Clc06G11510 (gene) Watermelon (cordophanus) v2

Overview
NameClc06G11510
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionTy3/gypsy retrotransposon protein
LocationClcChr06: 21689607 .. 21693091 (+)
RNA-Seq ExpressionClc06G11510
SyntenyClc06G11510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGGGCACCATGTGAGTGGAAGGGTTTTAAGAGGGGTTAGGGGAATGTTGAGAGGTTGGAATTGTGAGGTGATCAAGCCTAGCTTTGAGGGAGAGCATTTCCAGCCCTCTTTATGGTACTATCTTTCTATTTCTTTTTTGTCTTTCCTGAGCTTGTATTTCATCCAAGCAAGTATATTAAATAAAGTCTCTGAAGTATTGAATTCTGCAGGGAATTGCCATTTGACGTTATTCTGATTATCAATTGTTAGAATCCTAACAATTTTGGTATCTGAGCCATTCGACACCCTAGGAAGAACAAGAAGTGAAACCAAGAGGGAGATAGAAGAGAAAATTGAAAATAATGTCCAAGGAATTTTTGAATTGAAAGAATGGATGATCGAGATGAGCAAAACCATAGACCTCGTGGCAGCAAATGTTCAGAACCTGATGAACTTACGAGAGGAGGGTTCAGTCTTACAATCGAGGACGCTGCCAACGTCAAAGGAAAAAGAGACCGAAGAAGGAGAAAGTTCTCATAGAAGATCGGGAAATGAAGTTGACCGAAGCAAATACAAGAGGTTGGAGATGCCGATTCTTTCAGGTGAGAATCCGGATTCATGGGTTTATCGAGCGGAACATTACTTTGAAATTCATGAATTAGATGATTTGGAGAAAATCAAAGTGGCAATCATTGCTTTCGCACCCGATGGGGTTGACTGGTTTCGATGGACACACAATCGACGACCGATTCTAACATGGGAAGCTTTGAAGGAGAGACTATTCAGTCTATTTCGGCCAGCACAAGAAGGTATGCTTCTTTCTCAATTGCTACGAATCCAGCAAGAAGGAACTTATGAAGAGTACCTTAAGAAATTTGGGACGTACTCGGCTCCTCTACCGAACACGGTCCCCGCGGTTAGTGATTGGAATGTGGCCTTGAAGTTAGCAGCGGAGGAAATGGGCTCGGATCGTGGGTTGGCCCAACAAGGTGGGTTAGCTAAAAAAACCAAAAGAAAAATACTGCAGAGTCAACCCTAAAGAGCGTGGTAATCCCCGACAAAGGAGAATTAGGAAAAAAAAGAGGTCCCATGTTGCTAATTATCTAATGCTGAGGCGAAGGTGAAGCGAGACAAAGGCTTATGTTTCCGTTGTGACGAGAGGTATTTCAGAGGCCATAAATGCAAGACGGAGGAGAGAGAACTTAATTTGTTGATCGTCCATGACGAAAAGGAAGAGGATTTATGAAGTCGAGCTATTGAACGAAGAAGTACTGGAGATGAAGGTTTTGGAGGTAGACAATAATGTGGAAGTAGCATTGCGATCGATTCTGGGATTTTCAGCGACGAGAACTATGAAATTAAAAGGGTTAGCCGCCGGAAAAGAAGTTGTGGTGATGGTGAACTGCAGTGCGACCCATAACTTCATATATTAGAGGCTAGTGGACGAACTTCAATTGCCACTGTTGGAGACTTCTCATTACGAGGTAGGGAATGGTGTGGCTCTCAAGGGAAAAAGGATTTGCAAATCAGTGATCGTGGTTTTACTGAATGTAACTATTAAGGAAAATTTTCCACCTCTGGAATTGAGCCGAGTCGACGTGATCTTGGGTATGGTCTGGTTATGTAACATGGGCTATATGGAGGTGAATTGGCCAACATTGACTATGATGTTTCTGTCCGGAGAACAGAGAATTACGCTGAAAGGAGATCCTTCCTTAATCACGGAAAAGGTAACCTTGAAAACATTTTTTTTTTTTTGTGTTAAAAGGAAACATGACTTTTTCATTGATAAAATGAAAAGAGCCAATAGCTCAAAGTACAAAGGAAACAAAAGGAAAACAAGCAAACAAACAAAATAGAAACTGAGGAAAGACAATTACACAATTGAAAAAACTAAAACATTGAAGAGAAGAAAATACAATCGACTAAAGAGCTAAAGAGCCAAAAAACGAGCCGAATAAAACATTTTAACTTATTTAAAAAGTTTAAAATGATTAGTCATTAATCTAAATATTTTATTTTTGAATTTTTTGTTTTTATATTTTTCCATTAATTTTTATCGACATTTTCATCACCATCGACATTTTGAATCTTGAAAAGATTGTGAGTATATGCAGGGGAAGTACCTGTTCCTCTAGACTCAACTCCTGAACGTATCTCCTCGACAGTCATAACACTATCTTCAAGTGCATTATTTTTCACCTATTGGGAAATAATTTAAGAATAAGAATCCTTCAAAGCACTTCTGATTTTTTATCAAAATACTTGTGGAATTTTGACAATCTCTTTTAGTAGGATAATAGCAATTTTTACACTTCCAAACCATTCCAAACTCACTCACAACTATAATAATTAATAAGTATTTGGTTAAATTACAAATTTAGTTCTTTCTTAACTTTAAGGTTTGCCTATTTAGTCCTTGAATTTTCAAAACTACAAATTTAGTCCTTAAAGTTCTAAATTTTCACAAATCTACTAGAACACAAGACAAAAAAGTGAAAGTTTAAAATTCCATTAGCATAAAATCACATCTAACAGATCAAGTAATTTTGAAAATTTTCAAATTTGGAAGGATTTATTGAACACAAAGTTGAACTGAAAGTCTAGAGAATTTGACACTTTTGAAAGTTGATGGACCAAATAGACATATATCAAAATTTTGAGACTAAACTTATAATTTAACTAGAGTATTTAGTTCTTACAAAGTGCAAAATGATGTCAGCCCAATCTTGAATCCGGTGCCATAAAATAAGGCATTTCCTATGTCCTTTATCCAGCCATTCTGCACGACCTATAGGACAATTAAAATGAACAAATATCAATTTTTTCCCTATGAAAATGAATGAGAACTGTAAACAGATAGAATTTTAGAACTAAACTAGCAGGCCCTAACCATCTGAAACTAAAGCTAAGAGAAAAGCTTCTCTAGCTTCGTGACTGAGAGATCCTGTAGCATCACAACCACACTGTAAAATACATCAAACAACTGCAACAGCAATACACAGTTTCGTGACCGAGTCTAAAACACCAAGAGGTTTTAACAGCCAATTAGGACCAAACAAGGCCATGAAATTTACTTTCAATCACAGAGTTTGAAAATAGAGGAAAGTCCTCTTCGAGTCCAATGACAAATATCTTTTGCATTCGGCAGTAATCAAGGATAAGTTCCTTCCAAAGTTGAATTTGCTTCTCACGGGTGTCCCTCACTGGTTGCAAACTGAGATGACATGCAATAAAAAGGTTATATATGCAACTCAAGGCAGAAGACAAACTTGAGAAAAGTGAAAGAATCAACGTTATCCAACAAGAATTGCAGGATTGCAGTTAAGGTACAACTTTACAACTATCACATTCATTATATGAGGCTGGTGGGGAAAGTATAGGGGATCTAGTATATGCAGTTTCCGTTTACTGTTGTGTAACTACTAGTTGAGCAATGAAGTGTCAGTTTTCTTTGCTCAGGATCATCAAAACCAAGATATCAACATCATCAGAAAATGA

mRNA sequence

ATGGAGGGGCACCATGTGAGTGGAAGGGTTTTAAGAGGGGTTAGGGGAATGTTGAGAGGTTGGAATTGTGAGGTGATCAAGCCTAGCTTTGAGGGAGAGCATTTCCAGCCCTCTTTATGGTACTATCTTTCTATTTCTTTTTTGTCTTTCCTGAGCTTGTATTTCATCCAAGCAAGAAGAACAAGAAGTGAAACCAAGAGGGAGATAGAAGAGAAAATTGAAAATAATGTCCAAGGAATTTTTGAATTGAAAGAATGGATGATCGAGATGAGCAAAACCATAGACCTCGTGGCAGCAAATGTTCAGAACCTGATGAACTTACGAGAGGAGGGTTCAGTCTTACAATCGAGGACGCTGCCAACGTCAAAGGAAAAAGAGACCGAAGAAGGAGAAAGTTCTCATAGAAGATCGGGAAATGAAGTTGACCGAAGCAAATACAAGAGGTTGGAGATGCCGATTCTTTCAGGTGAGAATCCGGATTCATGGGTTTATCGAGCGGAACATTACTTTGAAATTCATGAATTAGATGATTTGGAGAAAATCAAAGTGGCAATCATTGCTTTCGCACCCGATGGGGTTGACTGGTTTCGATGGACACACAATCGACGACCGATTCTAACATGGGAAGCTTTGAAGGAGAGACTATTCAGTCTATTTCGGCCAGCACAAGAAGGTATGCTTCTTTCTCAATTGCTACGAATCCAGCAAGAAGGAACTTATGAAGAGTACCTTAAGAAATTTGGGACGTACTCGGCTCCTCTACCGAACACGGTCCCCGCGGTTAGTGATTGGAATGTGGCCTTGAAGTTAGCAGCGGAGGAAATGGGCTCGGATCGTGGGTTGGCCCAACAAGGTGGAGTCAACCCTAAAGAGCGTGGTAATCCCCGACAAAGGAGAATTAGGAAAAAAAAGAGGTCCCATGTTGCTAATTATCTAATGCTGAGGCGAAGGAAGAGGATTTATGAAGTCGAGCTATTGAACGAAGAAGTACTGGAGATGAAGGTTTTGGAGGTAGACAATAATGTGGAAGTAGCATTGCGATCGATTCTGGGATTTTCAGCGACGAGAACTATGAAATTAAAAGGGTTAGCCGCCGGAAAAGAAGTTGTGGTGATGAGGCTAGTGGACGAACTTCAATTGCCACTGTTGGAGACTTCTCATTACGAGGTAGGGAATGGTGTGGCTCTCAAGGGAAAAAGGATTTGCAAATCAGTGATCGTGGTTTTACTGAATGTAACTATTAAGGAAAATTTTCCACCTCTGGAATTGAGCCGAGTCGACGTGATCTTGGGTATGGTCTGGTTATGTAACATGGGCTATATGGAGGTGAATTGGCCAACATTGACTATGATGTTTCTGTCCGGAGAACAGAGAATTACGCTGAAAGGAGATCCTTCCTTAATCACGGAAAAGAGGAAAGTCCTCTTCGAGTCCAATGACAAATATCTTTTGCATTCGGCAGTAATCAAGGATAAGTTCCTTCCAAAGTTGAATTTGCTTCTCACGGGTGTCCCTCACTGGCAGAAGACAAACTTGAGAAAAGTGAAAGAATCAACGTTATCCAACAAGAATTGCAGGATTGCAGTTAAGGCTGGTGGGGAAAGTATAGGGGATCTAGTATATGCAGTTTCCGTTTACTGTTGTGATCATCAAAACCAAGATATCAACATCATCAGAAAATGA

Coding sequence (CDS)

ATGGAGGGGCACCATGTGAGTGGAAGGGTTTTAAGAGGGGTTAGGGGAATGTTGAGAGGTTGGAATTGTGAGGTGATCAAGCCTAGCTTTGAGGGAGAGCATTTCCAGCCCTCTTTATGGTACTATCTTTCTATTTCTTTTTTGTCTTTCCTGAGCTTGTATTTCATCCAAGCAAGAAGAACAAGAAGTGAAACCAAGAGGGAGATAGAAGAGAAAATTGAAAATAATGTCCAAGGAATTTTTGAATTGAAAGAATGGATGATCGAGATGAGCAAAACCATAGACCTCGTGGCAGCAAATGTTCAGAACCTGATGAACTTACGAGAGGAGGGTTCAGTCTTACAATCGAGGACGCTGCCAACGTCAAAGGAAAAAGAGACCGAAGAAGGAGAAAGTTCTCATAGAAGATCGGGAAATGAAGTTGACCGAAGCAAATACAAGAGGTTGGAGATGCCGATTCTTTCAGGTGAGAATCCGGATTCATGGGTTTATCGAGCGGAACATTACTTTGAAATTCATGAATTAGATGATTTGGAGAAAATCAAAGTGGCAATCATTGCTTTCGCACCCGATGGGGTTGACTGGTTTCGATGGACACACAATCGACGACCGATTCTAACATGGGAAGCTTTGAAGGAGAGACTATTCAGTCTATTTCGGCCAGCACAAGAAGGTATGCTTCTTTCTCAATTGCTACGAATCCAGCAAGAAGGAACTTATGAAGAGTACCTTAAGAAATTTGGGACGTACTCGGCTCCTCTACCGAACACGGTCCCCGCGGTTAGTGATTGGAATGTGGCCTTGAAGTTAGCAGCGGAGGAAATGGGCTCGGATCGTGGGTTGGCCCAACAAGGTGGAGTCAACCCTAAAGAGCGTGGTAATCCCCGACAAAGGAGAATTAGGAAAAAAAAGAGGTCCCATGTTGCTAATTATCTAATGCTGAGGCGAAGGAAGAGGATTTATGAAGTCGAGCTATTGAACGAAGAAGTACTGGAGATGAAGGTTTTGGAGGTAGACAATAATGTGGAAGTAGCATTGCGATCGATTCTGGGATTTTCAGCGACGAGAACTATGAAATTAAAAGGGTTAGCCGCCGGAAAAGAAGTTGTGGTGATGAGGCTAGTGGACGAACTTCAATTGCCACTGTTGGAGACTTCTCATTACGAGGTAGGGAATGGTGTGGCTCTCAAGGGAAAAAGGATTTGCAAATCAGTGATCGTGGTTTTACTGAATGTAACTATTAAGGAAAATTTTCCACCTCTGGAATTGAGCCGAGTCGACGTGATCTTGGGTATGGTCTGGTTATGTAACATGGGCTATATGGAGGTGAATTGGCCAACATTGACTATGATGTTTCTGTCCGGAGAACAGAGAATTACGCTGAAAGGAGATCCTTCCTTAATCACGGAAAAGAGGAAAGTCCTCTTCGAGTCCAATGACAAATATCTTTTGCATTCGGCAGTAATCAAGGATAAGTTCCTTCCAAAGTTGAATTTGCTTCTCACGGGTGTCCCTCACTGGCAGAAGACAAACTTGAGAAAAGTGAAAGAATCAACGTTATCCAACAAGAATTGCAGGATTGCAGTTAAGGCTGGTGGGGAAAGTATAGGGGATCTAGTATATGCAGTTTCCGTTTACTGTTGTGATCATCAAAACCAAGATATCAACATCATCAGAAAATGA

Protein sequence

MEGHHVSGRVLRGVRGMLRGWNCEVIKPSFEGEHFQPSLWYYLSISFLSFLSLYFIQARRTRSETKREIEEKIENNVQGIFELKEWMIEMSKTIDLVAANVQNLMNLREEGSVLQSRTLPTSKEKETEEGESSHRRSGNEVDRSKYKRLEMPILSGENPDSWVYRAEHYFEIHELDDLEKIKVAIIAFAPDGVDWFRWTHNRRPILTWEALKERLFSLFRPAQEGMLLSQLLRIQQEGTYEEYLKKFGTYSAPLPNTVPAVSDWNVALKLAAEEMGSDRGLAQQGGVNPKERGNPRQRRIRKKKRSHVANYLMLRRRKRIYEVELLNEEVLEMKVLEVDNNVEVALRSILGFSATRTMKLKGLAAGKEVVVMRLVDELQLPLLETSHYEVGNGVALKGKRICKSVIVVLLNVTIKENFPPLELSRVDVILGMVWLCNMGYMEVNWPTLTMMFLSGEQRITLKGDPSLITEKRKVLFESNDKYLLHSAVIKDKFLPKLNLLLTGVPHWQKTNLRKVKESTLSNKNCRIAVKAGGESIGDLVYAVSVYCCDHQNQDINIIRK
Homology
BLAST of Clc06G11510 vs. NCBI nr
Match: KAA0061366.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK14721.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 256.9 bits (655), Expect = 4.0e-64
Identity = 173/508 (34.06%), Postives = 261/508 (51.38%), Query Frame = 0

Query: 66  KREIEEKIENNVQGIFELKEWMIEMSKTIDLVAANVQ--NLMNLREEGSVLQSRTLPTSK 125
           +R++EEK++   + I  LKE M+EM K ++ +A  ++  +    +EE       ++   K
Sbjct: 3   QRQMEEKVDGTEKEILSLKEMMLEMKKAVERLADEMKESHSYKKKEESGTTSDGSVMKLK 62

Query: 126 EKETEEGESSHRRSGNEVDRSKYKRLEMPILSGENPDSWVYRAEHYFEIHELDDLEKIKV 185
            K  +E E     +G   DRSKYK+LEMP+  GENP+SWVYRAEH+FEI+ L + EK+KV
Sbjct: 63  GK-LDETELITETNGAVTDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLPEAEKVKV 122

Query: 186 AIIAFAPDGVDWFRWTHNRRPILTWEALKERLFSLFRPAQEGMLLSQLLRIQQEGTYEEY 245
           A+++F  D VDW+RW+HNR+ + +WE LK R+F  FR + +  L ++L+RIQQ+G+Y +Y
Sbjct: 123 AVVSFGQDEVDWYRWSHNRKKVESWEDLKSRMFEFFRDSGQKSLGARLIRIQQDGSYNDY 182

Query: 246 LKKFGTYSAPLP-----------------------------------NTVPAVSDWNVAL 305
           +KKF TYS+PLP                                        V+D N+AL
Sbjct: 183 VKKFVTYSSPLPYMAESVLVDASVTGLEPSLQAEVISRHPQTLEEYMREAQLVNDRNLAL 242

Query: 306 KLAAEEMGS---DRGLAQQGGVNPK-ERGNPRQRRIRKKK-------------------- 365
           KL   E+G    D G + +G    + E+  PR+   + K+                    
Sbjct: 243 KLTKMELGMTEWDEGGSSKGRKTEEIEKAMPRKTDFQMKQIPIKGHFKKGEPPVKRLSDA 302

Query: 366 --RSHVANYLMLR-------------RRKRIYEVELLNEE---------------VLEMK 425
             R+ +   L  R             + KR     ++NEE                +E+K
Sbjct: 303 EFRARLDRGLCFRCNDKYSPGHRCKTKEKRELMFFIMNEEDETEEVNSKDEMAERTVELK 362

Query: 426 VLEVDNNVEVALRSILGFSATRTMKLKGLAAGKEVVVM------------RLVDELQLPL 469
            LE+  + E+ L+++   S+  TMKLKG    KE+VV+             L  ELQ+ L
Sbjct: 363 NLELTEDTEIELKTMTNLSSKGTMKLKGWVRQKEIVVLINSGATHNFIHQALAKELQMGL 422

BLAST of Clc06G11510 vs. NCBI nr
Match: KAA0056659.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 250.4 bits (638), Expect = 3.7e-62
Identity = 165/508 (32.48%), Postives = 263/508 (51.77%), Query Frame = 0

Query: 66  KREIEEKIENNVQGIFELKEWMIEMSKTIDLVAANVQNLMNLREEGSVLQSRTLPTSKEK 125
           +R++EE++E   + +  LKE M+EM K++D +A  +++    ++E S    R++   K K
Sbjct: 3   QRQMEERLEGTEKEVLSLKEMMLEMKKSMDRLADELRDQSYKKKEESGTSDRSIMKMKGK 62

Query: 126 ETEEGESSHRRSGNEVDRSKYKRLEMPILSGENPDSWVYRAEHYFEIHELDDLEKIKVAI 185
             EE + +     +++DRSKYK+LEMP+  GENP+SWVYRAEH+FEI+ L + EK+KVA+
Sbjct: 63  -MEETDVTGEIHTHQIDRSKYKKLEMPMFQGENPESWVYRAEHFFEINNLPEAEKVKVAV 122

Query: 186 IAFAPDGVDWFRWTHNRRPILTWEALKERLFSLFRPAQEGMLLSQLLRIQQEGTYEEYLK 245
           ++F  D VDW+RW+HNRR + +WE LK R+F  FR   +  L ++L+RIQQEG+Y +Y+K
Sbjct: 123 VSFGQDEVDWYRWSHNRRKVESWEDLKTRMFEFFRDTGQKSLGARLIRIQQEGSYSDYVK 182

Query: 246 KFGTYSAPLPNTV-------------PA----------------------VSDWNVALKL 305
           KF  YSAPLP+               PA                      V+D N+ALKL
Sbjct: 183 KFVNYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPQTLEECMMAAQLVNDRNLALKL 242

Query: 306 AAEEMG-----------------SDRGLAQQGGVNPK----------ERGNPRQRRIRKK 365
           A  EMG                 +D+G+ ++     K          ++G P  +R+   
Sbjct: 243 AQAEMGIMEPKRSETAGNKVPWNNDKGIMRKNEFQMKQITIPLKGSYQKGEPPVKRLSDA 302

Query: 366 K-RSHVANYLMLR-------------RRKRIYEVELLNEE---------------VLEMK 425
           + R+ +   L  R             + KR   + +LNEE                +E+ 
Sbjct: 303 EFRARLDKGLCFRCSEKYSHGHRCKIKEKRELMLFILNEEESTEEGESSKAPNTGPVEIN 362

Query: 426 VLEVDNNVEVALRSILGFSATRTMKLKGLAAGKEVVVM------------RLVDELQLPL 469
            LE      +  R+I   +   TMKL+G+  GKE++V+             L  E ++P+
Sbjct: 363 QLEGPEETMIEYRAITSLTTKGTMKLRGIVKGKEIIVLIDSGATHNFIHHELATERKIPI 422

BLAST of Clc06G11510 vs. NCBI nr
Match: KAA0061073.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 1.4e-61
Identity = 175/509 (34.38%), Postives = 261/509 (51.28%), Query Frame = 0

Query: 66  KREIEEKIENNVQGIFELKEWMIEMSKTIDLVAANV-QNLMNLREEGSVLQSRTLPTSKE 125
           +R++EE++E   + +  +KE ++EM K ++ +A  + +N    ++E S   S       +
Sbjct: 3   QRQMEERVEGTEKELLSMKEMLLEMKKAVERLADEMKENHSYKKKEESGTTSDGSVMKLK 62

Query: 126 KETEEGESSHRRSGNEVDRSKYKRLEMPILSGENPDSWVYRAEHYFEIHELDDLEKIKVA 185
            + +E E     +G   DRSKYK+LEMP+  GENP+SWVYRAEH+FEI+ L + EK+KVA
Sbjct: 63  GKMDETEPITEINGTVTDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLSESEKVKVA 122

Query: 186 IIAFAPDGVDWFRWTHNRRPILTWEALKERLFSLFRPAQEGMLLSQLLRIQQEGTYEEYL 245
           +++F  D VDW+RW+HNR+ + +WE LK R+F  FR + +  L ++L+RIQQEG+Y EY+
Sbjct: 123 VVSFGQDEVDWYRWSHNRKKVESWEDLKSRMFEFFRDSGQKSLGARLIRIQQEGSYNEYV 182

Query: 246 KKFGTYSAPLP-----------------------------------NTVPAVSDWNVALK 305
           KKF TYSAPLP                                        V+D N ALK
Sbjct: 183 KKFVTYSAPLPYMAESVLVDAFVTGLEPSLQAEVISRHPQTLEDCMREAQLVNDRNYALK 242

Query: 306 LAAEEM-------GSDRGLAQQGGVN---PK-----------------ERGNPRQRRIRK 365
           L+  E+       G    + + G V+   P+                 ++G P  +R+  
Sbjct: 243 LSKMELGMTEWEVGGSSKVKKLGDVDKPPPRKTDFQMKQITIPIKGNFKKGEPPVKRLSD 302

Query: 366 KK-RSHVANYLMLR-------------RRKRIYEVELLN---------------EEVLEM 425
            + R+ +   L  R             + KR     ++N               EE +E+
Sbjct: 303 AEFRARLDRGLCFRCNDKYSPGHRCKTKEKRELMFFIMNEEEEDEEGDSQEEVIEETVEL 362

Query: 426 KVLEVDNNVEVALRSILGFSATRTMKLKGLAAGKEVVVM------------RLVDELQLP 469
           K LE+ +   + L+++   S+  TMKLKG    KEVVV+             L  EL+L 
Sbjct: 363 KTLELTDETAIELKTMTRISSKGTMKLKGWIRQKEVVVLIDSGATHNFIHHSLAAELELG 422

BLAST of Clc06G11510 vs. NCBI nr
Match: TYK21035.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK30523.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 1.4e-61
Identity = 166/508 (32.68%), Postives = 262/508 (51.57%), Query Frame = 0

Query: 66  KREIEEKIENNVQGIFELKEWMIEMSKTIDLVAANVQNLMNLREEGSVLQSRTLPTSKEK 125
           +R++EE++E   + +  LKE M+EM K++D +A  +++    ++E S     ++   K K
Sbjct: 3   QRQMEERLEGTEKEVLSLKEMMLEMKKSMDRLADELRDQSYKKKEESGTSDGSIMKMKGK 62

Query: 126 ETEEGESSHRRSGNEVDRSKYKRLEMPILSGENPDSWVYRAEHYFEIHELDDLEKIKVAI 185
             EE + +     +++DRSKYK+LEMP+  GENP+SWVYRAEH+FEI+ L + EK+KVA+
Sbjct: 63  -MEETDVTGEIHTHQIDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLPEAEKVKVAV 122

Query: 186 IAFAPDGVDWFRWTHNRRPILTWEALKERLFSLFRPAQEGMLLSQLLRIQQEGTYEEYLK 245
           ++F  D VDW+RW+HNRR + +WE LK R+F  FR   +  L ++L+RIQQEG+Y +Y+K
Sbjct: 123 VSFGQDEVDWYRWSHNRRKVESWEDLKTRMFEFFRDTGQRSLGARLIRIQQEGSYSDYVK 182

Query: 246 KFGTYSAPLPNTV-------------PA----------------------VSDWNVALKL 305
           KF  YSAPLP+               PA                      V+D N+ALKL
Sbjct: 183 KFVNYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPQTLEDCMMAAQLVNDRNLALKL 242

Query: 306 AAEEMG-----------------SDRGLAQQGGVNPK----------ERGNPRQRRIRKK 365
           A  EMG                 +D+G+ ++     K          ++G P  +R+   
Sbjct: 243 AQAEMGIIEPKRSESAGNKVQWNNDKGMMRKNEFQMKQITIPLKGSYQKGEPPVKRLSDA 302

Query: 366 K-RSHVANYLMLR-------------RRKRIYEVELLNEE---------------VLEMK 425
           + R+ +   L  R             + KR   + +LNEE                +E+ 
Sbjct: 303 EFRARLDKGLCFRCNEKYSHGHRCKIKEKRELMLFILNEEESTEEGEGSEAPNTGPVEIN 362

Query: 426 VLEVDNNVEVALRSILGFSATRTMKLKGLAAGKEVVVM------------RLVDELQLPL 469
            LE      +  R+I   +   TMKL+G+  GKEV+V+             LV E ++P+
Sbjct: 363 QLEEPEETMIEYRAITSLTTKGTMKLRGIVKGKEVIVLIDSGATHNFIHHELVTERKIPI 422

BLAST of Clc06G11510 vs. NCBI nr
Match: KAA0059481.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 248.4 bits (633), Expect = 1.4e-61
Identity = 166/508 (32.68%), Postives = 262/508 (51.57%), Query Frame = 0

Query: 66  KREIEEKIENNVQGIFELKEWMIEMSKTIDLVAANVQNLMNLREEGSVLQSRTLPTSKEK 125
           +R++EE++E   + +  LKE M+EM K++D +A  +++    ++E S     ++   K K
Sbjct: 3   QRQMEERLEGTEKEVLSLKEMMLEMKKSMDRLADELRDQSYKKKEESGTSDGSIMKMKGK 62

Query: 126 ETEEGESSHRRSGNEVDRSKYKRLEMPILSGENPDSWVYRAEHYFEIHELDDLEKIKVAI 185
             EE + +     +++DRSKYK+LEMP+  GENP+SWVYRAEH+FEI+ L + EK+KVA+
Sbjct: 63  -MEETDVTGEIHTHQIDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLPEAEKVKVAV 122

Query: 186 IAFAPDGVDWFRWTHNRRPILTWEALKERLFSLFRPAQEGMLLSQLLRIQQEGTYEEYLK 245
           ++F  D VDW+RW+HNRR + +WE LK R+F  FR   +  L ++L+RIQQEG+Y +Y+K
Sbjct: 123 VSFGQDEVDWYRWSHNRRKVESWEDLKTRMFEFFRDTGQRSLGARLIRIQQEGSYSDYVK 182

Query: 246 KFGTYSAPLPNTV-------------PA----------------------VSDWNVALKL 305
           KF  YSAPLP+               PA                      V+D N+ALKL
Sbjct: 183 KFVNYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPQTLEDCMMAAQLVNDRNLALKL 242

Query: 306 AAEEMG-----------------SDRGLAQQGGVNPK----------ERGNPRQRRIRKK 365
           A  EMG                 +D+G+ ++     K          ++G P  +R+   
Sbjct: 243 AQAEMGIIEPKRSESAGNKVQWNNDKGMMRKNEFQMKQITIPLKGSYQKGEPPVKRLSDA 302

Query: 366 K-RSHVANYLMLR-------------RRKRIYEVELLNEE---------------VLEMK 425
           + R+ +   L  R             + KR   + +LNEE                +E+ 
Sbjct: 303 EFRARLDKGLCFRCNEKYSHGHRCKIKEKRELMLFILNEEESIEEGEGSEAPNTGPVEIN 362

Query: 426 VLEVDNNVEVALRSILGFSATRTMKLKGLAAGKEVVVM------------RLVDELQLPL 469
            LE      +  R+I   +   TMKL+G+  GKEV+V+             LV E ++P+
Sbjct: 363 QLEEPEETMIEYRAITSLTTKGTMKLRGIVKGKEVIVLIDSGATHNFIHHELVTERKIPI 422

BLAST of Clc06G11510 vs. ExPASy TrEMBL
Match: A0A5A7V4F5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold692G00530 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 1.9e-64
Identity = 173/508 (34.06%), Postives = 261/508 (51.38%), Query Frame = 0

Query: 66  KREIEEKIENNVQGIFELKEWMIEMSKTIDLVAANVQ--NLMNLREEGSVLQSRTLPTSK 125
           +R++EEK++   + I  LKE M+EM K ++ +A  ++  +    +EE       ++   K
Sbjct: 3   QRQMEEKVDGTEKEILSLKEMMLEMKKAVERLADEMKESHSYKKKEESGTTSDGSVMKLK 62

Query: 126 EKETEEGESSHRRSGNEVDRSKYKRLEMPILSGENPDSWVYRAEHYFEIHELDDLEKIKV 185
            K  +E E     +G   DRSKYK+LEMP+  GENP+SWVYRAEH+FEI+ L + EK+KV
Sbjct: 63  GK-LDETELITETNGAVTDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLPEAEKVKV 122

Query: 186 AIIAFAPDGVDWFRWTHNRRPILTWEALKERLFSLFRPAQEGMLLSQLLRIQQEGTYEEY 245
           A+++F  D VDW+RW+HNR+ + +WE LK R+F  FR + +  L ++L+RIQQ+G+Y +Y
Sbjct: 123 AVVSFGQDEVDWYRWSHNRKKVESWEDLKSRMFEFFRDSGQKSLGARLIRIQQDGSYNDY 182

Query: 246 LKKFGTYSAPLP-----------------------------------NTVPAVSDWNVAL 305
           +KKF TYS+PLP                                        V+D N+AL
Sbjct: 183 VKKFVTYSSPLPYMAESVLVDASVTGLEPSLQAEVISRHPQTLEEYMREAQLVNDRNLAL 242

Query: 306 KLAAEEMGS---DRGLAQQGGVNPK-ERGNPRQRRIRKKK-------------------- 365
           KL   E+G    D G + +G    + E+  PR+   + K+                    
Sbjct: 243 KLTKMELGMTEWDEGGSSKGRKTEEIEKAMPRKTDFQMKQIPIKGHFKKGEPPVKRLSDA 302

Query: 366 --RSHVANYLMLR-------------RRKRIYEVELLNEE---------------VLEMK 425
             R+ +   L  R             + KR     ++NEE                +E+K
Sbjct: 303 EFRARLDRGLCFRCNDKYSPGHRCKTKEKRELMFFIMNEEDETEEVNSKDEMAERTVELK 362

Query: 426 VLEVDNNVEVALRSILGFSATRTMKLKGLAAGKEVVVM------------RLVDELQLPL 469
            LE+  + E+ L+++   S+  TMKLKG    KE+VV+             L  ELQ+ L
Sbjct: 363 NLELTEDTEIELKTMTNLSSKGTMKLKGWVRQKEIVVLINSGATHNFIHQALAKELQMGL 422

BLAST of Clc06G11510 vs. ExPASy TrEMBL
Match: A0A5A7UT21 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001910 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.8e-62
Identity = 165/508 (32.48%), Postives = 263/508 (51.77%), Query Frame = 0

Query: 66  KREIEEKIENNVQGIFELKEWMIEMSKTIDLVAANVQNLMNLREEGSVLQSRTLPTSKEK 125
           +R++EE++E   + +  LKE M+EM K++D +A  +++    ++E S    R++   K K
Sbjct: 3   QRQMEERLEGTEKEVLSLKEMMLEMKKSMDRLADELRDQSYKKKEESGTSDRSIMKMKGK 62

Query: 126 ETEEGESSHRRSGNEVDRSKYKRLEMPILSGENPDSWVYRAEHYFEIHELDDLEKIKVAI 185
             EE + +     +++DRSKYK+LEMP+  GENP+SWVYRAEH+FEI+ L + EK+KVA+
Sbjct: 63  -MEETDVTGEIHTHQIDRSKYKKLEMPMFQGENPESWVYRAEHFFEINNLPEAEKVKVAV 122

Query: 186 IAFAPDGVDWFRWTHNRRPILTWEALKERLFSLFRPAQEGMLLSQLLRIQQEGTYEEYLK 245
           ++F  D VDW+RW+HNRR + +WE LK R+F  FR   +  L ++L+RIQQEG+Y +Y+K
Sbjct: 123 VSFGQDEVDWYRWSHNRRKVESWEDLKTRMFEFFRDTGQKSLGARLIRIQQEGSYSDYVK 182

Query: 246 KFGTYSAPLPNTV-------------PA----------------------VSDWNVALKL 305
           KF  YSAPLP+               PA                      V+D N+ALKL
Sbjct: 183 KFVNYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPQTLEECMMAAQLVNDRNLALKL 242

Query: 306 AAEEMG-----------------SDRGLAQQGGVNPK----------ERGNPRQRRIRKK 365
           A  EMG                 +D+G+ ++     K          ++G P  +R+   
Sbjct: 243 AQAEMGIMEPKRSETAGNKVPWNNDKGIMRKNEFQMKQITIPLKGSYQKGEPPVKRLSDA 302

Query: 366 K-RSHVANYLMLR-------------RRKRIYEVELLNEE---------------VLEMK 425
           + R+ +   L  R             + KR   + +LNEE                +E+ 
Sbjct: 303 EFRARLDKGLCFRCSEKYSHGHRCKIKEKRELMLFILNEEESTEEGESSKAPNTGPVEIN 362

Query: 426 VLEVDNNVEVALRSILGFSATRTMKLKGLAAGKEVVVM------------RLVDELQLPL 469
            LE      +  R+I   +   TMKL+G+  GKE++V+             L  E ++P+
Sbjct: 363 QLEGPEETMIEYRAITSLTTKGTMKLRGIVKGKEIIVLIDSGATHNFIHHELATERKIPI 422

BLAST of Clc06G11510 vs. ExPASy TrEMBL
Match: A0A5D3E325 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00690 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.9e-62
Identity = 166/508 (32.68%), Postives = 262/508 (51.57%), Query Frame = 0

Query: 66  KREIEEKIENNVQGIFELKEWMIEMSKTIDLVAANVQNLMNLREEGSVLQSRTLPTSKEK 125
           +R++EE++E   + +  LKE M+EM K++D +A  +++    ++E S     ++   K K
Sbjct: 3   QRQMEERLEGTEKEVLSLKEMMLEMKKSMDRLADELRDQSYKKKEESGTSDGSIMKMKGK 62

Query: 126 ETEEGESSHRRSGNEVDRSKYKRLEMPILSGENPDSWVYRAEHYFEIHELDDLEKIKVAI 185
             EE + +     +++DRSKYK+LEMP+  GENP+SWVYRAEH+FEI+ L + EK+KVA+
Sbjct: 63  -MEETDVTGEIHTHQIDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLPEAEKVKVAV 122

Query: 186 IAFAPDGVDWFRWTHNRRPILTWEALKERLFSLFRPAQEGMLLSQLLRIQQEGTYEEYLK 245
           ++F  D VDW+RW+HNRR + +WE LK R+F  FR   +  L ++L+RIQQEG+Y +Y+K
Sbjct: 123 VSFGQDEVDWYRWSHNRRKVESWEDLKTRMFEFFRDTGQRSLGARLIRIQQEGSYSDYVK 182

Query: 246 KFGTYSAPLPNTV-------------PA----------------------VSDWNVALKL 305
           KF  YSAPLP+               PA                      V+D N+ALKL
Sbjct: 183 KFVNYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPQTLEDCMMAAQLVNDRNLALKL 242

Query: 306 AAEEMG-----------------SDRGLAQQGGVNPK----------ERGNPRQRRIRKK 365
           A  EMG                 +D+G+ ++     K          ++G P  +R+   
Sbjct: 243 AQAEMGIIEPKRSESAGNKVQWNNDKGMMRKNEFQMKQITIPLKGSYQKGEPPVKRLSDA 302

Query: 366 K-RSHVANYLMLR-------------RRKRIYEVELLNEE---------------VLEMK 425
           + R+ +   L  R             + KR   + +LNEE                +E+ 
Sbjct: 303 EFRARLDKGLCFRCNEKYSHGHRCKIKEKRELMLFILNEEESTEEGEGSEAPNTGPVEIN 362

Query: 426 VLEVDNNVEVALRSILGFSATRTMKLKGLAAGKEVVVM------------RLVDELQLPL 469
            LE      +  R+I   +   TMKL+G+  GKEV+V+             LV E ++P+
Sbjct: 363 QLEEPEETMIEYRAITSLTTKGTMKLRGIVKGKEVIVLIDSGATHNFIHHELVTERKIPI 422

BLAST of Clc06G11510 vs. ExPASy TrEMBL
Match: A0A5A7UYM1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002110 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.9e-62
Identity = 175/509 (34.38%), Postives = 261/509 (51.28%), Query Frame = 0

Query: 66  KREIEEKIENNVQGIFELKEWMIEMSKTIDLVAANV-QNLMNLREEGSVLQSRTLPTSKE 125
           +R++EE++E   + +  +KE ++EM K ++ +A  + +N    ++E S   S       +
Sbjct: 3   QRQMEERVEGTEKELLSMKEMLLEMKKAVERLADEMKENHSYKKKEESGTTSDGSVMKLK 62

Query: 126 KETEEGESSHRRSGNEVDRSKYKRLEMPILSGENPDSWVYRAEHYFEIHELDDLEKIKVA 185
            + +E E     +G   DRSKYK+LEMP+  GENP+SWVYRAEH+FEI+ L + EK+KVA
Sbjct: 63  GKMDETEPITEINGTVTDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLSESEKVKVA 122

Query: 186 IIAFAPDGVDWFRWTHNRRPILTWEALKERLFSLFRPAQEGMLLSQLLRIQQEGTYEEYL 245
           +++F  D VDW+RW+HNR+ + +WE LK R+F  FR + +  L ++L+RIQQEG+Y EY+
Sbjct: 123 VVSFGQDEVDWYRWSHNRKKVESWEDLKSRMFEFFRDSGQKSLGARLIRIQQEGSYNEYV 182

Query: 246 KKFGTYSAPLP-----------------------------------NTVPAVSDWNVALK 305
           KKF TYSAPLP                                        V+D N ALK
Sbjct: 183 KKFVTYSAPLPYMAESVLVDAFVTGLEPSLQAEVISRHPQTLEDCMREAQLVNDRNYALK 242

Query: 306 LAAEEM-------GSDRGLAQQGGVN---PK-----------------ERGNPRQRRIRK 365
           L+  E+       G    + + G V+   P+                 ++G P  +R+  
Sbjct: 243 LSKMELGMTEWEVGGSSKVKKLGDVDKPPPRKTDFQMKQITIPIKGNFKKGEPPVKRLSD 302

Query: 366 KK-RSHVANYLMLR-------------RRKRIYEVELLN---------------EEVLEM 425
            + R+ +   L  R             + KR     ++N               EE +E+
Sbjct: 303 AEFRARLDRGLCFRCNDKYSPGHRCKTKEKRELMFFIMNEEEEDEEGDSQEEVIEETVEL 362

Query: 426 KVLEVDNNVEVALRSILGFSATRTMKLKGLAAGKEVVVM------------RLVDELQLP 469
           K LE+ +   + L+++   S+  TMKLKG    KEVVV+             L  EL+L 
Sbjct: 363 KTLELTDETAIELKTMTRISSKGTMKLKGWIRQKEVVVLIDSGATHNFIHHSLAAELELG 422

BLAST of Clc06G11510 vs. ExPASy TrEMBL
Match: A0A5A7V194 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G002120 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.9e-62
Identity = 166/508 (32.68%), Postives = 262/508 (51.57%), Query Frame = 0

Query: 66  KREIEEKIENNVQGIFELKEWMIEMSKTIDLVAANVQNLMNLREEGSVLQSRTLPTSKEK 125
           +R++EE++E   + +  LKE M+EM K++D +A  +++    ++E S     ++   K K
Sbjct: 3   QRQMEERLEGTEKEVLSLKEMMLEMKKSMDRLADELRDQSYKKKEESGTSDGSIMKMKGK 62

Query: 126 ETEEGESSHRRSGNEVDRSKYKRLEMPILSGENPDSWVYRAEHYFEIHELDDLEKIKVAI 185
             EE + +     +++DRSKYK+LEMP+  GENP+SWVYRAEH+FEI+ L + EK+KVA+
Sbjct: 63  -MEETDVTGEIHTHQIDRSKYKKLEMPMFLGENPESWVYRAEHFFEINNLPEAEKVKVAV 122

Query: 186 IAFAPDGVDWFRWTHNRRPILTWEALKERLFSLFRPAQEGMLLSQLLRIQQEGTYEEYLK 245
           ++F  D VDW+RW+HNRR + +WE LK R+F  FR   +  L ++L+RIQQEG+Y +Y+K
Sbjct: 123 VSFGQDEVDWYRWSHNRRKVESWEDLKTRMFEFFRDTGQRSLGARLIRIQQEGSYSDYVK 182

Query: 246 KFGTYSAPLPNTV-------------PA----------------------VSDWNVALKL 305
           KF  YSAPLP+               PA                      V+D N+ALKL
Sbjct: 183 KFVNYSAPLPHMAESVLRDAFLTGLEPALQAEVMSRHPQTLEDCMMAAQLVNDRNLALKL 242

Query: 306 AAEEMG-----------------SDRGLAQQGGVNPK----------ERGNPRQRRIRKK 365
           A  EMG                 +D+G+ ++     K          ++G P  +R+   
Sbjct: 243 AQAEMGIIEPKRSESAGNKVQWNNDKGMMRKNEFQMKQITIPLKGSYQKGEPPVKRLSDA 302

Query: 366 K-RSHVANYLMLR-------------RRKRIYEVELLNEE---------------VLEMK 425
           + R+ +   L  R             + KR   + +LNEE                +E+ 
Sbjct: 303 EFRARLDKGLCFRCNEKYSHGHRCKIKEKRELMLFILNEEESIEEGEGSEAPNTGPVEIN 362

Query: 426 VLEVDNNVEVALRSILGFSATRTMKLKGLAAGKEVVVM------------RLVDELQLPL 469
            LE      +  R+I   +   TMKL+G+  GKEV+V+             LV E ++P+
Sbjct: 363 QLEEPEETMIEYRAITSLTTKGTMKLRGIVKGKEVIVLIDSGATHNFIHHELVTERKIPI 422

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0061366.14.0e-6434.06retrotransposon protein [Cucumis melo var. makuwa] >TYK14721.1 retrotransposon p... [more]
KAA0056659.13.7e-6232.48Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
KAA0061073.11.4e-6134.38Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
TYK21035.11.4e-6132.68Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK30523.1 Ty3/gyp... [more]
KAA0059481.11.4e-6132.68Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7V4F51.9e-6434.06Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7UT211.8e-6232.48Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3E3256.9e-6232.68Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7UYM16.9e-6234.38Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7V1946.9e-6232.68Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 277..304
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..142
NoneNo IPR availablePANTHERPTHR34482:SF28OS02G0566300 PROTEINcoord: 132..252
NoneNo IPR availablePANTHERPTHR34482DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKEcoord: 132..252
NoneNo IPR availablePANTHERPTHR34482:SF28OS02G0566300 PROTEINcoord: 372..466
NoneNo IPR availablePANTHERPTHR34482DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKEcoord: 372..466

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc06G11510.1Clc06G11510.1mRNA