Clc08G08210 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc08G08210
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	AMMECR1 domain-containing protein
Location	ClcChr08: 19709020 .. 19712893 (+)
RNA-Seq Expression	Clc08G08210
Synteny	Clc08G08210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

atggtgtccgccaacagagagatggtggttttttgtttcgatacccttctcgctcactacaacggcgaggaagcccctccccccgctttcgatggcggtcaacagtaatttctttctccccttttcgtttttatatgtgcgatcatgttctgggatttgtttgcatgtttaggttttagcgtgtgatcgagactgtgttaattttaccgttggtgggtcggtttcgattatgatcatattgatcatcgttattggtttgtgatttcagggtttaattcattttagcaaattgtccattttgttgcttttggtgactgatgaagtgtttttttttcttttttgtttttgtttttttttttaaataattattttgaatatttcaatacaaatgttacatttcaggaacactgaggggagggaacatttaaagtttattataaataataatagttcaattgaattcgatttttgttttttcttttattgctgaattctttctgttttggctccttttcattttctctacaaagtatggtttctcatctaaaactaaaagaatgtattcgctagataatgattaaaaaatggggttgtggtgagtggtgatgaatggtaaaggggaacatctgttttctgtgtggctgccaggaaacccaatttagctacttgtttgtagctaggccgttcctgctacgtaatctgaaaagagcaacttttagtgagcatcacagggtaacgcctagtaaattgaatgtgcaactattttgacatctttttaaaactagatctgcccaagaagcttgttcctgtactttatatctctctctctctctctctctccctccctccctctctctctctctctcttttaattattattatttttccatatatttgcgaaggaaataagaatttgggcttcctcctcatggtaataacttaagaagcacggacattttagtttggctaacgtgtctgtgtcgggcacgtgaacacttcgacacttgttgggctattggacactcattagtgcaagaacttcgttagacttgcatagaacacttgttgagtagactaaaaagacacaagtataacaaataaattttgagtgtgaagtacatcaaactaagttttttaagcagtgcatcaattcatttactctgaattttctttttggtataaaagtgattttttttattttttctttttttaaaatgtatattttaataaatgtgtcattgccgtgttgtatcctagatttttaaaatatgaaatgtcgccatgtccgtgtcgtgttgtacccatgtcttgtatctgtatctgtacctcttaggtaataactaataagtcattgtacgctaattctagtaccatttgtataatgccaaggatctacttcagtgctgttgatgtcattgtttctaattttcctagaaagattaggcatcatctaaactgatgttagtagattataagtcataggttctcgttcaagagttgaggcaatgacatcaagtcctataatggttggttaatctgtatgatgaaatgtgtttctgctaaactaaacattgcttgtcttgaggctgtcttctctgtgcttttagcttatgattatgttttcctgtattcatagctttatcaaactgttgttaacacttgttggtttgacctttactgagtaatgatctttacgtttattgttatgtggtcatatctcagtttattaaacaaaaaggaaaaaaaaaaaagttgtcactggtcttcatacaaagccacgaataatattgtgtgttttctgagacatatctagctatctgtctgtttggttctttacattttgtgtgtgctttcatgtggtcagcataccaatttttcccctttttttgagttcaacaattgcggggtggagattaaaacatcgacttttgtgatggtaattagcatctttatccactgagctgcccagattggctggttagatatacttttgtagatgcttttgtgatgctaacctctcaaaagccttgtgcttcatatctagtatcttctcactatagattgcagctatttttagttcacatgaattttttttttctgccagccccttgttcgttacctggaaaaaagtggtcaatggtggtgaacctcgtttgcgagggtgcataggaactctagaagctcgctgcttgataaatggcttcaaggattatgctttaaataggtattgttgcataatgcatgcttctacctttcatgcactgctttatctaaaaacttcccaaatcagctggttgacccaaatattttggacaaagtatttcacagtatttgtgaatctgcgatgatggtgtttattattgaatttgctgtccatttctgcaagtattgatctctaaatgcatagattgaaattctcaattgaaagttatgtaatgatccaaaagtctgctaatgatgtcctactttgcttgtacaatgatggtggtgcatggtttgcaaccatggtccggcccaactccaagaatttgtacctcactgcttattattaattatgattgtctttgcacatacaataaaggtttgttctgcttacctttgctctggtagtgtaacatgaattaaaaataaatgagacttttcaattcttttgagttagattgggagttaaaagtgtaagatttttcatccaggccaaaaacgcaggagtaatttggattctattgtccttttttactctagtgaccaagcattccacaatttttttccatattctattttactattggaaagcttttctgcaatcctttggcttgtgttgcttccctacctgagttcggctagtggctagatggacaagtagtaaactcccatagtttctaaactccatgggtttaatttttggcagtcatctattgaaggtattaattttctttataaagaaagatttcaaatacaacattatggacgaatagtttgatttgttttttcccttcacgttggagatcttgcatgtataagaactgtatggcattttaaatttagtgtgtgtgtgtgtatgtctgtgtctttaatacgattgctgttgtgagtccttcatcacgttgttgtactttcaagcataccatagagttcctgaatttattacaaatgctgtgggatgtttttgtcagtgatcaaaacaaaggtttcacttaaagtatcatgtgatggagcaagttttttcacgttgccctttccttggctttcttaaatcaaattatataggagaaagtcgatggatgaatgagaagtctatatgcgtgagataagtgatccatactgttgtaagtttgcttcatttaaaactgatttgataaataaaattcagggaaaggagtggtggggagggagctgatttgtttaacgaagttcgagagagaatgaaaagtccattcttaagcgacctacctgatttatatgtaaattattcagattcatgcatgaggctcatttggggggggatgcgagtagaactcacacatgctctctctttttcattgtcatgactaaatgcaattttatttttctatccgttcaacttggcatactgcattggccatctaaagagttagtttgtgattactttcgtcttgaatatattgcagtgcattgagggatcggaggttccccccaatacagcctaaagaattaccatatttggaatgcacagtttccattctagttgattatgaaatagctacaaattatcttgattgggaggtatgtctctgttttgttttgttttgtttttccccttcttaatccaaggtttgtgtttgtgttcagtgagtataatagttggctttggttttctgctctctcacagaattga

mRNA sequence

atggtgtccgccaacagagagatggtggttttttgtttcgatacccttctcgctcactacaacggcgaggaagcccctccccccgctttcgatggcggtcaacaccccttgttcgttacctggaaaaaagtggtcaatggtggtgaacctcgtttgcgagggtgcataggaactctagaagctcgctgcttgataaatggcttcaaggattatgctttaaatagtgcattgagggatcggaggttccccccaatacagcctaaagaattaccatatttggaatgcacagtttccattctagttgattatgaaatagctacaaattatcttgattgggagaattga

Coding sequence (CDS)

atggtgtccgccaacagagagatggtggttttttgtttcgatacccttctcgctcactacaacggcgaggaagcccctccccccgctttcgatggcggtcaacaccccttgttcgttacctggaaaaaagtggtcaatggtggtgaacctcgtttgcgagggtgcataggaactctagaagctcgctgcttgataaatggcttcaaggattatgctttaaatagtgcattgagggatcggaggttccccccaatacagcctaaagaattaccatatttggaatgcacagtttccattctagttgattatgaaatagctacaaattatcttgattgggagaattga

Protein sequence

MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWEN

Homology

[Close]

BLAST of Clc08G08210 vs. NCBI nr
Match: XP_004140906.1 (uncharacterized protein At2g38710 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 6.4e-62
Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 114
           ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE
Sbjct: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 113

[Close]

BLAST of Clc08G08210 vs. NCBI nr
Match: KAE8646635.1 (hypothetical protein Csa_004840 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 6.4e-62
Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 114
           ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE
Sbjct: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 113

[Close]

BLAST of Clc08G08210 vs. NCBI nr
Match: XP_008456604.1 (PREDICTED: uncharacterized protein At2g38710 [Cucumis melo])

HSP 1 Score: 247.3 bits (630), Expect = 6.4e-62
Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 114
           ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE
Sbjct: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 113

[Close]

BLAST of Clc08G08210 vs. NCBI nr
Match: XP_038884933.1 (uncharacterized protein At2g38710 [Benincasa hispida])

HSP 1 Score: 246.9 bits (629), Expect = 8.4e-62
Identity = 111/113 (98.23%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKV+NGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVINGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 114
           ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE
Sbjct: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 113

[Close]

BLAST of Clc08G08210 vs. NCBI nr
Match: KAG6578821.1 (Vesicle-associated membrane protein 727, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243.0 bits (619), Expect = 1.2e-60
Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 1   MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 114
           ARCLINGFKDYALNSALRDRRFPPIQPKELP+LECTVSILVDYEIA NYLDWE
Sbjct: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWE 113

[Close]

BLAST of Clc08G08210 vs. ExPASy Swiss-Prot
Match: Q9ZVJ2 (Uncharacterized protein At2g38710 OS=Arabidopsis thaliana OX=3702 GN=At2g38710 PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 4.8e-52
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREM V+CFDTL++HYN EE PPPAF+   HPLFVTWKK+VNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMAVYCFDTLVSHYNNEETPPPAFEEANHPLFVTWKKIVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 114
           AR LI+GFKDYAL SALRDRRFPPIQ KELP L+CTVS+L DYE A +YLDWE
Sbjct: 61  ARRLISGFKDYALTSALRDRRFPPIQAKELPSLQCTVSVLTDYEDAEDYLDWE 113

[Close]

BLAST of Clc08G08210 vs. ExPASy Swiss-Prot
Match: Q6DCA0 (AMMECR1-like protein OS=Homo sapiens OX=9606 GN=AMMECR1L PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.0e-25
Identity = 55/108 (50.93%), Postives = 70/108 (64.81%), Query Frame = 0


Query: 7   EMVVFCFDTLLAHYNGEEAPP-PAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLI 66
           EM  +CFD L  H  G   P  P F    +PLFVTWK    G + RLRGCIGT  A  L 
Sbjct: 107 EMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFVTWK---TGRDKRLRGCIGTFSAMNLH 166

Query: 67  NGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 114
           +G ++Y L SAL+D RFPP+  +ELP L C+VS+L ++E A++YLDWE
Sbjct: 167 SGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWE 211

[Close]

BLAST of Clc08G08210 vs. ExPASy Swiss-Prot
Match: Q8JZZ6 (AMMECR1-like protein OS=Mus musculus OX=10090 GN=Ammecr1l PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.0e-25
Identity = 55/108 (50.93%), Postives = 70/108 (64.81%), Query Frame = 0


Query: 7   EMVVFCFDTLLAHYNGEEAPP-PAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLI 66
           EM  +CFD L  H  G   P  P F    +PLFVTWK    G + RLRGCIGT  A  L 
Sbjct: 107 EMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFVTWK---TGRDKRLRGCIGTFSAMNLH 166

Query: 67  NGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 114
           +G ++Y L SAL+D RFPP+  +ELP L C+VS+L ++E A++YLDWE
Sbjct: 167 SGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWE 211

[Close]

BLAST of Clc08G08210 vs. ExPASy Swiss-Prot
Match: Q5RDQ3 (AMMECR1-like protein OS=Pongo abelii OX=9601 GN=AMMECR1L PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.0e-25
Identity = 55/108 (50.93%), Postives = 70/108 (64.81%), Query Frame = 0


Query: 7   EMVVFCFDTLLAHYNGEEAPP-PAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLI 66
           EM  +CFD L  H  G   P  P F    +PLFVTWK    G + RLRGCIGT  A  L 
Sbjct: 107 EMCCYCFDVLYCHLYGFPQPRLPRFTNDPYPLFVTWK---TGRDKRLRGCIGTFSAMNLH 166

Query: 67  NGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 114
           +G ++Y L SAL+D RFPP+  +ELP L C+VS+L ++E A++YLDWE
Sbjct: 167 SGLREYTLTSALKDSRFPPLTREELPKLFCSVSLLTNFEDASDYLDWE 211

[Close]

BLAST of Clc08G08210 vs. ExPASy Swiss-Prot
Match: Q9Y4X0 (AMME syndrome candidate gene 1 protein OS=Homo sapiens OX=9606 GN=AMMECR1 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-24
Identity = 55/108 (50.93%), Postives = 68/108 (62.96%), Query Frame = 0


Query: 7   EMVVFCFDTLLAHYNGEEAP-PPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLEARCLI 66
           EM  FCFD L  H  G + P  P F    +PLFVTWK    G + RLRGCIGT  A  L 
Sbjct: 129 EMCCFCFDVLYCHLYGYQQPRTPRFTNEPYPLFVTWK---IGRDKRLRGCIGTFSAMNLH 188

Query: 67  NGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 114
           +G ++Y L SAL+D RFPP+   ELP L C+VS+L ++E   +YLDWE
Sbjct: 189 SGLREYTLTSALKDSRFPPMTRDELPRLFCSVSLLTNFEDVCDYLDWE 233

[Close]

BLAST of Clc08G08210 vs. ExPASy TrEMBL
Match: A0A0A0KCF5 (AMMECR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G046200 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.1e-62
Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 114
           ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE
Sbjct: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 113

[Close]

BLAST of Clc08G08210 vs. ExPASy TrEMBL
Match: A0A1S3C3L7 (uncharacterized protein At2g38710 OS=Cucumis melo OX=3656 GN=LOC103496514 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.1e-62
Identity = 112/113 (99.12%), Postives = 113/113 (100.00%), Query Frame = 0


Query: 1   MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 114
           ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE
Sbjct: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 113

[Close]

BLAST of Clc08G08210 vs. ExPASy TrEMBL
Match: A0A6J1JVT1 (uncharacterized protein At2g38710-like OS=Cucurbita maxima OX=3661 GN=LOC111489324 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 5.9e-61
Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 1   MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 114
           ARCLINGFKDYALNSALRDRRFPPIQPKELP+LECTVSILVDYEIA NYLDWE
Sbjct: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWE 113

[Close]

BLAST of Clc08G08210 vs. ExPASy TrEMBL
Match: A0A6J1FGH3 (uncharacterized protein At2g38710-like OS=Cucurbita moschata OX=3662 GN=LOC111445467 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 5.9e-61
Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = 0


Query: 1   MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREMVV+CFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMVVYCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 114
           ARCLINGFKDYALNSALRDRRFPPIQPKELP+LECTVSILVDYEIA NYLDWE
Sbjct: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPHLECTVSILVDYEIAINYLDWE 113

[Close]

BLAST of Clc08G08210 vs. ExPASy TrEMBL
Match: A0A6J1BWN8 (uncharacterized protein At2g38710 OS=Momordica charantia OX=3673 GN=LOC111006378 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.1e-59
Identity = 107/113 (94.69%), Postives = 111/113 (98.23%), Query Frame = 0


Query: 1   MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREMVV+CFDTLLAHYNGE+APPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMVVYCFDTLLAHYNGEDAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 114
           ARCLINGFKDYALNSALRDRRFPPIQPKELP+LECTVSILVDYE A N+LDWE
Sbjct: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPFLECTVSILVDYETANNHLDWE 113

[Close]

BLAST of Clc08G08210 vs. TAIR 10
Match: AT2G38710.1 (AMMECR1 family )

HSP 1 Score: 204.9 bits (520), Expect = 3.4e-53
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREM V+CFDTL++HYN EE PPPAF+   HPLFVTWKK+VNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMAVYCFDTLVSHYNNEETPPPAFEEANHPLFVTWKKIVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 114
           AR LI+GFKDYAL SALRDRRFPPIQ KELP L+CTVS+L DYE A +YLDWE
Sbjct: 61  ARRLISGFKDYALTSALRDRRFPPIQAKELPSLQCTVSVLTDYEDAEDYLDWE 113

[Close]

BLAST of Clc08G08210 vs. TAIR 10
Match: AT2G38710.2 (AMMECR1 family )

HSP 1 Score: 204.9 bits (520), Expect = 3.4e-53
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 1   MVSANREMVVFCFDTLLAHYNGEEAPPPAFDGGQHPLFVTWKKVVNGGEPRLRGCIGTLE 60
           MVSANREM V+CFDTL++HYN EE PPPAF+   HPLFVTWKK+VNGGEPRLRGCIGTLE
Sbjct: 1   MVSANREMAVYCFDTLVSHYNNEETPPPAFEEANHPLFVTWKKIVNGGEPRLRGCIGTLE 60

Query: 61  ARCLINGFKDYALNSALRDRRFPPIQPKELPYLECTVSILVDYEIATNYLDWE 114
           AR LI+GFKDYAL SALRDRRFPPIQ KELP L+CTVS+L DYE A +YLDWE
Sbjct: 61  ARRLISGFKDYALTSALRDRRFPPIQAKELPSLQCTVSVLTDYEDAEDYLDWE 113

The following BLAST results are available for this feature:

BLAST of Clc08G08210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140906.1	6.4e-62	99.12	uncharacterized protein At2g38710 [Cucumis sativus]	[more]
KAE8646635.1	6.4e-62	99.12	hypothetical protein Csa_004840 [Cucumis sativus]	[more]
XP_008456604.1	6.4e-62	99.12	PREDICTED: uncharacterized protein At2g38710 [Cucumis melo]	[more]
XP_038884933.1	8.4e-62	98.23	uncharacterized protein At2g38710 [Benincasa hispida]	[more]
KAG6578821.1	1.2e-60	97.35	Vesicle-associated membrane protein 727, partial [Cucurbita argyrosperma subsp. ...	[more]

BLAST of Clc08G08210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVJ2	4.8e-52	80.53	Uncharacterized protein At2g38710 OS=Arabidopsis thaliana OX=3702 GN=At2g38710 P...	[more]
Q6DCA0	5.0e-25	50.93	AMMECR1-like protein OS=Homo sapiens OX=9606 GN=AMMECR1L PE=1 SV=1	[more]
Q8JZZ6	5.0e-25	50.93	AMMECR1-like protein OS=Mus musculus OX=10090 GN=Ammecr1l PE=1 SV=1	[more]
Q5RDQ3	5.0e-25	50.93	AMMECR1-like protein OS=Pongo abelii OX=9601 GN=AMMECR1L PE=2 SV=1	[more]
Q9Y4X0	1.9e-24	50.93	AMME syndrome candidate gene 1 protein OS=Homo sapiens OX=9606 GN=AMMECR1 PE=1 S...	[more]

BLAST of Clc08G08210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCF5	3.1e-62	99.12	AMMECR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G046200 PE=...	[more]
A0A1S3C3L7	3.1e-62	99.12	uncharacterized protein At2g38710 OS=Cucumis melo OX=3656 GN=LOC103496514 PE=4 S...	[more]
A0A6J1JVT1	5.9e-61	97.35	uncharacterized protein At2g38710-like OS=Cucurbita maxima OX=3661 GN=LOC1114893...	[more]
A0A6J1FGH3	5.9e-61	97.35	uncharacterized protein At2g38710-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1BWN8	1.1e-59	94.69	uncharacterized protein At2g38710 OS=Momordica charantia OX=3673 GN=LOC111006378...	[more]

BLAST of Clc08G08210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38710.1	3.4e-53	80.53	AMMECR1 family	[more]
AT2G38710.2	3.4e-53	80.53	AMMECR1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002733	AMMECR1 domain	PFAM	PF01871	AMMECR1	coord: 11..106 e-value: 8.0E-24 score: 84.1
IPR002733	AMMECR1 domain	PROSITE	PS51112	AMMECR1	coord: 1..114 score: 18.173677
IPR027485	AMMECR1, N-terminal	GENE3D	3.30.700.20	Hypothetical protein ph0010; domain 1	coord: 4..112 e-value: 3.1E-26 score: 93.4
IPR023473	AMMECR1	PANTHER	PTHR13016	AMMECR1 HOMOLOG	coord: 1..113
None	No IPR available	PANTHER	PTHR13016:SF4	AMMECR1 DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..113
IPR036071	AMMECR1 domain superfamily	SUPERFAMILY	143447	AMMECR1-like	coord: 4..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc08G08210.1	Clc08G08210.1	mRNA