Clc08G02220 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAACTCCTAAATATCAAGACATGGGATCCACCAACCAGACAATTAAAATTTGACAACAATTATAAAATTATTTTCTAGCAGTTTGGACTTAAGTGATATTAGTTTCTAACTTTTGGGATCATAGAAAATATTACCACATCCACCCCTACAAAATTAGTATAAAATCCAACTGCCTCCACACCCAAAGATCAACCCCATCTCAAACCAACTAAAGCCCTCAAAGCCATGGCAGAAGAAGAGCAAGGCCACCACCACCACCACCACCTTTTCCACCACCACAAGGAAGAAGAAGAAAACTCCGGCGTCGTCGACTACGAGAAAGAGAAGAAGCACCACAAGCACCTTGAACACCTCGGCGAGCTCGGTGCCACCGCAGCTGGTGCCTATGCTCTGGTACTTAATCAAATCCTCTTCTTATATGCTTCTCTAAATCCTTTATCAAATAAATTTAAATTATAATTAACCTCGCGGTTTTCTTTCGCTCTCGCAGCATGAGAAGCACGAGGCGAAAAAAGACAGCCAGCACAGCCATGAACACAAGTTAAAGGAGGAAGTCGCGGCTGCGGTGGCTGTCGGGGCTGGGGGATTTGTGCTCCATGAGCATCACGAGAAGAAGGAAGCAAAGAAAGAAGAGAGAGAGGCTGAGGGCAAGGAGCATCACCACCATCTTTTTTGAAAAACTTTCCCTTTCATTTGTATGGGTTTGTTTAATTATTTGTGTGTTTTGGCTTTGTTTGTGATGTTTGGGTTTCAAGAGCTGAATCTCTTCAGTGGTTTGTAAAATAAATTTGAGATGCTTTAGTAAATAATAAGATTGATGTTTTCTTTCATGTACTAATTGGATTGAATATATGTTTGTCTACTTTTTTTTTTTTTAAA CAAACTCCTAAATATCAAGACATGGGATCCACCAACCAGACAATTAAAATTTGACAACAATTATAAAATTATTTTCTAGCAGTTTGGACTTAAGTGATATTAGTTTCTAACTTTTGGGATCATAGAAAATATTACCACATCCACCCCTACAAAATTAGTATAAAATCCAACTGCCTCCACACCCAAAGATCAACCCCATCTCAAACCAACTAAAGCCCTCAAAGCCATGGCAGAAGAAGAGCAAGGCCACCACCACCACCACCACCTTTTCCACCACCACAAGGAAGAAGAAGAAAACTCCGGCGTCGTCGACTACGAGAAAGAGAAGAAGCACCACAAGCACCTTGAACACCTCGGCGAGCTCGGTGCCACCGCAGCTGGTGCCTATGCTCTGCATGAGAAGCACGAGGCGAAAAAAGACAGCCAGCACAGCCATGAACACAAGTTAAAGGAGGAAGTCGCGGCTGCGGTGGCTGTCGGGGCTGGGGGATTTGTGCTCCATGAGCATCACGAGAAGAAGGAAGCAAAGAAAGAAGAGAGAGAGGCTGAGGGCAAGGAGCATCACCACCATCTTTTTTGAAAAACTTTCCCTTTCATTTGTATGGGTTTGTTTAATTATTTGTGTGTTTTGGCTTTGTTTGTGATGTTTGGGTTTCAAGAGCTGAATCTCTTCAGTGGTTTGTAAAATAAATTTGAGATGCTTTAGTAAATAATAAGATTGATGTTTTCTTTCATGTACTAATTGGATTGAATATATGTTTGTCTACTTTTTTTTTTTTTAAA ATGGCAGAAGAAGAGCAAGGCCACCACCACCACCACCACCTTTTCCACCACCACAAGGAAGAAGAAGAAAACTCCGGCGTCGTCGACTACGAGAAAGAGAAGAAGCACCACAAGCACCTTGAACACCTCGGCGAGCTCGGTGCCACCGCAGCTGGTGCCTATGCTCTGCATGAGAAGCACGAGGCGAAAAAAGACAGCCAGCACAGCCATGAACACAAGTTAAAGGAGGAAGTCGCGGCTGCGGTGGCTGTCGGGGCTGGGGGATTTGTGCTCCATGAGCATCACGAGAAGAAGGAAGCAAAGAAAGAAGAGAGAGAGGCTGAGGGCAAGGAGCATCACCACCATCTTTTTTGA MAEEEQGHHHHHHLFHHHKEEEENSGVVDYEKEKKHHKHLEHLGELGATAAGAYALHEKHEAKKDSQHSHEHKLKEEVAAAVAVGAGGFVLHEHHEKKEAKKEEREAEGKEHHHHLF Homology
BLAST of Clc08G02220 vs. NCBI nr
Match: XP_038885614.1 (abscisic stress-ripening protein 2-like [Benincasa hispida]) HSP 1 Score: 208.8 bits (530), Expect = 2.6e-50 Identity = 105/117 (89.74%), Postives = 110/117 (94.02%), Query Frame = 0
BLAST of Clc08G02220 vs. NCBI nr
Match: XP_004138381.1 (abscisic stress-ripening protein 1 [Cucumis sativus] >KGN45862.1 hypothetical protein Csa_005135 [Cucumis sativus]) HSP 1 Score: 189.9 bits (481), Expect = 1.3e-44 Identity = 99/117 (84.62%), Postives = 106/117 (90.60%), Query Frame = 0
BLAST of Clc08G02220 vs. NCBI nr
Match: XP_023514676.1 (abscisic stress-ripening protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 186.8 bits (473), Expect = 1.1e-43 Identity = 102/119 (85.71%), Postives = 108/119 (90.76%), Query Frame = 0
BLAST of Clc08G02220 vs. NCBI nr
Match: NP_001292579.1 (abscisic stress-ripening protein 1-like [Cucumis melo] >AAL27560.1 abscisic acid response protein [Cucumis melo] >AAL27561.1 abscisic acid response protein [Cucumis melo]) HSP 1 Score: 185.7 bits (470), Expect = 2.4e-43 Identity = 99/117 (84.62%), Postives = 105/117 (89.74%), Query Frame = 0
BLAST of Clc08G02220 vs. NCBI nr
Match: KAG6592255.1 (Abscisic stress-ripening protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 185.3 bits (469), Expect = 3.1e-43 Identity = 102/119 (85.71%), Postives = 107/119 (89.92%), Query Frame = 0
BLAST of Clc08G02220 vs. ExPASy Swiss-Prot
Match: P37219 (Abscisic stress-ripening protein 2 OS=Solanum lycopersicum OX=4081 GN=ASR2 PE=3 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 5.5e-35 Identity = 78/115 (67.83%), Postives = 93/115 (80.87%), Query Frame = 0
BLAST of Clc08G02220 vs. ExPASy Swiss-Prot
Match: Q08655 (Abscisic stress-ripening protein 1 OS=Solanum lycopersicum OX=4081 GN=ASR1 PE=2 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 8.7e-33 Identity = 73/102 (71.57%), Postives = 86/102 (84.31%), Query Frame = 0
BLAST of Clc08G02220 vs. ExPASy Swiss-Prot
Match: P37220 (Abscisic stress-ripening protein 3 OS=Solanum lycopersicum OX=4081 GN=ASR3 PE=3 SV=2) HSP 1 Score: 133.3 bits (334), Expect = 1.8e-30 Identity = 72/113 (63.72%), Postives = 89/113 (78.76%), Query Frame = 0
BLAST of Clc08G02220 vs. ExPASy Swiss-Prot
Match: A2ZBV1 (Abscisic stress-ripening protein 5 OS=Oryza sativa subsp. indica OX=39946 GN=ASR5 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.1e-24 Identity = 68/139 (48.92%), Postives = 87/139 (62.59%), Query Frame = 0
BLAST of Clc08G02220 vs. ExPASy Swiss-Prot
Match: Q53JF7 (Abscisic stress-ripening protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=ASR5 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.1e-24 Identity = 68/139 (48.92%), Postives = 87/139 (62.59%), Query Frame = 0
BLAST of Clc08G02220 vs. ExPASy TrEMBL
Match: A0A0A0KBV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014820 PE=3 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 6.1e-45 Identity = 99/117 (84.62%), Postives = 106/117 (90.60%), Query Frame = 0
BLAST of Clc08G02220 vs. ExPASy TrEMBL
Match: Q93VD6 (Abscisic acid response protein OS=Cucumis melo OX=3656 GN=Asr1 PE=2 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43 Identity = 99/117 (84.62%), Postives = 105/117 (89.74%), Query Frame = 0
BLAST of Clc08G02220 vs. ExPASy TrEMBL
Match: A0A6J1IF07 (abscisic stress-ripening protein 2-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111472649 PE=3 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43 Identity = 101/119 (84.87%), Postives = 107/119 (89.92%), Query Frame = 0
BLAST of Clc08G02220 vs. ExPASy TrEMBL
Match: A0A6J1EY46 (abscisic stress-ripening protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111439287 PE=3 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 3.3e-43 Identity = 98/118 (83.05%), Postives = 106/118 (89.83%), Query Frame = 0
BLAST of Clc08G02220 vs. ExPASy TrEMBL
Match: A0A6J1IGC4 (abscisic stress-ripening protein 2-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111472649 PE=3 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 7.4e-43 Identity = 100/119 (84.03%), Postives = 107/119 (89.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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