Clc09G00720 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCCCCATCAATCACCACCAACACTTCTCCAAATCCACCTCCGCCGCCGTCACAACCACCACTTCCTCCACCACCACCACCACCCAAGCCTGCGCCGCCTGTAAGTACCAACGCCGTAAGTGCGCTCCCGATTGCATTCTCGCCCCTTATTTCCCTCACGATCGTCAACGTCAATTCTTAAACGCTCACAAACTCTTCGGCGTTAGCAATATCACTAAAATCATTAAGAATCTCGATCCGTTTGAGAAGGAAGAAGCAATGCGTACCATTATTTTTCAATCTGATGTTCGATCCGTCGATCCTGTTGGCGGTTGTTATCGGATTATTCGAGACCTTCAACGCCAAATTGAATATAGCAAGGCGGAGCTTGAGATCGTGCTTCATCAATTGGCTATTTGTAAACAGCAGGCCGCTGCTGCTGCGGCTGCTGCTGCGGCCGCTGCGGCTATTCTTGAGGCGGATCCGATGAGTGGATACGGCGGAATCGAGCATCAATTTGTGGAAGGGTATGAAGGGGAAGGGTTTGTAGTTGGGGAAAATGAGAATGGGGAAAGTTTGGAAGATCAGGACGTGGAGGTTTGGGGAATTCAAGATTCGTGTTCTTCATTACAATTGAAACAAGCCGGCTCTGTTCATGATTTTCACGATATCAAGATCGATACAAATAATAATCACCTTCAACAACAACTTAAATTTCAACACGATCGTCATCCTGATCTGGTTCATCAGAGGTTAGTATGATCCCCCCCTTTTTCCCTTCTTGCATGGCACCGATATTACAATTTTTTTAAATTTATTTTATTGTTTCTTTATTATACACAAAGGAAGGATATTTGAAAACACTGAAAAGAAAATGAAAAACTTTTTGTTAATTTTTTATATCCCAAAATATATTTATTTTATTTCAAACTGTTTGTGTGATAAAGAGTTTGGTTTTAAATTGAATTGCAATTGGTAAATAAGTTTTCTTTATCTTTAGAATTATTATGATTTTTTTTTATTGTTTTAATTCTCTAAAGCATTTTGCAATTGGCTACATTTGGCGCCAAAACTACTTTATTATTTTTATATCTTCTTACAAATAACGTTTACCGAACTTTTATCTTGGGCTTAGCCCAAAAAGATAATCTAATAAGGCCCTTAATTTCTTTTATGGGCCAGCCCAATCCTTTGCCTTGATCAAGCCCAATGGACCAAGGAACCCAAGGTCAGTTTTGGAGAGGCAAGCTACAAGACCATTTCTTTTTCTCTCTTTCTTTTCTTTCTAAATTGCAAAAAGTATCCTCAACTTTGCCCTTTGTTGCAAAAATTCAAATGATTTTATCTCTGACATTTCGTAAATGTTGCAATAGAGATCTGGGACAGATGTAGCAGTGTTCTAAATCTTAATTTTCTCCCAACATTCTCATGAGGATATGGTAAAGTCTAGTGGTAGATTTCGTGTTTTCTGCTATGATGTCAAAAGTCACTTCTCCTAAAGCACTTTAAATATTTACTAGTATTTTTACAAATGTTAATATCAATTTTAATTCGAATAGGGTAGAAAAGATCTTTCACCTGTCCAAAAGTCTATAATTTATTATTACAAAATGGGCTCATTTTGCATTCAACCAGCCAGATGGATTAACAATAGATCTGACTAATGGTCAATTTTCAGGCTGAAAAGAATTGGTGACAAAAATAAAGTAAACAGAAAATCTAAATCTTGACTAATTTTGAACTTTGCAGTGAAGAACCTATGCTGAAGATGGACAATGTGATATTGAAAGAAGATTCTGACCCAATACAGCAGGCTCAAGATCAAGAACTTAAAGGTGCTGTAGACACTTTATTTACCTTCCCAGCTTGTGATACTTAGCTTCAAGTCGGCCCTTTCTCCTTCCCCACTATAGTTTTCTTTGATTATTATTTAGTTCACAAATGCCTTTGGAGAAGGTGCAAGGCATCTATAAAAAAGAATGGGGTAAAAATTGAATAAATTACACCCTTCTCCAATATTCTTTCCATGTACTTAGATACATCAGTATACCAATTCATTATTATTTTTTTTTTTCATATTTCACAGGAATTCAAAAATTGTTCATGTTGTCTTATGATTTCCATTTTATTGTTACTAACGACCTCAAATGGTTGACGTTCAAAAGTTAAGACACCTACTCGAGATTGGTGATTTAAACCTCCAAACAAAAAAAGTATAGCTAAAAAAGTGAATATTCAAAGGGCTCATCTAATCTCTTCTCATTAGAGCTTATTACATTAAAGTGGGGAAAGAAACTAACTTGAATCGTTCACGAAAGAATGTTGTAGATGAACATTGGTTCTTTCAGACCAGTTGCTTAGTTTCTCTTTGCTTCTTACTAACAACCTCAAAAGGTTGCAGGTTCGGGGGTTAAGGCACCTGCTCCTGCTTCTTTCCTTGAAGTAG ATGAGCCCCATCAATCACCACCAACACTTCTCCAAATCCACCTCCGCCGCCGTCACAACCACCACTTCCTCCACCACCACCACCACCCAAGCCTGCGCCGCCTGTAAGTACCAACGCCGTAAGTGCGCTCCCGATTGCATTCTCGCCCCTTATTTCCCTCACGATCGTCAACGTCAATTCTTAAACGCTCACAAACTCTTCGGCGTTAGCAATATCACTAAAATCATTAAGAATCTCGATCCGTTTGAGAAGGAAGAAGCAATGCGTACCATTATTTTTCAATCTGATGTTCGATCCGTCGATCCTGTTGGCGGTTGTTATCGGATTATTCGAGACCTTCAACGCCAAATTGAATATAGCAAGGCGGAGCTTGAGATCGTGCTTCATCAATTGGCTATTTGTAAACAGCAGGCCGCTGCTGCTGCGGCTGCTGCTGCGGCCGCTGCGGCTATTCTTGAGGCGGATCCGATGAGTGGATACGGCGGAATCGAGCATCAATTTGTGGAAGGGTATGAAGGGGAAGGGTTTGTAGTTGGGGAAAATGAGAATGGGGAAAGTTTGGAAGATCAGGACGTGGAGGTTTGGGGAATTCAAGATTCGTGTTCTTCATTACAATTGAAACAAGCCGGCTCTGTTCATGATTTTCACGATATCAAGATCGATACAAATAATAATCACCTTCAACAACAACTTAAATTTCAACACGATCGTCATCCTGATCTGGTTCATCAGAGTGAAGAACCTATGCTGAAGATGGACAATGTGATATTGAAAGAAGATTCTGACCCAATACAGCAGGCTCAAGATCAAGAACTTAAAGACCAGTTGCTTAGTTTCTCTTTGCTTCTTACTAACAACCTCAAAAGGTTGCAGGTTCGGGGGTTAAGGCACCTGCTCCTGCTTCTTTCCTTGAAGTAG ATGAGCCCCATCAATCACCACCAACACTTCTCCAAATCCACCTCCGCCGCCGTCACAACCACCACTTCCTCCACCACCACCACCACCCAAGCCTGCGCCGCCTGTAAGTACCAACGCCGTAAGTGCGCTCCCGATTGCATTCTCGCCCCTTATTTCCCTCACGATCGTCAACGTCAATTCTTAAACGCTCACAAACTCTTCGGCGTTAGCAATATCACTAAAATCATTAAGAATCTCGATCCGTTTGAGAAGGAAGAAGCAATGCGTACCATTATTTTTCAATCTGATGTTCGATCCGTCGATCCTGTTGGCGGTTGTTATCGGATTATTCGAGACCTTCAACGCCAAATTGAATATAGCAAGGCGGAGCTTGAGATCGTGCTTCATCAATTGGCTATTTGTAAACAGCAGGCCGCTGCTGCTGCGGCTGCTGCTGCGGCCGCTGCGGCTATTCTTGAGGCGGATCCGATGAGTGGATACGGCGGAATCGAGCATCAATTTGTGGAAGGGTATGAAGGGGAAGGGTTTGTAGTTGGGGAAAATGAGAATGGGGAAAGTTTGGAAGATCAGGACGTGGAGGTTTGGGGAATTCAAGATTCGTGTTCTTCATTACAATTGAAACAAGCCGGCTCTGTTCATGATTTTCACGATATCAAGATCGATACAAATAATAATCACCTTCAACAACAACTTAAATTTCAACACGATCGTCATCCTGATCTGGTTCATCAGAGTGAAGAACCTATGCTGAAGATGGACAATGTGATATTGAAAGAAGATTCTGACCCAATACAGCAGGCTCAAGATCAAGAACTTAAAGACCAGTTGCTTAGTTTCTCTTTGCTTCTTACTAACAACCTCAAAAGGTTGCAGGTTCGGGGGTTAAGGCACCTGCTCCTGCTTCTTTCCTTGAAGTAG MSPINHHQHFSKSTSAAVTTTTSSTTTTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKNLDPFEKEEAMRTIIFQSDVRSVDPVGGCYRIIRDLQRQIEYSKAELEIVLHQLAICKQQAAAAAAAAAAAAAILEADPMSGYGGIEHQFVEGYEGEGFVVGENENGESLEDQDVEVWGIQDSCSSLQLKQAGSVHDFHDIKIDTNNNHLQQQLKFQHDRHPDLVHQSEEPMLKMDNVILKEDSDPIQQAQDQELKDQLLSFSLLLTNNLKRLQVRGLRHLLLLLSLK Homology
BLAST of Clc09G00720 vs. NCBI nr
Match: XP_038899918.1 (LOB domain-containing protein 22 [Benincasa hispida]) HSP 1 Score: 486.9 bits (1252), Expect = 1.3e-133 Identity = 261/286 (91.26%), Postives = 269/286 (94.06%), Query Frame = 0
BLAST of Clc09G00720 vs. NCBI nr
Match: XP_011659803.2 (LOB domain-containing protein 22 [Cucumis sativus] >KGN45524.1 hypothetical protein Csa_015647 [Cucumis sativus]) HSP 1 Score: 465.7 bits (1197), Expect = 3.1e-127 Identity = 252/287 (87.80%), Postives = 262/287 (91.29%), Query Frame = 0
BLAST of Clc09G00720 vs. NCBI nr
Match: XP_022991793.1 (LOB domain-containing protein 29-like [Cucurbita maxima]) HSP 1 Score: 409.1 bits (1050), Expect = 3.4e-110 Identity = 227/294 (77.21%), Postives = 241/294 (81.97%), Query Frame = 0
BLAST of Clc09G00720 vs. NCBI nr
Match: KAG7014013.1 (LOB domain-containing protein 22, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 404.4 bits (1038), Expect = 8.4e-109 Identity = 224/295 (75.93%), Postives = 240/295 (81.36%), Query Frame = 0
BLAST of Clc09G00720 vs. NCBI nr
Match: KAG6575472.1 (LOB domain-containing protein 22, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 402.9 bits (1034), Expect = 2.5e-108 Identity = 222/294 (75.51%), Postives = 240/294 (81.63%), Query Frame = 0
BLAST of Clc09G00720 vs. ExPASy Swiss-Prot
Match: Q9LRW1 (LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.1e-42 Identity = 86/120 (71.67%), Postives = 102/120 (85.00%), Query Frame = 0
BLAST of Clc09G00720 vs. ExPASy Swiss-Prot
Match: Q9SSM9 (LOB domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=LBD7 PE=2 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 3.8e-27 Identity = 56/111 (50.45%), Postives = 82/111 (73.87%), Query Frame = 0
BLAST of Clc09G00720 vs. ExPASy Swiss-Prot
Match: Q9STS6 (LOB domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=LBD27 PE=1 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.6e-25 Identity = 57/110 (51.82%), Postives = 77/110 (70.00%), Query Frame = 0
BLAST of Clc09G00720 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.0e-24 Identity = 60/137 (43.80%), Postives = 91/137 (66.42%), Query Frame = 0
BLAST of Clc09G00720 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.0e-24 Identity = 60/137 (43.80%), Postives = 91/137 (66.42%), Query Frame = 0
BLAST of Clc09G00720 vs. ExPASy TrEMBL
Match: A0A0A0K9M3 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G451300 PE=3 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 1.5e-127 Identity = 252/287 (87.80%), Postives = 262/287 (91.29%), Query Frame = 0
BLAST of Clc09G00720 vs. ExPASy TrEMBL
Match: A0A6J1JXA6 (LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC111488330 PE=3 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 1.7e-110 Identity = 227/294 (77.21%), Postives = 241/294 (81.97%), Query Frame = 0
BLAST of Clc09G00720 vs. ExPASy TrEMBL
Match: A0A6J1GR11 (LOB domain-containing protein 29-like OS=Cucurbita moschata OX=3662 GN=LOC111456336 PE=3 SV=1) HSP 1 Score: 402.9 bits (1034), Expect = 1.2e-108 Identity = 222/294 (75.51%), Postives = 241/294 (81.97%), Query Frame = 0
BLAST of Clc09G00720 vs. ExPASy TrEMBL
Match: A0A1S4E3M5 (LOB domain-containing protein 22 OS=Cucumis melo OX=3656 GN=LOC103500724 PE=3 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 4.2e-98 Identity = 199/218 (91.28%), Postives = 203/218 (93.12%), Query Frame = 0
BLAST of Clc09G00720 vs. ExPASy TrEMBL
Match: A0A6J1HJS2 (protein IAL1-like OS=Cucurbita moschata OX=3662 GN=LOC111464216 PE=3 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 4.5e-84 Identity = 190/271 (70.11%), Postives = 215/271 (79.34%), Query Frame = 0
BLAST of Clc09G00720 vs. TAIR 10
Match: AT3G13850.1 (LOB domain-containing protein 22 ) HSP 1 Score: 175.3 bits (443), Expect = 7.7e-44 Identity = 86/120 (71.67%), Postives = 102/120 (85.00%), Query Frame = 0
BLAST of Clc09G00720 vs. TAIR 10
Match: AT1G72980.1 (LOB domain-containing protein 7 ) HSP 1 Score: 123.6 bits (309), Expect = 2.7e-28 Identity = 56/111 (50.45%), Postives = 82/111 (73.87%), Query Frame = 0
BLAST of Clc09G00720 vs. TAIR 10
Match: AT3G47870.1 (LOB domain-containing protein 27 ) HSP 1 Score: 116.7 bits (291), Expect = 3.3e-26 Identity = 57/110 (51.82%), Postives = 77/110 (70.00%), Query Frame = 0
BLAST of Clc09G00720 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 102.1 bits (253), Expect = 8.3e-22 Identity = 50/128 (39.06%), Postives = 82/128 (64.06%), Query Frame = 0
BLAST of Clc09G00720 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 102.1 bits (253), Expect = 8.3e-22 Identity = 50/128 (39.06%), Postives = 82/128 (64.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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