIDLVNIYIKSAHLLHSESNSIVESESGISQREWIT 351
           NIDGV +IL EMN NPNSN+ WVRYI+LVNIYI SAHLLHSESNS+VESESGI+QREWIT
Sbjct: 246 NIDGVRRILDEMNRNPNSNEVWVRYINLVNIYITSAHLLHSESNSVVESESGITQREWIT 305

Query: 352 YDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICVLSCYLMLDHLKEIGEIIDQWK 411
           YDLLIILYAG+GNKDKIDQIWRSLRMT+QKMTSRNYIC+LSCYLMLDHLKEIGE+IDQWK
Sbjct: 306 YDLLIILYAGMGNKDKIDQIWRSLRMTRQKMTSRNYICILSCYLMLDHLKEIGEVIDQWK 365

Query: 412 QSTTTDFDVSVCKRLVNAFVEAGLNEKANSFVTLLIQKNCESTEA 457
           QS++ DFDVS C RLVNAFVEAG  EK NSFVT+L  KNCE TEA
Sbjct: 366 QSSSGDFDVSACNRLVNAFVEAGFKEKGNSFVTIL--KNCEPTEA 407

[Close]
BLAST of Clc09G17780 vs. TAIR 10
Match: AT5G09450.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 447.6 bits (1150), Expect = 1.2e-125
Identity = 223/369 (60.43%), Postives = 285/369 (77.24%), Query Frame = 0 

Query: 84  NYCSHGALRSECFDESVNSEETNDLKSRIFRLRLPKRSATNVLQRWTSEGNQVTITELRT 143
           +Y +  A+ +   +E   SEE +DLKSRIFRLRLPKRSAT VL++W  EGNQ+TI ELR 
Sbjct: 36  SYNADAAIGNSLVEE---SEEKDDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELRE 95

Query: 144 ISKELRRIQRYKHALEILEWMVTHNEFELSDSDFAIRIDLMTKVFGVDAADRYFEGLPIG 203
           ISKELRR +RYKHALE+ EWMV H E ++SD+D+A RIDL++KVFG+DAA+RYFEGL I 
Sbjct: 96  ISKELRRTRRYKHALEVTEWMVQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDID 155

Query: 204 AKTCETYTALLHSFAGSKLTEKAETLYEKIKES-NIPLTALPFNEMMTLYMSVGQVEKVS 263
           +KT ETYT+LLH++A SK TE+AE L+++I ES ++   A+ +NEMMTLYMSVGQVEKV 
Sbjct: 156 SKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVP 215

Query: 264 SIVDDLKQRMVHPDIFTYNLWISSLAAALNIDGVGQILSEMNHNPNSNKDWVRYIDLVNI 323
            +++ LKQ+ V PDIFTYNLW+SS AA  NID + +IL EM H+ +SN+ WVRYIDL +I
Sbjct: 216 EVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSI 275

Query: 324 YIKSAHLLHSESNSIVESESGISQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKM 383
           YI S+ + ++ES   VE+E  ISQREWITYD L+IL+ GLGNK  IDQIW+SLR T Q +
Sbjct: 276 YINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQIL 335

Query: 384 TSRNYICVLSCYLMLDHLKEIGEIIDQWKQSTTTDFDVSVCKRLVNAFVEAGLNEKANSF 443
           +SR+YICVLS YLML HL+E  EII QWK+S TT+FD S C R++NAF + GL   A+ F
Sbjct: 336 SSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASACLRILNAFRDVGLEGIASGF 395

Query: 444 VTLLIQKNC 452
             +L+   C
Sbjct: 396 HLILVHNKC 401

[Close]
BLAST of Clc09G17780 vs. TAIR 10
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 219.5 bits (558), Expect = 5.4e-57
Identity = 114/324 (35.19%), Postives = 195/324 (60.19%), Query Frame = 0 

Query: 98  ESVNSEET-----NDLKSRIFRLRLPKRSATNVLQRWTSEGNQVTITELRTISKELRRIQ 157
           ES N +ET     + L  R+  L   KRSA   +++W  EG+ V   EL  I +ELR+I+
Sbjct: 48  ESANKKETVVGGRDTLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIK 107

Query: 158 RYKHALEILEWMVTHNEFELSDSDFAIRIDLMTKVFGVDAADRYFEGLPIGAKTCETYTA 217
           RYKHALEI EWMV   + +L   D+A+ +DL++K+ G+++A+++FE +P   +     T+
Sbjct: 108 RYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTS 167

Query: 218 LLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRM 277
           LLHS+  +KL++KAE L+EK+ E     + LP+N M+++Y+S GQ EKV  ++ +LK R 
Sbjct: 168 LLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR- 227

Query: 278 VHPDIFTYNLWISSLAAALNIDGVGQILSEMNHNPNSNKDWVRYIDLVNIYIKSAHLLHS 337
             PDI TYNLW+++ A+  +++G  ++  +       N DWV Y  L N+Y K+ + +  
Sbjct: 228 TSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEE-KLNPDWVTYSVLTNLYAKTDN-VEK 287

Query: 338 ESNSIVESESGISQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICVLS 397
              ++ E E  +S++  + Y  LI L+A LG+KD ++  W+ ++ + +KM    Y+ ++S
Sbjct: 288 ARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMIS 347

Query: 398 CYLMLDHLKEIGEIIDQWKQSTTT 417
             + L   ++   + D+W+  + T
Sbjct: 348 AVVKLGEFEQAKGLYDEWESVSGT 368

[Close]
BLAST of Clc09G17780 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 201.8 bits (512), Expect = 1.2e-51
Identity = 109/343 (31.78%), Postives = 189/343 (55.10%), Query Frame = 0 

Query: 108 LKSRIFRLRLPKRSATNVLQRWTSEGNQVTITELRTISKELRRIQRYKHALEILEWMVTH 167
           L+ R+ R   P  S   VL  W  +GN V  +EL +I K LR+  R+ HAL+I +WM  H
Sbjct: 40  LQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEH 99

Query: 168 NEFELSDSDFAIRIDLMTKVFGVDAADRYFEGLPIGAKTCETYTALLHSFAGSKLTEKAE 227
              E+S+ D AIR+DL+ KV G+  A+++FE +P+  +    Y ALL+ +A  K+  KAE
Sbjct: 100 RVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAE 159

Query: 228 TLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYNLWISSL 287
            +++++KE       LP+N M+ LY+  G+   V  ++ +++   V PDIFT N  + + 
Sbjct: 160 QVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAY 219

Query: 288 AAALNIDGVGQILSEMNHNPNSNKDWVRYIDLVNIYIKSAHLLHSESNSIVESESGI-SQ 347
           +   +++G+ + L     +   + DW  Y D  N YIK A L       + +SE  + +Q
Sbjct: 220 SVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIK-AGLTEKALEMLRKSEQMVNAQ 279

Query: 348 REWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICVLSCYLMLDHLKEIGEI 407
           +    Y++L+  Y   G K+++ ++W SL        +  YI V+S  L +D ++E+ +I
Sbjct: 280 KRKHAYEVLMSFYGAAGKKEEVYRLW-SLYKELDGFYNTGYISVISALLKMDDIEEVEKI 339

Query: 408 IDQWKQSTTTDFDVSVCKRLVNAFVEAGLNEKANSFVTLLIQK 450
           +++W+   +  FD+ +   L+  + + G+ EKA   V +L+QK
Sbjct: 340 MEEWEAGHSL-FDIRIPHLLITGYCKKGMMEKAEEVVNILVQK 379

[Close]
BLAST of Clc09G17780 vs. TAIR 10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 188.0 bits (476), Expect = 1.7e-47
Identity = 113/349 (32.38%), Postives = 187/349 (53.58%), Query Frame = 0 

Query: 106 NDLKSRIFRLRLPKRSATNVLQRWTSEGNQVTITELRTISKELRRIQRYKHALEILEWMV 165
           N LK  I R   P+RS T++LQ     G+ V+++ELR ISK L R  RY  AL+++EWM 
Sbjct: 39  NSLK-EILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWME 98

Query: 166 THNEFELSDSDFAIRIDLMTKVFGVDAADRYFEGL---PIGAKTCET-YTALLHSFAGSK 225
              + E S  D A+R+DL+ K  G+   + YFE L    +  +  ++ Y  LL ++  +K
Sbjct: 99  NQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNK 158

Query: 226 LTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSSIVDDLKQRMVHPDIFTYN 285
           + ++AE L EK+      +T  PFNEMM LY + GQ EKV  +V  +K   +  ++ +YN
Sbjct: 159 MVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYN 218

Query: 286 LWISSLAAALNIDGVGQILSEMNHNPNSNKDWVRYIDLVNIYIKSAHLLHSESNSIVE-S 345
           LW+++      +  V  +  EM  + +    W     L N+YIKS      ++  ++E +
Sbjct: 219 LWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSG--FDEKARLVLEDA 278

Query: 346 ESGISQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSRNYICVLSCYLMLDHL 405
           E  +++   + Y  LI LYA LGNK+ + ++W   +    +++  NYICVLS  +    L
Sbjct: 279 EKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDL 338

Query: 406 KEIGEIIDQWKQSTTTDFDVSVCKRLVNAFVEAGLNEKANSFVTLLIQK 450
           +E   +  +W ++   ++DV V   L+ A+V  G   KA S    ++++
Sbjct: 339 EEAERVFSEW-EAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLER 383

[Close]
BLAST of Clc09G17780 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 182.2 bits (461), Expect = 9.5e-46
Identity = 102/295 (34.58%), Postives = 168/295 (56.95%), Query Frame = 0 

Query: 146 KELRRIQRYKHALEILEWMVTHNEFELSDSDFAIRIDLMTKVFGVDAADRYFEGLPIGAK 205
           K+LR    Y  AL++ E ++       + SD AI +DL+ K   + A + YF  LP  +K
Sbjct: 63  KKLRNRGLYYPALKLSE-VMEERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSK 122

Query: 206 TCETYTALLHSFAGSKLTEKAETLYEKIKESNIPLTALPFNEMMTLYMSVGQVEKVSSIV 265
           T  TY +LL+ +    LTEKAE L  K+KE NI  +++ +N +MTLY   G+ EKV +++
Sbjct: 123 TELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMI 182

Query: 266 DDLKQRMVHPDIFTYNLWISSLAAALNIDGVGQILSEMNHNPNSNKDWVRYIDLVNIYIK 325
            +LK   V PD +TYN+W+ +LAA  +I GV +++ EMN +     DW  Y ++ +IY+ 
Sbjct: 183 QELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYV- 242

Query: 326 SAHLLHSESNSIVESESGISQREWITYDLLIILYAGLGNKDKIDQIWRSLRMTKQKMTSR 385
            A L      ++ E E   +QR++  Y  LI LY  LG   ++ +IWRSLR+   K ++ 
Sbjct: 243 DAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNV 302

Query: 386 NYICVLSCYLMLDHLKEIGEIIDQWKQSTTTDFDVSVCKRLVNAFVEAGLNEKAN 441
            Y+ ++   + L+ L     +  +W+ + +T +D+ +   L+ A+ + GL +KAN
Sbjct: 303 AYLNMIQVLVKLNDLPGAETLFKEWQANCST-YDIRIVNVLIGAYAQEGLIQKAN 354

The following BLAST results are available for this feature:
BLAST of Clc09G17780 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038888933.11.0e-20690.95pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 ... [more]
XP_038888936.15.0e-20691.16pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X4 ... [more]
XP_038888934.11.9e-20591.14pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X2 ... [more]
XP_038888937.17.2e-20591.12pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X5 ... [more]
XP_038888935.12.7e-20490.86pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X3 ... [more]
BLAST of Clc09G17780 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94B591.7e-12460.43Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidop... [more]
Q9SY077.5e-5635.19Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop... [more]
Q9SKU61.6e-5031.78Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop... [more]
Q3E9112.4e-4632.38Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX... [more]
O227141.3e-4434.58Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX... [more]
BLAST of Clc09G17780 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6491.2e-20288.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066290 PE=4 SV=1[more]
A0A1S3C0B71.0e-20188.44pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 ... [more]
A0A5D3C6J07.5e-20088.35Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3C0727.5e-20088.35pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X2 ... [more]
A0A6J1GLW91.3e-19987.65pentatricopeptide repeat-containing protein At5g09450, mitochondrial isoform X1 ... [more]
BLAST of Clc09G17780 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G09450.11.2e-12560.43Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G02820.15.4e-5735.19Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G20710.11.2e-5131.78Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G27460.11.7e-4732.38Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G60770.19.5e-4634.58Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 242..308
e-value: 1.5E-7
score: 33.1
coord: 114..241
e-value: 2.7E-7
score: 32.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 319..456
e-value: 1.5E-5
score: 26.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 209..241
e-value: 1.4E-4
score: 19.8
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 231..285
e-value: 6.5E-5
score: 22.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 206..240
score: 9.032168
NoneNo IPR availablePANTHERPTHR45717OS12G0527900 PROTEINcoord: 77..454
NoneNo IPR availablePANTHERPTHR45717:SF4BNAC02G00860D PROTEINcoord: 77..454

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc09G17780.2Clc09G17780.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding