Clc09G07560 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G07560
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	UPF0690 protein C1orf52-like protein
Location	ClcChr09: 6076381 .. 6078864 (+)
RNA-Seq Expression	Clc09G07560
Synteny	Clc09G07560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTATTAGTGCTTCCATCTCTATTTTCCTAAATTAAAACTTTCACAATTCAAACATTGATATTAATTAGAATGCACACTGAGTTTATTTGTGAAGTTGGAGATTTGATCTTCAATTAATAAAAAAAAAAAGAAAGAAAAAAAGAAATTAACATTGATAAGCCCTAAGCCCCATGAACATCCGGAAAAGGGCTTCACTTTCCTGTTCCAGATTCTCACAATCCTTAAATTTCCAATCAAAGCTCGCTCGCCAGCTTCGGGCTTCAAATTTCCACTTGGTATTACTCTCTTCCTTCTATCTTTCTCCATGATTCTTGTAGTTTATACGAATTTCGAATTGCACGAAGCGTTTCCTTTCTTCGCGGTTTATGCTTTTCAGCTTTACAAATGAACTCTATTTTGCTAAGTTTTGACGTTGTTTCATGAAGCAACTCATTGTGTTATGTGTACTGGAGTTGACTTCAAACGCACCCCTTCAATTATTTTGCTGATTCTTGGTCTTCTCTATTGAGTATTGTGATTGTGGGGAGGGGGTTGTCTTTTTCATTATTTGGATTCTGGTTGATTGATTTGAATTGAACCATAATTTGCTTCAGATTCACATTGCTCTGCCATGAAAAGGGCAATCCCATGGAGTGATGAAGAGGACAATTCCTCATCTTTATCACAGTCGGATTCAGACATTGATGAAGATAATGGCGAGACAAAAGCAAGCTTTCGAGTTAAAGCTGGCCGGTCCTCTAAAGAAAAAGACACTGAAGGTTATAATTGCTTTACTTGGGAATATTTCTAGTACTCCTGAATATGAAATTGTAATCTAAAGCCTCATGGAACCCGTTTAATCGTTTGTCTCTCTGTTTTGCATTTTCAGTAAATAAAGTAATGCGTATTGTGTCAGAAAGTAATGAAAAAAGTAATCTATACACTGATACAAGGGGAGCTCTAGAAATTTTCCCCTACATCCTACATTTTATTTTAAGCACATAACTTAACTTTTCTTCTGAGTGTATTGCTTTCAATTGTTGGACTTAATATATATAAGTTAAAGGCAATAAGTTTGAGCCTTACAGTTATGGGTATTTTAAGTTTTCCTGAGTTCGTTGAAGTTGAATTGACAGGCCTAGGCTCACTTAGGCGAAGATGTGAATGCATAACATATTTTGGTTCATCAAACATAATCTTGGTTTATCAGTTTTTTGGCTTGCTGTTTCTATTTGTTTGGCCTGTTTTGTTTTGGTTTGGTTTATCTCTTAGTTTCTTATAGGGCTCTCTCTAAATTTTTTGTGCTTAGTTCTTAGTTTATGGTTTTCTTCTTTTTGGCTTGTTTTCTTCATTAGTTGTCTTGGTCTTCAATATTTGTCTTCTATTTGGAGTTCTTGTATTTTGGAGTAGTAGTCTCTCTTCATTATATTGGGACCTTTTGACTTTCCTGTAAGGCTGATAAATACTCTCTTTAAGTACTATGAACGTGAAGGGGCTAGAAGATTTGAATGTGAACGAACAGAAACTCATTGAATATGATTTGCAACATCTCTTTCAATTCTAAATATGATAAAAGAAATTCATTAGCTTCCTCATGGTTGTGTATGTGCTGTGTTTCATGTTACAGTCAAATCTGGAGGAAAGCGGAAGAATGTTGCTGTGGACTTTGATACATTGAAACGCCACGGCTACAAAGGTGGTCCATCAGTCTTGAAAGTACCACCTCCAAAAGAAAATGAGAAGCAAGATTGGTCATGGTCTACTGGCAGGGAGACTCGGGAAAACAGAGAAACTGAAGAATCGTATGAAGAGAGACAGAAAACAAGGGCTGCATTAGAAAATGGAGAACAACTGCTAACTGCGCAAACTCGGAAGGAGAAGGAGAAGAAGAATTTTTCCTTCTCCCAGAAGGAAAAGAGGAAAAGAGAGCTTGGTCAAGCGAGCAGGGGGAAAAACTATGTCGAAGAAGAAAAGAGAATGTTGAGGGAGAGTGGCATCTACTCTGGTTTTGATACTTGACCTTCCATTGTAAGTAAATTGTTAACAATGCATTGCATGTCAAAGCGCTATGTTACAAGATCACATTTGCAGTGGACTGTATTATTTACCCAAAAAAAGGCAGCTGACTGGAACCGAAATCCAATGCACTGCGAGATATCAACAAACATTATTTGTTTCGGGTTCAGTCCCCATATGTAAAGGCAGCTATCATCTTCACGGATTTAAGTTACATATGAAAATGGGGGTATAGATTTTGTACCATTTTTACTGGTTATTCAGTTGTATCAAGTATGATGTTCTTTTTATGATAATAGATCAAACAATTTCAGTAACCCAACAGTTGTATATGATTGTGAAAGGAGCTGTTTATCACCAAGAACTTGGGTTTGAAAACTCTTTTGGGGTCACTCAGGATGTTAATGGTTGAAGATGATTGCTTGATGATGATACAGGAGATTGGATGAAACCTTATCCTTAATTGCATTAAGGGGGTCAATGGTTA

mRNA sequence

GTTTATTAGTGCTTCCATCTCTATTTTCCTAAATTAAAACTTTCACAATTCAAACATTGATATTAATTAGAATGCACACTGAGTTTATTTGTGAAGTTGGAGATTTGATCTTCAATTAATAAAAAAAAAAAGAAAGAAAAAAAGAAATTAACATTGATAAGCCCTAAGCCCCATGAACATCCGGAAAAGGGCTTCACTTTCCTGTTCCAGATTCTCACAATCCTTAAATTTCCAATCAAAGCTCGCTCGCCAGCTTCGGGCTTCAAATTTCCACTTGATTCACATTGCTCTGCCATGAAAAGGGCAATCCCATGGAGTGATGAAGAGGACAATTCCTCATCTTTATCACAGTCGGATTCAGACATTGATGAAGATAATGGCGAGACAAAAGCAAGCTTTCGAGTTAAAGCTGGCCGGTCCTCTAAAGAAAAAGACACTGAAGTCAAATCTGGAGGAAAGCGGAAGAATGTTGCTGTGGACTTTGATACATTGAAACGCCACGGCTACAAAGGTGGTCCATCAGTCTTGAAAGTACCACCTCCAAAAGAAAATGAGAAGCAAGATTGGTCATGGTCTACTGGCAGGGAGACTCGGGAAAACAGAGAAACTGAAGAATCGTATGAAGAGAGACAGAAAACAAGGGCTGCATTAGAAAATGGAGAACAACTGCTAACTGCGCAAACTCGGAAGGAGAAGGAGAAGAAGAATTTTTCCTTCTCCCAGAAGGAAAAGAGGAAAAGAGAGCTTGGTCAAGCGAGCAGGGGGAAAAACTATGTCGAAGAAGAAAAGAGAATGTTGAGGGAGAGTGGCATCTACTCTGGTTTTGATACTTGACCTTCCATTGTAAGTAAATTGTTAACAATGCATTGCATGTCAAAGCGCTATGTTACAAGATCACATTTGCAGTGGACTGTATTATTTACCCAAAAAAAGGCAGCTGACTGGAACCGAAATCCAATGCACTGCGAGATATCAACAAACATTATTTGTTTCGGGTTCAGTCCCCATATGTAAAGGCAGCTATCATCTTCACGGATTTAAGTTACATATGAAAATGGGGGTATAGATTTTGTACCATTTTTACTGGTTATTCAGTTGTATCAAGTATGATGTTCTTTTTATGATAATAGATCAAACAATTTCAGTAACCCAACAGTTGTATATGATTGTGAAAGGAGCTGTTTATCACCAAGAACTTGGGTTTGAAAACTCTTTTGGGGTCACTCAGGATGTTAATGGTTGAAGATGATTGCTTGATGATGATACAGGAGATTGGATGAAACCTTATCCTTAATTGCATTAAGGGGGTCAATGGTTA

Coding sequence (CDS)

ATGAAAAGGGCAATCCCATGGAGTGATGAAGAGGACAATTCCTCATCTTTATCACAGTCGGATTCAGACATTGATGAAGATAATGGCGAGACAAAAGCAAGCTTTCGAGTTAAAGCTGGCCGGTCCTCTAAAGAAAAAGACACTGAAGTCAAATCTGGAGGAAAGCGGAAGAATGTTGCTGTGGACTTTGATACATTGAAACGCCACGGCTACAAAGGTGGTCCATCAGTCTTGAAAGTACCACCTCCAAAAGAAAATGAGAAGCAAGATTGGTCATGGTCTACTGGCAGGGAGACTCGGGAAAACAGAGAAACTGAAGAATCGTATGAAGAGAGACAGAAAACAAGGGCTGCATTAGAAAATGGAGAACAACTGCTAACTGCGCAAACTCGGAAGGAGAAGGAGAAGAAGAATTTTTCCTTCTCCCAGAAGGAAAAGAGGAAAAGAGAGCTTGGTCAAGCGAGCAGGGGGAAAAACTATGTCGAAGAAGAAAAGAGAATGTTGAGGGAGAGTGGCATCTACTCTGGTTTTGATACTTGA

Protein sequence

MKRAIPWSDEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTRAALENGEQLLTAQTRKEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSGFDT

Homology

[Close]

BLAST of Clc09G07560 vs. NCBI nr
Match: XP_038896833.1 (UPF0690 protein C1orf52 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 317.8 bits (813), Expect = 6.1e-83
Identity = 175/185 (94.59%), Postives = 176/185 (95.14%), Query Frame = 0


Query: 1   MKRAIPWSDEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVA 60
           MKRAIPWSDEEDNSSSLSQSDSD DEDNGETKASFRVKAGRSSKEKD EVKSGGKRK+VA
Sbjct: 1   MKRAIPWSDEEDNSSSLSQSDSDADEDNGETKASFRVKAGRSSKEKDVEVKSGGKRKSVA 60

Query: 61  VDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTRAALE 120
           VDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTRAALE
Sbjct: 61  VDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTRAALE 120

Query: 121 NGEQLLTAQTR------KEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIY 180
           NGEQLLTAQTR      KEKEKKN SFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIY
Sbjct: 121 NGEQLLTAQTRKEKEKEKEKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIY 180

[Close]

BLAST of Clc09G07560 vs. NCBI nr
Match: XP_008451298.1 (PREDICTED: putative uncharacterized protein DDB_G0271982 [Cucumis melo] >KAA0064008.1 UPF0690 protein C1orf52-like protein [Cucumis melo var. makuwa] >TYK26172.1 UPF0690 protein C1orf52-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 312.4 bits (799), Expect = 2.6e-81
Identity = 172/187 (91.98%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MKRAIPWSDEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVA 60
           MKRA+PWSDEEDNSSSLSQSDSD DEDNGETKASFRVK GRSSKEKDTEVKSGGKRK+VA
Sbjct: 1   MKRAMPWSDEEDNSSSLSQSDSDGDEDNGETKASFRVKGGRSSKEKDTEVKSGGKRKSVA 60

Query: 61  VDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTRAALE 120
           VDFDTL+RHGY+GGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTRAALE
Sbjct: 61  VDFDTLQRHGYRGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTRAALE 120

Query: 121 NGEQLLTAQTRKEK--------EKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESG 180
           NGEQLLTAQTRKEK        EKKN SFSQKEKRKRELGQASRGKNYVEEEKRMLRESG
Sbjct: 121 NGEQLLTAQTRKEKEREKEKEREKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESG 180

[Close]

BLAST of Clc09G07560 vs. NCBI nr
Match: XP_004146968.1 (histone-lysine N-methyltransferase, H3 lysine-79 specific [Cucumis sativus] >KGN44780.1 hypothetical protein Csa_016760 [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 7.7e-78
Identity = 169/192 (88.02%), Postives = 174/192 (90.62%), Query Frame = 0


Query: 1   MKRAIPWS-DEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNV 60
           MKRA+PWS DEEDNSSSLSQSDSD DEDNGETKASFRVKAGRSSKEKDTEVK GGKRK+V
Sbjct: 1   MKRAMPWSDDEEDNSSSLSQSDSDGDEDNGETKASFRVKAGRSSKEKDTEVKPGGKRKSV 60

Query: 61  AVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTRAAL 120
           AVDFDTL+RHGY+GGPSVLKVPPPKENEKQDWSWS GRETRENRE EESYEERQ+TRAAL
Sbjct: 61  AVDFDTLQRHGYRGGPSVLKVPPPKENEKQDWSWSNGRETRENRENEESYEERQRTRAAL 120

Query: 121 ENGEQLLTAQTR------------KEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRM 180
           ENGEQLLTAQTR            KEKEKKN SFSQKEKRKRELGQASRGKNYVEEEKRM
Sbjct: 121 ENGEQLLTAQTRKEKEKEKEKEREKEKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRM 180

[Close]

BLAST of Clc09G07560 vs. NCBI nr
Match: XP_022953507.1 (UPF0690 protein C1orf52 homolog [Cucurbita moschata] >KAG7014460.1 hypothetical protein SDJN02_24637 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 289.3 bits (739), Expect = 2.3e-74
Identity = 163/183 (89.07%), Postives = 169/183 (92.35%), Query Frame = 0


Query: 1   MKRAIPWSDEEDNS----SSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKR 60
           MKRA+PWSDEEDNS    SSLSQSDSD DED+G+ KA FRVKAGRSSKEK TEVKS GKR
Sbjct: 1   MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVKS-GKR 60

Query: 61  KNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTR 120
           KN+AVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENR+TEESYEERQKTR
Sbjct: 61  KNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRDTEESYEERQKTR 120

Query: 121 AALENGEQLLTAQTRKEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSG 180
           AALENGEQLLTA T  +KEKKN SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSG
Sbjct: 121 AALENGEQLLTALT--QKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSG 180

[Close]

BLAST of Clc09G07560 vs. NCBI nr
Match: XP_022991319.1 (UPF0690 protein C1orf52 homolog [Cucurbita maxima] >XP_023547485.1 UPF0690 protein C1orf52 homolog [Cucurbita pepo subsp. pepo] >XP_023547486.1 UPF0690 protein C1orf52 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.5 bits (737), Expect = 4.0e-74
Identity = 163/183 (89.07%), Postives = 169/183 (92.35%), Query Frame = 0


Query: 1   MKRAIPWSDEEDNS----SSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKR 60
           MKRA+PWSDEEDNS    SSLSQSDSD DED+G+ KA FRVKAGRSSKEK TEVKS GKR
Sbjct: 1   MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVKS-GKR 60

Query: 61  KNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTR 120
           K++AVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTR
Sbjct: 61  KSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTR 120

Query: 121 AALENGEQLLTAQTRKEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSG 180
           AALENGEQLLTA T  +KEKKN SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSG
Sbjct: 121 AALENGEQLLTALT--QKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSG 180

[Close]

BLAST of Clc09G07560 vs. ExPASy TrEMBL
Match: A0A5D3DRL7 (UPF0690 protein C1orf52-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00990 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81
Identity = 172/187 (91.98%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MKRAIPWSDEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVA 60
           MKRA+PWSDEEDNSSSLSQSDSD DEDNGETKASFRVK GRSSKEKDTEVKSGGKRK+VA
Sbjct: 1   MKRAMPWSDEEDNSSSLSQSDSDGDEDNGETKASFRVKGGRSSKEKDTEVKSGGKRKSVA 60

Query: 61  VDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTRAALE 120
           VDFDTL+RHGY+GGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTRAALE
Sbjct: 61  VDFDTLQRHGYRGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTRAALE 120

Query: 121 NGEQLLTAQTRKEK--------EKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESG 180
           NGEQLLTAQTRKEK        EKKN SFSQKEKRKRELGQASRGKNYVEEEKRMLRESG
Sbjct: 121 NGEQLLTAQTRKEKEREKEKEREKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESG 180

[Close]

BLAST of Clc09G07560 vs. ExPASy TrEMBL
Match: A0A1S3BRX7 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103492638 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81
Identity = 172/187 (91.98%), Postives = 176/187 (94.12%), Query Frame = 0


Query: 1   MKRAIPWSDEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNVA 60
           MKRA+PWSDEEDNSSSLSQSDSD DEDNGETKASFRVK GRSSKEKDTEVKSGGKRK+VA
Sbjct: 1   MKRAMPWSDEEDNSSSLSQSDSDGDEDNGETKASFRVKGGRSSKEKDTEVKSGGKRKSVA 60

Query: 61  VDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTRAALE 120
           VDFDTL+RHGY+GGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTRAALE
Sbjct: 61  VDFDTLQRHGYRGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTRAALE 120

Query: 121 NGEQLLTAQTRKEK--------EKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESG 180
           NGEQLLTAQTRKEK        EKKN SFSQKEKRKRELGQASRGKNYVEEEKRMLRESG
Sbjct: 121 NGEQLLTAQTRKEKEREKEKEREKKNVSFSQKEKRKRELGQASRGKNYVEEEKRMLRESG 180

[Close]

BLAST of Clc09G07560 vs. ExPASy TrEMBL
Match: A0A0A0K4X3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387150 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.7e-78
Identity = 169/192 (88.02%), Postives = 174/192 (90.62%), Query Frame = 0


Query: 1   MKRAIPWS-DEEDNSSSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKRKNV 60
           MKRA+PWS DEEDNSSSLSQSDSD DEDNGETKASFRVKAGRSSKEKDTEVK GGKRK+V
Sbjct: 1   MKRAMPWSDDEEDNSSSLSQSDSDGDEDNGETKASFRVKAGRSSKEKDTEVKPGGKRKSV 60

Query: 61  AVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTRAAL 120
           AVDFDTL+RHGY+GGPSVLKVPPPKENEKQDWSWS GRETRENRE EESYEERQ+TRAAL
Sbjct: 61  AVDFDTLQRHGYRGGPSVLKVPPPKENEKQDWSWSNGRETRENRENEESYEERQRTRAAL 120

Query: 121 ENGEQLLTAQTR------------KEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRM 180
           ENGEQLLTAQTR            KEKEKKN SFSQKEKRKRELGQASRGKNYVEEEKRM
Sbjct: 121 ENGEQLLTAQTRKEKEKEKEKEREKEKEKKNVSFSQKEKRKRELGQASRGKNYVEEEKRM 180

[Close]

BLAST of Clc09G07560 vs. ExPASy TrEMBL
Match: A0A6J1GNF0 (UPF0690 protein C1orf52 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456036 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.1e-74
Identity = 163/183 (89.07%), Postives = 169/183 (92.35%), Query Frame = 0


Query: 1   MKRAIPWSDEEDNS----SSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKR 60
           MKRA+PWSDEEDNS    SSLSQSDSD DED+G+ KA FRVKAGRSSKEK TEVKS GKR
Sbjct: 1   MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVKS-GKR 60

Query: 61  KNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTR 120
           KN+AVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENR+TEESYEERQKTR
Sbjct: 61  KNIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRDTEESYEERQKTR 120

Query: 121 AALENGEQLLTAQTRKEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSG 180
           AALENGEQLLTA T  +KEKKN SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSG
Sbjct: 121 AALENGEQLLTALT--QKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSG 180

[Close]

BLAST of Clc09G07560 vs. ExPASy TrEMBL
Match: A0A6J1JUH2 (UPF0690 protein C1orf52 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488002 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.9e-74
Identity = 163/183 (89.07%), Postives = 169/183 (92.35%), Query Frame = 0


Query: 1   MKRAIPWSDEEDNS----SSLSQSDSDIDEDNGETKASFRVKAGRSSKEKDTEVKSGGKR 60
           MKRA+PWSDEEDNS    SSLSQSDSD DED+G+ KA FRVKAGRSSKEK TEVKS GKR
Sbjct: 1   MKRAMPWSDEEDNSSSKESSLSQSDSDADEDSGDAKAIFRVKAGRSSKEKGTEVKS-GKR 60

Query: 61  KNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTR 120
           K++AVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTR
Sbjct: 61  KSIAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEERQKTR 120

Query: 121 AALENGEQLLTAQTRKEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRESGIYSG 180
           AALENGEQLLTA T  +KEKKN SFSQKEKRKRELGQASRGKNYVEEEKR LRESGIYSG
Sbjct: 121 AALENGEQLLTALT--QKEKKNISFSQKEKRKRELGQASRGKNYVEEEKRTLRESGIYSG 180

[Close]

BLAST of Clc09G07560 vs. TAIR 10
Match: AT4G04614.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 124.4 bits (311), Expect = 9.2e-29
Identity = 89/188 (47.34%), Postives = 121/188 (64.36%), Query Frame = 0


Query: 2   KRAIPWSDEEDN--------SSSLSQSDSDIDE-DNGETKASFRVKAGRSSKEKDTEVKS 61
           K  + W D++D+        SSS S SDS++D  + GE K        R SK+    +  
Sbjct: 3   KGLMRWDDDDDDDDEDSSEESSSSSASDSNVDNTEIGEKKKK------RKSKK---PIAR 62

Query: 62  GGKRKNVAVDFDTLKRHGYKGGPSVLKVPPPKENEKQDWSWSTGRETRENRETEESYEER 121
             K+   A D+++L++HGYK    +  +P P   EKQDWSW+TG++ +   E +ESY+ER
Sbjct: 63  FAKKDKKAFDYESLQQHGYK-AVGLSDIPAPM--EKQDWSWTTGKDKQRVEEVKESYQER 122

Query: 122 QKTR-AALENGEQLLTAQTRKEKEKKNFSFSQKEKRKRELGQASRGKNYVEEEKRMLRES 180
           + TR AA+  GE +  AQ R   ++KN SFSQKEK+KR+LGQASRGKNYVEEEKR LRES
Sbjct: 123 EATRAAAVTGGETIANAQLR--NDRKNLSFSQKEKKKRDLGQASRGKNYVEEEKRQLRES 176

The following BLAST results are available for this feature:

BLAST of Clc09G07560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896833.1	6.1e-83	94.59	UPF0690 protein C1orf52 homolog isoform X1 [Benincasa hispida]	[more]
XP_008451298.1	2.6e-81	91.98	PREDICTED: putative uncharacterized protein DDB_G0271982 [Cucumis melo] >KAA0064...	[more]
XP_004146968.1	7.7e-78	88.02	histone-lysine N-methyltransferase, H3 lysine-79 specific [Cucumis sativus] >KGN...	[more]
XP_022953507.1	2.3e-74	89.07	UPF0690 protein C1orf52 homolog [Cucurbita moschata] >KAG7014460.1 hypothetical ...	[more]
XP_022991319.1	4.0e-74	89.07	UPF0690 protein C1orf52 homolog [Cucurbita maxima] >XP_023547485.1 UPF0690 prote...	[more]

BLAST of Clc09G07560 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Clc09G07560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DRL7	1.2e-81	91.98	UPF0690 protein C1orf52-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BRX7	1.2e-81	91.98	Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103492638 PE=4 SV=1	[more]
A0A0A0K4X3	3.7e-78	88.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387150 PE=4 SV=1	[more]
A0A6J1GNF0	1.1e-74	89.07	UPF0690 protein C1orf52 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456036 PE...	[more]
A0A6J1JUH2	1.9e-74	89.07	UPF0690 protein C1orf52 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488002 PE=4...	[more]

BLAST of Clc09G07560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G04614.1	9.2e-29	47.34	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..179
None	No IPR available	PANTHER	PTHR31833	UPF0690 PROTEIN C1ORF52	coord: 3..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G07560.1	Clc09G07560.1	mRNA