Clc07G00570 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc07G00570
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Tryptophan synthase
Location	ClcChr07: 590651 .. 596419 (+)
RNA-Seq Expression	Clc07G00570
Synteny	Clc07G00570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAACGAGTAAAACCAACAAAAAGTGAACATACAAAAAGTATTGAGCCGCCAAAATTTCTCCTCAGGTTTCTTGTAAGCCCTCGAGACAAATCAGCAGAACAGTGGCTATGGAATCGCCGTAAGTTCAATTCCGGACAAACCAAGGACGGCCCAATAGAGCTCCCTTCCCCTTTTGATTATCGCTGTCATTGAAAATCGAAACTGAACTTCTCAGGTTCAATATAAGGTAAGATTTCATTTTCTTTCCATATTTGAATTTGAATTTTTTTTTTTATAAACTAAATTAAACTTTAATCGCACACAAAACTCATTTGTCAATCCAAAATTCCACCAAACCCTCTCTTGTTTTGCTTCGAATTTGAAACTCAGTGAACTCCCGACCTTCGTTTAGCTCCAAATGGACATTGCTTTCAATTCTTCGAGGTTACTTCCATTCAACAAGATACCCACTACCCTTATCTTTCCCCCTCATCCTTGTAAGATTTCAGTCTTCCAATCCAAGCGGTTTGTTCCAATGGCTGCCCTTACAGCCTCCCCTGCTGTAGGACTGTCCGAAACATTCAGCAAATTGAAGCAACAAGGCAAGGTAAATTTTTCTTACCATCTACTCTCTCCAACTTTGATTTTGACATTTCGTTTCTGGTTTGTTACTTTATTTTTGTCCTTGTTTGGTTTGTTGAATGAGATTTTTGAACGGTTGTCCCATTCTCAGACCCCTAAACGATGAATGATCCACCCAAAAACAAATGAAAACTAAACCTTTGTTTACGTTAAAGCGCCCTACTGTATTTTATATAGTATAAATAGTATTGCATTAGGCACGACTCTTTTGTTATAGGCCTGATGGTCATGTTTAATACGATCTTCATTTTTCTCCATTCCACCGCTATATTCCATGGCGATATTCCATGGCGAAAACACAACAAAGTTGCTAACAAAAGAAAACCTCATCACCGTTGCTAACAATATAGCCTTGTGAAAGAAGAGAAAGATGAGAATAGGAGATTCCAAGTCGATGATAATTGTGGAACATGATTCCATTGAGGAGTTCAACGGAAAAGCAGCAGCCACAGGGGCAATAGCTCCACCACCGTGGCTGTTAACATCAAGGAGGGGAGGAGTAAATGAATTCAGATTCTGAGAGGGTTGTCTATATGGTCGATTCTGGAGCTCCAAAAGCTATAAATTCAATTGTTAGCAACTTTCCTGTGCTTTCGCCATGGAATATTGCGTGAAGTGGCAAAAGCTTGAGAAAAATGAAAATCGCGATAGACATGGCCTTCGAGTTAGGGCTATGATATAAGAGACACCCCTAACAAGATACTATATAAAATGCAGTAGTGCACTTTGACGTAAGCAAAATGTTAGTTTTCATTTGTTGTTGGGGGTGAGGGTCATTGATCATTAGGGCACTTGGGAGAGGGTCATCCGTACAAAAATCTCTGGTTGAATTATGCTTCTGCCGCATTTTGGGGCCGACTGTTTGAATCTGTGGAGAGTCCTCGTTTCAACTCAATTCTGATAAATTCAAGTCTTTACTGGGTTAAATCTTCTAATTGGATTCCTTTTTCAAGTTATTTCCACTAATGCTTAATTGGGATTGATCATGTGAAGGGTTAGAGTTGGTCTCATAGTTTATGGTCTATTTCAAACAATGGGGTGAGTTTTTTTCGTTGGCCAATATTGTCTTAAATACGTGGTTGTTTTTGTTTTACAGGTCGCATTTATCCCCTACATCACTGCTGGTGATCCTGATCTTTCCACCACGGCTGAAGCCCTGAAGGTGCTTTCCACTTATGGATCAGATATAATTGAACTTGGTGTTCCGTATTCAGATCCCTTGGCAGATGGTCCTGTTATACAGGTTGCATCTCGCTCTCTCTTTCTCTCTCTTCATTTCTCCATTTTTAATGTATTGTTCCTTATTCAGTTGTCTTATGAATGTTTTTCTTTAGGCTGCGGCTACTCGGTCCTTGGCTAGGGGTACAAACTTTAGTGCAATAATTTCTATGCTGAAGGAGGTAATATCATTGTACCATGCAACATGCTGTAGACAATATCAATGCCTTTTCCTCTTCCACTTTTGGTCCTGTCTGTATATGCTTCACTGCCCTTTAGTTTCTCATTAACGGAATTGAAAGTTGACACGTTTTTGTTTTGTTTCCGGCTGCTTAGGTTATTCCTGAACTGTCTTGCCCAATTGCCCTTTTTTCATACTATAACCCAATTCTTAAGCGTGGCATTGGGAACTTCATGATGACAATAAAAGATGCTGGTGTACGAGGTAAGTAATGAATTCACAGATCTTTCATAATCAATTATGTTATACACTTCAACTTTTTTCTGCCCTAATTTCAAGATAACATGACAAGGCTAGGCCAATTGTCAGGCTCCAAATGTTAGTGTTGGCCTTTGCTCTAACTTGCATCGAAATACTGGTTGTATTTACTGAGAATATCATTACATTGTAAATTTCTTTTTCCCAATGAATGGTACAAAGTTGAAGTATGTATTAGAAAACAAGTAGGGGGTGTTTGGGGGACTGTAATGGGATAGAATTGTAATGTAATGTAATCCAAAATCAATGTGTGGATTGAGCGTTTTAGACTCGATTTGTAATACAAGAGACGTTCCGTTCCGACAATTTTCAACCCAATCCTATTTCCTACCGTTTTCACGCTTTATGATCTCATTTTCGTTTCTTCCTTGAGTCCTCACGCGTTCTAATACTTTTCTGATTTCCAATAGTCCTATTACATTCCAGCTCCCCTTATGGTTTTGGACATGTTATGTCATTGGTTAATGAACATAATATTCTAAAATCCTTGTTTTGAATTTACTTTCTTTGTGCACCTGGTGTGTGATCTACTGAGCTTGTTTCTCTAATCATGAATTTTGTGACATTTGGTTGAGTTGTATTTGGAAACAAGAAAGAACTCTTTGTCTCTTTATGAGAAAAGAAAGGACAGAGACATATGGGAATATTATGCGTCTTTTTCACTATTATGCAATTATCTAACTTAAAATCGTTAACTTCATAAAGAGTTGATGACTATTTAAAAGTGAATAATGTAAGATTGAAATGATTGTGTGGTACACCTTTACTTATGCTATTAGTTAAATCAGTGGCAATATTTGAACTTACTCTAAAATGGGGATACTGTATCGAATGCTACCTAGAGAATTGTATGAGTTTCATTATATTTTTACATGTTCTATATGATAACCTTAATGTAATACTTCTAGCTTTACAAAGTTCCAAGGAAAGACACTGTTCTTAACCGTAGGTTCATGAATATGTTGGTAGTTACATTTCACTTTCTTGCAGGGCTTGTTGTTCCGGATGTTCCTCTTGAGGAGACTGAAATTTTGAGAAAAGAAGCTGTAAAGCACAATATTGAGCTGGTGAATTCCTTCGCTCATATGGCTGTATAATCTAAATTGATTACTAGTGATGGGTTTTGATATTTATTTATGATTTTAACTTGAAGATATTGACCATAGTGGTAAATGGTCTCTGATAACTGCTCCATTGATTCCGCACACAAATTATCGACATAGTTTGTAGATCTGAAGATTAGTATATTATTAAGTATAATTAATTGGTTGAACCGGCAGAATATGTAGTTTTCTTGATCATGATTGTTAAGGCAGAAAACAGTTGCCTTCATTGCTGGAAATTATTTTATTGTTGAACTGTAATGCCCTGCATTATTTTCATCATCTCTAGAATTAAATTATTGAGGAAATAAGTAGCAATTCATTGAGCCGTTCTTATTTGACGTAATTATACATCATTAGTTTGTTATACATTATCCATTTCTGTCCTAATGCTTTGTTCACGAAGTCAGAAGAAGAGACAGAGTGTATTGTTTCAAGATATTTGCTTGTCCTTATGCATTTTTTACACTGCTAAAGGTACTCTTAACTACACCAACCACGCCTAAAGATAGGATGAAAGCCATCGTTGAAGCTTCAGAGGGATTTGTATATCTTGTAAGAAAATTTTCTGTTTTTATCTCTACAAATGCAAATAGTTCTGGTGTTTTTCATCTCATTTTGAGGCTTCTTGTGATGTCACACTCATAAATTATTATTATTACTTTTGGGATTCAATGTTCAAAATTAATTTAAATACATGAGAATTAATATAAGGAGGGGAAATGTGTTCATGGTGTCATCAACATTTTTTTTCTTGAAATTGTCTTGCTAGTACTTATATCACGACTGCATATTTGGAGTATTCCAAGATTCTTTTCAGAATAGTATTTTAACAACATGATTATTAATGAGACTTTCTACATAGTGATATACATAAAAGGTAAGCAAGTTTAGATTTCTCATTCTCAACGTATATATACAAGATCATTACCGAAGTTCTAGCTGAAAGACTTAAAACGGTTCTGTCCAACTTGATTACTGAATTTTAACCTTTCATTGAGAGAAGATAAATCACTGATTAGGAAAACAAAAGTATAATCTTCAAATTTGGACCTTGAAAAGGCTTTTAATGAAGTTGATTAGAGCTTTTTAGATGCTATCTTGTAGCCAAGCCTTGGTTCTTGACAAATATGTTGGATCATTGTTTGTCTTTATGCTGTCAATTTTATTGTTATCATACTTGAATTGGGAAGAAGAATAAGGTTATTGTATTTCTTCTCTCACTTCTAAAACAAATACAAGATTTTTAGAAGACCATCAACCAATAAGAAAAGAAATATCACATAAAATATATGTATAATATACAACCAGCAGTAGATATAAAGGAAATCCAACAATCATCCATGGAAAACCAAAAGGGAAGATTAAGGCTTTTGGAGGCGTCTTCTGTTTTGTGGGAGCATATTGTTTTTATCGCCGTGTGCTTTGTTTCAGCGCACCAATAGAATGATAGATTGCATTGAAAGAGCAAGTATTTTGGTGAAGTTAGTGAAATACTGTTATTCTCTATGTTAGTTCTTGTATTATCATCCCATTGAGATTAAGTCAAAATTACGATGTTCATTTCTGTCAGAATTGCAATATGAAATTTGTTTTCGTTCAATTATAGGTGAGCTCTGTTGGAGTTACTGGCGCCCGTGCATCAGTAAGTGAGAAAGTTCAAATTCTCCTTGAGGAAATCAAAGAGGTGTGTCATCTTAATAACTACCAATGACATACTTGTAATAGTTGTGCACTTTGAAAGCTGTTGGCATTTGAAACCAGGCAATAACATAAGCCTCATACTCTACTTTGTTTGACAGGTAACGGAAAAACCAGTGGCAGTAGGTTTCGGTATATCAAAACCGGAGCACGTGAAACAGGTAAACGAATTTCATCATACATGGAAACAATACATTCGTCATGCATTTTCTTTCGATAAAACGTTGTGGTGTTTGTCCATAGGTGGCTAGCTGGGGGGCTGATGGTATCATAGTTGGTAGTGCTATGGTGAAGCTGTTGGGTGAAGCCCAGTCTCCTGAAGAAGGATTGAAGGCACTTGAAAACTTCACCAAATCCTTAAAATCTGCACTGTCGTAATAAATTTTGATGGTATAACTCAGGCTGTTCCTTTCATTTGTAAACAAGAGATCAACTAAGCCTGCTAGTGGTTAACAGCCATCTTTGAAAGATTTCTTTGTTCCTTTTAAAATAATAAGACTGTTAGTTTATATTATCATGAGAATATTTTCTAGATTTTTCTTGGTAATCACTGGATGATGATTAAGAGAATAATATTTCAAAGCTTTAATGCATAATCATTGTCAATGAGGCCCAACTGCC

mRNA sequence

AAAAAAAAACGAGTAAAACCAACAAAAAGTGAACATACAAAAAGTATTGAGCCGCCAAAATTTCTCCTCAGGTTTCTTGTAAGCCCTCGAGACAAATCAGCAGAACAGTGGCTATGGAATCGCCGTAAGTTCAATTCCGGACAAACCAAGGACGGCCCAATAGAGCTCCCTTCCCCTTTTGATTATCGCTGTCATTGAAAATCGAAACTGAACTTCTCAGGTTCAATATAAGTGAACTCCCGACCTTCGTTTAGCTCCAAATGGACATTGCTTTCAATTCTTCGAGGTTACTTCCATTCAACAAGATACCCACTACCCTTATCTTTCCCCCTCATCCTTGTAAGATTTCAGTCTTCCAATCCAAGCGGTTTGTTCCAATGGCTGCCCTTACAGCCTCCCCTGCTGTAGGACTGTCCGAAACATTCAGCAAATTGAAGCAACAAGGCAAGGTCGCATTTATCCCCTACATCACTGCTGGTGATCCTGATCTTTCCACCACGGCTGAAGCCCTGAAGGTGCTTTCCACTTATGGATCAGATATAATTGAACTTGGTGTTCCGTATTCAGATCCCTTGGCAGATGGTCCTGTTATACAGGCTGCGGCTACTCGGTCCTTGGCTAGGGGTACAAACTTTAGTGCAATAATTTCTATGCTGAAGGAGGTTATTCCTGAACTGTCTTGCCCAATTGCCCTTTTTTCATACTATAACCCAATTCTTAAGCGTGGCATTGGGAACTTCATGATGACAATAAAAGATGCTGGTGTACGAGGGCTTGTTGTTCCGGATGTTCCTCTTGAGGAGACTGAAATTTTGAGAAAAGAAGCTGTAAAGCACAATATTGAGCTGGTGAATTCCTTCGCTCATATGGCTGTACTCTTAACTACACCAACCACGCCTAAAGATAGGATGAAAGCCATCGTTGAAGCTTCAGAGGGATTTGTATATCTTGTGAGCTCTGTTGGAGTTACTGGCGCCCGTGCATCAGTAAGTGAGAAAGTTCAAATTCTCCTTGAGGAAATCAAAGAGGTAACGGAAAAACCAGTGGCAGTAGGTTTCGGTATATCAAAACCGGAGCACGTGAAACAGGTGGCTAGCTGGGGGGCTGATGGTATCATAGTTGGTAGTGCTATGGTGAAGCTGTTGGGTGAAGCCCAGTCTCCTGAAGAAGGATTGAAGGCACTTGAAAACTTCACCAAATCCTTAAAATCTGCACTGTCGTAATAAATTTTGATGGTATAACTCAGGCTGTTCCTTTCATTTGTAAACAAGAGATCAACTAAGCCTGCTAGTGGTTAACAGCCATCTTTGAAAGATTTCTTTGTTCCTTTTAAAATAATAAGACTGTTAGTTTATATTATCATGAGAATATTTTCTAGATTTTTCTTGGTAATCACTGGATGATGATTAAGAGAATAATATTTCAAAGCTTTAATGCATAATCATTGTCAATGAGGCCCAACTGCC

Coding sequence (CDS)

ATGGACATTGCTTTCAATTCTTCGAGGTTACTTCCATTCAACAAGATACCCACTACCCTTATCTTTCCCCCTCATCCTTGTAAGATTTCAGTCTTCCAATCCAAGCGGTTTGTTCCAATGGCTGCCCTTACAGCCTCCCCTGCTGTAGGACTGTCCGAAACATTCAGCAAATTGAAGCAACAAGGCAAGGTCGCATTTATCCCCTACATCACTGCTGGTGATCCTGATCTTTCCACCACGGCTGAAGCCCTGAAGGTGCTTTCCACTTATGGATCAGATATAATTGAACTTGGTGTTCCGTATTCAGATCCCTTGGCAGATGGTCCTGTTATACAGGCTGCGGCTACTCGGTCCTTGGCTAGGGGTACAAACTTTAGTGCAATAATTTCTATGCTGAAGGAGGTTATTCCTGAACTGTCTTGCCCAATTGCCCTTTTTTCATACTATAACCCAATTCTTAAGCGTGGCATTGGGAACTTCATGATGACAATAAAAGATGCTGGTGTACGAGGGCTTGTTGTTCCGGATGTTCCTCTTGAGGAGACTGAAATTTTGAGAAAAGAAGCTGTAAAGCACAATATTGAGCTGGTGAATTCCTTCGCTCATATGGCTGTACTCTTAACTACACCAACCACGCCTAAAGATAGGATGAAAGCCATCGTTGAAGCTTCAGAGGGATTTGTATATCTTGTGAGCTCTGTTGGAGTTACTGGCGCCCGTGCATCAGTAAGTGAGAAAGTTCAAATTCTCCTTGAGGAAATCAAAGAGGTAACGGAAAAACCAGTGGCAGTAGGTTTCGGTATATCAAAACCGGAGCACGTGAAACAGGTGGCTAGCTGGGGGGCTGATGGTATCATAGTTGGTAGTGCTATGGTGAAGCTGTTGGGTGAAGCCCAGTCTCCTGAAGAAGGATTGAAGGCACTTGAAAACTTCACCAAATCCTTAAAATCTGCACTGTCGTAA

Protein sequence

MDIAFNSSRLLPFNKIPTTLIFPPHPCKISVFQSKRFVPMAALTASPAVGLSETFSKLKQQGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMMTIKDAGVRGLVVPDVPLEETEILRKEAVKHNIELVNSFAHMAVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARASVSEKVQILLEEIKEVTEKPVAVGFGISKPEHVKQVASWGADGIIVGSAMVKLLGEAQSPEEGLKALENFTKSLKSALS

Homology

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BLAST of Clc07G00570 vs. NCBI nr
Match: XP_038888258.1 (tryptophan synthase alpha chain-like isoform X1 [Benincasa hispida])

HSP 1 Score: 569.3 bits (1466), Expect = 2.1e-158
Identity = 299/320 (93.44%), Postives = 306/320 (95.62%), Query Frame = 0


Query: 1   MDIAFNSSRLLPFNKIPTTLIFPPHPCKISVFQSKRFVPMAALTASPAVGLSETFSKLKQ 60
           MDI+FNSSRLL FNKIPTTLIFP HPCKISVFQ+KRFVPMAALTASPAVGLSETFSKLK+
Sbjct: 1   MDISFNSSRLLRFNKIPTTLIFPTHPCKISVFQTKRFVPMAALTASPAVGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLST+GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMMTIKDAGVRGLVVPDVPLE 180
            GTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMM IKDAGVRGLVVPDVPLE
Sbjct: 121 TGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMMIIKDAGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKHNIELVNSFAHMAVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGAR 240
           ETEILRKEAVKHNIEL        VLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGAR
Sbjct: 181 ETEILRKEAVKHNIEL--------VLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGAR 240

Query: 241 ASVSEKVQILLEEIKEVTEKPVAVGFGISKPEHVKQVASWGADGIIVGSAMVKLLGEAQS 300
            SV++KVQ LLEEIKEVTEKPVAVGFGISKPEHVKQVASWGADGIIVGSAMVKLLGEAQS
Sbjct: 241 TSVNDKVQTLLEEIKEVTEKPVAVGFGISKPEHVKQVASWGADGIIVGSAMVKLLGEAQS 300

Query: 301 PEEGLKALENFTKSLKSALS 321
           PEEGLKALENFTK+LKSALS
Sbjct: 301 PEEGLKALENFTKTLKSALS 312

[Close]

BLAST of Clc07G00570 vs. NCBI nr
Match: XP_008449352.1 (PREDICTED: tryptophan synthase alpha chain-like isoform X1 [Cucumis melo] >TYK30117.1 tryptophan synthase alpha chain-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 562.0 bits (1447), Expect = 3.3e-156
Identity = 296/320 (92.50%), Postives = 302/320 (94.38%), Query Frame = 0


Query: 1   MDIAFNSSRLLPFNKIPTTLIFPPHPCKISVFQSKRFVPMAALTASPAVGLSETFSKLKQ 60
           MD   NSSRL  FNKIPTTLIFPPHPCKISVFQSKR VPMA+LTAS AVGLSETFSKLK+
Sbjct: 1   MDTVLNSSRLFQFNKIPTTLIFPPHPCKISVFQSKRVVPMASLTASSAVGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLST GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMMTIKDAGVRGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFM+TIKDAGV+GLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMLTIKDAGVQGLVVPDVPLE 180

Query: 181 ETEILRKEAVKHNIELVNSFAHMAVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGAR 240
           ETEILRKEAVKHNIEL        VLLTTPTTP+DRMKAIVEASEGFVYLVSSVGVTGAR
Sbjct: 181 ETEILRKEAVKHNIEL--------VLLTTPTTPRDRMKAIVEASEGFVYLVSSVGVTGAR 240

Query: 241 ASVSEKVQILLEEIKEVTEKPVAVGFGISKPEHVKQVASWGADGIIVGSAMVKLLGEAQS 300
           ASVS KVQ LLEEIKEVTEKPVAVGFGISKPEHVKQV+SWGADGIIVGSAMVKLLGEAQS
Sbjct: 241 ASVSNKVQTLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIVGSAMVKLLGEAQS 300

Query: 301 PEEGLKALENFTKSLKSALS 321
           PEEGLKALENFTKSLKSALS
Sbjct: 301 PEEGLKALENFTKSLKSALS 312

[Close]

BLAST of Clc07G00570 vs. NCBI nr
Match: XP_004145375.1 (tryptophan synthase alpha chain isoform X1 [Cucumis sativus])

HSP 1 Score: 559.7 bits (1441), Expect = 1.6e-155
Identity = 295/319 (92.48%), Postives = 301/319 (94.36%), Query Frame = 0


Query: 1   MDIAFNSSRLLPFNKIPTTLIFPPHPCKISVFQSKRFVPMAALTASPAVGLSETFSKLKQ 60
           MDI  NSSRL  FNKIPTTLIFPPHPCKISVFQSKR VPMA+LTAS AVGLSETFSKLK+
Sbjct: 1   MDIVLNSSRLFQFNKIPTTLIFPPHPCKISVFQSKRVVPMASLTASSAVGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLST GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMMTIKDAGVRGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFM+TIKDAGVRGLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMLTIKDAGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKHNIELVNSFAHMAVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGAR 240
           ETEILRKEAVKH+IEL        VLLTTPTTP+DRMKAIVEASEGFVYLVSSVGVTGAR
Sbjct: 181 ETEILRKEAVKHSIEL--------VLLTTPTTPRDRMKAIVEASEGFVYLVSSVGVTGAR 240

Query: 241 ASVSEKVQILLEEIKEVTEKPVAVGFGISKPEHVKQVASWGADGIIVGSAMVKLLGEAQS 300
           ASVS KVQ LLEEIKEVTEKPVAVGFGISKPEHVKQV+SWGADGIIVGSAMVKLLGEAQS
Sbjct: 241 ASVSNKVQTLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIVGSAMVKLLGEAQS 300

Query: 301 PEEGLKALENFTKSLKSAL 320
           PEEGLKALENFTKSL SAL
Sbjct: 301 PEEGLKALENFTKSLTSAL 311

[Close]

BLAST of Clc07G00570 vs. NCBI nr
Match: KAA0057418.1 (tryptophan synthase alpha chain-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 557.4 bits (1435), Expect = 8.2e-155
Identity = 296/321 (92.21%), Postives = 302/321 (94.08%), Query Frame = 0


Query: 1   MDIAFNSSRLLPFNKIPTTLIFPPHPCKISVFQSKRFVPMAALTASPAVGLSETFSKLKQ 60
           MD   NSSRL  FNKIPTTLIFPPHPCKISVFQSKR VPMA+LTAS AVGLSETFSKLK+
Sbjct: 1   MDTVLNSSRLFQFNKIPTTLIFPPHPCKISVFQSKRVVPMASLTASSAVGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLST GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKE-VIPELSCPIALFSYYNPILKRGIGNFMMTIKDAGVRGLVVPDVPL 180
           RGTNFSAIISMLKE VIPELSCPIALFSYYNPILKRGIGNFM+TIKDAGV+GLVVPDVPL
Sbjct: 121 RGTNFSAIISMLKEVVIPELSCPIALFSYYNPILKRGIGNFMLTIKDAGVQGLVVPDVPL 180

Query: 181 EETEILRKEAVKHNIELVNSFAHMAVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGA 240
           EETEILRKEAVKHNIEL        VLLTTPTTP+DRMKAIVEASEGFVYLVSSVGVTGA
Sbjct: 181 EETEILRKEAVKHNIEL--------VLLTTPTTPRDRMKAIVEASEGFVYLVSSVGVTGA 240

Query: 241 RASVSEKVQILLEEIKEVTEKPVAVGFGISKPEHVKQVASWGADGIIVGSAMVKLLGEAQ 300
           RASVS KVQ LLEEIKEVTEKPVAVGFGISKPEHVKQV+SWGADGIIVGSAMVKLLGEAQ
Sbjct: 241 RASVSNKVQTLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIVGSAMVKLLGEAQ 300

Query: 301 SPEEGLKALENFTKSLKSALS 321
           SPEEGLKALENFTKSLKSALS
Sbjct: 301 SPEEGLKALENFTKSLKSALS 313

[Close]

BLAST of Clc07G00570 vs. NCBI nr
Match: XP_022145935.1 (tryptophan synthase alpha chain-like isoform X1 [Momordica charantia] >XP_022145936.1 tryptophan synthase alpha chain-like isoform X1 [Momordica charantia])

HSP 1 Score: 553.1 bits (1424), Expect = 1.5e-153
Identity = 291/321 (90.65%), Postives = 303/321 (94.39%), Query Frame = 0


Query: 1   MDIAFNSSRLLPFNKIPTT-LIFPPHPCKISVFQSKRFVPMAALTASPAVGLSETFSKLK 60
           MDIAFNSSRLL FNKIPTT LIFPPH CKISVFQ+KRF PMAA+TAS AVGLSETF+KLK
Sbjct: 1   MDIAFNSSRLLRFNKIPTTPLIFPPHTCKISVFQTKRFAPMAAITASRAVGLSETFNKLK 60

Query: 61  QQGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPVIQAAATRSL 120
           +QGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPVIQAAATRSL
Sbjct: 61  EQGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPVIQAAATRSL 120

Query: 121 ARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMMTIKDAGVRGLVVPDVPL 180
           ARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGI NFMMTIKDAGV+GLV+PDVPL
Sbjct: 121 ARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIENFMMTIKDAGVQGLVIPDVPL 180

Query: 181 EETEILRKEAVKHNIELVNSFAHMAVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGA 240
           EETEILRKEAVKH+IEL        VLLTTPTTPKDRMKAIVEASEGF+YLVSSVGVTGA
Sbjct: 181 EETEILRKEAVKHDIEL--------VLLTTPTTPKDRMKAIVEASEGFIYLVSSVGVTGA 240

Query: 241 RASVSEKVQILLEEIKEVTEKPVAVGFGISKPEHVKQVASWGADGIIVGSAMVKLLGEAQ 300
           RASVS +VQ LLEEIKEVTEKPVAVGFGISKPEHVKQVA WGADG+IVGSA+VKLLGEA+
Sbjct: 241 RASVSNRVQTLLEEIKEVTEKPVAVGFGISKPEHVKQVAGWGADGVIVGSAIVKLLGEAK 300

Query: 301 SPEEGLKALENFTKSLKSALS 321
           SPEEGLK LENFTKSLKSALS
Sbjct: 301 SPEEGLKELENFTKSLKSALS 313

[Close]

BLAST of Clc07G00570 vs. ExPASy Swiss-Prot
Match: Q42529 (Tryptophan synthase alpha chain, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TSA1 PE=1 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 3.2e-117
Identity = 216/286 (75.52%), Postives = 252/286 (88.11%), Query Frame = 0


Query: 35  KRFVPMAAL-TASPAVGLSETFSKLKQQGKVAFIPYITAGDPDLSTTAEALKVLSTYGSD 94
           KRF PMA+L T+SP +GL++TF++LK+QGKVAFIPYITAGDPDLSTTAEALKVL   GSD
Sbjct: 34  KRFTPMASLSTSSPTLGLADTFTQLKKQGKVAFIPYITAGDPDLSTTAEALKVLDACGSD 93

Query: 95  IIELGVPYSDPLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPIL 154
           IIELGVPYSDPLADGPVIQAAATRSL RGTN  +I+ ML +V+P++SCPI+LF+YYNPIL
Sbjct: 94  IIELGVPYSDPLADGPVIQAAATRSLERGTNLDSILEMLDKVVPQISCPISLFTYYNPIL 153

Query: 155 KRGIGNFMMTIKDAGVRGLVVPDVPLEETEILRKEAVKHNIELVNSFAHMAVLLTTPTTP 214
           KRG+G FM +I+  GV+GLVVPDVPLEETE+LRKEA+ ++IEL        VLLTTPTTP
Sbjct: 154 KRGLGKFMSSIRAVGVQGLVVPDVPLEETEMLRKEALNNDIEL--------VLLTTPTTP 213

Query: 215 KDRMKAIVEASEGFVYLVSSVGVTGARASVSEKVQILLEEIKEVTEKPVAVGFGISKPEH 274
            +RMK IV+ASEGF+YLVSS+GVTGAR+SVS KVQ LL++IKE T+KPVAVGFGISKPEH
Sbjct: 214 TERMKLIVDASEGFIYLVSSIGVTGARSSVSGKVQSLLKDIKEATDKPVAVGFGISKPEH 273

Query: 275 VKQVASWGADGIIVGSAMVKLLGEAQSPEEGLKALENFTKSLKSAL 320
           VKQ+A WGADG+IVGSAMVKLLG+A+SP EGLK LE  TKSLKSAL
Sbjct: 274 VKQIAGWGADGVIVGSAMVKLLGDAKSPTEGLKELEKLTKSLKSAL 311

[Close]

BLAST of Clc07G00570 vs. ExPASy Swiss-Prot
Match: O22765 (Tryptophan synthase alpha chain OS=Arabidopsis thaliana OX=3702 GN=TRPA1 PE=1 SV=2)

HSP 1 Score: 419.9 bits (1078), Expect = 2.7e-116
Identity = 217/276 (78.62%), Postives = 241/276 (87.32%), Query Frame = 0


Query: 44  TASPAVGLSETFSKLKQQGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSD 103
           T S  VGLSETF++LK QGKVA IPYITAGDPDLSTTA+ALKVL + GSDIIELGVPYSD
Sbjct: 6   TPSSTVGLSETFARLKSQGKVALIPYITAGDPDLSTTAKALKVLDSCGSDIIELGVPYSD 65

Query: 104 PLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMMT 163
           PLADGP IQAAA RSL +GTNF++IISMLKEVIP+LSCPIALF+YYNPIL+RG+ N+M  
Sbjct: 66  PLADGPAIQAAARRSLLKGTNFNSIISMLKEVIPQLSCPIALFTYYNPILRRGVENYMTV 125

Query: 164 IKDAGVRGLVVPDVPLEETEILRKEAVKHNIELVNSFAHMAVLLTTPTTPKDRMKAIVEA 223
           IK+AGV GL+VPDVPLEETE LR EA KH IEL        VLLTTPTTPK+RM AIVEA
Sbjct: 126 IKNAGVHGLLVPDVPLEETETLRNEARKHQIEL--------VLLTTPTTPKERMNAIVEA 185

Query: 224 SEGFVYLVSSVGVTGARASVSEKVQILLEEIKEVTEKPVAVGFGISKPEHVKQVASWGAD 283
           SEGF+YLVSSVGVTG R SV+EKVQ LL++IKE T KPVAVGFGISKPEHVKQVA WGAD
Sbjct: 186 SEGFIYLVSSVGVTGTRESVNEKVQSLLQQIKEATSKPVAVGFGISKPEHVKQVAEWGAD 245

Query: 284 GIIVGSAMVKLLGEAQSPEEGLKALENFTKSLKSAL 320
           G+IVGSAMVK+LGE++SPE+GLK LE FTKSLKSAL
Sbjct: 246 GVIVGSAMVKILGESESPEQGLKELEFFTKSLKSAL 273

[Close]

BLAST of Clc07G00570 vs. ExPASy Swiss-Prot
Match: P42390 (Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays OX=4577 GN=BX1 PE=1 SV=2)

HSP 1 Score: 315.8 bits (808), Expect = 5.4e-85
Identity = 158/269 (58.74%), Postives = 203/269 (75.46%), Query Frame = 0


Query: 51  LSETFSKLKQQGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPV 110
           +S+T + L  +GK AFIPYITAGDPDL+TTAEAL++L   G+D+IELGVP SDP  DGP+
Sbjct: 90  VSDTMAALMAKGKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPI 149

Query: 111 IQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMMTIKDAGVR 170
           IQA+  R+LA GT   A++ ML+EV PELSCP+ L SYY PI+ R +      +K+AGV 
Sbjct: 150 IQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYYKPIMSRSLAE----MKEAGVH 209

Query: 171 GLVVPDVPLEETEILRKEAVKHNIELVNSFAHMAVLLTTPTTPKDRMKAIVEASEGFVYL 230
           GL+VPD+P      L  EA  +N+EL        VLLTTP  P+DRMK I +ASEGFVYL
Sbjct: 210 GLIVPDLPYVAAHSLWSEAKNNNLEL--------VLLTTPAIPEDRMKEITKASEGFVYL 269

Query: 231 VSSVGVTGARASVSEKVQILLEEIKEVTEKPVAVGFGISKPEHVKQVASWGADGIIVGSA 290
           VS  GVTG RA+V+ +V+ L++E+K+VT KPVAVGFGISKPEHVKQ+A WGADG+I+GSA
Sbjct: 270 VSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGSA 329

Query: 291 MVKLLGEAQSPEEGLKALENFTKSLKSAL 320
           MV+ LGEA SP++GL+ LE + + +K+AL
Sbjct: 330 MVRQLGEAASPKQGLRRLEEYARGMKNAL 346

[Close]

BLAST of Clc07G00570 vs. ExPASy Swiss-Prot
Match: Q10W95 (Tryptophan synthase alpha chain OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=trpA PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.9e-77
Identity = 151/273 (55.31%), Postives = 199/273 (72.89%), Query Frame = 0


Query: 49  VGLSETFSKLK-QQGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLAD 108
           + +S+ F  L+    + A IP+ITAGDPDL TTA+AL+VL   G+++IELGVPYSDPLAD
Sbjct: 2   ISVSDCFESLRNNSSQCALIPFITAGDPDLETTAKALEVLDRSGANMIELGVPYSDPLAD 61

Query: 109 GPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMMTIKDA 168
           GPVIQAAATRSL RGT   +++ +++ V P+L  PI LF+YYNPIL RG+ NF+  I D 
Sbjct: 62  GPVIQAAATRSLNRGTTLESVLEVVQTVSPKLRSPIILFTYYNPILYRGVENFLKKIYDV 121

Query: 169 GVRGLVVPDVPLEETEILRKEAVKHNIELVNSFAHMAVLLTTPTTPKDRMKAIVEASEGF 228
           G RGLVVPD+PLEE +IL + A    IEL         LL  PT+PK+R+KAI   S+GF
Sbjct: 122 GARGLVVPDLPLEEADILLEPAKDIGIEL--------TLLVAPTSPKERIKAIAHQSQGF 181

Query: 229 VYLVSSVGVTGARASVSEKVQILLEEIKEVTEKPVAVGFGISKPEHVKQVASWGADGIIV 288
           +YLVS  GVTG RA +  +V+ LL +++EVT+KP+ VGFGIS+PE   QV  WG+D +IV
Sbjct: 182 IYLVSVTGVTGMRAQMQTRVEDLLAQMREVTDKPIGVGFGISQPEQALQVKKWGSDAVIV 241

Query: 289 GSAMVKLLGEAQSPEEGLKALENFTKSLKSALS 321
           GSA+VK L E  SP+EGLKA+  F ++LK+A++
Sbjct: 242 GSAVVKRLAEG-SPDEGLKAIGEFCQNLKAAIN 265

[Close]

BLAST of Clc07G00570 vs. ExPASy Swiss-Prot
Match: B7JUK2 (Tryptophan synthase alpha chain OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=trpA PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.4e-77
Identity = 149/269 (55.39%), Postives = 193/269 (71.75%), Query Frame = 0


Query: 51  LSETFSKLKQQGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPV 110
           +S+ F  L+ + + A IP+ITAGDPDL TTA+AL++L   G+D+IELGVPYSDPLADGPV
Sbjct: 4   VSDCFQSLRDRRQCALIPFITAGDPDLETTAKALRLLDASGADLIELGVPYSDPLADGPV 63

Query: 111 IQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMMTIKDAGVR 170
           IQAAATR+L RG     ++ ++KEV PE+  PI LF+YYNPI  RG+  F+  +K AGV+
Sbjct: 64  IQAAATRALGRGVKLEDVLGVVKEVSPEIKAPIILFTYYNPIFYRGVEAFLQQVKAAGVQ 123

Query: 171 GLVVPDVPLEETEILRKEAVKHNIELVNSFAHMAVLLTTPTTPKDRMKAIVEASEGFVYL 230
           GLVVPD+PLEE E L K A  H + +         LL  PT+P +R++AI   S+GF+YL
Sbjct: 124 GLVVPDLPLEEAESLLKPA--HEVGIA------VTLLVAPTSPIERIEAIARQSQGFIYL 183

Query: 231 VSSVGVTGARASVSEKVQILLEEIKEVTEKPVAVGFGISKPEHVKQVASWGADGIIVGSA 290
           VS  GVTG R+ V+ +V+ LL  ++  T+KP+ VGFGISKPEH  QV +WGAD +IVGSA
Sbjct: 184 VSVTGVTGMRSQVTSRVKELLTSLRSATDKPIGVGFGISKPEHALQVKNWGADAVIVGSA 243

Query: 291 MVKLLGEAQSPEEGLKALENFTKSLKSAL 320
           MVK L E  +PEEGLKA+  F + LK AL
Sbjct: 244 MVKRLAEG-TPEEGLKAIGAFCQDLKQAL 263

[Close]

BLAST of Clc07G00570 vs. ExPASy TrEMBL
Match: A0A5D3E1Z9 (Tryptophan synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00990 PE=3 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.6e-156
Identity = 296/320 (92.50%), Postives = 302/320 (94.38%), Query Frame = 0


Query: 1   MDIAFNSSRLLPFNKIPTTLIFPPHPCKISVFQSKRFVPMAALTASPAVGLSETFSKLKQ 60
           MD   NSSRL  FNKIPTTLIFPPHPCKISVFQSKR VPMA+LTAS AVGLSETFSKLK+
Sbjct: 1   MDTVLNSSRLFQFNKIPTTLIFPPHPCKISVFQSKRVVPMASLTASSAVGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLST GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMMTIKDAGVRGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFM+TIKDAGV+GLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMLTIKDAGVQGLVVPDVPLE 180

Query: 181 ETEILRKEAVKHNIELVNSFAHMAVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGAR 240
           ETEILRKEAVKHNIEL        VLLTTPTTP+DRMKAIVEASEGFVYLVSSVGVTGAR
Sbjct: 181 ETEILRKEAVKHNIEL--------VLLTTPTTPRDRMKAIVEASEGFVYLVSSVGVTGAR 240

Query: 241 ASVSEKVQILLEEIKEVTEKPVAVGFGISKPEHVKQVASWGADGIIVGSAMVKLLGEAQS 300
           ASVS KVQ LLEEIKEVTEKPVAVGFGISKPEHVKQV+SWGADGIIVGSAMVKLLGEAQS
Sbjct: 241 ASVSNKVQTLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIVGSAMVKLLGEAQS 300

Query: 301 PEEGLKALENFTKSLKSALS 321
           PEEGLKALENFTKSLKSALS
Sbjct: 301 PEEGLKALENFTKSLKSALS 312

[Close]

BLAST of Clc07G00570 vs. ExPASy TrEMBL
Match: A0A1S3BMG6 (Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103491257 PE=3 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.6e-156
Identity = 296/320 (92.50%), Postives = 302/320 (94.38%), Query Frame = 0


Query: 1   MDIAFNSSRLLPFNKIPTTLIFPPHPCKISVFQSKRFVPMAALTASPAVGLSETFSKLKQ 60
           MD   NSSRL  FNKIPTTLIFPPHPCKISVFQSKR VPMA+LTAS AVGLSETFSKLK+
Sbjct: 1   MDTVLNSSRLFQFNKIPTTLIFPPHPCKISVFQSKRVVPMASLTASSAVGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLST GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMMTIKDAGVRGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFM+TIKDAGV+GLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMLTIKDAGVQGLVVPDVPLE 180

Query: 181 ETEILRKEAVKHNIELVNSFAHMAVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGAR 240
           ETEILRKEAVKHNIEL        VLLTTPTTP+DRMKAIVEASEGFVYLVSSVGVTGAR
Sbjct: 181 ETEILRKEAVKHNIEL--------VLLTTPTTPRDRMKAIVEASEGFVYLVSSVGVTGAR 240

Query: 241 ASVSEKVQILLEEIKEVTEKPVAVGFGISKPEHVKQVASWGADGIIVGSAMVKLLGEAQS 300
           ASVS KVQ LLEEIKEVTEKPVAVGFGISKPEHVKQV+SWGADGIIVGSAMVKLLGEAQS
Sbjct: 241 ASVSNKVQTLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIVGSAMVKLLGEAQS 300

Query: 301 PEEGLKALENFTKSLKSALS 321
           PEEGLKALENFTKSLKSALS
Sbjct: 301 PEEGLKALENFTKSLKSALS 312

[Close]

BLAST of Clc07G00570 vs. ExPASy TrEMBL
Match: A0A0A0LKV4 (Tryptophan synthase OS=Cucumis sativus OX=3659 GN=Csa_2G225330 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 8.0e-156
Identity = 295/319 (92.48%), Postives = 301/319 (94.36%), Query Frame = 0


Query: 1   MDIAFNSSRLLPFNKIPTTLIFPPHPCKISVFQSKRFVPMAALTASPAVGLSETFSKLKQ 60
           MDI  NSSRL  FNKIPTTLIFPPHPCKISVFQSKR VPMA+LTAS AVGLSETFSKLK+
Sbjct: 1   MDIVLNSSRLFQFNKIPTTLIFPPHPCKISVFQSKRVVPMASLTASSAVGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLST GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMMTIKDAGVRGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFM+TIKDAGVRGLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMLTIKDAGVRGLVVPDVPLE 180

Query: 181 ETEILRKEAVKHNIELVNSFAHMAVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGAR 240
           ETEILRKEAVKH+IEL        VLLTTPTTP+DRMKAIVEASEGFVYLVSSVGVTGAR
Sbjct: 181 ETEILRKEAVKHSIEL--------VLLTTPTTPRDRMKAIVEASEGFVYLVSSVGVTGAR 240

Query: 241 ASVSEKVQILLEEIKEVTEKPVAVGFGISKPEHVKQVASWGADGIIVGSAMVKLLGEAQS 300
           ASVS KVQ LLEEIKEVTEKPVAVGFGISKPEHVKQV+SWGADGIIVGSAMVKLLGEAQS
Sbjct: 241 ASVSNKVQTLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIVGSAMVKLLGEAQS 300

Query: 301 PEEGLKALENFTKSLKSAL 320
           PEEGLKALENFTKSL SAL
Sbjct: 301 PEEGLKALENFTKSLTSAL 311

[Close]

BLAST of Clc07G00570 vs. ExPASy TrEMBL
Match: A0A5A7UQL8 (Tryptophan synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G002940 PE=3 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 4.0e-155
Identity = 296/321 (92.21%), Postives = 302/321 (94.08%), Query Frame = 0


Query: 1   MDIAFNSSRLLPFNKIPTTLIFPPHPCKISVFQSKRFVPMAALTASPAVGLSETFSKLKQ 60
           MD   NSSRL  FNKIPTTLIFPPHPCKISVFQSKR VPMA+LTAS AVGLSETFSKLK+
Sbjct: 1   MDTVLNSSRLFQFNKIPTTLIFPPHPCKISVFQSKRVVPMASLTASSAVGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLST GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKE-VIPELSCPIALFSYYNPILKRGIGNFMMTIKDAGVRGLVVPDVPL 180
           RGTNFSAIISMLKE VIPELSCPIALFSYYNPILKRGIGNFM+TIKDAGV+GLVVPDVPL
Sbjct: 121 RGTNFSAIISMLKEVVIPELSCPIALFSYYNPILKRGIGNFMLTIKDAGVQGLVVPDVPL 180

Query: 181 EETEILRKEAVKHNIELVNSFAHMAVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGA 240
           EETEILRKEAVKHNIEL        VLLTTPTTP+DRMKAIVEASEGFVYLVSSVGVTGA
Sbjct: 181 EETEILRKEAVKHNIEL--------VLLTTPTTPRDRMKAIVEASEGFVYLVSSVGVTGA 240

Query: 241 RASVSEKVQILLEEIKEVTEKPVAVGFGISKPEHVKQVASWGADGIIVGSAMVKLLGEAQ 300
           RASVS KVQ LLEEIKEVTEKPVAVGFGISKPEHVKQV+SWGADGIIVGSAMVKLLGEAQ
Sbjct: 241 RASVSNKVQTLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIVGSAMVKLLGEAQ 300

Query: 301 SPEEGLKALENFTKSLKSALS 321
           SPEEGLKALENFTKSLKSALS
Sbjct: 301 SPEEGLKALENFTKSLKSALS 313

[Close]

BLAST of Clc07G00570 vs. ExPASy TrEMBL
Match: A0A6J1CVV7 (Tryptophan synthase OS=Momordica charantia OX=3673 GN=LOC111015281 PE=3 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 7.5e-154
Identity = 291/321 (90.65%), Postives = 303/321 (94.39%), Query Frame = 0


Query: 1   MDIAFNSSRLLPFNKIPTT-LIFPPHPCKISVFQSKRFVPMAALTASPAVGLSETFSKLK 60
           MDIAFNSSRLL FNKIPTT LIFPPH CKISVFQ+KRF PMAA+TAS AVGLSETF+KLK
Sbjct: 1   MDIAFNSSRLLRFNKIPTTPLIFPPHTCKISVFQTKRFAPMAAITASRAVGLSETFNKLK 60

Query: 61  QQGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPVIQAAATRSL 120
           +QGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPVIQAAATRSL
Sbjct: 61  EQGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPVIQAAATRSL 120

Query: 121 ARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMMTIKDAGVRGLVVPDVPL 180
           ARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGI NFMMTIKDAGV+GLV+PDVPL
Sbjct: 121 ARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIENFMMTIKDAGVQGLVIPDVPL 180

Query: 181 EETEILRKEAVKHNIELVNSFAHMAVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGA 240
           EETEILRKEAVKH+IEL        VLLTTPTTPKDRMKAIVEASEGF+YLVSSVGVTGA
Sbjct: 181 EETEILRKEAVKHDIEL--------VLLTTPTTPKDRMKAIVEASEGFIYLVSSVGVTGA 240

Query: 241 RASVSEKVQILLEEIKEVTEKPVAVGFGISKPEHVKQVASWGADGIIVGSAMVKLLGEAQ 300
           RASVS +VQ LLEEIKEVTEKPVAVGFGISKPEHVKQVA WGADG+IVGSA+VKLLGEA+
Sbjct: 241 RASVSNRVQTLLEEIKEVTEKPVAVGFGISKPEHVKQVAGWGADGVIVGSAIVKLLGEAK 300

Query: 301 SPEEGLKALENFTKSLKSALS 321
           SPEEGLK LENFTKSLKSALS
Sbjct: 301 SPEEGLKELENFTKSLKSALS 313

[Close]

BLAST of Clc07G00570 vs. TAIR 10
Match: AT3G54640.1 (tryptophan synthase alpha chain )

HSP 1 Score: 422.9 bits (1086), Expect = 2.2e-118
Identity = 216/286 (75.52%), Postives = 252/286 (88.11%), Query Frame = 0


Query: 35  KRFVPMAAL-TASPAVGLSETFSKLKQQGKVAFIPYITAGDPDLSTTAEALKVLSTYGSD 94
           KRF PMA+L T+SP +GL++TF++LK+QGKVAFIPYITAGDPDLSTTAEALKVL   GSD
Sbjct: 34  KRFTPMASLSTSSPTLGLADTFTQLKKQGKVAFIPYITAGDPDLSTTAEALKVLDACGSD 93

Query: 95  IIELGVPYSDPLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPIL 154
           IIELGVPYSDPLADGPVIQAAATRSL RGTN  +I+ ML +V+P++SCPI+LF+YYNPIL
Sbjct: 94  IIELGVPYSDPLADGPVIQAAATRSLERGTNLDSILEMLDKVVPQISCPISLFTYYNPIL 153

Query: 155 KRGIGNFMMTIKDAGVRGLVVPDVPLEETEILRKEAVKHNIELVNSFAHMAVLLTTPTTP 214
           KRG+G FM +I+  GV+GLVVPDVPLEETE+LRKEA+ ++IEL        VLLTTPTTP
Sbjct: 154 KRGLGKFMSSIRAVGVQGLVVPDVPLEETEMLRKEALNNDIEL--------VLLTTPTTP 213

Query: 215 KDRMKAIVEASEGFVYLVSSVGVTGARASVSEKVQILLEEIKEVTEKPVAVGFGISKPEH 274
            +RMK IV+ASEGF+YLVSS+GVTGAR+SVS KVQ LL++IKE T+KPVAVGFGISKPEH
Sbjct: 214 TERMKLIVDASEGFIYLVSSIGVTGARSSVSGKVQSLLKDIKEATDKPVAVGFGISKPEH 273

Query: 275 VKQVASWGADGIIVGSAMVKLLGEAQSPEEGLKALENFTKSLKSAL 320
           VKQ+A WGADG+IVGSAMVKLLG+A+SP EGLK LE  TKSLKSAL
Sbjct: 274 VKQIAGWGADGVIVGSAMVKLLGDAKSPTEGLKELEKLTKSLKSAL 311

[Close]

BLAST of Clc07G00570 vs. TAIR 10
Match: AT4G02610.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 419.9 bits (1078), Expect = 1.9e-117
Identity = 217/276 (78.62%), Postives = 241/276 (87.32%), Query Frame = 0


Query: 44  TASPAVGLSETFSKLKQQGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSD 103
           T S  VGLSETF++LK QGKVA IPYITAGDPDLSTTA+ALKVL + GSDIIELGVPYSD
Sbjct: 6   TPSSTVGLSETFARLKSQGKVALIPYITAGDPDLSTTAKALKVLDSCGSDIIELGVPYSD 65

Query: 104 PLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMMT 163
           PLADGP IQAAA RSL +GTNF++IISMLKEVIP+LSCPIALF+YYNPIL+RG+ N+M  
Sbjct: 66  PLADGPAIQAAARRSLLKGTNFNSIISMLKEVIPQLSCPIALFTYYNPILRRGVENYMTV 125

Query: 164 IKDAGVRGLVVPDVPLEETEILRKEAVKHNIELVNSFAHMAVLLTTPTTPKDRMKAIVEA 223
           IK+AGV GL+VPDVPLEETE LR EA KH IEL        VLLTTPTTPK+RM AIVEA
Sbjct: 126 IKNAGVHGLLVPDVPLEETETLRNEARKHQIEL--------VLLTTPTTPKERMNAIVEA 185

Query: 224 SEGFVYLVSSVGVTGARASVSEKVQILLEEIKEVTEKPVAVGFGISKPEHVKQVASWGAD 283
           SEGF+YLVSSVGVTG R SV+EKVQ LL++IKE T KPVAVGFGISKPEHVKQVA WGAD
Sbjct: 186 SEGFIYLVSSVGVTGTRESVNEKVQSLLQQIKEATSKPVAVGFGISKPEHVKQVAEWGAD 245

Query: 284 GIIVGSAMVKLLGEAQSPEEGLKALENFTKSLKSAL 320
           G+IVGSAMVK+LGE++SPE+GLK LE FTKSLKSAL
Sbjct: 246 GVIVGSAMVKILGESESPEQGLKELEFFTKSLKSAL 273

The following BLAST results are available for this feature:

BLAST of Clc07G00570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888258.1	2.1e-158	93.44	tryptophan synthase alpha chain-like isoform X1 [Benincasa hispida]	[more]
XP_008449352.1	3.3e-156	92.50	PREDICTED: tryptophan synthase alpha chain-like isoform X1 [Cucumis melo] >TYK30...	[more]
XP_004145375.1	1.6e-155	92.48	tryptophan synthase alpha chain isoform X1 [Cucumis sativus]	[more]
KAA0057418.1	8.2e-155	92.21	tryptophan synthase alpha chain-like isoform X1 [Cucumis melo var. makuwa]	[more]
XP_022145935.1	1.5e-153	90.65	tryptophan synthase alpha chain-like isoform X1 [Momordica charantia] >XP_022145...	[more]

BLAST of Clc07G00570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42529	3.2e-117	75.52	Tryptophan synthase alpha chain, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
O22765	2.7e-116	78.62	Tryptophan synthase alpha chain OS=Arabidopsis thaliana OX=3702 GN=TRPA1 PE=1 SV...	[more]
P42390	5.4e-85	58.74	Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays OX=4577 GN=BX1 PE=1...	[more]
Q10W95	1.9e-77	55.31	Tryptophan synthase alpha chain OS=Trichodesmium erythraeum (strain IMS101) OX=2...	[more]
B7JUK2	2.4e-77	55.39	Tryptophan synthase alpha chain OS=Rippkaea orientalis (strain PCC 8801) OX=4143...	[more]

BLAST of Clc07G00570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E1Z9	1.6e-156	92.50	Tryptophan synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G...	[more]
A0A1S3BMG6	1.6e-156	92.50	Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103491257 PE=3 SV=1	[more]
A0A0A0LKV4	8.0e-156	92.48	Tryptophan synthase OS=Cucumis sativus OX=3659 GN=Csa_2G225330 PE=3 SV=1	[more]
A0A5A7UQL8	4.0e-155	92.21	Tryptophan synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G...	[more]
A0A6J1CVV7	7.5e-154	90.65	Tryptophan synthase OS=Momordica charantia OX=3673 GN=LOC111015281 PE=3 SV=1	[more]

BLAST of Clc07G00570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54640.1	2.2e-118	75.52	tryptophan synthase alpha chain	[more]
AT4G02610.1	1.9e-117	78.62	Aldolase-type TIM barrel family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 240..260
None	No IPR available	PANTHER	PTHR43406:SF6	TRYPTOPHAN SYNTHASE ALPHA CHAIN	coord: 46..319
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 50..320 e-value: 9.1E-108 score: 361.1
IPR002028	Tryptophan synthase, alpha chain	PFAM	PF00290	Trp_syntA	coord: 55..318 e-value: 3.7E-91 score: 304.6
IPR002028	Tryptophan synthase, alpha chain	TIGRFAM	TIGR00262	TIGR00262	coord: 55..316 e-value: 3.3E-90 score: 299.4
IPR002028	Tryptophan synthase, alpha chain	PANTHER	PTHR43406	TRYPTOPHAN SYNTHASE, ALPHA CHAIN	coord: 46..319
IPR002028	Tryptophan synthase, alpha chain	HAMAP	MF_00131	Trp_synth_alpha	coord: 61..318 score: 36.111122
IPR002028	Tryptophan synthase, alpha chain	CDD	cd04724	Tryptophan_synthase_alpha	coord: 65..316 e-value: 3.39966E-113 score: 325.971
IPR018204	Tryptophan synthase, alpha chain, active site	PROSITE	PS00167	TRP_SYNTHASE_ALPHA	coord: 95..108
IPR011060	Ribulose-phosphate binding barrel	SUPERFAMILY	51366	Ribulose-phoshate binding barrel	coord: 51..300

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc07G00570.2	Clc07G00570.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006568	tryptophan metabolic process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004834	tryptophan synthase activity
molecular_function	GO:0003824	catalytic activity