Clc06G18870 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc06G18870
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	Protein-methionine-S-oxide reductase
Location	ClcChr06: 29156774 .. 29157768 (-)
RNA-Seq Expression	Clc06G18870
Synteny	Clc06G18870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGTAACACCCTACTCGTATTACCATGGTCTTCTGGGCAGGATATGTAATACGTCCAACGTCACACTAGACGTCCGACTTTCACTTCCCCAGCTCCAGGGGCACCTTCTCACCCCTTACTCACCTCTTCAATATCTATAAAAAAGCCCATAGCTCATGCCCTTTTTGGTCTGATTCGATAGGGCTCTTCCAGAGTCAGAGCCCCCTTACTTAAAAGCTTAAAAGGGCTGCTGCCCTAACTGATCCACCATCCCCGTCGACGCTATGTTATCCCAAATATTTTTCTTTACTTATTTCTTTTGGAGAAGGGGATGTATAAGCATTTAACCAATATGTGTAAAGTAGATAGAAACTTCCTGATATTATTGAAGGGACATTCTCTTAGGCTGATAAATCAACGTGGGTAAGGGAGGGCATCAAATTGGTAATTGTTATTCCAACCTGCTCTCTCTCTTCTGGTCTCGCATTGATCCCACCTCCCTCAATCGCCAAGTAGGCAAAACATCCACTTTCTACAAACACTTGCTCTGGTATGATCCTGTAAACTCAAAAGGTTTCTGTTTTGTTTTTGCTTTGGTGTGACAAGGGGGCGGATGAGGGGGCACAATATCGATCGGGGATATACTACTTCAACGAGACACAAGCTCGTTTAGCTCGTGAATCCAAAGAAGCCAAGAAGTTGGAGTTAAAAGACAAAGAAGTTGTAACAGAGATTCTTCCAGCCAAGAGATTCTATAGGGCAGAAGAGTACCATCAGCAGTATCTGGAGAAAGGTGGGGGCAAAGGCCATAAACGGTCTGCTGAAAAGGGTTGCACTGATCCCATTAGATGCTATGGTTAAGGCCAAGCCAGCCAAGAATAATAAGATTGTTTGTCATTCTTACTGCTCTGCTTTTGTTGCTTCTGGCTTTGGTTGTGAGTGGGGCTTCCCTATCATATCACAAGTAAGTTGCACATACCTATAATAAAAGTTCCAGGCTGCTCTATGCTAA

mRNA sequence

ATGCAGGGAGGGCATCAAATTGGTAATTGTTATTCCAACCTGCTCTCTCTCTTCTGGTCTCGCATTGATCCCACCTCCCTCAATCGCCAAGGGGCGGATGAGGGGGCACAATATCGATCGGGGATATACTACTTCAACGAGACACAAGCTCGTTTAGCTCGTGAATCCAAAGAAGCCAAGAAGTTGGAGTTAAAAGACAAAGAAGTTGTAACAGAGATTCTTCCAGCCAAGAGATTCTATAGGGCAGAAGAGTACCATCAGCAGTATCTGGAGAAAGGTGGGGGCAAAGGCCATAAACGGTCTGCTGAAAAGGGTTGCACTGATCCCATTAGATGCTATGGTTAAGGCCAAGCCAGCCAAGAATAATAAGATTGTTTGTCATTCTTACTGCTCTGCTTTTGTTGCTTCTGGCTTTGGTTGTGAGTGGGGCTTCCCTATCATATCACAAGTAAGTTGCACATACCTATAATAAAAGTTCCAGGCTGCTCTATGCTAA

Coding sequence (CDS)

ATGCAGGGAGGGCATCAAATTGGTAATTGTTATTCCAACCTGCTCTCTCTCTTCTGGTCTCGCATTGATCCCACCTCCCTCAATCGCCAAGGGGCGGATGAGGGGGCACAATATCGATCGGGGATATACTACTTCAACGAGACACAAGCTCGTTTAGCTCGTGAATCCAAAGAAGCCAAGAAGTTGGAGTTAAAAGACAAAGAAGTTGTAACAGAGATTCTTCCAGCCAAGAGATTCTATAGGGCAGAAGAGTACCATCAGCAGTATCTGGAGAAAGGTGGGGGCAAAGGCCATAAACGGTCTGCTGAAAAGGGTTGCACTGATCCCATTAGATGCTATGGTTAA

Protein sequence

MQGGHQIGNCYSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVVTEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG

Homology

[Close]

BLAST of Clc06G18870 vs. NCBI nr
Match: XP_008464484.1 (PREDICTED: peptide methionine sulfoxide reductase-like [Cucumis melo] >TYJ98483.1 peptide methionine sulfoxide reductase-like [Cucumis melo var. makuwa])

HSP 1 Score: 204.1 bits (518), Expect = 6.2e-49
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           Y+NLLSLFWSRIDPTSLNRQG D+GAQYRSGIYYFNETQARLA ESKEAKKLE KDKEVV
Sbjct: 91  YNNLLSLFWSRIDPTSLNRQGNDKGAQYRSGIYYFNETQARLAHESKEAKKLEFKDKEVV 150

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPAKRFYRAEEYHQQYLEKGGGKGHK+SAEKGCTDPIRCYG
Sbjct: 151 TEILPAKRFYRAEEYHQQYLEKGGGKGHKQSAEKGCTDPIRCYG 194

[Close]

BLAST of Clc06G18870 vs. NCBI nr
Match: KAA0057799.1 (peptide methionine sulfoxide reductase-like [Cucumis melo var. makuwa])

HSP 1 Score: 204.1 bits (518), Expect = 6.2e-49
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           Y+NLLSLFWSRIDPTSLNRQG D+GAQYRSGIYYFNETQARLA ESKEAKKLE KDKEVV
Sbjct: 91  YNNLLSLFWSRIDPTSLNRQGNDKGAQYRSGIYYFNETQARLAHESKEAKKLEFKDKEVV 150

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPAKRFYRAEEYHQQYLEKGGGKGHK+SAEKGCTDPIRCYG
Sbjct: 151 TEILPAKRFYRAEEYHQQYLEKGGGKGHKQSAEKGCTDPIRCYG 194

[Close]

BLAST of Clc06G18870 vs. NCBI nr
Match: XP_004138072.1 (peptide methionine sulfoxide reductase [Cucumis sativus] >KGN63512.1 hypothetical protein Csa_013830 [Cucumis sativus])

HSP 1 Score: 203.0 bits (515), Expect = 1.4e-48
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           Y+NLLSLFWSRIDPTSLNRQG D+GAQYRSGIYYFNETQARLA ESKEAKKLELKDKEVV
Sbjct: 91  YTNLLSLFWSRIDPTSLNRQGNDKGAQYRSGIYYFNETQARLAHESKEAKKLELKDKEVV 150

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPAKRFYRAEEYHQQYLEKGGGKGHK+SA KGCTDPIRCYG
Sbjct: 151 TEILPAKRFYRAEEYHQQYLEKGGGKGHKQSAGKGCTDPIRCYG 194

[Close]

BLAST of Clc06G18870 vs. NCBI nr
Match: XP_022135167.1 (peptide methionine sulfoxide reductase-like [Momordica charantia])

HSP 1 Score: 192.2 bits (487), Expect = 2.5e-45
Identity = 92/104 (88.46%), Postives = 98/104 (94.23%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           Y++LLSLFWSRIDPTSLNRQG D GAQYRSGIYYFNETQARLA +SKEA KLE+KD E+V
Sbjct: 109 YTHLLSLFWSRIDPTSLNRQGQDVGAQYRSGIYYFNETQARLAHQSKEANKLEIKDTEIV 168

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPAKRFYRAEEYHQQYLEKGGGKG K+SAEKGCTDPIRCYG
Sbjct: 169 TEILPAKRFYRAEEYHQQYLEKGGGKGLKQSAEKGCTDPIRCYG 212

[Close]

BLAST of Clc06G18870 vs. NCBI nr
Match: KAF3438647.1 (hypothetical protein FNV43_RR21411 [Rhamnella rubrinervis])

HSP 1 Score: 191.0 bits (484), Expect = 5.5e-45
Identity = 92/104 (88.46%), Postives = 98/104 (94.23%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           Y+NLLS+FW R DPTSLNRQG D GAQYRSGIYYFNETQARLA ESKEAK+LELKDK+VV
Sbjct: 91  YTNLLSVFWGRHDPTSLNRQGGDVGAQYRSGIYYFNETQARLAHESKEAKQLELKDKKVV 150

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPAKRFYRAEEYHQQYLEKGGG+G K+SAEKGCTDPIRCYG
Sbjct: 151 TEILPAKRFYRAEEYHQQYLEKGGGQGLKQSAEKGCTDPIRCYG 194

[Close]

BLAST of Clc06G18870 vs. ExPASy Swiss-Prot
Match: P54153 (Peptide methionine sulfoxide reductase (Fragment) OS=Solanum lycopersicum OX=4081 GN=E4 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 9.1e-43
Identity = 83/104 (79.81%), Postives = 92/104 (88.46%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           YSNLLSLFWSR DPT+LNRQG D G QYRSGIYY+N+ QA+LARES EAK+ E  DK++V
Sbjct: 93  YSNLLSLFWSRHDPTTLNRQGNDVGKQYRSGIYYYNDAQAQLARESLEAKQKEFMDKKIV 152

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPAKRFYRAEEYHQQYLEKGGG+G K+SA KGC DPIRCYG
Sbjct: 153 TEILPAKRFYRAEEYHQQYLEKGGGRGCKQSAAKGCNDPIRCYG 196

[Close]

BLAST of Clc06G18870 vs. ExPASy Swiss-Prot
Match: P54152 (Peptide methionine sulfoxide reductase OS=Fragaria ananassa OX=3747 PE=2 SV=2)

HSP 1 Score: 172.2 bits (435), Expect = 3.5e-42
Identity = 81/104 (77.88%), Postives = 92/104 (88.46%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           YS+LLS+FWSR DPT+LNRQG D G QYRSGIYY+NE Q  LA++SKEAK+ E KDK VV
Sbjct: 88  YSDLLSVFWSRHDPTTLNRQGGDVGTQYRSGIYYYNEEQDCLAKKSKEAKQKEFKDKRVV 147

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPAKRFYRAEEYHQQYLEKGGG G+K+SA+KGC DPI+CYG
Sbjct: 148 TEILPAKRFYRAEEYHQQYLEKGGGNGNKQSAQKGCNDPIKCYG 191

[Close]

BLAST of Clc06G18870 vs. ExPASy Swiss-Prot
Match: Q9FKF7 (Peptide methionine sulfoxide reductase A1 OS=Arabidopsis thaliana OX=3702 GN=MSRA1 PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 5.9e-34
Identity = 70/104 (67.31%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           Y +LL LFWS+ DPT+LNRQG D G QYRSGIY++N  Q +LARES E  + ++ D++VV
Sbjct: 100 YQSLLDLFWSKHDPTTLNRQGNDVGTQYRSGIYFYNPEQEKLARESLERHQQQV-DRKVV 159

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPAK+FYRAEE+HQQYL KGG  G K+S EKGC DPIRCYG
Sbjct: 160 TEILPAKKFYRAEEHHQQYLSKGGRFGLKQSTEKGCNDPIRCYG 202

[Close]

BLAST of Clc06G18870 vs. ExPASy Swiss-Prot
Match: P54150 (Peptide methionine sulfoxide reductase A4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MSR4 PE=1 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 1.1e-32
Identity = 66/104 (63.46%), Postives = 83/104 (79.81%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           + +LL +FW+R DPT+LNRQG D G QYRSGIYY+ + Q R+ARE+ E K+ ++ +K +V
Sbjct: 156 FESLLDVFWNRHDPTTLNRQGGDVGTQYRSGIYYYTDEQERIAREAVE-KQQKILNKRIV 215

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPA +FYRAE YHQQYL KGG  G ++SAEKGC DPIRCYG
Sbjct: 216 TEILPATKFYRAENYHQQYLAKGGRMGLRQSAEKGCKDPIRCYG 258

[Close]

BLAST of Clc06G18870 vs. ExPASy Swiss-Prot
Match: Q336R9 (Peptide methionine sulfoxide reductase A4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MSRA4 PE=2 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 1.9e-32
Identity = 68/104 (65.38%), Postives = 82/104 (78.85%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           + +LL +FW+R DPT+ NRQG D G QYRSGIYY+   Q + ARES E K+ +L ++ +V
Sbjct: 161 FDDLLDVFWARHDPTTPNRQGNDVGTQYRSGIYYYTPEQEKAARESLE-KQQKLLNRTIV 220

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPAKRFYRAEEYHQQYL KGG  G ++SAEKGC DPIRCYG
Sbjct: 221 TEILPAKRFYRAEEYHQQYLAKGGRFGFRQSAEKGCNDPIRCYG 263

[Close]

BLAST of Clc06G18870 vs. ExPASy TrEMBL
Match: A0A5D3BGV1 (Protein-methionine-S-oxide reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00850 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.0e-49
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           Y+NLLSLFWSRIDPTSLNRQG D+GAQYRSGIYYFNETQARLA ESKEAKKLE KDKEVV
Sbjct: 91  YNNLLSLFWSRIDPTSLNRQGNDKGAQYRSGIYYFNETQARLAHESKEAKKLEFKDKEVV 150

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPAKRFYRAEEYHQQYLEKGGGKGHK+SAEKGCTDPIRCYG
Sbjct: 151 TEILPAKRFYRAEEYHQQYLEKGGGKGHKQSAEKGCTDPIRCYG 194

[Close]

BLAST of Clc06G18870 vs. ExPASy TrEMBL
Match: A0A5A7UW54 (Protein-methionine-S-oxide reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00820 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.0e-49
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           Y+NLLSLFWSRIDPTSLNRQG D+GAQYRSGIYYFNETQARLA ESKEAKKLE KDKEVV
Sbjct: 91  YNNLLSLFWSRIDPTSLNRQGNDKGAQYRSGIYYFNETQARLAHESKEAKKLEFKDKEVV 150

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPAKRFYRAEEYHQQYLEKGGGKGHK+SAEKGCTDPIRCYG
Sbjct: 151 TEILPAKRFYRAEEYHQQYLEKGGGKGHKQSAEKGCTDPIRCYG 194

[Close]

BLAST of Clc06G18870 vs. ExPASy TrEMBL
Match: A0A1S3CLK2 (Protein-methionine-S-oxide reductase OS=Cucumis melo OX=3656 GN=LOC103502352 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.0e-49
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           Y+NLLSLFWSRIDPTSLNRQG D+GAQYRSGIYYFNETQARLA ESKEAKKLE KDKEVV
Sbjct: 91  YNNLLSLFWSRIDPTSLNRQGNDKGAQYRSGIYYFNETQARLAHESKEAKKLEFKDKEVV 150

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPAKRFYRAEEYHQQYLEKGGGKGHK+SAEKGCTDPIRCYG
Sbjct: 151 TEILPAKRFYRAEEYHQQYLEKGGGKGHKQSAEKGCTDPIRCYG 194

[Close]

BLAST of Clc06G18870 vs. ExPASy TrEMBL
Match: A0A0A0LRY2 (Protein-methionine-S-oxide reductase OS=Cucumis sativus OX=3659 GN=Csa_1G002810 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.7e-49
Identity = 98/104 (94.23%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           Y+NLLSLFWSRIDPTSLNRQG D+GAQYRSGIYYFNETQARLA ESKEAKKLELKDKEVV
Sbjct: 91  YTNLLSLFWSRIDPTSLNRQGNDKGAQYRSGIYYFNETQARLAHESKEAKKLELKDKEVV 150

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPAKRFYRAEEYHQQYLEKGGGKGHK+SA KGCTDPIRCYG
Sbjct: 151 TEILPAKRFYRAEEYHQQYLEKGGGKGHKQSAGKGCTDPIRCYG 194

[Close]

BLAST of Clc06G18870 vs. ExPASy TrEMBL
Match: A0A6J1C1X2 (Protein-methionine-S-oxide reductase OS=Momordica charantia OX=3673 GN=LOC111007202 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.2e-45
Identity = 92/104 (88.46%), Postives = 98/104 (94.23%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           Y++LLSLFWSRIDPTSLNRQG D GAQYRSGIYYFNETQARLA +SKEA KLE+KD E+V
Sbjct: 109 YTHLLSLFWSRIDPTSLNRQGQDVGAQYRSGIYYFNETQARLAHQSKEANKLEIKDTEIV 168

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPAKRFYRAEEYHQQYLEKGGGKG K+SAEKGCTDPIRCYG
Sbjct: 169 TEILPAKRFYRAEEYHQQYLEKGGGKGLKQSAEKGCTDPIRCYG 212

[Close]

BLAST of Clc06G18870 vs. TAIR 10
Match: AT5G61640.1 (peptidemethionine sulfoxide reductase 1 )

HSP 1 Score: 144.8 bits (364), Expect = 4.2e-35
Identity = 70/104 (67.31%), Postives = 84/104 (80.77%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           Y +LL LFWS+ DPT+LNRQG D G QYRSGIY++N  Q +LARES E  + ++ D++VV
Sbjct: 100 YQSLLDLFWSKHDPTTLNRQGNDVGTQYRSGIYFYNPEQEKLARESLERHQQQV-DRKVV 159

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPAK+FYRAEE+HQQYL KGG  G K+S EKGC DPIRCYG
Sbjct: 160 TEILPAKKFYRAEEHHQQYLSKGGRFGLKQSTEKGCNDPIRCYG 202

[Close]

BLAST of Clc06G18870 vs. TAIR 10
Match: AT4G25130.1 (peptide met sulfoxide reductase 4 )

HSP 1 Score: 140.6 bits (353), Expect = 7.9e-34
Identity = 66/104 (63.46%), Postives = 83/104 (79.81%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           + +LL +FW+R DPT+LNRQG D G QYRSGIYY+ + Q R+ARE+ E K+ ++ +K +V
Sbjct: 156 FESLLDVFWNRHDPTTLNRQGGDVGTQYRSGIYYYTDEQERIAREAVE-KQQKILNKRIV 215

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPA +FYRAE YHQQYL KGG  G ++SAEKGC DPIRCYG
Sbjct: 216 TEILPATKFYRAENYHQQYLAKGGRMGLRQSAEKGCKDPIRCYG 258

[Close]

BLAST of Clc06G18870 vs. TAIR 10
Match: AT5G07470.1 (peptidemethionine sulfoxide reductase 3 )

HSP 1 Score: 138.3 bits (347), Expect = 3.9e-33
Identity = 66/111 (59.46%), Postives = 85/111 (76.58%), Query Frame = 0


Query: 5   HQIGNC-YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLE 64
           + + +C Y +LL LFWSR DPT+LNRQG D G QYRSGIY++   Q +LARES E  + +
Sbjct: 93  YDLNDCTYESLLDLFWSRHDPTTLNRQGNDVGTQYRSGIYFYTPEQEKLARESLERHQQQ 152

Query: 65  LKDKEVVTEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           + +++++TEILPAK+FYRAEE+HQQYL KGG  G  +S  KGC DPIRCYG
Sbjct: 153 M-ERKIMTEILPAKKFYRAEEHHQQYLSKGGRFGQGQSTAKGCNDPIRCYG 202

[Close]

BLAST of Clc06G18870 vs. TAIR 10
Match: AT5G07460.1 (peptidemethionine sulfoxide reductase 2 )

HSP 1 Score: 135.6 bits (340), Expect = 2.5e-32
Identity = 67/104 (64.42%), Postives = 81/104 (77.88%), Query Frame = 0


Query: 11  YSNLLSLFWSRIDPTSLNRQGADEGAQYRSGIYYFNETQARLARESKEAKKLELKDKEVV 70
           Y  LL LFWSR +PT+LNRQG   GAQYRSGIY++   Q +LARES E ++ +L+DK +V
Sbjct: 116 YETLLDLFWSRHNPTTLNRQGELLGAQYRSGIYFYTPEQEKLARESLEKEQKKLEDK-IV 175

Query: 71  TEILPAKRFYRAEEYHQQYLEKGGGKGHKRSAEKGCTDPIRCYG 115
           TEILPAK+FY+AEEYHQQYL KGG  G+ +S  K C DPIRCYG
Sbjct: 176 TEILPAKKFYKAEEYHQQYLVKGGMHGNAQSPAKSCKDPIRCYG 218

The following BLAST results are available for this feature:

BLAST of Clc06G18870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464484.1	6.2e-49	94.23	PREDICTED: peptide methionine sulfoxide reductase-like [Cucumis melo] >TYJ98483....	[more]
KAA0057799.1	6.2e-49	94.23	peptide methionine sulfoxide reductase-like [Cucumis melo var. makuwa]	[more]
XP_004138072.1	1.4e-48	94.23	peptide methionine sulfoxide reductase [Cucumis sativus] >KGN63512.1 hypothetica...	[more]
XP_022135167.1	2.5e-45	88.46	peptide methionine sulfoxide reductase-like [Momordica charantia]	[more]
KAF3438647.1	5.5e-45	88.46	hypothetical protein FNV43_RR21411 [Rhamnella rubrinervis]	[more]

BLAST of Clc06G18870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P54153	9.1e-43	79.81	Peptide methionine sulfoxide reductase (Fragment) OS=Solanum lycopersicum OX=408...	[more]
P54152	3.5e-42	77.88	Peptide methionine sulfoxide reductase OS=Fragaria ananassa OX=3747 PE=2 SV=2	[more]
Q9FKF7	5.9e-34	67.31	Peptide methionine sulfoxide reductase A1 OS=Arabidopsis thaliana OX=3702 GN=MSR...	[more]
P54150	1.1e-32	63.46	Peptide methionine sulfoxide reductase A4, chloroplastic OS=Arabidopsis thaliana...	[more]
Q336R9	1.9e-32	65.38	Peptide methionine sulfoxide reductase A4, chloroplastic OS=Oryza sativa subsp. ...	[more]

BLAST of Clc06G18870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BGV1	3.0e-49	94.23	Protein-methionine-S-oxide reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7UW54	3.0e-49	94.23	Protein-methionine-S-oxide reductase OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CLK2	3.0e-49	94.23	Protein-methionine-S-oxide reductase OS=Cucumis melo OX=3656 GN=LOC103502352 PE=...	[more]
A0A0A0LRY2	6.7e-49	94.23	Protein-methionine-S-oxide reductase OS=Cucumis sativus OX=3659 GN=Csa_1G002810 ...	[more]
A0A6J1C1X2	1.2e-45	88.46	Protein-methionine-S-oxide reductase OS=Momordica charantia OX=3673 GN=LOC111007...	[more]

BLAST of Clc06G18870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G61640.1	4.2e-35	67.31	peptidemethionine sulfoxide reductase 1	[more]
AT4G25130.1	7.9e-34	63.46	peptide met sulfoxide reductase 4	[more]
AT5G07470.1	3.9e-33	59.46	peptidemethionine sulfoxide reductase 3	[more]
AT5G07460.1	2.5e-32	64.42	peptidemethionine sulfoxide reductase 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 45..65
None	No IPR available	PANTHER	PTHR42799:SF18	PEPTIDE METHIONINE SULFOXIDE REDUCTASE FAMILY PROTEIN	coord: 10..114
None	No IPR available	PANTHER	PTHR42799	MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE	coord: 10..114
IPR002569	Peptide methionine sulphoxide reductase MsrA	PFAM	PF01625	PMSR	coord: 11..93 e-value: 2.3E-28 score: 99.3
IPR036509	Peptide methionine sulphoxide reductase MsrA superfamily	GENE3D	3.30.1060.10	Peptide methionine sulphoxide reductase MsrA	coord: 8..114 e-value: 1.4E-36 score: 127.8
IPR036509	Peptide methionine sulphoxide reductase MsrA superfamily	SUPERFAMILY	55068	Peptide methionine sulfoxide reductase	coord: 11..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc06G18870.2	Clc06G18870.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0036456	L-methionine-(S)-S-oxide reductase activity
molecular_function	GO:0008113	peptide-methionine (S)-S-oxide reductase activity