Clc09G14454 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G14454
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	60S ribosomal protein L35
Location	ClcChr09: 18683098 .. 18683421 (-)
RNA-Seq Expression	Clc09G14454
Synteny	Clc09G14454

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAAATGGCAAGGATCAAGGTTCATTAGTTGAGGCAGTAATTGAAGGCAAATTGGCCAAAGTCATCGGTGGTGCACCAAACAAGCTATCCAAAATCAAGGTATTGAGATTGTCGATCACTCAAGTCCCAATAGTAATTTCTCAAAAGCAGAAGGTGGCAATGAAGGAAGCTTACAAGAAGAAGAAACTTTTGCATGTCGATCTGCAGCCAAAGAATACCGAGGTCATTCATAAAAGGCTCACCAAGCACCAGGCTTCTTTGAAAACTGAGACAGAAGAAGAAAGAAATGTACTTTCCATTGAGGAAATATGCTATTAA

mRNA sequence

ATGGGAAGAAATGGCAAGGATCAAGGTTCATTAGTTGAGGCAGTAATTGAAGGCAAATTGGCCAAAGTCATCGGTGGTGCACCAAACAAGCTATCCAAAATCAAGGTATTGAGATTGTCGATCACTCAAGTCCCAATAGTAATTTCTCAAAAGCAGAAGGTGGCAATGAAGGAAGCTTACAAGAAGAAGAAACTTTTGCATGTCGATCTGCAGCCAAAGAATACCGAGGTCATTCATAAAAGGCTCACCAAGCACCAGGCTTCTTTGAAAACTGAGACAGAAGAAGAAAGAAATGTACTTTCCATTGAGGAAATATGCTATTAA

Coding sequence (CDS)

ATGGGAAGAAATGGCAAGGATCAAGGTTCATTAGTTGAGGCAGTAATTGAAGGCAAATTGGCCAAAGTCATCGGTGGTGCACCAAACAAGCTATCCAAAATCAAGGTATTGAGATTGTCGATCACTCAAGTCCCAATAGTAATTTCTCAAAAGCAGAAGGTGGCAATGAAGGAAGCTTACAAGAAGAAGAAACTTTTGCATGTCGATCTGCAGCCAAAGAATACCGAGGTCATTCATAAAAGGCTCACCAAGCACCAGGCTTCTTTGAAAACTGAGACAGAAGAAGAAAGAAATGTACTTTCCATTGAGGAAATATGCTATTAA

Protein sequence

MGRNGKDQGSLVEAVIEGKLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVIHKRLTKHQASLKTETEEERNVLSIEEICY

Homology

[Close]

BLAST of Clc09G14454 vs. NCBI nr
Match: TYG77058.1 (hypothetical protein ES288_D03G164700v1 [Gossypium darwinii])

HSP 1 Score: 117.1 bits (292), Expect = 9.4e-23
Identity = 63/89 (70.79%), Postives = 74/89 (83.15%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKK L +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKFLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNVLSIEEICY 108
            +RLTKHQ SLKTE EEE +VLS EE+C+
Sbjct: 92  RRRLTKHQQSLKTEGEEEGDVLSTEEVCH 120

[Close]

BLAST of Clc09G14454 vs. NCBI nr
Match: KAG7998768.1 (hypothetical protein I3843_01G272600 [Carya illinoinensis])

HSP 1 Score: 113.2 bits (282), Expect = 1.4e-21
Identity = 60/89 (67.42%), Postives = 73/89 (82.02%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++E YKKKK L +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKEALREVYKKKKYLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNVLSIEEICY 108
            +RLT+HQASLKT  EEE +V S+EE+C+
Sbjct: 92  RRRLTRHQASLKTAAEEEGDVFSLEEVCH 120

[Close]

BLAST of Clc09G14454 vs. NCBI nr
Match: GAV80675.1 (Ribosomal_L29 domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 107.1 bits (266), Expect = 9.8e-20
Identity = 58/81 (71.60%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNV 100
            +RLTKHQASLKTE E++R +
Sbjct: 92  RRRLTKHQASLKTEREKKREM 112

[Close]

BLAST of Clc09G14454 vs. NCBI nr
Match: PON89563.1 (Ribosomal protein [Trema orientale])

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-19
Identity = 57/81 (70.37%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNV 100
            +RLTKHQASLKTE E++R++
Sbjct: 92  RRRLTKHQASLKTEREKKRDI 112

[Close]

BLAST of Clc09G14454 vs. NCBI nr
Match: XP_022939961.1 (60S ribosomal protein L35 [Cucurbita moschata] >XP_022957446.1 60S ribosomal protein L35 [Cucurbita moschata] >XP_022991739.1 60S ribosomal protein L35 [Cucurbita maxima] >XP_022993735.1 60S ribosomal protein L35 [Cucurbita maxima] >XP_023523288.1 60S ribosomal protein L35 [Cucurbita pepo subsp. pepo] >KAG6578726.1 60S ribosomal protein L35, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016256.1 60S ribosomal protein L35 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105.9 bits (263), Expect = 2.2e-19
Identity = 57/81 (70.37%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNV 100
            +RLTKHQASLKTE E+++ +
Sbjct: 92  RRRLTKHQASLKTEREKKKEM 112

[Close]

BLAST of Clc09G14454 vs. ExPASy Swiss-Prot
Match: O80626 (60S ribosomal protein L35-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35B PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 9.2e-21
Identity = 55/81 (67.90%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+R SI QV  VISQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNV 100
            +RLTKHQASLKTE E+++ +
Sbjct: 92  RRRLTKHQASLKTEREKKKEM 112

[Close]

BLAST of Clc09G14454 vs. ExPASy Swiss-Prot
Match: Q9LZ41 (60S ribosomal protein L35-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35D PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 9.2e-21
Identity = 55/81 (67.90%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+R SI QV  VISQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNV 100
            +RLTKHQASLKTE E+++ +
Sbjct: 92  RRRLTKHQASLKTEREKKKEM 112

[Close]

BLAST of Clc09G14454 vs. ExPASy Swiss-Prot
Match: Q9M5L0 (60S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 9.2e-21
Identity = 54/81 (66.67%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK+A++EAYK KK L +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKLALREAYKNKKFLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNV 100
            +RLTKHQ SLKTE E+++ +
Sbjct: 92  RRRLTKHQQSLKTEREKKKEM 112

[Close]

BLAST of Clc09G14454 vs. ExPASy Swiss-Prot
Match: Q9M3D2 (60S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 3.5e-20
Identity = 54/81 (66.67%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNV 100
            +RLTKHQASLKTE E+++++
Sbjct: 92  RRRLTKHQASLKTEREKKKDM 112

[Close]

BLAST of Clc09G14454 vs. ExPASy Swiss-Prot
Match: Q9SF53 (60S ribosomal protein L35-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35A PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 4.6e-20
Identity = 54/81 (66.67%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNV 100
            +RLTKHQASLKTE E+++ +
Sbjct: 92  RRRLTKHQASLKTEREKKKEM 112

[Close]

BLAST of Clc09G14454 vs. ExPASy TrEMBL
Match: A0A5D2D7Q5 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D03G164700v1 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 4.6e-23
Identity = 63/89 (70.79%), Postives = 74/89 (83.15%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKK L +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKFLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNVLSIEEICY 108
            +RLTKHQ SLKTE EEE +VLS EE+C+
Sbjct: 92  RRRLTKHQQSLKTEGEEEGDVLSTEEVCH 120

[Close]

BLAST of Clc09G14454 vs. ExPASy TrEMBL
Match: A0A1Q3CKE6 (Ribosomal_L29 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_24135 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.7e-20
Identity = 58/81 (71.60%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNV 100
            +RLTKHQASLKTE E++R +
Sbjct: 92  RRRLTKHQASLKTEREKKREM 112

[Close]

BLAST of Clc09G14454 vs. ExPASy TrEMBL
Match: A0A2P5EVJ6 (Ribosomal protein OS=Trema orientale OX=63057 GN=TorRG33x02_147070 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 8.1e-20
Identity = 57/81 (70.37%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNV 100
            +RLTKHQASLKTE E++R++
Sbjct: 92  RRRLTKHQASLKTEREKKRDI 112

[Close]

BLAST of Clc09G14454 vs. ExPASy TrEMBL
Match: A0A6J1JVN4 (60S ribosomal protein L35 OS=Cucurbita maxima OX=3661 GN=LOC111488270 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.1e-19
Identity = 57/81 (70.37%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNV 100
            +RLTKHQASLKTE E+++ +
Sbjct: 92  RRRLTKHQASLKTEREKKKEM 112

[Close]

BLAST of Clc09G14454 vs. ExPASy TrEMBL
Match: A0A6J1FH81 (60S ribosomal protein L35 OS=Cucurbita moschata OX=3662 GN=LOC111445667 PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.1e-19
Identity = 57/81 (70.37%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+RLSI QV  VISQKQK A++EAYKKKKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNV 100
            +RLTKHQASLKTE E+++ +
Sbjct: 92  RRRLTKHQASLKTEREKKKEM 112

[Close]

BLAST of Clc09G14454 vs. TAIR 10
Match: AT2G39390.1 (Ribosomal L29 family protein )

HSP 1 Score: 100.9 bits (250), Expect = 6.5e-22
Identity = 55/81 (67.90%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+R SI QV  VISQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNV 100
            +RLTKHQASLKTE E+++ +
Sbjct: 92  RRRLTKHQASLKTEREKKKEM 112

[Close]

BLAST of Clc09G14454 vs. TAIR 10
Match: AT5G02610.1 (Ribosomal L29 family protein )

HSP 1 Score: 100.9 bits (250), Expect = 6.5e-22
Identity = 55/81 (67.90%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+R SI QV  VISQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVISQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNV 100
            +RLTKHQASLKTE E+++ +
Sbjct: 92  RRRLTKHQASLKTEREKKKEM 112

[Close]

BLAST of Clc09G14454 vs. TAIR 10
Match: AT3G55170.1 (Ribosomal L29 family protein )

HSP 1 Score: 99.0 bits (245), Expect = 2.5e-21
Identity = 54/81 (66.67%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNV 100
            +RLTKHQASLKTE E+++++
Sbjct: 92  RRRLTKHQASLKTEREKKKDM 112

[Close]

BLAST of Clc09G14454 vs. TAIR 10
Match: AT3G55170.2 (Ribosomal L29 family protein )

HSP 1 Score: 99.0 bits (245), Expect = 2.5e-21
Identity = 54/81 (66.67%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNV 100
            +RLTKHQASLKTE E+++++
Sbjct: 92  RRRLTKHQASLKTEREKKKDM 112

[Close]

BLAST of Clc09G14454 vs. TAIR 10
Match: AT3G09500.1 (Ribosomal L29 family protein )

HSP 1 Score: 98.6 bits (244), Expect = 3.2e-21
Identity = 54/81 (66.67%), Postives = 66/81 (81.48%), Query Frame = 0


Query: 19  KLAKVIGGAPNKLSKIKVLRLSITQVPIVISQKQKVAMKEAYKKKKLLHVDLQPKNTEVI 78
           ++AKV GGAPNKLSKIKV+R SI QV  V SQKQK A++EAYK KKLL +DL+PK T  I
Sbjct: 32  RVAKVTGGAPNKLSKIKVVRKSIAQVLTVSSQKQKSALREAYKNKKLLPLDLRPKKTRAI 91

Query: 79  HKRLTKHQASLKTETEEERNV 100
            +RLTKHQASLKTE E+++ +
Sbjct: 92  RRRLTKHQASLKTEREKKKEM 112

The following BLAST results are available for this feature:

BLAST of Clc09G14454 vs. NCBI nr


Match Name	E-value	Identity	Description
TYG77058.1	9.4e-23	70.79	hypothetical protein ES288_D03G164700v1 [Gossypium darwinii]	[more]
KAG7998768.1	1.4e-21	67.42	hypothetical protein I3843_01G272600 [Carya illinoinensis]	[more]
GAV80675.1	9.8e-20	71.60	Ribosomal_L29 domain-containing protein [Cephalotus follicularis]	[more]
PON89563.1	1.7e-19	70.37	Ribosomal protein [Trema orientale]	[more]
XP_022939961.1	2.2e-19	70.37	60S ribosomal protein L35 [Cucurbita moschata] >XP_022957446.1 60S ribosomal pro...	[more]

BLAST of Clc09G14454 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80626	9.2e-21	67.90	60S ribosomal protein L35-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35B PE=2 SV=1	[more]
Q9LZ41	9.2e-21	67.90	60S ribosomal protein L35-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35D PE=2 SV=1	[more]
Q9M5L0	9.2e-21	66.67	60S ribosomal protein L35 OS=Euphorbia esula OX=3993 GN=RPL35 PE=2 SV=1	[more]
Q9M3D2	3.5e-20	66.67	60S ribosomal protein L35-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35C PE=2 SV=1	[more]
Q9SF53	4.6e-20	66.67	60S ribosomal protein L35-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35A PE=2 SV=1	[more]

BLAST of Clc09G14454 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D2D7Q5	4.6e-23	70.79	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D03G164700v1 PE=...	[more]
A0A1Q3CKE6	4.7e-20	71.60	Ribosomal_L29 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CF...	[more]
A0A2P5EVJ6	8.1e-20	70.37	Ribosomal protein OS=Trema orientale OX=63057 GN=TorRG33x02_147070 PE=3 SV=1	[more]
A0A6J1JVN4	1.1e-19	70.37	60S ribosomal protein L35 OS=Cucurbita maxima OX=3661 GN=LOC111488270 PE=3 SV=1	[more]
A0A6J1FH81	1.1e-19	70.37	60S ribosomal protein L35 OS=Cucurbita moschata OX=3662 GN=LOC111445667 PE=3 SV=...	[more]

BLAST of Clc09G14454 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39390.1	6.5e-22	67.90	Ribosomal L29 family protein	[more]
AT5G02610.1	6.5e-22	67.90	Ribosomal L29 family protein	[more]
AT3G55170.1	2.5e-21	66.67	Ribosomal L29 family protein	[more]
AT3G55170.2	2.5e-21	66.67	Ribosomal L29 family protein	[more]
AT3G09500.1	3.2e-21	66.67	Ribosomal L29 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.250.3450		coord: 65..101 e-value: 6.5E-7 score: 31.5
None	No IPR available	PANTHER	PTHR45722:SF21	60S RIBOSOMAL PROTEIN L35-LIKE	coord: 19..99
IPR036049	Ribosomal protein L29/L35 superfamily	GENE3D	1.10.287.310		coord: 10..64 e-value: 1.8E-13 score: 52.6
IPR045059	60S ribosomal protein L35	PANTHER	PTHR45722	60S RIBOSOMAL PROTEIN L35	coord: 19..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G14454.1	Clc09G14454.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome