Clc09G11770 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G11770
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	GrpE protein homolog
Location	ClcChr09: 10479872 .. 10482558 (+)
RNA-Seq Expression	Clc09G11770
Synteny	Clc09G11770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTCAAAAGGAGGAGGGCAAATACGTAAAATCTAAAGCCACCGGGAGCCATCTTTCCGACCTGCCGCCTTCAGTTCCCCCAAAATAACTCCTCTCCTCCTCCGTCCGTATCCTCTGGTCGGAACTTCAGCCGTTGAGTCTCTGTAATCTTGAAGCATTTGATTCGCCGTTTCAATTTCTTCTTCTCAATGTCCGTCTCGAGAATCCTCTTCCGAGCTTCCAGGAGCCTTCCCCGGAGCTCGCCGATCCTATTTGGCCACCAAACTTTTCCGATTATCTACAGGCAGTTTCACGGTCTCCTTCATGAGATCTCCGGCAAGGTTGAGGTTCTAAAGCCGTGTTTTCAAAGGTTCTCTCCTCTGGGGTTTTAGTTAGGGTTTTTGCCATTGCATTGAGAAGGGCACTATTTAATTCTTACTTATCTTATGCCCCTTGTGAAAGCTTATTTGTTTTGGTTCCGATTGCGAAATCTTTTGTTTTATGCTCTTATTACTTACTCTCTGGGAGATCTTTGATTCTTGTTCAATTGGGTTTATAGAGAAGTACAGAGAATGTTTCATAACTAAATTGAAAATTTGAGAGGTGATTTGATATGGATATGGATGAACAATGAACTTGTGAAATTTTTGCTTGAATGTTGTTGATGTAGCATTGTCTATTTTAACATGTATTTGCATTTTTCATCATGTTTTTAACCTGCCCACTTTGCTTTGGTATTTTTGGTGAGTTTTTACTTACTTTTGGTATTATGCTTCCTCTTCCAGTCTGCTCCAGTTCAAGTGTCTTTACTAAATCATATAGTCGTTAATCCTTTCCCCTTCCAAAGATTTGGAGTATCCTCTACTGCTATCCATGAATCTTCTGAAAATGAAGAGGGAAAAGCCAAACAAAGTAATTGTGGTTCTACAAATAAAGATCCTTCAAAACATGGGAATTCTGAAGTTTCTGATCAAGCAGAAGAATCGAGTTTTACGTTAGATTCCCATTCCACCAAATCAAAGTCAAGACGACGGAGTAGGCGGACTTTACGAACTGCATTCTCTGATTCGGATTCCGAGAGTGATGAACAACCTTCCATGGATGATTTAGTAAAATCACTAGCACGGAAGGAAGAGCTTTTGAAGTCTAAGCACAAAGAGATTGAGAAAATGCAAGATAAAGTCCTCCGTTCTTATGCAGAAATGGAGAATGTTATGGACAGGACAAGACGTGAAGCAGAGAATTCAAAGAAGTTTGCCATTCAGGTTTCTTGATTGTTGTTGTCCTAATGCTATTAATTCTATGTCGAGTTTCATTCCGGTACTCATTTGTTTAACCATGAGCTTACGTGTGTTAACATATGCTTGACAGAATTTTGCAAAGAGTTTGCTTGATGTTGCCGACAACTTGGGAAGAGCTTCTTCTGTGGTTAAAGATAGTTTCTCAAAGATCAATGAATCGGAGGATTCAAGTGGAGCCGTACCTCTTCTAAAAACCCTTCTAGAAGGGGTCGATATGACTGAGAAACTGCTTATGGAGGTAAAATTTTCCATTTTGCATCAACTTTGCATAATTAGCATGGGCTATTCAACATTTCAAGATGAAAACCACAAGTTTTATCTGTTGTTCTGATGCTTAAAACACTTCTTCATCAGGTACTTAAGAAGTCTGGGGTAGAGAAATTTGACCCTACAAACGAGCCATTTGATCCGCATAAGCATTACGCTGTATTCCAAATACCGGATGGGTCTAAGCCAGACGGTACTGTTGCAATTGTCCTGAAGGTATTAGTTCAATTTGTAATCCTACAAATATCTCTAGAATTTGTCTACTTAAAAAATGGGTAGTTTGAAGATATTTAGTTCATATGCTAAGAAAAATTCATTGATCAAACTGGAAGGGGGAACTGTCTTTTAGACTAAGCTAGAAACAAAATTTAATAATTTTAAGCTTGGTTGTTAGGCCTGGGATTCATGCTTAGACGAAAATCTTTGGTCTAATGGGGTCTATGCCCTTCTCTAGAGGCTTCGGTTTGAAAGAAACTAAAGGATCTTTCATGACTATTATCTAAGCCAGGACTTCTTTTGGGATTTTGTTACTCTTTTTGCTTCTACTCGATCTTCTACCTCTAAATTCTTTTGTAATTATAGCCTTACTCATATCTACACCAGTTGGGCATCATTTTTGTAACTTGGTATGTGCGGATATCTCATCTCCCTCTCTTTTGTCTCCTCCTTTAGATAATGAAAGTTAAGTTTCTTATATAAAAAAAAAGGTTTGGTCGTTAGTAGGAGCAGCAAAGTTAATCCATTATAACAAATATTTGCCTTTAATATTTTCCAAGAACACGGGATGGTCACTGTTTAGTTTGGTTTGATGGACATTGCATTGGCTGTGGAGATGTATGATTTTCTCATGTTTTATATAACAGTCTGGATATATGCTACACGATCGAGTTCTTCGGCCAGCCGAGGTTGGTGTGACTCAAGCTGTGGAAAATAATTCGACTGATTAATGTCTAAAGAGATAGAAGCTGCTACGGAATGGTCCCAAGAATATGATTCTGCCGTCATTGGATTCTTCGAATTCTTCCCTATGACAGGAAATTATGCTGTATGAGGTGCTAAGCTAAGCAATGATTCTATCTTTCCAATTGAAATATTGAGATGATTAGAAGGAATATGTTGCCAGTTTCCATGATGTTATGT

mRNA sequence

GCTTCAAAAGGAGGAGGGCAAATACGTAAAATCTAAAGCCACCGGGAGCCATCTTTCCGACCTGCCGCCTTCAGTTCCCCCAAAATAACTCCTCTCCTCCTCCGTCCGTATCCTCTGGTCGGAACTTCAGCCGTTGAGTCTCTGTAATCTTGAAGCATTTGATTCGCCGTTTCAATTTCTTCTTCTCAATGTCCGTCTCGAGAATCCTCTTCCGAGCTTCCAGGAGCCTTCCCCGGAGCTCGCCGATCCTATTTGGCCACCAAACTTTTCCGATTATCTACAGGCAGTTTCACGGTCTCCTTCATGAGATCTCCGGCAAGGTTGAGGTTCTAAAGCCGTGTTTTCAAAGCTTATTTGTTTTGGTTCCGATTGCGAAATCTTTTGTTTTATGCTCTTATTACTTACTCTCTGGGAGATCTTTGATTCTTTCTGCTCCAGTTCAAGTGTCTTTACTAAATCATATAGTCGTTAATCCTTTCCCCTTCCAAAGATTTGGAGTATCCTCTACTGCTATCCATGAATCTTCTGAAAATGAAGAGGGAAAAGCCAAACAAAGTAATTGTGGTTCTACAAATAAAGATCCTTCAAAACATGGGAATTCTGAAGTTTCTGATCAAGCAGAAGAATCGAGTTTTACGTTAGATTCCCATTCCACCAAATCAAAGTCAAGACGACGGAGTAGGCGGACTTTACGAACTGCATTCTCTGATTCGGATTCCGAGAGTGATGAACAACCTTCCATGGATGATTTAGTAAAATCACTAGCACGGAAGGAAGAGCTTTTGAAGTCTAAGCACAAAGAGATTGAGAAAATGCAAGATAAAGTCCTCCGTTCTTATGCAGAAATGGAGAATGTTATGGACAGGACAAGACGTGAAGCAGAGAATTCAAAGAAGTTTGCCATTCAGAATTTTGCAAAGAGTTTGCTTGATGTTGCCGACAACTTGGGAAGAGCTTCTTCTGTGGTTAAAGATAGTTTCTCAAAGATCAATGAATCGGAGGATTCAAGTGGAGCCGTACCTCTTCTAAAAACCCTTCTAGAAGGGGTCGATATGACTGAGAAACTGCTTATGGAGGTACTTAAGAAGTCTGGGGTAGAGAAATTTGACCCTACAAACGAGCCATTTGATCCGCATAAGCATTACGCTGTATTCCAAATACCGGATGGGTCTAAGCCAGACGGTACTGTTGCAATTGTCCTGAAGTCTGGATATATGCTACACGATCGAGTTCTTCGGCCAGCCGAGGTTGGTGTGACTCAAGCTGTGGAAAATAATTCGACTGATTAATGTCTAAAGAGATAGAAGCTGCTACGGAATGGTCCCAAGAATATGATTCTGCCGTCATTGGATTCTTCGAATTCTTCCCTATGACAGGAAATTATGCTGTATGAGGTGCTAAGCTAAGCAATGATTCTATCTTTCCAATTGAAATATTGAGATGATTAGAAGGAATATGTTGCCAGTTTCCATGATGTTATGT

Coding sequence (CDS)

ATGTCCGTCTCGAGAATCCTCTTCCGAGCTTCCAGGAGCCTTCCCCGGAGCTCGCCGATCCTATTTGGCCACCAAACTTTTCCGATTATCTACAGGCAGTTTCACGGTCTCCTTCATGAGATCTCCGGCAAGGTTGAGGTTCTAAAGCCGTGTTTTCAAAGCTTATTTGTTTTGGTTCCGATTGCGAAATCTTTTGTTTTATGCTCTTATTACTTACTCTCTGGGAGATCTTTGATTCTTTCTGCTCCAGTTCAAGTGTCTTTACTAAATCATATAGTCGTTAATCCTTTCCCCTTCCAAAGATTTGGAGTATCCTCTACTGCTATCCATGAATCTTCTGAAAATGAAGAGGGAAAAGCCAAACAAAGTAATTGTGGTTCTACAAATAAAGATCCTTCAAAACATGGGAATTCTGAAGTTTCTGATCAAGCAGAAGAATCGAGTTTTACGTTAGATTCCCATTCCACCAAATCAAAGTCAAGACGACGGAGTAGGCGGACTTTACGAACTGCATTCTCTGATTCGGATTCCGAGAGTGATGAACAACCTTCCATGGATGATTTAGTAAAATCACTAGCACGGAAGGAAGAGCTTTTGAAGTCTAAGCACAAAGAGATTGAGAAAATGCAAGATAAAGTCCTCCGTTCTTATGCAGAAATGGAGAATGTTATGGACAGGACAAGACGTGAAGCAGAGAATTCAAAGAAGTTTGCCATTCAGAATTTTGCAAAGAGTTTGCTTGATGTTGCCGACAACTTGGGAAGAGCTTCTTCTGTGGTTAAAGATAGTTTCTCAAAGATCAATGAATCGGAGGATTCAAGTGGAGCCGTACCTCTTCTAAAAACCCTTCTAGAAGGGGTCGATATGACTGAGAAACTGCTTATGGAGGTACTTAAGAAGTCTGGGGTAGAGAAATTTGACCCTACAAACGAGCCATTTGATCCGCATAAGCATTACGCTGTATTCCAAATACCGGATGGGTCTAAGCCAGACGGTACTGTTGCAATTGTCCTGAAGTCTGGATATATGCTACACGATCGAGTTCTTCGGCCAGCCGAGGTTGGTGTGACTCAAGCTGTGGAAAATAATTCGACTGATTAA

Protein sequence

MSVSRILFRASRSLPRSSPILFGHQTFPIIYRQFHGLLHEISGKVEVLKPCFQSLFVLVPIAKSFVLCSYYLLSGRSLILSAPVQVSLLNHIVVNPFPFQRFGVSSTAIHESSENEEGKAKQSNCGSTNKDPSKHGNSEVSDQAEESSFTLDSHSTKSKSRRRSRRTLRTAFSDSDSESDEQPSMDDLVKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLLEGVDMTEKLLMEVLKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVGVTQAVENNSTD

Homology

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BLAST of Clc09G11770 vs. NCBI nr
Match: XP_038898199.1 (grpE protein homolog 2, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 538.9 bits (1387), Expect = 3.4e-149
Identity = 299/366 (81.69%), Postives = 315/366 (86.07%), Query Frame = 0


Query: 1   MSVSRILFRASRSLPRSSPILFGHQTFPIIYRQFHGLLHEISGKVEVLKPCFQSLFVLVP 60
           MSVSRILFRASRSL RSSPIL+G+QTFPI+YRQFHGL+HEISGK                
Sbjct: 39  MSVSRILFRASRSLHRSSPILYGYQTFPILYRQFHGLVHEISGK---------------- 98

Query: 61  IAKSFVLCSYYLLSGRSLILSAPVQVSLLNHIVVNPFPFQRFGVSSTAIHESSENEEGKA 120
                               SAPVQVSLLNHIV NPFPFQRFGVSSTAIHESSEN EG A
Sbjct: 99  --------------------SAPVQVSLLNHIVYNPFPFQRFGVSSTAIHESSEN-EGSA 158

Query: 121 KQSNCGSTNKDPSKHGNSEVSDQAEESSFTLDSHSTKSKSRRRSRRTLRTAFSDSDSESD 180
           K S  GSTN  P+KHGNSEVSD+AEES+FTLDSHSTKSKSRRRSRR++RTAFSDSDSESD
Sbjct: 159 KHS--GSTNNGPTKHGNSEVSDRAEESTFTLDSHSTKSKSRRRSRRSVRTAFSDSDSESD 218

Query: 181 EQPSMDDLVKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQ 240
           EQPSMDDLVKSLARKEELLKSKHKE+EKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQ
Sbjct: 219 EQPSMDDLVKSLARKEELLKSKHKELEKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQ 278

Query: 241 NFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLLEGVDMTEKLLMEVLKK 300
           NFAKSLLDVADNLGRASSVVKDSFSKINES+DSSGAVPLLK+LLEGVDMTEK LME   K
Sbjct: 279 NFAKSLLDVADNLGRASSVVKDSFSKINESQDSSGAVPLLKSLLEGVDMTEKQLMEAFTK 338

Query: 301 SGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVGVTQAV 360
            GVEKFDPT+EPFDPHKH+AVFQIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVGVTQA 
Sbjct: 339 FGVEKFDPTSEPFDPHKHFAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVGVTQAA 365

Query: 361 ENNSTD 367
           E+NST+
Sbjct: 399 EDNSTN 365

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BLAST of Clc09G11770 vs. NCBI nr
Match: XP_023536001.1 (grpE protein homolog 2, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 510.4 bits (1313), Expect = 1.3e-140
Identity = 289/368 (78.53%), Postives = 303/368 (82.34%), Query Frame = 0


Query: 1   MSVSRILFRASRSLPRSSPILFGHQ-----TFPIIYRQFHGLLHEISGKVEVLKPCFQSL 60
           MS S ILFRASRSL RSSPIL G+Q     TFPI+YRQFHGL+ EISGKVEVLKPCFQ  
Sbjct: 1   MSSSSILFRASRSLHRSSPILIGNQSQNCRTFPILYRQFHGLVDEISGKVEVLKPCFQGF 60

Query: 61  FVLVPIAKSFVLCSYYLLSGRSLILSAPVQVSLLNHIVVNPFPFQRFGVSSTAIHESSEN 120
                                 L  SAPV VSLLNHIV NPFPFQRFG+SSTA HESSEN
Sbjct: 61  ----------------------LFQSAPVHVSLLNHIVFNPFPFQRFGLSSTASHESSEN 120

Query: 121 EEGKAKQSNCGSTNKDPSKHGNSEVSDQAEESSFTLDSHSTKSKSRRRSRRTLRTAFSDS 180
           EE  AKQ              NSEVS+QAEE S T DSHSTKSKSRR+ RRT+RTAFS+S
Sbjct: 121 EERSAKQGTV-----------NSEVSNQAEELSSTTDSHSTKSKSRRQRRRTIRTAFSNS 180

Query: 181 DSESDEQPSMDDLVKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENVMDRTRREAENSK 240
           DSESDEQPSMDDLVKSL RKEELLKSKHKEIEKMQ+KVL SYAEMENVMDRT+REAENSK
Sbjct: 181 DSESDEQPSMDDLVKSLTRKEELLKSKHKEIEKMQEKVLCSYAEMENVMDRTKREAENSK 240

Query: 241 KFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLLEGVDMTEKLLM 300
           KFAIQNFAKSLLDVADNLGRASSVVKDSFSKI+ESED SGAV LLKTLLEGVDMTEK LM
Sbjct: 241 KFAIQNFAKSLLDVADNLGRASSVVKDSFSKIDESEDPSGAVALLKTLLEGVDMTEKQLM 300

Query: 301 EVLKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVG 360
           EV KKSGVEKFDPT+EPFDPHKHYAVFQIPDGSKPDGTVA+VLKSGYMLHDRVLRPAEVG
Sbjct: 301 EVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDGSKPDGTVAVVLKSGYMLHDRVLRPAEVG 335

Query: 361 VTQAVENN 364
           VTQAVE+N
Sbjct: 361 VTQAVEDN 335

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BLAST of Clc09G11770 vs. NCBI nr
Match: KAG7024936.1 (grpE, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 499.6 bits (1285), Expect = 2.3e-137
Identity = 285/371 (76.82%), Postives = 300/371 (80.86%), Query Frame = 0


Query: 1   MSVSRILFRASRSLPRSSPILFGHQ-----TFPIIYRQFHGLLHEISGKVEVLKPCFQSL 60
           MS  RILFRASRSL +SSPIL G+Q     TFPI+YRQFHGL+ EISGKVE         
Sbjct: 1   MSSFRILFRASRSLHQSSPILIGNQSQNCRTFPILYRQFHGLVDEISGKVE--------- 60

Query: 61  FVLVPIAKSFVLCSYYLLSGRSLILSAPVQVSLLNHIVVNPFPFQRFGVSSTAIHESSEN 120
                                    SAPV VSLLNHIV NPFPFQR GVSSTA HESSEN
Sbjct: 61  -------------------------SAPVHVSLLNHIVSNPFPFQRLGVSSTASHESSEN 120

Query: 121 EEGKAKQSNCGSTNKDPSKHGNSEVSDQAEESSFTLDSHSTKSKSRRRSRRTLRTAFSDS 180
           EEG AKQ N            NSEVS+QAEE S T DSHSTKSKSRR+ RRT+RTAFS+S
Sbjct: 121 EEGSAKQDNV-----------NSEVSNQAEELSSTTDSHSTKSKSRRQRRRTIRTAFSES 180

Query: 181 DSESDEQPSMDDLVKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENVMDRTRREAENSK 240
           DSESDEQPSMDDLVKSLARKEELLKSKHKEI+KMQ+KVL SYAEMENVMDRT+REAENSK
Sbjct: 181 DSESDEQPSMDDLVKSLARKEELLKSKHKEIDKMQEKVLCSYAEMENVMDRTKREAENSK 240

Query: 241 KFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLLEGVDMTEKLLM 300
           KFAIQNFAKSLLDVADNLGRASSVVKDSFSKI+ESED SGAV LLKTLLEGVDMTEK LM
Sbjct: 241 KFAIQNFAKSLLDVADNLGRASSVVKDSFSKIDESEDPSGAVALLKTLLEGVDMTEKQLM 300

Query: 301 EVLKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVG 360
           EV KKSGVEKFDPT+EPFDPHKHYAVFQIPDGSKPDGTVA+VLKSGYMLHDRVLRPAEVG
Sbjct: 301 EVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDGSKPDGTVAVVLKSGYMLHDRVLRPAEVG 326

Query: 361 VTQAVENNSTD 367
           VTQAVE+NSTD
Sbjct: 361 VTQAVEDNSTD 326

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BLAST of Clc09G11770 vs. NCBI nr
Match: KAG6592058.1 (Transcriptional adapter ADA2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 494.6 bits (1272), Expect = 7.4e-136
Identity = 283/371 (76.28%), Postives = 298/371 (80.32%), Query Frame = 0


Query: 1   MSVSRILFRASRSLPRSSPILFGHQ-----TFPIIYRQFHGLLHEISGKVEVLKPCFQSL 60
           MS  RILFRASRSL +SSPIL G+Q     TFPI+YRQFHGL+ EISGK           
Sbjct: 587 MSSFRILFRASRSLHQSSPILIGNQSQNCRTFPILYRQFHGLVDEISGK----------- 646

Query: 61  FVLVPIAKSFVLCSYYLLSGRSLILSAPVQVSLLNHIVVNPFPFQRFGVSSTAIHESSEN 120
                                    SAPV VSLLNHIV NPFPFQR GVSSTA HESSEN
Sbjct: 647 -------------------------SAPVHVSLLNHIVSNPFPFQRLGVSSTASHESSEN 706

Query: 121 EEGKAKQSNCGSTNKDPSKHGNSEVSDQAEESSFTLDSHSTKSKSRRRSRRTLRTAFSDS 180
           EEG AKQ N            NSEVS+QAEE S T DSHSTKSKSRR+ RRT+RTAFSDS
Sbjct: 707 EEGSAKQDNV-----------NSEVSNQAEELSSTTDSHSTKSKSRRQRRRTIRTAFSDS 766

Query: 181 DSESDEQPSMDDLVKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENVMDRTRREAENSK 240
           DSES+EQPSMDDLVKSLARKEELLKSKHKEI+KMQ+KVL SYAEMENVMDRT+REAENSK
Sbjct: 767 DSESNEQPSMDDLVKSLARKEELLKSKHKEIDKMQEKVLCSYAEMENVMDRTKREAENSK 826

Query: 241 KFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLLEGVDMTEKLLM 300
           KFAIQNFAKSLLDVADNLGRASSVVKDSFSKI+ESED SGAV LLKTLLEGVDMTEK LM
Sbjct: 827 KFAIQNFAKSLLDVADNLGRASSVVKDSFSKIDESEDPSGAVALLKTLLEGVDMTEKQLM 886

Query: 301 EVLKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVG 360
           EV KKSGVEKFDPT+EPFDPHKHYAVFQIPDGSKPDGTVA+VLKSGYMLHDRVLRPAEVG
Sbjct: 887 EVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDGSKPDGTVAVVLKSGYMLHDRVLRPAEVG 910

Query: 361 VTQAVENNSTD 367
           VTQAVE+NSTD
Sbjct: 947 VTQAVEDNSTD 910

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BLAST of Clc09G11770 vs. NCBI nr
Match: XP_022936267.1 (grpE protein homolog 2, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 490.3 bits (1261), Expect = 1.4e-134
Identity = 282/371 (76.01%), Postives = 296/371 (79.78%), Query Frame = 0


Query: 1   MSVSRILFRASRSLPRSSPILFGHQ-----TFPIIYRQFHGLLHEISGKVEVLKPCFQSL 60
           MS  RIL RASRSL +SSPIL  +Q     TFPI+YRQFHGL+ EISGK           
Sbjct: 1   MSSFRILVRASRSLHQSSPILIRNQSQNCRTFPILYRQFHGLVDEISGK----------- 60

Query: 61  FVLVPIAKSFVLCSYYLLSGRSLILSAPVQVSLLNHIVVNPFPFQRFGVSSTAIHESSEN 120
                                    SAPV VSLLNHIV NPFPFQRFGVSSTA HESSEN
Sbjct: 61  -------------------------SAPVHVSLLNHIVSNPFPFQRFGVSSTASHESSEN 120

Query: 121 EEGKAKQSNCGSTNKDPSKHGNSEVSDQAEESSFTLDSHSTKSKSRRRSRRTLRTAFSDS 180
           EEG AKQ +            NSEVS+QAEE S T DSHSTKSKSRR+ RRT+RTAFSDS
Sbjct: 121 EEGSAKQDDV-----------NSEVSNQAEELSSTTDSHSTKSKSRRQRRRTIRTAFSDS 180

Query: 181 DSESDEQPSMDDLVKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENVMDRTRREAENSK 240
           DSE DEQPSMDDLVKSLARKEELLKSKHKEIEKMQ+KVL SYAEMENVMDRT+REAENSK
Sbjct: 181 DSECDEQPSMDDLVKSLARKEELLKSKHKEIEKMQEKVLCSYAEMENVMDRTKREAENSK 240

Query: 241 KFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLLEGVDMTEKLLM 300
           KFAIQNFAKSLLDVADNLGRASSVVKDSFSKI+ESED SGAV LLKTLLEGVDMTEK LM
Sbjct: 241 KFAIQNFAKSLLDVADNLGRASSVVKDSFSKIDESEDPSGAVALLKTLLEGVDMTEKQLM 300

Query: 301 EVLKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVG 360
           EV KKSGVEKFDPT+EPFDPHKHYAVFQIPDGSKPDGTVA+VLKSGYMLHDRVLRPAEVG
Sbjct: 301 EVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDGSKPDGTVAVVLKSGYMLHDRVLRPAEVG 324

Query: 361 VTQAVENNSTD 367
           VTQAVE+NSTD
Sbjct: 361 VTQAVEDNSTD 324

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BLAST of Clc09G11770 vs. ExPASy Swiss-Prot
Match: Q8LB47 (GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge2 PE=1 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 7.6e-75
Identity = 180/367 (49.05%), Postives = 233/367 (63.49%), Query Frame = 0


Query: 1   MSVSRILFRASRSL----PRSSPILFGHQTFPIIYRQFHGLLHEISGKVEVLKPCFQSLF 60
           M V RIL R +R+       S+  L      P+   +FH L H+ S K+           
Sbjct: 1   MLVLRILSRVTRNAGIRSSLSAVTLPARNQTPVFSSRFHSLAHDFSHKL----------- 60

Query: 61  VLVPIAKSFVLCSYYLLSGRSLILSAPVQVSLLNHIVVNPFPFQRFGVSSTAIHESSENE 120
                                     P Q+S++     + F  QRF  SS+    S E++
Sbjct: 61  -------------------------VPAQMSMM-----DSFALQRFNFSSST---SPESD 120

Query: 121 EGKAKQSNCGSTNKDPSKHGNSEVSDQAEESSFTLDSHSTKSKSRRRSRRTLRTAFSDSD 180
           E K       ++ + P+   N    D     S + DS +  +K +R+  +   ++ S+SD
Sbjct: 121 EKKTHTEASKTSEEKPTAEANQPGLD-----SESKDSVTDSAKRKRKGAKGAASSSSESD 180

Query: 181 SES-DEQPSMDDLVKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENVMDRTRREAENSK 240
           SES D++ S DDLVK +A KEELL  K +EI++++DKVLR+YAEMENVMDRTRR+AEN+K
Sbjct: 181 SESDDDELSADDLVKLVAEKEELLSEKEEEIKQLKDKVLRTYAEMENVMDRTRRDAENTK 240

Query: 241 KFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLLEGVDMTEKLLM 300
           K+A+QNFAKSLLDVADNLGRASSVVK+SFSK++ SEDS+GA PLLKTLLEGV+MTEK L 
Sbjct: 241 KYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDSAGAAPLLKTLLEGVEMTEKQLA 300

Query: 301 EVLKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVG 360
           EV KK G+EK+DP NEPFDP++H AVFQ+PD SKP+GTVA VLKSGY L+DRV+RPAEVG
Sbjct: 301 EVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTVAHVLKSGYTLYDRVIRPAEVG 318

Query: 361 VTQAVEN 363
           VTQ  EN
Sbjct: 361 VTQGGEN 318

[Close]

BLAST of Clc09G11770 vs. ExPASy Swiss-Prot
Match: Q9FLP3 (GrpE protein homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge1 PE=2 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.4e-60
Identity = 147/280 (52.50%), Postives = 184/280 (65.71%), Query Frame = 0


Query: 84  VQVSLLNHIVVNPFPFQRFGVSSTAIHESSENEEGKAKQSNCGSTNKDPSKHGNSEVSDQ 143
           V VSL NH  ++    QRFG  S++  E   NE           +N +  K G  E S+ 
Sbjct: 52  VPVSLRNHGTLDLNVLQRFGFFSSSSAEPKGNE-----------SNTEVPKTG--ETSEN 111

Query: 144 AEESSFTLDSHSTKSKSRRRSRRTLRTAFSDSDSESD-EQPSMDDLVKSLARKEELLKSK 203
            E    T                         D+E D +  S DDLVK ++ KE+LLK +
Sbjct: 112 VEVGKAT-------------------------DAEIDFDDLSRDDLVKLVSEKEDLLKVQ 171

Query: 204 HKEIEKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKD 263
            K+I +M+DK LR+YAE +N+MDRT R AE++KKFA+QNFA SLLDVADNL RASSVVK+
Sbjct: 172 QKDIMEMKDKFLRTYAEQQNLMDRTNRNAESAKKFAVQNFATSLLDVADNLERASSVVKE 231

Query: 264 SFSKINESEDSSGAVPLLKTLLEGVDMTEKLLMEVLKKSGVEKFDPTNEPFDPHKHYAVF 323
           SFSKI+ S+D +GA PLLK LLEGV+MTEK L EV +K+G+ K DP NEPF+P++H AVF
Sbjct: 232 SFSKIDTSKDLAGATPLLKNLLEGVEMTEKQLAEVFRKAGLVKEDPLNEPFNPNRHNAVF 291

Query: 324 QIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVGVTQAVEN 363
           Q+PD SKP GT+A VLKSGY L+DRV+RPAEVGVT AVEN
Sbjct: 292 QVPDASKPKGTIAHVLKSGYSLYDRVIRPAEVGVTCAVEN 293

[Close]

BLAST of Clc09G11770 vs. ExPASy Swiss-Prot
Match: A4YJR1 (Protein GrpE OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=grpE PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 9.7e-30
Identity = 70/155 (45.16%), Postives = 107/155 (69.03%), Query Frame = 0


Query: 204 KEIEKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDS 263
           KE  + +DK+LR+ AEMEN+  RT RE  +++ + I  FA+ +LD+ADNL RA   V   
Sbjct: 42  KEAAEARDKMLRTLAEMENLRKRTAREVADARMYGITGFARDVLDIADNLQRALDAV--- 101

Query: 264 FSKINESEDSSGAVPLLKTLLEGVDMTEKLLMEVLKKSGVEKFDPTNEPFDPHKHYAVFQ 323
                 +E  + A   LK+L+EGV++TE+ L+  L+K+GV+KFDPT + FDP+   A+++
Sbjct: 102 -----PAETRANADAGLKSLIEGVELTERSLLNTLEKNGVKKFDPTGQKFDPNFQQAMYE 161

Query: 324 IPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVGVTQ 359
           +PD S P GTV  V+++G+M+ +RVLRPA VGV++
Sbjct: 162 VPDPSVPSGTVVQVVQAGFMIGERVLRPALVGVSK 188

[Close]

BLAST of Clc09G11770 vs. ExPASy Swiss-Prot
Match: B6JCI1 (Protein GrpE OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) OX=504832 GN=grpE PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 9.7e-30
Identity = 71/156 (45.51%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 204 KEIEKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDS 263
           KE  + +D++LR+ AEMEN+  RT+RE  +++ + I  FA+ +L++ADNL RA   V   
Sbjct: 47  KEAAEAKDRMLRTLAEMENLRKRTQREVADARAYGIAGFARDVLEIADNLQRALDAV--- 106

Query: 264 FSKINESEDSSGAVPLLKTLLEGVDMTEKLLMEVLKKSGVEKFDPTNEPFDPHKHYAVFQ 323
                 +E  + A P L  L+EGV++TE+ L   L+K+GV+K D   E FDP+ H A+F+
Sbjct: 107 -----PAEARAAADPGLTALIEGVELTERSLHRALEKNGVKKLDAAGEKFDPNIHQAMFE 166

Query: 324 IPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVGVTQA 360
           +PD S P GTV  V+++GYM+ DRVLRPA VGV++A
Sbjct: 167 VPDNSVPPGTVVQVIQTGYMIGDRVLRPALVGVSKA 194

[Close]

BLAST of Clc09G11770 vs. ExPASy Swiss-Prot
Match: Q3SW78 (Protein GrpE OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=grpE PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.8e-29
Identity = 76/195 (38.97%), Postives = 121/195 (62.05%), Query Frame = 0


Query: 173 SDSDSESDEQPSMDDLVKSLARK---------EELLKSKHKEIEKMQDKVLRSYAEMENV 232
           +DSD ++D+       V+ +  K         ++ L + +K++ + +D+ LR+ AEMEN+
Sbjct: 2   TDSDGKTDKSGEPAAEVEPVVSKPYVMPDDPEDDALDALNKQLAEAKDRTLRTLAEMENL 61

Query: 233 MDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTL 292
             RT RE  +++ + I  FA+ +L++ADNL RA   V         ++  +   P LK L
Sbjct: 62  RKRTAREVSDARTYGISGFARDVLEIADNLQRALDAV--------PADARAAPDPGLKAL 121

Query: 293 LEGVDMTEKLLMEVLKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYM 352
           +EGV++TE+ L   L+K GV+KFDP  E FDP+ H A++++PD S P GTVA V+++GYM
Sbjct: 122 IEGVELTERSLHNALEKHGVKKFDPAGEKFDPNVHQAMYEVPDPSIPVGTVAQVIQAGYM 181

Query: 353 LHDRVLRPAEVGVTQ 359
           + +RVLRPA VGV +
Sbjct: 182 IGERVLRPALVGVAK 188

[Close]

BLAST of Clc09G11770 vs. ExPASy TrEMBL
Match: A0A6J1F7Z2 (GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111442938 PE=3 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 6.8e-135
Identity = 282/371 (76.01%), Postives = 296/371 (79.78%), Query Frame = 0


Query: 1   MSVSRILFRASRSLPRSSPILFGHQ-----TFPIIYRQFHGLLHEISGKVEVLKPCFQSL 60
           MS  RIL RASRSL +SSPIL  +Q     TFPI+YRQFHGL+ EISGK           
Sbjct: 1   MSSFRILVRASRSLHQSSPILIRNQSQNCRTFPILYRQFHGLVDEISGK----------- 60

Query: 61  FVLVPIAKSFVLCSYYLLSGRSLILSAPVQVSLLNHIVVNPFPFQRFGVSSTAIHESSEN 120
                                    SAPV VSLLNHIV NPFPFQRFGVSSTA HESSEN
Sbjct: 61  -------------------------SAPVHVSLLNHIVSNPFPFQRFGVSSTASHESSEN 120

Query: 121 EEGKAKQSNCGSTNKDPSKHGNSEVSDQAEESSFTLDSHSTKSKSRRRSRRTLRTAFSDS 180
           EEG AKQ +            NSEVS+QAEE S T DSHSTKSKSRR+ RRT+RTAFSDS
Sbjct: 121 EEGSAKQDDV-----------NSEVSNQAEELSSTTDSHSTKSKSRRQRRRTIRTAFSDS 180

Query: 181 DSESDEQPSMDDLVKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENVMDRTRREAENSK 240
           DSE DEQPSMDDLVKSLARKEELLKSKHKEIEKMQ+KVL SYAEMENVMDRT+REAENSK
Sbjct: 181 DSECDEQPSMDDLVKSLARKEELLKSKHKEIEKMQEKVLCSYAEMENVMDRTKREAENSK 240

Query: 241 KFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLLEGVDMTEKLLM 300
           KFAIQNFAKSLLDVADNLGRASSVVKDSFSKI+ESED SGAV LLKTLLEGVDMTEK LM
Sbjct: 241 KFAIQNFAKSLLDVADNLGRASSVVKDSFSKIDESEDPSGAVALLKTLLEGVDMTEKQLM 300

Query: 301 EVLKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVG 360
           EV KKSGVEKFDPT+EPFDPHKHYAVFQIPDGSKPDGTVA+VLKSGYMLHDRVLRPAEVG
Sbjct: 301 EVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDGSKPDGTVAVVLKSGYMLHDRVLRPAEVG 324

Query: 361 VTQAVENNSTD 367
           VTQAVE+NSTD
Sbjct: 361 VTQAVEDNSTD 324

[Close]

BLAST of Clc09G11770 vs. ExPASy TrEMBL
Match: A0A6J1CCY7 (GrpE protein homolog OS=Momordica charantia OX=3673 GN=LOC111010351 PE=3 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 1.2e-126
Identity = 269/367 (73.30%), Postives = 290/367 (79.02%), Query Frame = 0


Query: 1   MSVSRILFRAS-RSLPRSSPILFGHQTFPIIYRQFHGLLHEISGKVEVLKPCFQSLFVLV 60
           MSVSR+LFRAS RSL RSSPIL          +QF GL+HE SGK               
Sbjct: 1   MSVSRVLFRASTRSLRRSSPIL---------SKQFRGLVHETSGKF-------------- 60

Query: 61  PIAKSFVLCSYYLLSGRSLILSAPVQVSLLNHIVVNPFPFQRFGVSSTAIHESSENEEGK 120
                                 APVQVSLL+HIV NPFPFQ+FG+SST  HESSEN+EG 
Sbjct: 61  ----------------------APVQVSLLHHIVFNPFPFQKFGISSTTSHESSENKEGS 120

Query: 121 AKQSNCGSTNKDPSKHGNSEVSDQAEESSFTLDSHSTKSKSRRRSRRTLRTAFSDSDSES 180
           AKQS   ST KDP+K  NSEVSDQA E + T +SHSTKSKSR+  RRT+RTAFSDSDSE 
Sbjct: 121 AKQSKNYSTTKDPTKDENSEVSDQAGELNSTSNSHSTKSKSRQWRRRTIRTAFSDSDSEG 180

Query: 181 DEQPSMDDLVKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENVMDRTRREAENSKKFAI 240
            EQPSMDDLVKSLARKEELLKSKHKEI+KMQDKVLRSYAEMENV DRTRREAENSKKFAI
Sbjct: 181 CEQPSMDDLVKSLARKEELLKSKHKEIKKMQDKVLRSYAEMENVKDRTRREAENSKKFAI 240

Query: 241 QNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLLEGVDMTEKLLMEVLK 300
           QNFAKSLLDVADNLGRASSVVKDSFSKI ESEDSSGAVPLLKTLLEGVDMTEK L++V K
Sbjct: 241 QNFAKSLLDVADNLGRASSVVKDSFSKIKESEDSSGAVPLLKTLLEGVDMTEKQLVQVFK 300

Query: 301 KSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVGVTQA 360
           KSGVEKFDPT+EPFDPH+H AVFQI DGSKPDGTVAIVLKSGYML+DRVLRPAEVGVT+A
Sbjct: 301 KSGVEKFDPTSEPFDPHRHNAVFQISDGSKPDGTVAIVLKSGYMLYDRVLRPAEVGVTRA 322

Query: 361 VENNSTD 367
            E+N +D
Sbjct: 361 AESNPSD 322

[Close]

BLAST of Clc09G11770 vs. ExPASy TrEMBL
Match: A0A2P5F264 (GrpE nucleotide exchange factor OS=Trema orientale OX=63057 GN=TorRG33x02_122180 PE=3 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 9.0e-95
Identity = 222/378 (58.73%), Postives = 258/378 (68.25%), Query Frame = 0


Query: 1   MSVSRILFRASRSLPRSSPILFGH---QTFPIIYRQFHGLLHEISGKVEVLKPCFQSLFV 60
           M  SR+L R SR++PRSS +L         P +  Q H L+HE + K+            
Sbjct: 35  MLASRVLARVSRTIPRSSSLLLSSPPTHHLPSLSNQLHSLVHESANKL------------ 94

Query: 61  LVPIAKSFVLCSYYLLSGRSLILSAPVQVSLLNHIVVNPFPFQRFGVSSTAIHESSENEE 120
                                    P QVSL +   ++  PFQRFG +S+A  E SE E 
Sbjct: 95  ------------------------VPSQVSLFH---LSSSPFQRFGYASSASPEPSEKEH 154

Query: 121 GKAKQSNCGS--TNKD-------PSKHGNSEVSDQAEESSFTLDSHSTKSKSRRRSRRTL 180
           G+  ++N  S  TN D        S  G S+V+DQ +ES    D  S  +K RRR   T 
Sbjct: 155 GRNSENNGDSPKTNGDAKESQTEDSASGQSDVADQTKESGSVSDFQSHTAKRRRRG--TK 214

Query: 181 RTAFSDSDSESDEQPSMDDLVKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENVMDRTR 240
           RTAFSDSDSE D   +MDDLVK +A KEELLKSKHKEIEKMQDKVLRSYAEMENVM+RTR
Sbjct: 215 RTAFSDSDSEED--LTMDDLVKLVAEKEELLKSKHKEIEKMQDKVLRSYAEMENVMERTR 274

Query: 241 REAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLLEGVD 300
           REAENSKKFAIQNFAKSLLDVADNLGRASSVVK+SFSKI+ S+DS+GAVPLLKTLLEGV+
Sbjct: 275 REAENSKKFAIQNFAKSLLDVADNLGRASSVVKESFSKIDTSKDSAGAVPLLKTLLEGVE 334

Query: 301 MTEKLLMEVLKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRV 360
           MTEK L+EV KK GVEK+DP NEPFDPH+H A FQIPD SKP GTVA+VLK GYML+DRV
Sbjct: 335 MTEKQLIEVFKKYGVEKYDPINEPFDPHRHNAAFQIPDPSKPSGTVAVVLKPGYMLYDRV 369

Query: 361 LRPAEVGVTQAVENNSTD 367
           +RPAEVGVTQAVEN++ D
Sbjct: 395 IRPAEVGVTQAVENDAAD 369

[Close]

BLAST of Clc09G11770 vs. ExPASy TrEMBL
Match: M5WTU3 (GrpE protein homolog OS=Prunus persica OX=3760 GN=PRUPE_4G223200 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 1.2e-94
Identity = 215/370 (58.11%), Postives = 259/370 (70.00%), Query Frame = 0


Query: 1   MSVSRILFRASRSLPRSSPILFGHQT--FPIIYRQFHGLLHEISGKVEVLKPCFQSLFVL 60
           M VSR+L RASR+LPRS+ ++   Q    PI+  Q   L+H+ S                
Sbjct: 1   MFVSRVLSRASRTLPRSTMLIAAPQNHHLPILCNQSQALIHDFS---------------- 60

Query: 61  VPIAKSFVLCSYYLLSGRSLILSAPVQVSLLNHIVVNPFPFQRFGVSSTAIHESSENEEG 120
                               I  +P QVSLL+H   +    Q FG SS+A  + SE E G
Sbjct: 61  --------------------IKFSPRQVSLLHHSTPSSSISQIFGFSSSASPQPSEREHG 120

Query: 121 KAKQSNCGSTNKDPSKH-GNSEVSDQAEESSFTLDSHSTKSKS-RRRSRRTLRTAFSDSD 180
            A ++   STN +P+K  G+++VSDQ +ES +T DS S KS S +RR   T RTAFSDSD
Sbjct: 121 SAAENGGASTNGEPAKESGDAKVSDQTKESGYTSDSQSKKSPSVKRRRGGTKRTAFSDSD 180

Query: 181 SESDEQPSMDDLVKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENVMDRTRREAENSKK 240
           SE +     DDLVK +A KEELLK KH+EI++MQDKVLRSYAEMENVMDRTRREAENSKK
Sbjct: 181 SEGEGDLGFDDLVKLVAEKEELLKQKHEEIKRMQDKVLRSYAEMENVMDRTRREAENSKK 240

Query: 241 FAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLLEGVDMTEKLLME 300
           FA+QNFAKSLLDVADNLGRASSVVKDSFSK++ES++S GA PLLKTLLEGV+MTEK L+E
Sbjct: 241 FAVQNFAKSLLDVADNLGRASSVVKDSFSKLDESKESGGAAPLLKTLLEGVEMTEKQLIE 300

Query: 301 VLKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVGV 360
           V +K GVEKFDPTNE FDP+KH AVF + D SKP GT+A+VLK GYML+DRV+RPAEVGV
Sbjct: 301 VFRKYGVEKFDPTNEAFDPNKHNAVFNLEDASKPPGTIAVVLKPGYMLYDRVVRPAEVGV 334

Query: 361 TQAVENNSTD 367
           T A ENN+T+
Sbjct: 361 TTAPENNATE 334

[Close]

BLAST of Clc09G11770 vs. ExPASy TrEMBL
Match: A0A5E4FCQ4 (GrpE protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B019776 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 1.2e-94
Identity = 215/370 (58.11%), Postives = 259/370 (70.00%), Query Frame = 0


Query: 1   MSVSRILFRASRSLPRSSPILFGHQT--FPIIYRQFHGLLHEISGKVEVLKPCFQSLFVL 60
           M VSR+L RASR+LPRS+ ++   Q    PI+  Q   L+H+ S                
Sbjct: 1   MFVSRVLSRASRTLPRSTMLIAAPQNHHLPILCNQSQALIHDFS---------------- 60

Query: 61  VPIAKSFVLCSYYLLSGRSLILSAPVQVSLLNHIVVNPFPFQRFGVSSTAIHESSENEEG 120
                               I  +P QVSLL+H   +    Q FG SS+A  + SE E G
Sbjct: 61  --------------------IKFSPRQVSLLHHSTPSSSISQIFGFSSSASPQPSEREHG 120

Query: 121 KAKQSNCGSTNKDPSKH-GNSEVSDQAEESSFTLDSHSTKSKS-RRRSRRTLRTAFSDSD 180
            A ++   STN +P+K  G+++VSDQ +ES +T DS S KS S +RR   T RTAFSDSD
Sbjct: 121 SAAENGGASTNGEPAKESGDAKVSDQTKESGYTSDSQSKKSPSVKRRRGGTKRTAFSDSD 180

Query: 181 SESDEQPSMDDLVKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENVMDRTRREAENSKK 240
           SE +     DDLVK +A KEELLK KH+EI++MQDKVLRSYAEMENVMDRTRREAENSKK
Sbjct: 181 SEGEGDLGFDDLVKLVAEKEELLKQKHEEIKRMQDKVLRSYAEMENVMDRTRREAENSKK 240

Query: 241 FAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLLEGVDMTEKLLME 300
           FA+QNFAKSLLDVADNLGRASSVVKDSFSK++ES++S GA PLLKTLLEGV+MTEK L+E
Sbjct: 241 FAVQNFAKSLLDVADNLGRASSVVKDSFSKLDESKESGGAAPLLKTLLEGVEMTEKQLIE 300

Query: 301 VLKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVGV 360
           V +K GVEKFDPTNE FDP+KH AVF + D SKP GT+A+VLK GYML+DRV+RPAEVGV
Sbjct: 301 VFRKYGVEKFDPTNEAFDPNKHNAVFNLEDASKPPGTIAVVLKPGYMLYDRVVRPAEVGV 334

Query: 361 TQAVENNSTD 367
           T A ENN+T+
Sbjct: 361 TTAPENNATE 334

[Close]

BLAST of Clc09G11770 vs. TAIR 10
Match: AT4G26780.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 282.3 bits (721), Expect = 5.4e-76
Identity = 180/367 (49.05%), Postives = 233/367 (63.49%), Query Frame = 0


Query: 1   MSVSRILFRASRSL----PRSSPILFGHQTFPIIYRQFHGLLHEISGKVEVLKPCFQSLF 60
           M V RIL R +R+       S+  L      P+   +FH L H+ S K+           
Sbjct: 1   MLVLRILSRVTRNAGIRSSLSAVTLPARNQTPVFSSRFHSLAHDFSHKL----------- 60

Query: 61  VLVPIAKSFVLCSYYLLSGRSLILSAPVQVSLLNHIVVNPFPFQRFGVSSTAIHESSENE 120
                                     P Q+S++     + F  QRF  SS+    S E++
Sbjct: 61  -------------------------VPAQMSMM-----DSFALQRFNFSSST---SPESD 120

Query: 121 EGKAKQSNCGSTNKDPSKHGNSEVSDQAEESSFTLDSHSTKSKSRRRSRRTLRTAFSDSD 180
           E K       ++ + P+   N    D     S + DS +  +K +R+  +   ++ S+SD
Sbjct: 121 EKKTHTEASKTSEEKPTAEANQPGLD-----SESKDSVTDSAKRKRKGAKGAASSSSESD 180

Query: 181 SES-DEQPSMDDLVKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENVMDRTRREAENSK 240
           SES D++ S DDLVK +A KEELL  K +EI++++DKVLR+YAEMENVMDRTRR+AEN+K
Sbjct: 181 SESDDDELSADDLVKLVAEKEELLSEKEEEIKQLKDKVLRTYAEMENVMDRTRRDAENTK 240

Query: 241 KFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLLEGVDMTEKLLM 300
           K+A+QNFAKSLLDVADNLGRASSVVK+SFSK++ SEDS+GA PLLKTLLEGV+MTEK L 
Sbjct: 241 KYAVQNFAKSLLDVADNLGRASSVVKESFSKLDTSEDSAGAAPLLKTLLEGVEMTEKQLA 300

Query: 301 EVLKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVG 360
           EV KK G+EK+DP NEPFDP++H AVFQ+PD SKP+GTVA VLKSGY L+DRV+RPAEVG
Sbjct: 301 EVFKKFGMEKYDPINEPFDPNRHNAVFQVPDASKPEGTVAHVLKSGYTLYDRVIRPAEVG 318

Query: 361 VTQAVEN 363
           VTQ  EN
Sbjct: 361 VTQGGEN 318

[Close]

BLAST of Clc09G11770 vs. TAIR 10
Match: AT5G55200.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 235.0 bits (598), Expect = 9.9e-62
Identity = 147/280 (52.50%), Postives = 184/280 (65.71%), Query Frame = 0


Query: 84  VQVSLLNHIVVNPFPFQRFGVSSTAIHESSENEEGKAKQSNCGSTNKDPSKHGNSEVSDQ 143
           V VSL NH  ++    QRFG  S++  E   NE           +N +  K G  E S+ 
Sbjct: 52  VPVSLRNHGTLDLNVLQRFGFFSSSSAEPKGNE-----------SNTEVPKTG--ETSEN 111

Query: 144 AEESSFTLDSHSTKSKSRRRSRRTLRTAFSDSDSESD-EQPSMDDLVKSLARKEELLKSK 203
            E    T                         D+E D +  S DDLVK ++ KE+LLK +
Sbjct: 112 VEVGKAT-------------------------DAEIDFDDLSRDDLVKLVSEKEDLLKVQ 171

Query: 204 HKEIEKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKD 263
            K+I +M+DK LR+YAE +N+MDRT R AE++KKFA+QNFA SLLDVADNL RASSVVK+
Sbjct: 172 QKDIMEMKDKFLRTYAEQQNLMDRTNRNAESAKKFAVQNFATSLLDVADNLERASSVVKE 231

Query: 264 SFSKINESEDSSGAVPLLKTLLEGVDMTEKLLMEVLKKSGVEKFDPTNEPFDPHKHYAVF 323
           SFSKI+ S+D +GA PLLK LLEGV+MTEK L EV +K+G+ K DP NEPF+P++H AVF
Sbjct: 232 SFSKIDTSKDLAGATPLLKNLLEGVEMTEKQLAEVFRKAGLVKEDPLNEPFNPNRHNAVF 291

Query: 324 QIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVGVTQAVEN 363
           Q+PD SKP GT+A VLKSGY L+DRV+RPAEVGVT AVEN
Sbjct: 292 QVPDASKPKGTIAHVLKSGYSLYDRVIRPAEVGVTCAVEN 293

[Close]

BLAST of Clc09G11770 vs. TAIR 10
Match: AT5G17710.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 50.4 bits (119), Expect = 3.5e-06
Identity = 48/187 (25.67%), Postives = 83/187 (44.39%), Query Frame = 0


Query: 175 SDSESDEQPSMDDLVKSLARKEELLKSK----HKEIEKMQDKVLRSYAEMENVMDRTRRE 234
           +D+   +   ++  +KS+  ++ LL  K      E+   +D+++R  A+ +N   RT RE
Sbjct: 122 ADNNEGKIAEIEASLKSIEDEKFLLADKVASLSNELSVERDRLIRISADFDNFRKRTERE 181

Query: 235 AENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLLEGVDMT 294
             N    A     ++LL V DN  RA S +K       E E+          +       
Sbjct: 182 RLNLVSNAQGEVVENLLAVLDNFERAKSQIKVE----TEGEEK---------VTNSYQSI 241

Query: 295 EKLLMEVLKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLR 354
            K  +E+L   GV   +   + FDP  H A+ +       +G V    + G++L +R+LR
Sbjct: 242 YKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEYEEGIVLEEYRKGFLLGERLLR 295

Query: 355 PAEVGVT 358
           P+ V V+
Sbjct: 302 PSMVKVS 295

[Close]

BLAST of Clc09G11770 vs. TAIR 10
Match: AT5G17710.2 (Co-chaperone GrpE family protein )

HSP 1 Score: 50.4 bits (119), Expect = 3.5e-06
Identity = 48/187 (25.67%), Postives = 83/187 (44.39%), Query Frame = 0


Query: 175 SDSESDEQPSMDDLVKSLARKEELLKSK----HKEIEKMQDKVLRSYAEMENVMDRTRRE 234
           +D+   +   ++  +KS+  ++ LL  K      E+   +D+++R  A+ +N   RT RE
Sbjct: 124 ADNNEGKIAEIEASLKSIEDEKFLLADKVASLSNELSVERDRLIRISADFDNFRKRTERE 183

Query: 235 AENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLLEGVDMT 294
             N    A     ++LL V DN  RA S +K       E E+          +       
Sbjct: 184 RLNLVSNAQGEVVENLLAVLDNFERAKSQIKVE----TEGEEK---------VTNSYQSI 243

Query: 295 EKLLMEVLKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLR 354
            K  +E+L   GV   +   + FDP  H A+ +       +G V    + G++L +R+LR
Sbjct: 244 YKQFVEILGSLGVIHVETVGKQFDPMLHEAIMREDSAEYEEGIVLEEYRKGFLLGERLLR 297

Query: 355 PAEVGVT 358
           P+ V V+
Sbjct: 304 PSMVKVS 297

[Close]

BLAST of Clc09G11770 vs. TAIR 10
Match: AT1G36390.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 44.3 bits (103), Expect = 2.5e-04
Identity = 48/195 (24.62%), Postives = 86/195 (44.10%), Query Frame = 0


Query: 174 DSDSESDEQPSMDDLVKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENV---MDRTRRE 233
           D  S ++ +     + K   + ++ + S   +I   ++  +R  A+ +N    +D+ R  
Sbjct: 90  DETSVTEIETMFCKIEKEKNKMDQKVLSLSMKIASEKEMKIRLQADFDNTRKKLDKDRLS 149

Query: 234 AENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLLEGVDMT 293
            E++ K  I    KSLL + D+  +A   V+    K  +          + T  +G+   
Sbjct: 150 TESNAKVQI---LKSLLPIIDSFEKAKLQVRVDTDKEKK----------IDTSYQGI--- 209

Query: 294 EKLLMEVLKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLR 353
            +  +EVL+   V       +PFDP  H A+ +    +   G +   L  G++L DRVLR
Sbjct: 210 YRQFVEVLRYLRVSVIATVGKPFDPLLHEAISREESEAVKAGIITEELNKGFVLGDRVLR 268

Query: 354 PAEVGVTQAVENNST 366
           PA+V V+    N  T
Sbjct: 270 PAKVKVSLGPVNKKT 268

The following BLAST results are available for this feature:

BLAST of Clc09G11770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898199.1	3.4e-149	81.69	grpE protein homolog 2, mitochondrial-like [Benincasa hispida]	[more]
XP_023536001.1	1.3e-140	78.53	grpE protein homolog 2, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pep...	[more]
KAG7024936.1	2.3e-137	76.82	grpE, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6592058.1	7.4e-136	76.28	Transcriptional adapter ADA2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022936267.1	1.4e-134	76.01	grpE protein homolog 2, mitochondrial-like [Cucurbita moschata]	[more]

BLAST of Clc09G11770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB47	7.6e-75	49.05	GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge2 PE...	[more]
Q9FLP3	1.4e-60	52.50	GrpE protein homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge1 PE...	[more]
A4YJR1	9.7e-30	45.16	Protein GrpE OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=grpE PE=3 SV=1	[more]
B6JCI1	9.7e-30	45.51	Protein GrpE OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC...	[more]
Q3SW78	4.8e-29	38.97	Protein GrpE OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 10...	[more]

BLAST of Clc09G11770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F7Z2	6.8e-135	76.01	GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111442938 PE=3 SV=1	[more]
A0A6J1CCY7	1.2e-126	73.30	GrpE protein homolog OS=Momordica charantia OX=3673 GN=LOC111010351 PE=3 SV=1	[more]
A0A2P5F264	9.0e-95	58.73	GrpE nucleotide exchange factor OS=Trema orientale OX=63057 GN=TorRG33x02_122180...	[more]
M5WTU3	1.2e-94	58.11	GrpE protein homolog OS=Prunus persica OX=3760 GN=PRUPE_4G223200 PE=3 SV=1	[more]
A0A5E4FCQ4	1.2e-94	58.11	GrpE protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B019776 PE=3 SV=1	[more]

BLAST of Clc09G11770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26780.1	5.4e-76	49.05	Co-chaperone GrpE family protein	[more]
AT5G55200.1	9.9e-62	52.50	Co-chaperone GrpE family protein	[more]
AT5G17710.1	3.5e-06	25.67	Co-chaperone GrpE family protein	[more]
AT5G17710.2	3.5e-06	25.67	Co-chaperone GrpE family protein	[more]
AT1G36390.1	2.5e-04	24.62	Co-chaperone GrpE family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 192..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..134
None	No IPR available	PANTHER	PTHR21237:SF37	GRPE PROTEIN HOMOLOG	coord: 61..363
IPR000740	GrpE nucleotide exchange factor	PRINTS	PR00773	GRPEPROTEIN	coord: 310..325 score: 45.9 coord: 337..356 score: 51.56 coord: 214..230 score: 42.83
IPR000740	GrpE nucleotide exchange factor	PFAM	PF01025	GrpE	coord: 191..357 e-value: 6.9E-49 score: 165.7
IPR000740	GrpE nucleotide exchange factor	PANTHER	PTHR21237	GRPE PROTEIN	coord: 61..363
IPR000740	GrpE nucleotide exchange factor	PROSITE	PS01071	GRPE	coord: 313..356
IPR000740	GrpE nucleotide exchange factor	HAMAP	MF_01151	GrpE	coord: 130..358 score: 18.219429
IPR000740	GrpE nucleotide exchange factor	CDD	cd00446	GrpE	coord: 207..356 e-value: 6.09598E-59 score: 185.402
IPR013805	GrpE nucleotide exchange factor, coiled-coil	GENE3D	3.90.20.20		coord: 186..300 e-value: 3.4E-27 score: 96.4
IPR013805	GrpE nucleotide exchange factor, coiled-coil	SUPERFAMILY	58014	Coiled-coil domain of nucleotide exchange factor GrpE	coord: 194..302
IPR009012	GrpE nucleotide exchange factor, head	GENE3D	2.30.22.10	Head domain of nucleotide exchange factor GrpE	coord: 302..357 e-value: 6.2E-21 score: 76.1
IPR009012	GrpE nucleotide exchange factor, head	SUPERFAMILY	51064	Head domain of nucleotide exchange factor GrpE	coord: 303..358

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G11770.2	Clc09G11770.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0030150	protein import into mitochondrial matrix
cellular_component	GO:0001405	PAM complex, Tim23 associated import motor
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0051082	unfolded protein binding