Clc07G15460 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G15460
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	40S ribosomal protein S8
Location	ClcChr07: 30051079 .. 30053061 (+)
RNA-Seq Expression	Clc07G15460
Synteny	Clc07G15460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTACTTATGCCATAGAACTGAGAGTAAATGGGATCTGGAAAGTGTAAGGCCCTTGAAGACGGATTCTAGAAGAAAATAGATGGGTTTCAGCTGAAAATATAAAGGCCTCAGCTCTATTGGGAAATCTGCTTTAATTGTCAGACTTGAACTCCTCATCTTAGATAGATTTTCCTGCTTTTTACTTTACACGTTTGCTTTTGAAGGTGTAGGTTTTAGGTTCCGGTGGCAGTTTGCTAATACTCTCACTTGTTTCCTAACAGGAATTTTAGACCTTCTCCGCCCGCAAGAGCCCTCCCCTCTCCAAGATGGGTATGTTAGATATATTCATATTGTTTCATTTGTGACTTCGTTTTTCTTTTTGTTAATCTTGGAGGACTTTGTTTATAGGTATTTCACGTGACTCTATGCACAAGAGACGTGCGACAGGAGGAAAGAAGAAAGCTTGGAGGAAGAAGAGAAAGTAACTATCACTGCTCATATTTATTCAAGTGCAATTTTTTTCCTTTGTTTTGCTTCCATTTGCTCAAATGTAGTTGGTAACAGATCCTTGAAAATTTTCAAAATTTTTTCCTTGCCTTCTAGTTTAACAATGCCATTTTTGTAGTTTTTGCTAACATATCAACAAATTTGTGGATAAATGGTGATGTTATTGGCAAGAGTTTGTCATACTTTCTTCTCCAATATAAAATTCATTAAAGCTGAATTAATTTTTATTAGGGATCTCATTCATCTCCTTTGGTAGATTGATGTTCTTTTTTGTTCCAATAACTATCACCATTTTTTCTCAACCAAAGATGCAACTTTCATTTCTCTGTGTTTTTTAAGCCATCCTGATATGTTTCTTTCCCCTCCTTTGTAAAGGTATGAACTTGGAAGGCAACCTGCCAACACTAAGTTGTCCAGTGACAAGTCAATCAGGAGGATCAGAGTCCGTGGTGGTAATGTTAAGTGGCGTGCTTTTAGGCTTGATACTGGAAACTACTCTTGGGGCAGTGAGGCTGTGACCAGAAAGACCCGTATTCTTGATGTGGTGTACAATGCATCTAACAATGAGCTTGTTCGTACTCAAACCTTGGTGAAGAGTGCCATCGTTCAGGTTGATGCAGCACCATTCAAACAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGGAAGAAGAAGACCTCAGCATCTGCCAAGAAGGAAGAGGTAGAGCAAGTTCTGTTGTTCGAGTAGTTGATTGGGTTTATTCAAATCCCTTGTATGAGTAGTTGGTGTGTTTGTAATAGATAATGTTAATCGCATTGTTACAGGTTGAAATAGTATAATATGATACAATTCATGATACATGACAGAACGTGATTTTTATGGTTGATAGGAAGGTGATGCTCCCAGTGAGGAGGTGAAGAAGAGTAACCATGTCCAACGCAAGCTGGAGAAACGTCAGCAGGATCGTAAACTTGACCCTCATATTGAAGAACAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGACCGGGTCAATGTGGCCGAGCAGATGGGTAAGCAGTTGAAATACTTTATGATTCTGCTTCATTTTGTTGTATTCTTGTCGTTTCAAGAAGAGTGTTTGGGGAATTTTGCTGAGATTTAGCTCATTTGTGGCAGATACATCTTGGAGGGTAAAGAGCTTGAGTTCTATATGAAGAAACTTCAAAGGAAGAAGGGAAAAGGAGCTGGTGCTGCATAAATTGTCACCAAGATGTTTTCTCCGTGCGTTTACCATTTCATTGCCCTTTTCTTCTTATGAATACGATTAGTTATTGCAGCTGAGATTAAAGAGTAATTTAGGAACTTCAGTTTTGATGGTGTTAGCTTGTTCAATTACAATACTTCAGTTCTTTTCAAGTTTTTCTTGAACTTTTGATCTTACAAATCGTTTAACAATCACTTGATTCTTGTTACGTCCTCCTGTGATGAAATTGGGATCTCCAGTCCATTCTCTTACAA

mRNA sequence

ATGACTACTTATGCCATAGAACTGAGAGTAAATGGGATCTGGAAAGTACTTGAACTCCTCATCTTAGATAGATTTTCCTGCTTTTTACTTTACACGTTTGCTTTTGAAGGTGTAGGTTTTAGGTTCCGGTGGCAGTTTGCTAATACTCTCACTTGTTTCCTAACAGGAATTTTAGACCTTCTCCGCCCGCAAGAGCCCTCCCCTCTCCAAGATGGGACTTTGTTTATAGGTATTTCACGTGACTCTATGCACAAGAGACGTGCGACAGGAGGAAAGAAGAAAGCTTGGAGGAAGAAGAGAAAGTATGAACTTGGAAGGCAACCTGCCAACACTAAGTTGTCCAGTGACAAGTCAATCAGGAGGATCAGAGTCCGTGGTGGTAATGTTAAGTGGCGTGCTTTTAGGCTTGATACTGGAAACTACTCTTGGGGCAGTGAGGCTGTGACCAGAAAGACCCGTATTCTTGATGTGGTGTACAATGCATCTAACAATGAGCTTGTTCGTACTCAAACCTTGGTGAAGAGTGCCATCGTTCAGGTTGATGCAGCACCATTCAAACAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGGAAGAAGAAGACCTCAGCATCTGCCAAGAAGGAAGAGGAAGGTGATGCTCCCAGTGAGGAGGTGAAGAAGAGTAACCATGTCCAACGCAAGCTGGAGAAACGTCAGCAGGATCGTAAACTTGACCCTCATATTGAAGAACAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGACCGGGTCAATGTGGCCGAGCAGATGGATACATCTTGGAGGGTAAAGAGCTTGAGTTCTATATGAAGAAACTTCAAAGGAAGAAGGGAAAAGGAGCTGGTGCTGCATAAATTGTCACCAAGATGTTTTCTCCGTGCGTTTACCATTTCATTGCCCTTTTCTTCTTATGAATACGATTAGTTATTGCAGCTGAGATTAAAGAGTAATTTAGGAACTTCAGTTTTGATGGTGTTAGCTTGTTCAATTACAATACTTCAGTTCTTTTCAAGTTTTTCTTGAACTTTTGATCTTACAAATCGTTTAACAATCACTTGATTCTTGTTACGTCCTCCTGTGATGAAATTGGGATCTCCAGTCCATTCTCTTACAA

Coding sequence (CDS)

ATGACTACTTATGCCATAGAACTGAGAGTAAATGGGATCTGGAAAGTACTTGAACTCCTCATCTTAGATAGATTTTCCTGCTTTTTACTTTACACGTTTGCTTTTGAAGGTGTAGGTTTTAGGTTCCGGTGGCAGTTTGCTAATACTCTCACTTGTTTCCTAACAGGAATTTTAGACCTTCTCCGCCCGCAAGAGCCCTCCCCTCTCCAAGATGGGACTTTGTTTATAGGTATTTCACGTGACTCTATGCACAAGAGACGTGCGACAGGAGGAAAGAAGAAAGCTTGGAGGAAGAAGAGAAAGTATGAACTTGGAAGGCAACCTGCCAACACTAAGTTGTCCAGTGACAAGTCAATCAGGAGGATCAGAGTCCGTGGTGGTAATGTTAAGTGGCGTGCTTTTAGGCTTGATACTGGAAACTACTCTTGGGGCAGTGAGGCTGTGACCAGAAAGACCCGTATTCTTGATGTGGTGTACAATGCATCTAACAATGAGCTTGTTCGTACTCAAACCTTGGTGAAGAGTGCCATCGTTCAGGTTGATGCAGCACCATTCAAACAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGGAAGAAGAAGACCTCAGCATCTGCCAAGAAGGAAGAGGAAGGTGATGCTCCCAGTGAGGAGGTGAAGAAGAGTAACCATGTCCAACGCAAGCTGGAGAAACGTCAGCAGGATCGTAAACTTGACCCTCATATTGAAGAACAATTCAGCAGTGGTCGTTTGATGGCTTGTATCTCATCAAGACCGGGTCAATGTGGCCGAGCAGATGGATACATCTTGGAGGGTAAAGAGCTTGAGTTCTATATGAAGAAACTTCAAAGGAAGAAGGGAAAAGGAGCTGGTGCTGCATAA

Protein sequence

MTTYAIELRVNGIWKVLELLILDRFSCFLLYTFAFEGVGFRFRWQFANTLTCFLTGILDLLRPQEPSPLQDGTLFIGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTSASAKKEEEGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA

Homology

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BLAST of Clc07G15460 vs. NCBI nr
Match: KAG7029811.1 (40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 426.0 bits (1094), Expect = 2.6e-115
Identity = 216/222 (97.30%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 73  TLFIGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWR 132
           T FIGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWR
Sbjct: 19  TSFIGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWR 78

Query: 133 AFRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQH 192
           AFRLDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQH
Sbjct: 79  AFRLDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQH 138

Query: 193 YGVDIGRKKKTSASAKKEEEGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRL 252
           YGVDIGRKKKT ASAKKEEEGDAP+EEVKKSNHVQRK+EKRQQDRKLDPHIEEQFSSGRL
Sbjct: 139 YGVDIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRL 198

Query: 253 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 295
           MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 199 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 240

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BLAST of Clc07G15460 vs. NCBI nr
Match: XP_022145218.1 (40S ribosomal protein S8 [Momordica charantia])

HSP 1 Score: 421.4 bits (1082), Expect = 6.4e-114
Identity = 215/219 (98.17%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 76  IGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 135
           +GISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 136 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 195
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 196 DIGRKKKTSASAKKEEEGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 255
           DIGRKKKTSASAKKEEEGDAPSEE KKSNHVQRKLEKRQQ+RKLD HIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAPSEEAKKSNHVQRKLEKRQQERKLDAHIEEQFSSGRLMAC 180

Query: 256 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 295
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

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BLAST of Clc07G15460 vs. NCBI nr
Match: XP_022929761.1 (40S ribosomal protein S8-like [Cucurbita moschata] >XP_022929762.1 40S ribosomal protein S8-like [Cucurbita moschata] >XP_022997461.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_022997462.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_023547179.1 40S ribosomal protein S8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 421.0 bits (1081), Expect = 8.4e-114
Identity = 213/219 (97.26%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 76  IGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 135
           +GISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 136 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 195
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 196 DIGRKKKTSASAKKEEEGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 255
           DIGRKKKT ASAKKEEEGDAP+EEVKKSNHVQRK+EKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 256 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 295
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Clc07G15460 vs. NCBI nr
Match: KAG6598870.1 (40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 421.0 bits (1081), Expect = 8.4e-114
Identity = 213/219 (97.26%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 76  IGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 135
           +GISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 136 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 195
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 196 DIGRKKKTSASAKKEEEGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 255
           DIGRKKKT ASAKKEEEGDAP+EEVKKSNHVQRK+EKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTIASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 256 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 295
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Clc07G15460 vs. NCBI nr
Match: XP_008451649.1 (PREDICTED: 40S ribosomal protein S8-like [Cucumis melo] >TYK01356.1 40S ribosomal protein S8-like [Cucumis melo var. makuwa])

HSP 1 Score: 420.2 bits (1079), Expect = 1.4e-113
Identity = 214/219 (97.72%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 76  IGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 135
           +GISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 136 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 195
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 196 DIGRKKKTSASAKKEEEGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 255
           DIGRKKKTSASAKKEEEGDA +EEVKKSNHVQRK+EKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 256 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 295
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

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BLAST of Clc07G15460 vs. ExPASy Swiss-Prot
Match: P49199 (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 374.0 bits (959), Expect = 1.5e-102
Identity = 194/221 (87.78%), Postives = 204/221 (92.31%), Query Frame = 0


Query: 76  IGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 135
           +GISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTKLSS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 136 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 195
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 196 DIGRKKKTSASAKKEEEG---DAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRL 255
           DIGRKKK  A AKK+ EG   +A +EE KKSNHV RKLEKRQQ R LD HIEEQF SGRL
Sbjct: 121 DIGRKKKAPA-AKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRL 180

Query: 256 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 294
           +ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGASA 220

[Close]

BLAST of Clc07G15460 vs. ExPASy Swiss-Prot
Match: Q08069 (40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 373.2 bits (957), Expect = 2.6e-102
Identity = 191/221 (86.43%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 76  IGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 135
           +GISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTKLSS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 136 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 195
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 196 DIGRKKKTSASAKKEEEG---DAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRL 255
           DIGRKKKT A+ K   EG   +A +EE KKSNHV RKLEKR++ R LDPHIEEQF SGRL
Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRL 180

Query: 256 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 294
           +ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK A A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAVA 221

[Close]

BLAST of Clc07G15460 vs. ExPASy Swiss-Prot
Match: O81361 (40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 2.6e-102
Identity = 191/220 (86.82%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 76  IGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 135
           +GISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 136 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 195
           LDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 196 DIGRKKKTSASAK-KEEEGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMA 255
           +IGRKKKT+A+ K   EEG+A +EE KKSNHV  KLEKRQQ R LD HIEEQF  G+L+A
Sbjct: 121 EIGRKKKTAAAKKDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLA 180

Query: 256 CISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 295
           CISSRPGQCG+ADG ILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 CISSRPGQCGKADGDILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]

BLAST of Clc07G15460 vs. ExPASy Swiss-Prot
Match: Q9FIF3 (40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.5e-97
Identity = 184/219 (84.02%), Postives = 197/219 (89.95%), Query Frame = 0


Query: 76  IGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 135
           +GISRDS+HKRRATGGK+K WRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 136 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 195
           LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 196 DIGRKKKTSASAKKEEEGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 255
           DIGRKKK  A           +EEVKKSNHVQRKLE RQ+ R LD H+EEQFSSGRL+AC
Sbjct: 121 DIGRKKKGEA---------VTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLAC 180

Query: 256 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 295
           I+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGAA
Sbjct: 181 IASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]

BLAST of Clc07G15460 vs. ExPASy Swiss-Prot
Match: Q93VG5 (40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 3.3e-97
Identity = 179/221 (81.00%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 76  IGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 135
           +GISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 136 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 195
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 196 DIGRKKKTSASAKKE-EEGD----APSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSG 255
           ++GRKKK+++S KK+ EEG+    A  EEVKKSNH+ RK+  RQ+ R LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 256 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 292
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]

BLAST of Clc07G15460 vs. ExPASy TrEMBL
Match: A0A6J1CVC9 (40S ribosomal protein S8 OS=Momordica charantia OX=3673 GN=LOC111014721 PE=3 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 3.1e-114
Identity = 215/219 (98.17%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 76  IGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 135
           +GISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 136 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 195
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 196 DIGRKKKTSASAKKEEEGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 255
           DIGRKKKTSASAKKEEEGDAPSEE KKSNHVQRKLEKRQQ+RKLD HIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAPSEEAKKSNHVQRKLEKRQQERKLDAHIEEQFSSGRLMAC 180

Query: 256 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 295
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Clc07G15460 vs. ExPASy TrEMBL
Match: A0A6J1K537 (40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111492371 PE=3 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 4.1e-114
Identity = 213/219 (97.26%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 76  IGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 135
           +GISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 136 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 195
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 196 DIGRKKKTSASAKKEEEGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 255
           DIGRKKKT ASAKKEEEGDAP+EEVKKSNHVQRK+EKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 256 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 295
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Clc07G15460 vs. ExPASy TrEMBL
Match: A0A6J1EP23 (40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111436251 PE=3 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 4.1e-114
Identity = 213/219 (97.26%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 76  IGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 135
           +GISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 136 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 195
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 196 DIGRKKKTSASAKKEEEGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 255
           DIGRKKKT ASAKKEEEGDAP+EEVKKSNHVQRK+EKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 256 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 295
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Clc07G15460 vs. ExPASy TrEMBL
Match: A0A5D3BT12 (40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00420 PE=3 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 6.9e-114
Identity = 214/219 (97.72%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 76  IGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 135
           +GISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 136 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 195
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 196 DIGRKKKTSASAKKEEEGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 255
           DIGRKKKTSASAKKEEEGDA +EEVKKSNHVQRK+EKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 256 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 295
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Clc07G15460 vs. ExPASy TrEMBL
Match: A0A1S3BRZ4 (40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103492879 PE=3 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 6.9e-114
Identity = 214/219 (97.72%), Postives = 217/219 (99.09%), Query Frame = 0


Query: 76  IGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 135
           +GISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 136 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 195
           LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 196 DIGRKKKTSASAKKEEEGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 255
           DIGRKKKTSASAKKEEEGDA +EEVKKSNHVQRK+EKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 256 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 295
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Clc07G15460 vs. TAIR 10
Match: AT5G59240.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 357.5 bits (916), Expect = 1.1e-98
Identity = 184/219 (84.02%), Postives = 197/219 (89.95%), Query Frame = 0


Query: 76  IGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 135
           +GISRDS+HKRRATGGK+K WRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 136 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 195
           LDTGN+SWGSEAVTRKTRILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 196 DIGRKKKTSASAKKEEEGDAPSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSGRLMAC 255
           DIGRKKK  A           +EEVKKSNHVQRKLE RQ+ R LD H+EEQFSSGRL+AC
Sbjct: 121 DIGRKKKGEA---------VTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLAC 180

Query: 256 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 295
           I+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGAA
Sbjct: 181 IASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]

BLAST of Clc07G15460 vs. TAIR 10
Match: AT5G20290.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 356.3 bits (913), Expect = 2.4e-98
Identity = 179/221 (81.00%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 76  IGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 135
           +GISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 136 LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 195
           LDTGNYSWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 196 DIGRKKKTSASAKKE-EEGD----APSEEVKKSNHVQRKLEKRQQDRKLDPHIEEQFSSG 255
           ++GRKKK+++S KK+ EEG+    A  EEVKKSNH+ RK+  RQ+ R LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 256 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 292
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

The following BLAST results are available for this feature:

BLAST of Clc07G15460 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029811.1	2.6e-115	97.30	40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022145218.1	6.4e-114	98.17	40S ribosomal protein S8 [Momordica charantia]	[more]
XP_022929761.1	8.4e-114	97.26	40S ribosomal protein S8-like [Cucurbita moschata] >XP_022929762.1 40S ribosomal...	[more]
KAG6598870.1	8.4e-114	97.26	40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_008451649.1	1.4e-113	97.72	PREDICTED: 40S ribosomal protein S8-like [Cucumis melo] >TYK01356.1 40S ribosoma...	[more]

BLAST of Clc07G15460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P49199	1.5e-102	87.78	40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 S...	[more]
Q08069	2.6e-102	86.43	40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2	[more]
O81361	2.6e-102	86.82	40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1	[more]
Q9FIF3	1.5e-97	84.02	40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1	[more]
Q93VG5	3.3e-97	81.00	40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1	[more]

BLAST of Clc07G15460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVC9	3.1e-114	98.17	40S ribosomal protein S8 OS=Momordica charantia OX=3673 GN=LOC111014721 PE=3 SV=...	[more]
A0A6J1K537	4.1e-114	97.26	40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111492371 PE=3 SV=1	[more]
A0A6J1EP23	4.1e-114	97.26	40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111436251 PE=3 SV=1	[more]
A0A5D3BT12	6.9e-114	97.72	40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BRZ4	6.9e-114	97.72	40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103492879 PE=3 SV=1	[more]

BLAST of Clc07G15460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59240.1	1.1e-98	84.02	Ribosomal protein S8e family protein	[more]
AT5G20290.1	2.4e-98	81.00	Ribosomal protein S8e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022309	Ribosomal protein S8e/ribosomal biogenesis NSA2	PFAM	PF01201	Ribosomal_S8e	coord: 77..271 e-value: 1.1E-54 score: 184.3
None	No IPR available	GENE3D	3.10.290.70		coord: 107..235 e-value: 2.3E-39 score: 136.2 coord: 236..289 e-value: 2.0E-17 score: 65.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..242
None	No IPR available	PANTHER	PTHR10394:SF18	40S RIBOSOMAL PROTEIN S8	coord: 76..292
None	No IPR available	CDD	cd11380	Ribosomal_S8e_like	coord: 80..271 e-value: 4.26686E-61 score: 188.497
IPR001047	Ribosomal protein S8e	TIGRFAM	TIGR00307	TIGR00307	coord: 77..273 e-value: 1.7E-45 score: 152.2
IPR001047	Ribosomal protein S8e	PANTHER	PTHR10394	40S RIBOSOMAL PROTEIN S8	coord: 76..292
IPR018283	Ribosomal protein S8e, conserved site	PROSITE	PS01193	RIBOSOMAL_S8E	coord: 86..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G15460.2	Clc07G15460.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome