Clc09G06390 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc09G06390
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Pentatricopeptide repeat-containing protein
Location	ClcChr09: 4939335 .. 4940600 (+)
RNA-Seq Expression	Clc09G06390
Synteny	Clc09G06390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

atgacaccattcggcgctcaattcagggctgaatcaaacagaattatctctgttttcaccacttctctttcccaaattcacatccctcaaattcaagctcaactcatccttcaaaacctccattcaaatcccaccatagcccaccagttcattaacacttgccatcgtcttcaacttctcgattcggctcttctcttctttacccatatccccaacccccatgtcttcgtttgcaattccttaatcagagccttctctcactccgaaatcccccatacccctctttccatttacacccacatgaacagaaactccattttccccaataattacaccttccctttccttctcaagtccttagctgatttcaacgattttgttggtggacaatctgttcatacccatgttctgaaattggggtatgtttctgatgtttatgtgatgaattctttgatggatgtgtatgcgtcgtgtgggaaaatggggttatgcaagaaggtgttcgacgaaatgcctcaaagagatgttgtgtcgtggactgttttgattatgggttatcgagttgctttgatgtttgatgatgctttgattgcatttgaacagatgcaatatgcaggtgtggagcctaatcgtgtgacgatggtgaatgcattggctgcttgtgcaaactttggagccattgaaatgggtgtttggatacatgagtttgtgaagaggaaaggatgggaagtggatgtgattttagggacttctttgattgatatgtatgggaaatgtgggagaatcaaagagggattggttgttttccaagccatgaaagagaagaatgtgtatacatggaatgcacttattaaagggctggctttggccaagagtggagaggaagccattgcttggtttaagagaatggatgaaggaggagttgaagcagatgaagtgacattagtggcagtgctttgtgcttgtagccattctggcttggtggatatgggcaggcagatcttccgatcgttgatgaacggaaggttcgggttttctccaggaatcaaacactattcatgtatggtagatctcttggctcgttatgggtgcattgaagaggcttttgtattgataaaggatatgCCTTTTGAGGCCACCAAAGCAATGTGGGGGTCTTTACTATCTGGTAGCAGAGCTCATGGAAGCTTGGAAGTCAGTGAAACTGCAGCAAGGAAGCTTGTTGAAATGGAACAGAAAATAGTGCTTATTATGTTGTGTATCTAA

mRNA sequence

atgacaccattcggcgctcaattcagggctgaatcaaacagaattatctctgttttcaccacttctctttcccaaattcacatccctcaaattcaagctcaactcatccttcaaaacctccattcaaatcccaccatagcccaccagttcattaacacttgccatcgtcttcaacttctcgattcggctcttctcttctttacccatatccccaacccccatgtcttcgtttgcaattccttaatcagagccttctctcactccgaaatcccccatacccctctttccatttacacccacatgaacagaaactccattttccccaataattacaccttccctttccttctcaagtccttagctgatttcaacgattttgttggtggacaatctgttcatacccatgttctgaaattggggtatgtttctgatgtttatgtgatgaattctttgatggatgtgtatgcgtcgtgtgggaaaatggggttatgcaagaaggtgttcgacgaaatgcctcaaagagatgttgtgtcgtggactgttttgattatgggttatcgagttgctttgatgtttgatgatgctttgattgcatttgaacagatgcaatatgcaggtgtggagcctaatcgtgtgacgatggtgaatgcattggctgcttgtgcaaactttggagccattgaaatgggtgtttggatacatgagtttgtgaagaggaaaggatgggaagtggatgtgattttagggacttctttgattgatatgtatgggaaatgtgggagaatcaaagagggattggttgttttccaagccatgaaagagaagaatgtgtatacatggaatgcacttattaaagggctggctttggccaagagtggagaggaagccattgcttggtttaagagaatggatgaaggaggagttgaagcagatgaagtgacattagtggcagtgctttgtgcttgtagccattctggcttggtggatatgggcaggcagatcttccgatcgttgatgaacggaaggttcgggttttctccaggaatcaaacactattcatgtatggtagatctcttggctcgttatgggtgcattgaagaggcttttgtattgataaaggatatgCCTTTTGAGGCCACCAAAGCAATGTGGGGGTCTTTACTATCTGGTAGCAGAGCTCATGGAAGCTTGGAAGTCAGTGAAACTGCAGCAAGGAAGCTTGTTGAAATGGAACAGAAAATAGTGCTTATTATGTTGTGTATCTAA

Coding sequence (CDS)

atgacaccattcggcgctcaattcagggctgaatcaaacagaattatctctgttttcaccacttctctttcccaaattcacatccctcaaattcaagctcaactcatccttcaaaacctccattcaaatcccaccatagcccaccagttcattaacacttgccatcgtcttcaacttctcgattcggctcttctcttctttacccatatccccaacccccatgtcttcgtttgcaattccttaatcagagccttctctcactccgaaatcccccatacccctctttccatttacacccacatgaacagaaactccattttccccaataattacaccttccctttccttctcaagtccttagctgatttcaacgattttgttggtggacaatctgttcatacccatgttctgaaattggggtatgtttctgatgtttatgtgatgaattctttgatggatgtgtatgcgtcgtgtgggaaaatggggttatgcaagaaggtgttcgacgaaatgcctcaaagagatgttgtgtcgtggactgttttgattatgggttatcgagttgctttgatgtttgatgatgctttgattgcatttgaacagatgcaatatgcaggtgtggagcctaatcgtgtgacgatggtgaatgcattggctgcttgtgcaaactttggagccattgaaatgggtgtttggatacatgagtttgtgaagaggaaaggatgggaagtggatgtgattttagggacttctttgattgatatgtatgggaaatgtgggagaatcaaagagggattggttgttttccaagccatgaaagagaagaatgtgtatacatggaatgcacttattaaagggctggctttggccaagagtggagaggaagccattgcttggtttaagagaatggatgaaggaggagttgaagcagatgaagtgacattagtggcagtgctttgtgcttgtagccattctggcttggtggatatgggcaggcagatcttccgatcgttgatgaacggaaggttcgggttttctccaggaatcaaacactattcatgtatggtagatctcttggctcgttatgggtgcattgaagaggcttttgtattgataaaggatatgCCTTTTGAGGCCACCAAAGCAATGTGGGGGTCTTTACTATCTGGTAGCAGAGCTCATGGAAGCTTGGAAGTCAGTGAAACTGCAGCAAGGAAGCTTGTTGAAATGGAACAGAAAATAGTGCTTATTATGTTGTGTATCTAA

Protein sequence

MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLLDSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSLADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWTVLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRKGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWFKRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEMEQKIVLIMLCI

Homology

[Close]

BLAST of Clc09G06390 vs. NCBI nr
Match: XP_038898992.1 (pentatricopeptide repeat-containing protein At5g56310-like [Benincasa hispida])

HSP 1 Score: 782.3 bits (2019), Expect = 2.1e-222
Identity = 384/411 (93.43%), Postives = 394/411 (95.86%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           MTPF AQFRAESNRI+SVFTTSLS IHIPQIQAQLILQNLHSNPTIAH FINTCH LQLL
Sbjct: 1   MTPFTAQFRAESNRILSVFTTSLSPIHIPQIQAQLILQNLHSNPTIAHHFINTCHHLQLL 60

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSALLFF HIP PHVFVCNSLIRAFSHS+IPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL
Sbjct: 61  DSALLFFNHIPKPHVFVCNSLIRAFSHSKIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           ADFND V GQSVHTHVLKLGYV+DVYV NSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT
Sbjct: 121 ADFNDLVSGQSVHTHVLKLGYVADVYVQNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           VLIMGYRV+LMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK
Sbjct: 181 VLIMGYRVSLMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
           GWE+DVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300

Query: 301 KRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLA 360
            RMDE GVE DEVTLVAVLCACSHSGLVDMG+QIF+SL + RFGFSPGIKHYSCMVDLLA
Sbjct: 301 NRMDEEGVEPDEVTLVAVLCACSHSGLVDMGKQIFQSLTDRRFGFSPGIKHYSCMVDLLA 360

Query: 361 RYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEME 412
           RYGCIE AFVLIKDMPFEATKAMWGSLL+GSRAHG LEVSE AA+KLVEME
Sbjct: 361 RYGCIEAAFVLIKDMPFEATKAMWGSLLAGSRAHGGLEVSEIAAKKLVEME 411

[Close]

BLAST of Clc09G06390 vs. NCBI nr
Match: XP_023548659.1 (pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita pepo subsp. pepo] >XP_023548660.1 pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 736.1 bits (1899), Expect = 1.7e-208
Identity = 361/412 (87.62%), Postives = 386/412 (93.69%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M  FG Q  AESNRI+S+F TSLS IHIPQIQAQLI+QNLHSNPTIAH FINTCH L+LL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSALLFFT IP PHVFVCNSLIRAFSHS+IPHTPLSIY HMNRNSI PNNYTFPFLLKSL
Sbjct: 61  DSALLFFTQIPKPHVFVCNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKSL 120

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           ADFN  V GQSVH HV+KLGYVSDVYV NSLMDVYASCG+MGLCKKVFDEMP RDVVSWT
Sbjct: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACA+FGAIEMG+WIHEFVKR+
Sbjct: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGIWIHEFVKRR 240

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
           GWE+DVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNVYTWNALI GLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300

Query: 301 KRMDE-GGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLL 360
           KRMDE GGV+ADEVTLVAVLCACSHSGLVD+GRQIF S+++G+FGFSPGI+HYSCMVDLL
Sbjct: 301 KRMDEDGGVKADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360

Query: 361 ARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEME 412
           AR GCIEE+F LIK+MPF+ATKAMWGSLL+GSRA GSLE+SE AARKLVEME
Sbjct: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEME 412

[Close]

BLAST of Clc09G06390 vs. NCBI nr
Match: XP_008451605.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like [Cucumis melo])

HSP 1 Score: 731.9 bits (1888), Expect = 3.2e-207
Identity = 354/411 (86.13%), Postives = 380/411 (92.46%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M PFG QFRAES RI+S+FTTSLS +HIPQIQAQLIL+NLHS+P IAH FINTCH L LL
Sbjct: 1   MRPFGTQFRAESTRILSIFTTSLSPVHIPQIQAQLILRNLHSHPLIAHHFINTCHHLHLL 60

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSA LFFTHIP PHVF+CNSLIRAF+HS IPHTPLSIYTHMNRNSI PNNYTFPF+LKSL
Sbjct: 61  DSAFLFFTHIPKPHVFICNSLIRAFAHSNIPHTPLSIYTHMNRNSISPNNYTFPFVLKSL 120

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           ADF D V GQSVHTHV+KLG+ SD+YV N+LMDVYASCGKMGLCKKVFDEM QRDVVSWT
Sbjct: 121 ADFKDLVSGQSVHTHVVKLGHDSDLYVQNTLMDVYASCGKMGLCKKVFDEMLQRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           +LIMGYRV+LM DDALI FEQMQYAGVEPNRVT+VNALAACA+FGAIEMGVWIHEFVK K
Sbjct: 181 ILIMGYRVSLMLDDALIVFEQMQYAGVEPNRVTIVNALAACASFGAIEMGVWIHEFVKTK 240

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
            WEVDV+LGT+LIDMYGKCGRIKE L VFQAMKEKNVYTWN LI GLALAKSGEEAIAWF
Sbjct: 241 RWEVDVVLGTALIDMYGKCGRIKEALAVFQAMKEKNVYTWNVLINGLALAKSGEEAIAWF 300

Query: 301 KRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLA 360
           KRMDE GVEAD+VTLVAVLCACSHSGLV+ GRQIFRSL++GRFGFSP IKHYSCMVD+LA
Sbjct: 301 KRMDEEGVEADDVTLVAVLCACSHSGLVNSGRQIFRSLIHGRFGFSPEIKHYSCMVDILA 360

Query: 361 RYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEME 412
           R GCIEEAFV+IKDMPFEATKAMWGSLL+GSRAHG+LEVSE AARKLVEME
Sbjct: 361 RNGCIEEAFVMIKDMPFEATKAMWGSLLTGSRAHGNLEVSEIAARKLVEME 411

[Close]

BLAST of Clc09G06390 vs. NCBI nr
Match: XP_022991568.1 (pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita maxima])

HSP 1 Score: 731.1 bits (1886), Expect = 5.4e-207
Identity = 359/412 (87.14%), Postives = 382/412 (92.72%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M  FG Q  AESNRI+S+F TSLS IHIPQIQAQLI+QNLHSNPTIAH FINTCH L+LL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHHLRLL 60

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSAL FFT IP PHVFVCNSLIRAFSHS+IPHTPLSIY HMNR SI PNNYTFPFLLKSL
Sbjct: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPHTPLSIYAHMNRTSILPNNYTFPFLLKSL 120

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           ADFN  V GQSVH HV+KLGYVSDVYV NSLMDVYASCG+MGLCKKVFDEMP RDVVSWT
Sbjct: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACA+FGAIEMGVWIH FVKR+
Sbjct: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHAFVKRR 240

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
           GWE+DVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNVYTWNALI GLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300

Query: 301 KRMDE-GGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLL 360
           KRMDE GGVEADEVTLV VLCACSHSGLVD+GRQIF S+++G+FGFSPGI+HYSCMVDLL
Sbjct: 301 KRMDEGGGVEADEVTLVTVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360

Query: 361 ARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEME 412
           AR GCIEE+F LIK+MPF+ATKAMWGSLL+GSRA GSLE+SE AARKLVEME
Sbjct: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEISEFAARKLVEME 412

[Close]

BLAST of Clc09G06390 vs. NCBI nr
Match: KAG6575842.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014378.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 730.7 bits (1885), Expect = 7.1e-207
Identity = 359/412 (87.14%), Postives = 384/412 (93.20%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M  FG Q  AESNRI+S+F TSLS IHIPQIQAQLI+QNLHSNPTIAH FINTCH L+LL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSAL FFT IP PHVFVCNSLIRAFSHS+IP TPLSIY HMNRNSI PNNYTFPFLLKSL
Sbjct: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL 120

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           ADFN  V GQSVH HV+KLGYVSDVYV NSLMDVYASCG+MGLCKKVFDEMP RDVVSWT
Sbjct: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACA+FGAIEMGVWIHEFVKR+
Sbjct: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHEFVKRR 240

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
           GWE+DVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNVYTWNALI GLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300

Query: 301 KRM-DEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLL 360
           KRM +EGG+EADEVTLVAVLCACSHSGLVD+GRQIF S+++G+FGFSPGI+HYSCMVDLL
Sbjct: 301 KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360

Query: 361 ARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEME 412
           AR GCIEE+F LIK+MPF+ATKAMWGSLL+GSRA GSLE+SE AARKLVEME
Sbjct: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEME 412

[Close]

BLAST of Clc09G06390 vs. ExPASy Swiss-Prot
Match: Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 8.2e-73
Identity = 158/435 (36.32%), Postives = 239/435 (54.94%), Query Frame = 0


Query: 19  FTTSLSQIH------IPQIQAQLILQNLHSNPTIAHQFINTCHRLQLLDSALLFFTHIPN 78
           F TSL +IH      + Q    +I+  L+ +     +FI  C     L  A   FTH P 
Sbjct: 17  FVTSL-KIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPC 76

Query: 79  PHVFVCNSLIRAFSHSEIPHT---PLSIYTHMNRNSIFPNNYTFPFLLKSLADFNDFVGG 138
           P+ ++ N++IRA S  + P+     +++Y  +      P+ +TFPF+LK     +D   G
Sbjct: 77  PNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFG 136

Query: 139 QSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDV------------- 198
           + +H  V+  G+ S V+V+  L+ +Y SCG +G  +K+FDEM  +DV             
Sbjct: 137 RQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKV 196

Query: 199 --------------------VSWTVLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVN 258
                               VSWT +I GY  +    +A+  F++M    VEP+ VT++ 
Sbjct: 197 GEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLA 256

Query: 259 ALAACANFGAIEMGVWIHEFVKRKGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKN 318
            L+ACA+ G++E+G  I  +V  +G    V L  ++IDMY K G I + L VF+ + E+N
Sbjct: 257 VLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERN 316

Query: 319 VYTWNALIKGLALAKSGEEAIAWFKRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFR 378
           V TW  +I GLA    G EA+A F RM + GV  ++VT +A+L ACSH G VD+G+++F 
Sbjct: 317 VVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFN 376

Query: 379 SLMNGRFGFSPGIKHYSCMVDLLARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGS 412
           S M  ++G  P I+HY CM+DLL R G + EA  +IK MPF+A  A+WGSLL+ S  H  
Sbjct: 377 S-MRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHD 436

[Close]

BLAST of Clc09G06390 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 3.4e-71
Identity = 156/447 (34.90%), Postives = 234/447 (52.35%), Query Frame = 0


Query: 1   MTPFGAQFRAESN--RIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTC---H 60
           M      F  E N    +S       Q  + QI A+++   L  +     +F++ C    
Sbjct: 1   MNVISCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISST 60

Query: 61  RLQLLDSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPF 120
               L  A + F     P  F+ N +IR FS S+ P   L +Y  M  +S   N YTFP 
Sbjct: 61  SSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPS 120

Query: 121 LLKSLADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYA------------------- 180
           LLK+ ++ + F     +H  + KLGY +DVY +NSL++ YA                   
Sbjct: 121 LLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPD 180

Query: 181 ------------SCGKMGLCKKVFDEMPQRDVVSWTVLIMGYRVALMFDDALIAFEQMQY 240
                         GKM +   +F +M +++ +SWT +I GY  A M  +AL  F +MQ 
Sbjct: 181 DVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQN 240

Query: 241 AGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRKGWEVDVILGTSLIDMYGKCGRIKE 300
           + VEP+ V++ NAL+ACA  GA+E G WIH ++ +    +D +LG  LIDMY KCG ++E
Sbjct: 241 SDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 300

Query: 301 GLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWFKRMDEGGVEADEVTLVAVLCACSH 360
            L VF+ +K+K+V  W ALI G A    G EAI+ F  M + G++ + +T  AVL ACS+
Sbjct: 301 ALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSY 360

Query: 361 SGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLARYGCIEEAFVLIKDMPFEATKAMW 412
           +GLV+ G+ IF S M   +   P I+HY C+VDLL R G ++EA   I++MP +    +W
Sbjct: 361 TGLVEEGKLIFYS-MERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIW 420

[Close]

BLAST of Clc09G06390 vs. ExPASy Swiss-Prot
Match: Q9SN85 (Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H76 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.2e-70
Identity = 147/409 (35.94%), Postives = 227/409 (55.50%), Query Frame = 0


Query: 13  NRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQL------LDSALLF 72
           + ++S+  +S  ++H+ QI A L+  +L  N  + H F++   RL L      ++ +   
Sbjct: 12  DHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLS---RLALSLIPRDINYSCRV 71

Query: 73  FTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFP-NNYTFPFLLKSLADFND 132
           F+   NP +  CN++IRAFS S+ P     ++  + RNS  P N  +  F LK      D
Sbjct: 72  FSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGD 131

Query: 133 FVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWTVLIMG 192
            +GG  +H  +   G++SD  +M +LMD+Y++C       KVFDE+P+RD VSW VL   
Sbjct: 132 LLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSC 191

Query: 193 YRVALMFDDALIAFEQMQY---AGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRKGW 252
           Y       D L+ F++M+      V+P+ VT + AL ACAN GA++ G  +H+F+   G 
Sbjct: 192 YLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGL 251

Query: 253 EVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWFKR 312
              + L  +L+ MY +CG + +   VF  M+E+NV +W ALI GLA+   G+EAI  F  
Sbjct: 252 SGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNE 311

Query: 313 MDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLARY 372
           M + G+  +E TL  +L ACSHSGLV  G   F  + +G F   P + HY C+VDLL R 
Sbjct: 312 MLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRA 371

Query: 373 GCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEME 412
             +++A+ LIK M  +    +W +LL   R HG +E+ E     L+E++
Sbjct: 372 RLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELK 417

[Close]

BLAST of Clc09G06390 vs. ExPASy Swiss-Prot
Match: Q9SJZ3 (Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E28 PE=2 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 7.2e-69
Identity = 169/536 (31.53%), Postives = 248/536 (46.27%), Query Frame = 0


Query: 13  NRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTC--HRLQLLDSALLFFTHI 72
           N ++S+       +H+ QIQAQ+I+  L  +P  + + I  C     + LD ++     I
Sbjct: 54  NPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGI 113

Query: 73  PNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIF---PNNYTFPFLLKSLADFNDFV 132
            NP++F  N  IR FS SE P     +Y  M R+      P+++T+P L K  AD     
Sbjct: 114 ENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS 173

Query: 133 GGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWTVLIMGYR 192
            G  +  HVLKL      +V N+ + ++ASCG M   +KVFDE P RD+VSW  LI GY+
Sbjct: 174 LGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYK 233

Query: 193 V----------------------------------------------------------- 252
                                                                       
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 293

Query: 253 ---ALM----------------------------------------------FD------ 312
              ALM                                              FD      
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 353

Query: 313 ------------------DALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHE 372
                             DAL  F++MQ +  +P+ +TM++ L+AC+  GA+++G+WIH 
Sbjct: 354 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413

Query: 373 FVKRKGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEE 412
           ++++    ++V LGTSL+DMY KCG I E L VF  ++ +N  T+ A+I GLAL      
Sbjct: 414 YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAST 473

[Close]

BLAST of Clc09G06390 vs. ExPASy Swiss-Prot
Match: Q9FIF7 (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E41 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.6e-68
Identity = 154/428 (35.98%), Postives = 236/428 (55.14%), Query Frame = 0


Query: 15  IISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLLDSALLFFTHIPNPH 74
           +ISV  +  +  H+P I A++I      +  +  + I  C  L  +D A   F+++ NP+
Sbjct: 32  LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPN 91

Query: 75  VFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSLADFNDFVGGQSVHT 134
           V++  ++I  F  S      +S+Y  M  NS+ P+NY    +LK+     D    + +H 
Sbjct: 92  VYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHA 151

Query: 135 HVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWTVLIMGY------RV 194
            VLKLG+ S   V   +M++Y   G++   KK+FDEMP RD V+ TV+I  Y      + 
Sbjct: 152 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 211

Query: 195 AL-MFDD------------------------ALIAFEQMQYAGVEPNRVTMVNALAACAN 254
           AL +F D                        AL  F +MQ   V  N  T V  L+AC++
Sbjct: 212 ALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSD 271

Query: 255 FGAIEMGVWIHEFVKRKGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNAL 314
            GA+E+G W+H FV+ +  E+   +G +LI+MY +CG I E   VF+ M++K+V ++N +
Sbjct: 272 LGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTM 331

Query: 315 IKGLALAKSGEEAIAWFKRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRF 374
           I GLA+  +  EAI  F+ M   G   ++VTLVA+L ACSH GL+D+G ++F S M   F
Sbjct: 332 ISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNS-MKRVF 391

Query: 375 GFSPGIKHYSCMVDLLARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETA 412
              P I+HY C+VDLL R G +EEA+  I+++P E    M G+LLS  + HG++E+ E  
Sbjct: 392 NVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKI 451

[Close]

BLAST of Clc09G06390 vs. ExPASy TrEMBL
Match: A0A1S3BRY1 (pentatricopeptide repeat-containing protein At5g56310-like OS=Cucumis melo OX=3656 GN=LOC103492838 PE=4 SV=1)

HSP 1 Score: 731.9 bits (1888), Expect = 1.5e-207
Identity = 354/411 (86.13%), Postives = 380/411 (92.46%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M PFG QFRAES RI+S+FTTSLS +HIPQIQAQLIL+NLHS+P IAH FINTCH L LL
Sbjct: 1   MRPFGTQFRAESTRILSIFTTSLSPVHIPQIQAQLILRNLHSHPLIAHHFINTCHHLHLL 60

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSA LFFTHIP PHVF+CNSLIRAF+HS IPHTPLSIYTHMNRNSI PNNYTFPF+LKSL
Sbjct: 61  DSAFLFFTHIPKPHVFICNSLIRAFAHSNIPHTPLSIYTHMNRNSISPNNYTFPFVLKSL 120

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           ADF D V GQSVHTHV+KLG+ SD+YV N+LMDVYASCGKMGLCKKVFDEM QRDVVSWT
Sbjct: 121 ADFKDLVSGQSVHTHVVKLGHDSDLYVQNTLMDVYASCGKMGLCKKVFDEMLQRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           +LIMGYRV+LM DDALI FEQMQYAGVEPNRVT+VNALAACA+FGAIEMGVWIHEFVK K
Sbjct: 181 ILIMGYRVSLMLDDALIVFEQMQYAGVEPNRVTIVNALAACASFGAIEMGVWIHEFVKTK 240

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
            WEVDV+LGT+LIDMYGKCGRIKE L VFQAMKEKNVYTWN LI GLALAKSGEEAIAWF
Sbjct: 241 RWEVDVVLGTALIDMYGKCGRIKEALAVFQAMKEKNVYTWNVLINGLALAKSGEEAIAWF 300

Query: 301 KRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLA 360
           KRMDE GVEAD+VTLVAVLCACSHSGLV+ GRQIFRSL++GRFGFSP IKHYSCMVD+LA
Sbjct: 301 KRMDEEGVEADDVTLVAVLCACSHSGLVNSGRQIFRSLIHGRFGFSPEIKHYSCMVDILA 360

Query: 361 RYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEME 412
           R GCIEEAFV+IKDMPFEATKAMWGSLL+GSRAHG+LEVSE AARKLVEME
Sbjct: 361 RNGCIEEAFVMIKDMPFEATKAMWGSLLTGSRAHGNLEVSEIAARKLVEME 411

[Close]

BLAST of Clc09G06390 vs. ExPASy TrEMBL
Match: A0A6J1JWL5 (pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita maxima OX=3661 GN=LOC111488140 PE=4 SV=1)

HSP 1 Score: 731.1 bits (1886), Expect = 2.6e-207
Identity = 359/412 (87.14%), Postives = 382/412 (92.72%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M  FG Q  AESNRI+S+F TSLS IHIPQIQAQLI+QNLHSNPTIAH FINTCH L+LL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHHLRLL 60

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSAL FFT IP PHVFVCNSLIRAFSHS+IPHTPLSIY HMNR SI PNNYTFPFLLKSL
Sbjct: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPHTPLSIYAHMNRTSILPNNYTFPFLLKSL 120

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           ADFN  V GQSVH HV+KLGYVSDVYV NSLMDVYASCG+MGLCKKVFDEMP RDVVSWT
Sbjct: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACA+FGAIEMGVWIH FVKR+
Sbjct: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACASFGAIEMGVWIHAFVKRR 240

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
           GWE+DVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNVYTWNALI GLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300

Query: 301 KRMDE-GGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLL 360
           KRMDE GGVEADEVTLV VLCACSHSGLVD+GRQIF S+++G+FGFSPGI+HYSCMVDLL
Sbjct: 301 KRMDEGGGVEADEVTLVTVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360

Query: 361 ARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEME 412
           AR GCIEE+F LIK+MPF+ATKAMWGSLL+GSRA GSLE+SE AARKLVEME
Sbjct: 361 ARSGCIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEISEFAARKLVEME 412

[Close]

BLAST of Clc09G06390 vs. ExPASy TrEMBL
Match: A0A6J1GP72 (pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita moschata OX=3662 GN=LOC111456251 PE=4 SV=1)

HSP 1 Score: 723.4 bits (1866), Expect = 5.5e-205
Identity = 357/412 (86.65%), Postives = 382/412 (92.72%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M  FG Q  AESNRI+S+F TSLS IHIPQIQAQLI+QNLHSNPTIAH FINTCH L+LL
Sbjct: 1   MAAFGVQMWAESNRILSLFATSLSPIHIPQIQAQLIVQNLHSNPTIAHHFINTCHDLRLL 60

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSAL FFT IP PHVFVCNSLIRAFSHS+IP TPLSIY HMNRNSI PNNYTFPFLLKSL
Sbjct: 61  DSALRFFTQIPKPHVFVCNSLIRAFSHSKIPRTPLSIYAHMNRNSILPNNYTFPFLLKSL 120

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           ADFN  V GQSVH HV+KLGYVSDVYV NSLMDVYASCG+MGLCKKVFDEMP RDVVSWT
Sbjct: 121 ADFNHLVSGQSVHAHVVKLGYVSDVYVQNSLMDVYASCGRMGLCKKVFDEMPLRDVVSWT 180

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           VLIMGYRVALMFDDALIAFEQMQYAGV PNRVTMVNALAACA+FGAIEMGVWIHEFVKR+
Sbjct: 181 VLIMGYRVALMFDDALIAFEQMQYAGVVPNRVTMVNALAACASFGAIEMGVWIHEFVKRR 240

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
           GWE+DVILGTSLIDMYGKCGRI+EGLVVFQAMK+KNVYTWNALI GLALAKSGEEAIAWF
Sbjct: 241 GWEMDVILGTSLIDMYGKCGRIEEGLVVFQAMKDKNVYTWNALINGLALAKSGEEAIAWF 300

Query: 301 KRM-DEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLL 360
           KRM +EGG+EADEVTLVAVLCACSHSGLVD+GRQIF S+++G+FGFSPGI+HYSCMVDLL
Sbjct: 301 KRMNEEGGIEADEVTLVAVLCACSHSGLVDIGRQIFGSMIDGKFGFSPGIQHYSCMVDLL 360

Query: 361 ARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEME 412
           AR G IEE+F LIK+MPF+ATKAMWGSLL+GSRA GSLE+SE AARKLVEME
Sbjct: 361 ARSGRIEESFELIKNMPFDATKAMWGSLLAGSRAQGSLEMSEFAARKLVEME 412

[Close]

BLAST of Clc09G06390 vs. ExPASy TrEMBL
Match: A0A6J1D9C2 (pentatricopeptide repeat-containing protein At5g56310-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018217 PE=4 SV=1)

HSP 1 Score: 721.5 bits (1861), Expect = 2.1e-204
Identity = 353/411 (85.89%), Postives = 379/411 (92.21%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M P  AQ  A+SNRI+S+   SLS IHIPQIQ+QLILQNLHS+  IAH FIN CH L+LL
Sbjct: 3   MKPSAAQLWAQSNRILSLLAASLSPIHIPQIQSQLILQNLHSSTAIAHHFINACHFLRLL 62

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSALLFFTH PNPHVFV NSLIRAFSHS+IPHTPLSIY HMNRNSI PNNYTFPFLLKSL
Sbjct: 63  DSALLFFTHFPNPHVFVFNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKSL 122

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           +DFND VGGQSVHTHV+K G+VSDVYV NSLMDVYASCG+MGLC+KVFDEMPQRDVVSWT
Sbjct: 123 SDFNDLVGGQSVHTHVVKWGFVSDVYVQNSLMDVYASCGRMGLCRKVFDEMPQRDVVSWT 182

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           VLIMGYR  LMFDDAL+AFE MQYAGVEPN VTMVNALAACA +GAIEMGVWIHEFVKR+
Sbjct: 183 VLIMGYRGGLMFDDALVAFEHMQYAGVEPNCVTMVNALAACAGYGAIEMGVWIHEFVKRR 242

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
           GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNV+TWNALIKGLALAKSGEEAIAWF
Sbjct: 243 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVFTWNALIKGLALAKSGEEAIAWF 302

Query: 301 KRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLA 360
           KRMDE GVEADEVTLVAVLCACSHSGLV+ GR+IFR+L++G +GFSPGIKH+SCMVDLLA
Sbjct: 303 KRMDEEGVEADEVTLVAVLCACSHSGLVNKGREIFRALVDGSYGFSPGIKHFSCMVDLLA 362

Query: 361 RYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEME 412
           R GCIEEAFVLIKDMPF+ATKAMWGSLL+G RA+GSLEVSE AARKLVEME
Sbjct: 363 RSGCIEEAFVLIKDMPFDATKAMWGSLLAGGRANGSLEVSEFAARKLVEME 413

[Close]

BLAST of Clc09G06390 vs. ExPASy TrEMBL
Match: A0A6J1D8G0 (pentatricopeptide repeat-containing protein At1g09190-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018217 PE=4 SV=1)

HSP 1 Score: 721.5 bits (1861), Expect = 2.1e-204
Identity = 353/411 (85.89%), Postives = 379/411 (92.21%), Query Frame = 0


Query: 1   MTPFGAQFRAESNRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLL 60
           M P  AQ  A+SNRI+S+   SLS IHIPQIQ+QLILQNLHS+  IAH FIN CH L+LL
Sbjct: 87  MKPSAAQLWAQSNRILSLLAASLSPIHIPQIQSQLILQNLHSSTAIAHHFINACHFLRLL 146

Query: 61  DSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSL 120
           DSALLFFTH PNPHVFV NSLIRAFSHS+IPHTPLSIY HMNRNSI PNNYTFPFLLKSL
Sbjct: 147 DSALLFFTHFPNPHVFVFNSLIRAFSHSKIPHTPLSIYAHMNRNSILPNNYTFPFLLKSL 206

Query: 121 ADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWT 180
           +DFND VGGQSVHTHV+K G+VSDVYV NSLMDVYASCG+MGLC+KVFDEMPQRDVVSWT
Sbjct: 207 SDFNDLVGGQSVHTHVVKWGFVSDVYVQNSLMDVYASCGRMGLCRKVFDEMPQRDVVSWT 266

Query: 181 VLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRK 240
           VLIMGYR  LMFDDAL+AFE MQYAGVEPN VTMVNALAACA +GAIEMGVWIHEFVKR+
Sbjct: 267 VLIMGYRGGLMFDDALVAFEHMQYAGVEPNCVTMVNALAACAGYGAIEMGVWIHEFVKRR 326

Query: 241 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWF 300
           GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNV+TWNALIKGLALAKSGEEAIAWF
Sbjct: 327 GWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVFTWNALIKGLALAKSGEEAIAWF 386

Query: 301 KRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLA 360
           KRMDE GVEADEVTLVAVLCACSHSGLV+ GR+IFR+L++G +GFSPGIKH+SCMVDLLA
Sbjct: 387 KRMDEEGVEADEVTLVAVLCACSHSGLVNKGREIFRALVDGSYGFSPGIKHFSCMVDLLA 446

Query: 361 RYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEME 412
           R GCIEEAFVLIKDMPF+ATKAMWGSLL+G RA+GSLEVSE AARKLVEME
Sbjct: 447 RSGCIEEAFVLIKDMPFDATKAMWGSLLAGGRANGSLEVSEFAARKLVEME 497

[Close]

BLAST of Clc09G06390 vs. TAIR 10
Match: AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 275.8 bits (704), Expect = 5.8e-74
Identity = 158/435 (36.32%), Postives = 239/435 (54.94%), Query Frame = 0


Query: 19  FTTSLSQIH------IPQIQAQLILQNLHSNPTIAHQFINTCHRLQLLDSALLFFTHIPN 78
           F TSL +IH      + Q    +I+  L+ +     +FI  C     L  A   FTH P 
Sbjct: 17  FVTSL-KIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPC 76

Query: 79  PHVFVCNSLIRAFSHSEIPHT---PLSIYTHMNRNSIFPNNYTFPFLLKSLADFNDFVGG 138
           P+ ++ N++IRA S  + P+     +++Y  +      P+ +TFPF+LK     +D   G
Sbjct: 77  PNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFG 136

Query: 139 QSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDV------------- 198
           + +H  V+  G+ S V+V+  L+ +Y SCG +G  +K+FDEM  +DV             
Sbjct: 137 RQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKV 196

Query: 199 --------------------VSWTVLIMGYRVALMFDDALIAFEQMQYAGVEPNRVTMVN 258
                               VSWT +I GY  +    +A+  F++M    VEP+ VT++ 
Sbjct: 197 GEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLA 256

Query: 259 ALAACANFGAIEMGVWIHEFVKRKGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKN 318
            L+ACA+ G++E+G  I  +V  +G    V L  ++IDMY K G I + L VF+ + E+N
Sbjct: 257 VLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERN 316

Query: 319 VYTWNALIKGLALAKSGEEAIAWFKRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFR 378
           V TW  +I GLA    G EA+A F RM + GV  ++VT +A+L ACSH G VD+G+++F 
Sbjct: 317 VVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFN 376

Query: 379 SLMNGRFGFSPGIKHYSCMVDLLARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGS 412
           S M  ++G  P I+HY CM+DLL R G + EA  +IK MPF+A  A+WGSLL+ S  H  
Sbjct: 377 S-MRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHD 436

[Close]

BLAST of Clc09G06390 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 270.4 bits (690), Expect = 2.4e-72
Identity = 156/447 (34.90%), Postives = 234/447 (52.35%), Query Frame = 0


Query: 1   MTPFGAQFRAESN--RIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTC---H 60
           M      F  E N    +S       Q  + QI A+++   L  +     +F++ C    
Sbjct: 1   MNVISCSFSLEHNLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISST 60

Query: 61  RLQLLDSALLFFTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPF 120
               L  A + F     P  F+ N +IR FS S+ P   L +Y  M  +S   N YTFP 
Sbjct: 61  SSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPS 120

Query: 121 LLKSLADFNDFVGGQSVHTHVLKLGYVSDVYVMNSLMDVYA------------------- 180
           LLK+ ++ + F     +H  + KLGY +DVY +NSL++ YA                   
Sbjct: 121 LLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPD 180

Query: 181 ------------SCGKMGLCKKVFDEMPQRDVVSWTVLIMGYRVALMFDDALIAFEQMQY 240
                         GKM +   +F +M +++ +SWT +I GY  A M  +AL  F +MQ 
Sbjct: 181 DVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQN 240

Query: 241 AGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRKGWEVDVILGTSLIDMYGKCGRIKE 300
           + VEP+ V++ NAL+ACA  GA+E G WIH ++ +    +D +LG  LIDMY KCG ++E
Sbjct: 241 SDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEE 300

Query: 301 GLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWFKRMDEGGVEADEVTLVAVLCACSH 360
            L VF+ +K+K+V  W ALI G A    G EAI+ F  M + G++ + +T  AVL ACS+
Sbjct: 301 ALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSY 360

Query: 361 SGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLARYGCIEEAFVLIKDMPFEATKAMW 412
           +GLV+ G+ IF S M   +   P I+HY C+VDLL R G ++EA   I++MP +    +W
Sbjct: 361 TGLVEEGKLIFYS-MERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIW 420

[Close]

BLAST of Clc09G06390 vs. TAIR 10
Match: AT3G47530.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 267.7 bits (683), Expect = 1.6e-71
Identity = 147/409 (35.94%), Postives = 227/409 (55.50%), Query Frame = 0


Query: 13  NRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQL------LDSALLF 72
           + ++S+  +S  ++H+ QI A L+  +L  N  + H F++   RL L      ++ +   
Sbjct: 12  DHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLS---RLALSLIPRDINYSCRV 71

Query: 73  FTHIPNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFP-NNYTFPFLLKSLADFND 132
           F+   NP +  CN++IRAFS S+ P     ++  + RNS  P N  +  F LK      D
Sbjct: 72  FSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGD 131

Query: 133 FVGGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWTVLIMG 192
            +GG  +H  +   G++SD  +M +LMD+Y++C       KVFDE+P+RD VSW VL   
Sbjct: 132 LLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSC 191

Query: 193 YRVALMFDDALIAFEQMQY---AGVEPNRVTMVNALAACANFGAIEMGVWIHEFVKRKGW 252
           Y       D L+ F++M+      V+P+ VT + AL ACAN GA++ G  +H+F+   G 
Sbjct: 192 YLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGL 251

Query: 253 EVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEEAIAWFKR 312
              + L  +L+ MY +CG + +   VF  M+E+NV +W ALI GLA+   G+EAI  F  
Sbjct: 252 SGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNE 311

Query: 313 MDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRFGFSPGIKHYSCMVDLLARY 372
           M + G+  +E TL  +L ACSHSGLV  G   F  + +G F   P + HY C+VDLL R 
Sbjct: 312 MLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRA 371

Query: 373 GCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETAARKLVEME 412
             +++A+ LIK M  +    +W +LL   R HG +E+ E     L+E++
Sbjct: 372 RLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELK 417

[Close]

BLAST of Clc09G06390 vs. TAIR 10
Match: AT2G22410.1 (SLOW GROWTH 1 )

HSP 1 Score: 262.7 bits (670), Expect = 5.1e-70
Identity = 169/536 (31.53%), Postives = 248/536 (46.27%), Query Frame = 0


Query: 13  NRIISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTC--HRLQLLDSALLFFTHI 72
           N ++S+       +H+ QIQAQ+I+  L  +P  + + I  C     + LD ++     I
Sbjct: 54  NPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGI 113

Query: 73  PNPHVFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIF---PNNYTFPFLLKSLADFNDFV 132
            NP++F  N  IR FS SE P     +Y  M R+      P+++T+P L K  AD     
Sbjct: 114 ENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS 173

Query: 133 GGQSVHTHVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWTVLIMGYR 192
            G  +  HVLKL      +V N+ + ++ASCG M   +KVFDE P RD+VSW  LI GY+
Sbjct: 174 LGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYK 233

Query: 193 V----------------------------------------------------------- 252
                                                                       
Sbjct: 234 KIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIP 293

Query: 253 ---ALM----------------------------------------------FD------ 312
              ALM                                              FD      
Sbjct: 294 LVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 353

Query: 313 ------------------DALIAFEQMQYAGVEPNRVTMVNALAACANFGAIEMGVWIHE 372
                             DAL  F++MQ +  +P+ +TM++ L+AC+  GA+++G+WIH 
Sbjct: 354 VVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413

Query: 373 FVKRKGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNALIKGLALAKSGEE 412
           ++++    ++V LGTSL+DMY KCG I E L VF  ++ +N  T+ A+I GLAL      
Sbjct: 414 YIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAST 473

[Close]

BLAST of Clc09G06390 vs. TAIR 10
Match: AT5G59200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 261.5 bits (667), Expect = 1.1e-69
Identity = 154/428 (35.98%), Postives = 236/428 (55.14%), Query Frame = 0


Query: 15  IISVFTTSLSQIHIPQIQAQLILQNLHSNPTIAHQFINTCHRLQLLDSALLFFTHIPNPH 74
           +ISV  +  +  H+P I A++I      +  +  + I  C  L  +D A   F+++ NP+
Sbjct: 32  LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPN 91

Query: 75  VFVCNSLIRAFSHSEIPHTPLSIYTHMNRNSIFPNNYTFPFLLKSLADFNDFVGGQSVHT 134
           V++  ++I  F  S      +S+Y  M  NS+ P+NY    +LK+     D    + +H 
Sbjct: 92  VYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHA 151

Query: 135 HVLKLGYVSDVYVMNSLMDVYASCGKMGLCKKVFDEMPQRDVVSWTVLIMGY------RV 194
            VLKLG+ S   V   +M++Y   G++   KK+FDEMP RD V+ TV+I  Y      + 
Sbjct: 152 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 211

Query: 195 AL-MFDD------------------------ALIAFEQMQYAGVEPNRVTMVNALAACAN 254
           AL +F D                        AL  F +MQ   V  N  T V  L+AC++
Sbjct: 212 ALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSD 271

Query: 255 FGAIEMGVWIHEFVKRKGWEVDVILGTSLIDMYGKCGRIKEGLVVFQAMKEKNVYTWNAL 314
            GA+E+G W+H FV+ +  E+   +G +LI+MY +CG I E   VF+ M++K+V ++N +
Sbjct: 272 LGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTM 331

Query: 315 IKGLALAKSGEEAIAWFKRMDEGGVEADEVTLVAVLCACSHSGLVDMGRQIFRSLMNGRF 374
           I GLA+  +  EAI  F+ M   G   ++VTLVA+L ACSH GL+D+G ++F S M   F
Sbjct: 332 ISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNS-MKRVF 391

Query: 375 GFSPGIKHYSCMVDLLARYGCIEEAFVLIKDMPFEATKAMWGSLLSGSRAHGSLEVSETA 412
              P I+HY C+VDLL R G +EEA+  I+++P E    M G+LLS  + HG++E+ E  
Sbjct: 392 NVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKI 451

The following BLAST results are available for this feature:

BLAST of Clc09G06390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898992.1	2.1e-222	93.43	pentatricopeptide repeat-containing protein At5g56310-like [Benincasa hispida]	[more]
XP_023548659.1	1.7e-208	87.62	pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita pepo subsp...	[more]
XP_008451605.1	3.2e-207	86.13	PREDICTED: pentatricopeptide repeat-containing protein At5g56310-like [Cucumis m...	[more]
XP_022991568.1	5.4e-207	87.14	pentatricopeptide repeat-containing protein At5g56310-like [Cucurbita maxima]	[more]
KAG6575842.1	7.1e-207	87.14	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of Clc09G06390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMA1	8.2e-73	36.32	Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX...	[more]
Q9FJY7	3.4e-71	34.90	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
Q9SN85	2.2e-70	35.94	Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana OX...	[more]
Q9SJZ3	7.2e-69	31.53	Pentatricopeptide repeat-containing protein At2g22410, mitochondrial OS=Arabidop...	[more]
Q9FIF7	1.6e-68	35.98	Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS...	[more]

BLAST of Clc09G06390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BRY1	1.5e-207	86.13	pentatricopeptide repeat-containing protein At5g56310-like OS=Cucumis melo OX=36...	[more]
A0A6J1JWL5	2.6e-207	87.14	pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita maxima O...	[more]
A0A6J1GP72	5.5e-205	86.65	pentatricopeptide repeat-containing protein At5g56310-like OS=Cucurbita moschata...	[more]
A0A6J1D9C2	2.1e-204	85.89	pentatricopeptide repeat-containing protein At5g56310-like isoform X2 OS=Momordi...	[more]
A0A6J1D8G0	2.1e-204	85.89	pentatricopeptide repeat-containing protein At1g09190-like isoform X1 OS=Momordi...	[more]

BLAST of Clc09G06390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56310.1	5.8e-74	36.32	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G66520.1	2.4e-72	34.90	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G47530.1	1.6e-71	35.94	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G22410.1	5.1e-70	31.53	SLOW GROWTH 1	[more]
AT5G59200.1	1.1e-69	35.98	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 147..175 e-value: 1.2E-4 score: 22.1 coord: 177..207 e-value: 0.002 score: 18.3 coord: 351..375 e-value: 0.015 score: 15.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 147..176 e-value: 7.2E-4 score: 17.6 coord: 250..277 e-value: 3.2E-4 score: 18.7 coord: 278..312 e-value: 1.3E-6 score: 26.2
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 275..322 e-value: 4.8E-8 score: 33.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 175..209 score: 9.832344
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 245..275 score: 8.593717
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 276..310 score: 10.676364
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 144..174 score: 8.747175
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 30..134 e-value: 2.0E-8 score: 35.8 coord: 135..227 e-value: 2.0E-20 score: 74.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 342..419 e-value: 1.0E-5 score: 27.2 coord: 228..341 e-value: 3.4E-27 score: 97.7
None	No IPR available	PANTHER	PTHR47924	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 6..412
None	No IPR available	PANTHER	PTHR47924:SF31	SUBFAMILY NOT NAMED	coord: 6..412

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc09G06390.1	Clc09G06390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006749	glutathione metabolic process
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding