Homology
BLAST of Clc06G10720 vs. NCBI nr
Match:
WP_217833161.1 (DDE-type integrase/transposase/recombinase, partial [Synechococcus sp. PCC 7002])
HSP 1 Score: 535.8 bits (1379), Expect = 3.0e-148
Identity = 266/344 (77.33%), Postives = 278/344 (80.81%), Query Frame = 0
Query: 1 MNAESQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRC 60
M A+SQEPWY DIVNYLVCNQWPEE NA QKKKL++ESKFYCWDEPYLYRLG DHILRRC
Sbjct: 23 MKAKSQEPWYTDIVNYLVCNQWPEEFNAHQKKKLRHESKFYCWDEPYLYRLGLDHILRRC 82
Query: 61 VPEYETHSILRSCHEAPYGGHFGGR---------------------------EQLQRTVN 120
VPEYETHSIL+SCHEAPYGGHFGG+ ++ QRT N
Sbjct: 83 VPEYETHSILKSCHEAPYGGHFGGQRTAAKVLQSGYFWPTLFKDARAYAVACDRCQRTGN 142
Query: 121 ISNQNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDAN 180
ISN+NEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDAN
Sbjct: 143 ISNRNEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDAN 202
Query: 181 TVSKFLKKQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEI 240
TVSKFLKKQIFSRFGTPRAIISDEGT FINRIITNLLTKFNVSHRVAT YHPQTN QAEI
Sbjct: 203 TVSKFLKKQIFSRFGTPRAIISDEGTHFINRIITNLLTKFNVSHRVATAYHPQTNDQAEI 262
Query: 241 TNREIKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL-------------- 291
TN+EIKSILEKVVSTSRKDW ERLDEALWAYRT FKTPIGMSPYAL
Sbjct: 263 TNQEIKSILEKVVSTSRKDWTERLDEALWAYRTTFKTPIGMSPYALVFGKACHLSLELEH 322
BLAST of Clc06G10720 vs. NCBI nr
Match:
PIM97577.1 (DNA-directed DNA polymerase [Handroanthus impetiginosus])
HSP 1 Score: 474.6 bits (1220), Expect = 8.3e-130
Identity = 241/430 (56.05%), Postives = 294/430 (68.37%), Query Frame = 0
Query: 5 SQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEY 64
S PWYADIVNYL C P +L+AQQKKK ++++ Y WD+P+L++ G D+ILRRCVPE
Sbjct: 1146 SDVPWYADIVNYLTCGIIPFDLSAQQKKKFLFDTRRYFWDDPFLFKQGPDNILRRCVPEI 1205
Query: 65 ETHSILRSCHEAPYGGHFGGR---------------------------EQLQRTVNISNQ 124
E + IL CH +PYGGHF G ++ QRT NIS +
Sbjct: 1206 EMNDILEQCHASPYGGHFHGDRTAAKILQSGFFWPNLFKDAHSFVANCDRCQRTGNISRR 1265
Query: 125 NEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSK 184
+EMPLN++LEVELFDVWGIDFMGPF PS GN YILVAVDYVSKWVEAAA ND+ V
Sbjct: 1266 HEMPLNTILEVELFDVWGIDFMGPFIPSFGNMYILVAVDYVSKWVEAAAVPNNDSKVVVN 1325
Query: 185 FLKKQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNRE 244
F+KK IF+RFGTPRAIISD GT F NR LL+K+ V H+++T YHPQT+GQ E++NRE
Sbjct: 1326 FIKKNIFTRFGTPRAIISDGGTHFCNRSFEALLSKYGVKHKISTPYHPQTSGQVEVSNRE 1385
Query: 245 IKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL------------------ 304
IK ILEK VS++RKDW +RLDEALWAYRTA+KTPIGMSPY L
Sbjct: 1386 IKRILEKTVSSTRKDWSKRLDEALWAYRTAYKTPIGMSPYRLVFGKACHLPVELEHNAYW 1445
Query: 305 ---------DASGEARKLQLNELLKWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKV 364
A+GE R LQLNEL ++R AYENAK+YKE+ K+WH+K I ++ GQ V
Sbjct: 1446 AIRKLNFDMQAAGEKRLLQLNELDEFRLHAYENAKIYKEKKKRWHEKKIVERHFEPGQYV 1505
Query: 365 LLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDETTSFKVNGQRVKPYHIEELE 381
LLFNS+L+LFPGKLKSRWSGPF I EV PHGAV+L N++ FKVN QR+K Y E ++
Sbjct: 1506 LLFNSRLKLFPGKLKSRWSGPFRITEVFPHGAVELENKNSRNRFKVNAQRIKHYWGEIVD 1565
BLAST of Clc06G10720 vs. NCBI nr
Match:
PIN14790.1 (DNA-directed DNA polymerase [Handroanthus impetiginosus])
HSP 1 Score: 469.2 bits (1206), Expect = 3.5e-128
Identity = 240/430 (55.81%), Postives = 292/430 (67.91%), Query Frame = 0
Query: 5 SQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEY 64
S PWYADIVNYL C P +L+AQQKKK+ ++++ Y WD+ +L++ G D+ILRRCVPE
Sbjct: 845 SDVPWYADIVNYLTCGIIPFDLSAQQKKKILFDTRRYFWDDLFLFKQGPDNILRRCVPEM 904
Query: 65 ETHSILRSCHEAPYGGHFGGR---------------------------EQLQRTVNISNQ 124
E + IL CH +PYGGHF G ++ QRT NIS +
Sbjct: 905 EMNDILEQCHASPYGGHFHGDRTAAKILQSGFFWPNLFKDANSFVANCDRCQRTGNISRR 964
Query: 125 NEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSK 184
+EMPLN++LEVELFDVWGIDFMG F PS GN YILVAVDYVSKWVEA A ND+ V
Sbjct: 965 HEMPLNTILEVELFDVWGIDFMGLFVPSFGNMYILVAVDYVSKWVEAVAVPNNDSKVVVN 1024
Query: 185 FLKKQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNRE 244
F+KK IF+RFGTPRAIIS+ GT F NR LL+K+ V H+++T YHPQT+GQ E++NRE
Sbjct: 1025 FIKKNIFTRFGTPRAIISNGGTHFCNRSFEALLSKYGVKHKISTPYHPQTSGQVEVSNRE 1084
Query: 245 IKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL------------------ 304
IK ILEK VS++RKDW +RLDEALWAYRTAFKTPIGMSPY L
Sbjct: 1085 IKRILEKTVSSTRKDWSKRLDEALWAYRTAFKTPIGMSPYKLVFGKACHLPVELEHNAYW 1144
Query: 305 ---------DASGEARKLQLNELLKWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKV 364
A+GE R LQLNEL ++R AYENAK+YKE+TK+WHDK I ++ GQ V
Sbjct: 1145 AIRKLNFDMQAAGEKRLLQLNELDEFRLQAYENAKIYKEKTKRWHDKKIVERRFEPGQYV 1204
Query: 365 LLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDETTSFKVNGQRVKPYHIEELE 381
LLFNS+L+LFPGKLKSRWSGPF + EV HGAV+L NE+ FKVN QR+K Y ++
Sbjct: 1205 LLFNSRLKLFPGKLKSRWSGPFRVTEVFSHGAVELENENSKNRFKVNAQRIKHYWGGVID 1264
BLAST of Clc06G10720 vs. NCBI nr
Match:
PNY03357.1 (hypothetical protein L195_g026684, partial [Trifolium pratense])
HSP 1 Score: 464.9 bits (1195), Expect = 6.6e-127
Identity = 234/425 (55.06%), Postives = 286/425 (67.29%), Query Frame = 0
Query: 8 PWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETH 67
PW+AD NY+V P + +QQ+KK ++ KFY WDEP+LY+ G D +LRRCVPE E
Sbjct: 71 PWFADFANYMVGKTIPSDFTSQQRKKFLHDCKFYVWDEPFLYKRGVDGLLRRCVPEDEQE 130
Query: 68 SILRSCHEAPYGGHFGGR---------------------------EQLQRTVNISNQNEM 127
+L CH++ YGGHF G ++ QRT NIS +NEM
Sbjct: 131 KVLWHCHDSSYGGHFSGDRTAAKVLQSGLFWPTLFKDAFTYVKRCDRCQRTGNISKRNEM 190
Query: 128 PLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLK 187
P N +LEVE+FDVWGIDFMGPFP S YILVAVDYVSKWVEA A NDA V FLK
Sbjct: 191 PQNPVLEVEIFDVWGIDFMGPFPSSYSKTYILVAVDYVSKWVEAIATQTNDAQVVVSFLK 250
Query: 188 KQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKS 247
K IFSRFG PRA+ISDEGT F+NR + LL K+NV HR+AT YHPQT+GQ E++NR+IK
Sbjct: 251 KNIFSRFGVPRALISDEGTHFLNRKMEALLRKYNVHHRIATPYHPQTSGQVEVSNRQIKQ 310
Query: 248 ILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYA---------------------- 307
ILEK V++SRKDW +LD+ALWAYRTAFKTPIGMSP+
Sbjct: 311 ILEKTVNSSRKDWSLKLDDALWAYRTAFKTPIGMSPFQIVYGKSCHLPLELEHKALWATK 370
Query: 308 -----LDASGEARKLQLNELLKWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLF 367
L +GE+R LQL+EL ++R+ AYENAK++KE+TKKWHDK I + GQ VLLF
Sbjct: 371 FLNFDLSKAGESRILQLHELDEFRNFAYENAKIFKEKTKKWHDKKIQNREFREGQLVLLF 430
Query: 368 NSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDETTSFKVNGQRVKPYHIEELEIDK 379
NS+L+LFPGKLKSRWSGPF IK+V PHGAV+L + D +FKVNGQR+KPY +E + +
Sbjct: 431 NSRLKLFPGKLKSRWSGPFKIKKVFPHGAVELEDRDTDQTFKVNGQRLKPYFGKESILPR 490
BLAST of Clc06G10720 vs. NCBI nr
Match:
PIN00904.1 (DNA-directed DNA polymerase [Handroanthus impetiginosus])
HSP 1 Score: 462.2 bits (1188), Expect = 4.3e-126
Identity = 237/432 (54.86%), Postives = 290/432 (67.13%), Query Frame = 0
Query: 5 SQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEY 64
S PWYADIVNYL C P +L+ QQKKK+ ++++ Y W++P+L + G D+ILRRCVPE
Sbjct: 1139 SNVPWYADIVNYLTCGIIPFDLSTQQKKKILFDTRRYFWNDPFLLKQGPDNILRRCVPEI 1198
Query: 65 ETHSILRSCHEAPYGGHFGGR---------------------------EQLQRTVNISNQ 124
E + IL CH +PYGGHF G ++ QRT NIS +
Sbjct: 1199 EMNDILEQCHASPYGGHFHGDRTAAKILQSGFFWPNLFKDAHSFVANCDRCQRTRNISRR 1258
Query: 125 NEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSK 184
+EMPLN++LEVELFDVWGIDFMGPF PS GN YILVAVDYVSKWVEAAA ND+ V
Sbjct: 1259 HEMPLNTILEVELFDVWGIDFMGPFVPSFGNMYILVAVDYVSKWVEAAAVPNNDSKVVVN 1318
Query: 185 FLKKQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNRE 244
F+KK IF+RFGTPRAIISD T F NR LL+K+ V H++ T YHPQT+G E++NRE
Sbjct: 1319 FIKKNIFTRFGTPRAIISDGETYFCNRSFEALLSKYGVKHKIFTPYHPQTSGHVEVSNRE 1378
Query: 245 IKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL------------------ 304
IK ILEK VS++RKDW +RLDEALWAYRTA+KTPIGMSPY L
Sbjct: 1379 IKRILEKTVSSTRKDWSKRLDEALWAYRTAYKTPIGMSPYHLIFGKACHLPVELEHNAYW 1438
Query: 305 ---------DASGEARKLQLNELLKWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKV 364
A+GE R LQLNEL ++R AYENAK+YKE+TK+WHDK I ++ GQ V
Sbjct: 1439 AICKLNFDMQAAGEKRLLQLNELDEFRLHAYENAKIYKEKTKRWHDKKIVERHFEPGQYV 1498
Query: 365 LLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDETTSFKVNGQRVKPYHIEELE 383
LLFNS+L+LFPGKLKSRW G F I EV PHGAV+L NE+ FK+N +R+K Y ++
Sbjct: 1499 LLFNSRLKLFPGKLKSRWFGLFRITEVFPHGAVELENENSRNRFKINARRIKHYWGGIID 1558
BLAST of Clc06G10720 vs. ExPASy Swiss-Prot
Match:
P26810 (Gag-Pol polyprotein OS=Friend murine leukemia virus (isolate 57) OX=11796 GN=pol PE=3 SV=2)
HSP 1 Score: 96.3 bits (238), Expect = 8.1e-19
Identity = 71/242 (29.34%), Postives = 111/242 (45.87%), Query Frame = 0
Query: 114 WGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAI 173
W IDF P G +Y+LV VD S WVEA K A V+K L ++IF RFG P+ +
Sbjct: 1453 WEIDFTEVKPGLYGYKYLLVFVDTFSGWVEAFPTKKETAKVVTKKLLEEIFPRFGMPQVL 1512
Query: 174 ISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKV-VSTSRKD 233
+D G F++++ + V ++ Y PQ++GQ E NR IK L K+ ++T +D
Sbjct: 1513 GTDNGPAFVSKVSQTVADLLGVDWKLHCAYRPQSSGQVERMNRTIKETLTKLTLATGSRD 1572
Query: 234 WIERLDEALWAYRTAFKTPIGMSPYAL--DASGEARKLQLNELLKWRHSAYENA---KLY 293
W+ L AL+ R P G++PY + A ++ K H+ A LY
Sbjct: 1573 WVLLLPLALYRARNT-PGPHGLTPYEILYGAPPPLVNFPDPDMAKVTHNPSLQAHLQALY 1632
Query: 294 KERTKKWH----------DKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEV 340
+ + W D+ + VG V + + + L+ RW GP+ +
Sbjct: 1633 LVQHEVWRPLAAAYQEQLDRPVVPHPFRVGDTVWVRRHQTK----NLEPRWKGPYTVLLT 1689
BLAST of Clc06G10720 vs. ExPASy Swiss-Prot
Match:
P26808 (Gag-Pol polyprotein OS=Friend murine leukemia virus (isolate PVC-211) OX=11798 GN=pol PE=3 SV=2)
HSP 1 Score: 96.3 bits (238), Expect = 8.1e-19
Identity = 71/242 (29.34%), Postives = 111/242 (45.87%), Query Frame = 0
Query: 114 WGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAI 173
W IDF P G +Y+LV VD S WVEA K A V+K L ++IF RFG P+ +
Sbjct: 1452 WEIDFTEVKPGLYGYKYLLVFVDTFSGWVEAFPTKKETAKVVTKKLLEEIFPRFGMPQVL 1511
Query: 174 ISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKV-VSTSRKD 233
+D G F++++ + V ++ Y PQ++GQ E NR IK L K+ ++T +D
Sbjct: 1512 GTDNGPAFVSKVSQTVADLLGVDWKLHCAYRPQSSGQVERMNRTIKETLTKLTLATGSRD 1571
Query: 234 WIERLDEALWAYRTAFKTPIGMSPYAL--DASGEARKLQLNELLKWRHSAYENA---KLY 293
W+ L AL+ R P G++PY + A ++ K H+ A LY
Sbjct: 1572 WVLLLPLALYRARNT-PGPHGLTPYEILYGAPPPLVNFPDPDMAKVTHNPSLQAHLQALY 1631
Query: 294 KERTKKWH----------DKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEV 340
+ + W D+ + VG V + + + L+ RW GP+ +
Sbjct: 1632 LVQHEVWRPLAAAYQEQLDRPVVPHPFRVGDTVWVRRHQTK----NLEPRWKGPYTVLLT 1688
BLAST of Clc06G10720 vs. ExPASy Swiss-Prot
Match:
P08361 (Gag-Pol polyprotein OS=Cas-Br-E murine leukemia virus OX=11792 GN=gag-pol PE=3 SV=2)
HSP 1 Score: 95.9 bits (237), Expect = 1.1e-18
Identity = 52/147 (35.37%), Postives = 80/147 (54.42%), Query Frame = 0
Query: 114 WGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAI 173
W IDF P G +Y+LV VD S W+EA K A V+K L ++IF RFG P+ +
Sbjct: 1450 WEIDFTEVKPGLYGYKYLLVFVDTFSGWIEAFPTKKETAKVVTKKLLEEIFPRFGMPQVL 1509
Query: 174 ISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKV-VSTSRKD 233
+D G F++++ + + ++ Y PQ++GQ E NR IK L K+ ++T +D
Sbjct: 1510 GTDNGPAFVSKVSQTVADLLGIDWKLHCAYRPQSSGQVERMNRTIKETLTKLTLATGSRD 1569
Query: 234 WIERLDEALWAYRTAFKTPIGMSPYAL 260
W+ L AL+ R P G++PY +
Sbjct: 1570 WVLLLPLALYRARNT-PGPHGLTPYEI 1595
BLAST of Clc06G10720 vs. ExPASy Swiss-Prot
Match:
P26809 (Gag-Pol polyprotein OS=Friend murine leukemia virus (isolate FB29) OX=11797 GN=pol PE=3 SV=2)
HSP 1 Score: 95.9 bits (237), Expect = 1.1e-18
Identity = 70/242 (28.93%), Postives = 111/242 (45.87%), Query Frame = 0
Query: 114 WGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAI 173
W IDF P G +Y+LV +D S WVEA K A V+K L ++IF RFG P+ +
Sbjct: 1452 WEIDFTEVKPGLYGYKYLLVFIDTFSGWVEAFPTKKETAKVVTKKLLEEIFPRFGMPQVL 1511
Query: 174 ISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKV-VSTSRKD 233
+D G F++++ + V ++ Y PQ++GQ E NR IK L K+ ++T +D
Sbjct: 1512 GTDNGPAFVSKVSQTVADLLGVDWKLHCAYRPQSSGQVERMNRTIKETLTKLTLATGSRD 1571
Query: 234 WIERLDEALWAYRTAFKTPIGMSPYAL--DASGEARKLQLNELLKWRHSAYENA---KLY 293
W+ L AL+ R P G++PY + A ++ K H+ A LY
Sbjct: 1572 WVLLLPLALYRARNT-PGPHGLTPYEILYGAPPPLVNFPDPDMAKVTHNPSLQAHLQALY 1631
Query: 294 KERTKKWH----------DKNISKKTLYVGQKVLLFNSKLRLFPGKLKSRWSGPFIIKEV 340
+ + W D+ + VG V + + + L+ RW GP+ +
Sbjct: 1632 LVQHEVWRPLAAAYQEQLDRPVVPHPFRVGDTVWVRRHQTK----NLEPRWKGPYTVLLT 1688
BLAST of Clc06G10720 vs. ExPASy Swiss-Prot
Match:
P31792 (Pol polyprotein (Fragment) OS=Feline endogenous virus ECE1 OX=11766 GN=pol PE=3 SV=1)
HSP 1 Score: 95.1 bits (235), Expect = 1.8e-18
Identity = 54/147 (36.73%), Postives = 78/147 (53.06%), Query Frame = 0
Query: 114 WGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLKKQIFSRFGTPRAI 173
W IDF P G +Y+LV VD S WVEA + A+ V+K + ++IF RFG P+ I
Sbjct: 765 WEIDFTEVKPHYAGYKYLLVFVDTFSGWVEAYPTRQETAHMVAKKILEEIFPRFGLPKVI 824
Query: 174 ISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKSILEKV-VSTSRKD 233
SD G F++++ L ++ ++ Y PQ++GQ E NR IK L K+ + T KD
Sbjct: 825 GSDNGPAFVSQVSQGLARTLGINWKLHCAYRPQSSGQVERMNRTIKETLTKLTLETGLKD 884
Query: 234 WIERLDEALWAYRTAFKTPIGMSPYAL 260
W L AL R G++PY +
Sbjct: 885 WRRLLSLALLRARNT-PNRFGLTPYEI 910
BLAST of Clc06G10720 vs. ExPASy TrEMBL
Match:
A0A2G9FWY3 (Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29952 PE=4 SV=1)
HSP 1 Score: 474.6 bits (1220), Expect = 4.0e-130
Identity = 241/430 (56.05%), Postives = 294/430 (68.37%), Query Frame = 0
Query: 5 SQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEY 64
S PWYADIVNYL C P +L+AQQKKK ++++ Y WD+P+L++ G D+ILRRCVPE
Sbjct: 1146 SDVPWYADIVNYLTCGIIPFDLSAQQKKKFLFDTRRYFWDDPFLFKQGPDNILRRCVPEI 1205
Query: 65 ETHSILRSCHEAPYGGHFGGR---------------------------EQLQRTVNISNQ 124
E + IL CH +PYGGHF G ++ QRT NIS +
Sbjct: 1206 EMNDILEQCHASPYGGHFHGDRTAAKILQSGFFWPNLFKDAHSFVANCDRCQRTGNISRR 1265
Query: 125 NEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSK 184
+EMPLN++LEVELFDVWGIDFMGPF PS GN YILVAVDYVSKWVEAAA ND+ V
Sbjct: 1266 HEMPLNTILEVELFDVWGIDFMGPFIPSFGNMYILVAVDYVSKWVEAAAVPNNDSKVVVN 1325
Query: 185 FLKKQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNRE 244
F+KK IF+RFGTPRAIISD GT F NR LL+K+ V H+++T YHPQT+GQ E++NRE
Sbjct: 1326 FIKKNIFTRFGTPRAIISDGGTHFCNRSFEALLSKYGVKHKISTPYHPQTSGQVEVSNRE 1385
Query: 245 IKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL------------------ 304
IK ILEK VS++RKDW +RLDEALWAYRTA+KTPIGMSPY L
Sbjct: 1386 IKRILEKTVSSTRKDWSKRLDEALWAYRTAYKTPIGMSPYRLVFGKACHLPVELEHNAYW 1445
Query: 305 ---------DASGEARKLQLNELLKWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKV 364
A+GE R LQLNEL ++R AYENAK+YKE+ K+WH+K I ++ GQ V
Sbjct: 1446 AIRKLNFDMQAAGEKRLLQLNELDEFRLHAYENAKIYKEKKKRWHEKKIVERHFEPGQYV 1505
Query: 365 LLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDETTSFKVNGQRVKPYHIEELE 381
LLFNS+L+LFPGKLKSRWSGPF I EV PHGAV+L N++ FKVN QR+K Y E ++
Sbjct: 1506 LLFNSRLKLFPGKLKSRWSGPFRITEVFPHGAVELENKNSRNRFKVNAQRIKHYWGEIVD 1565
BLAST of Clc06G10720 vs. ExPASy TrEMBL
Match:
A0A2G9HBV9 (DNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_12579 PE=4 SV=1)
HSP 1 Score: 469.2 bits (1206), Expect = 1.7e-128
Identity = 240/430 (55.81%), Postives = 292/430 (67.91%), Query Frame = 0
Query: 5 SQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEY 64
S PWYADIVNYL C P +L+AQQKKK+ ++++ Y WD+ +L++ G D+ILRRCVPE
Sbjct: 845 SDVPWYADIVNYLTCGIIPFDLSAQQKKKILFDTRRYFWDDLFLFKQGPDNILRRCVPEM 904
Query: 65 ETHSILRSCHEAPYGGHFGGR---------------------------EQLQRTVNISNQ 124
E + IL CH +PYGGHF G ++ QRT NIS +
Sbjct: 905 EMNDILEQCHASPYGGHFHGDRTAAKILQSGFFWPNLFKDANSFVANCDRCQRTGNISRR 964
Query: 125 NEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSK 184
+EMPLN++LEVELFDVWGIDFMG F PS GN YILVAVDYVSKWVEA A ND+ V
Sbjct: 965 HEMPLNTILEVELFDVWGIDFMGLFVPSFGNMYILVAVDYVSKWVEAVAVPNNDSKVVVN 1024
Query: 185 FLKKQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNRE 244
F+KK IF+RFGTPRAIIS+ GT F NR LL+K+ V H+++T YHPQT+GQ E++NRE
Sbjct: 1025 FIKKNIFTRFGTPRAIISNGGTHFCNRSFEALLSKYGVKHKISTPYHPQTSGQVEVSNRE 1084
Query: 245 IKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL------------------ 304
IK ILEK VS++RKDW +RLDEALWAYRTAFKTPIGMSPY L
Sbjct: 1085 IKRILEKTVSSTRKDWSKRLDEALWAYRTAFKTPIGMSPYKLVFGKACHLPVELEHNAYW 1144
Query: 305 ---------DASGEARKLQLNELLKWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKV 364
A+GE R LQLNEL ++R AYENAK+YKE+TK+WHDK I ++ GQ V
Sbjct: 1145 AIRKLNFDMQAAGEKRLLQLNELDEFRLQAYENAKIYKEKTKRWHDKKIVERRFEPGQYV 1204
Query: 365 LLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDETTSFKVNGQRVKPYHIEELE 381
LLFNS+L+LFPGKLKSRWSGPF + EV HGAV+L NE+ FKVN QR+K Y ++
Sbjct: 1205 LLFNSRLKLFPGKLKSRWSGPFRVTEVFSHGAVELENENSKNRFKVNAQRIKHYWGGVID 1264
BLAST of Clc06G10720 vs. ExPASy TrEMBL
Match:
A0A2K3NJZ5 (Integrase catalytic domain-containing protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g026684 PE=4 SV=1)
HSP 1 Score: 464.9 bits (1195), Expect = 3.2e-127
Identity = 234/425 (55.06%), Postives = 286/425 (67.29%), Query Frame = 0
Query: 8 PWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETH 67
PW+AD NY+V P + +QQ+KK ++ KFY WDEP+LY+ G D +LRRCVPE E
Sbjct: 71 PWFADFANYMVGKTIPSDFTSQQRKKFLHDCKFYVWDEPFLYKRGVDGLLRRCVPEDEQE 130
Query: 68 SILRSCHEAPYGGHFGGR---------------------------EQLQRTVNISNQNEM 127
+L CH++ YGGHF G ++ QRT NIS +NEM
Sbjct: 131 KVLWHCHDSSYGGHFSGDRTAAKVLQSGLFWPTLFKDAFTYVKRCDRCQRTGNISKRNEM 190
Query: 128 PLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLK 187
P N +LEVE+FDVWGIDFMGPFP S YILVAVDYVSKWVEA A NDA V FLK
Sbjct: 191 PQNPVLEVEIFDVWGIDFMGPFPSSYSKTYILVAVDYVSKWVEAIATQTNDAQVVVSFLK 250
Query: 188 KQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKS 247
K IFSRFG PRA+ISDEGT F+NR + LL K+NV HR+AT YHPQT+GQ E++NR+IK
Sbjct: 251 KNIFSRFGVPRALISDEGTHFLNRKMEALLRKYNVHHRIATPYHPQTSGQVEVSNRQIKQ 310
Query: 248 ILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYA---------------------- 307
ILEK V++SRKDW +LD+ALWAYRTAFKTPIGMSP+
Sbjct: 311 ILEKTVNSSRKDWSLKLDDALWAYRTAFKTPIGMSPFQIVYGKSCHLPLELEHKALWATK 370
Query: 308 -----LDASGEARKLQLNELLKWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLF 367
L +GE+R LQL+EL ++R+ AYENAK++KE+TKKWHDK I + GQ VLLF
Sbjct: 371 FLNFDLSKAGESRILQLHELDEFRNFAYENAKIFKEKTKKWHDKKIQNREFREGQLVLLF 430
Query: 368 NSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDETTSFKVNGQRVKPYHIEELEIDK 379
NS+L+LFPGKLKSRWSGPF IK+V PHGAV+L + D +FKVNGQR+KPY +E + +
Sbjct: 431 NSRLKLFPGKLKSRWSGPFKIKKVFPHGAVELEDRDTDQTFKVNGQRLKPYFGKESILPR 490
BLAST of Clc06G10720 vs. ExPASy TrEMBL
Match:
A0A2G9G6G2 (Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26592 PE=4 SV=1)
HSP 1 Score: 462.2 bits (1188), Expect = 2.1e-126
Identity = 237/432 (54.86%), Postives = 290/432 (67.13%), Query Frame = 0
Query: 5 SQEPWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEY 64
S PWYADIVNYL C P +L+ QQKKK+ ++++ Y W++P+L + G D+ILRRCVPE
Sbjct: 1139 SNVPWYADIVNYLTCGIIPFDLSTQQKKKILFDTRRYFWNDPFLLKQGPDNILRRCVPEI 1198
Query: 65 ETHSILRSCHEAPYGGHFGGR---------------------------EQLQRTVNISNQ 124
E + IL CH +PYGGHF G ++ QRT NIS +
Sbjct: 1199 EMNDILEQCHASPYGGHFHGDRTAAKILQSGFFWPNLFKDAHSFVANCDRCQRTRNISRR 1258
Query: 125 NEMPLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSK 184
+EMPLN++LEVELFDVWGIDFMGPF PS GN YILVAVDYVSKWVEAAA ND+ V
Sbjct: 1259 HEMPLNTILEVELFDVWGIDFMGPFVPSFGNMYILVAVDYVSKWVEAAAVPNNDSKVVVN 1318
Query: 185 FLKKQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNRE 244
F+KK IF+RFGTPRAIISD T F NR LL+K+ V H++ T YHPQT+G E++NRE
Sbjct: 1319 FIKKNIFTRFGTPRAIISDGETYFCNRSFEALLSKYGVKHKIFTPYHPQTSGHVEVSNRE 1378
Query: 245 IKSILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL------------------ 304
IK ILEK VS++RKDW +RLDEALWAYRTA+KTPIGMSPY L
Sbjct: 1379 IKRILEKTVSSTRKDWSKRLDEALWAYRTAYKTPIGMSPYHLIFGKACHLPVELEHNAYW 1438
Query: 305 ---------DASGEARKLQLNELLKWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKV 364
A+GE R LQLNEL ++R AYENAK+YKE+TK+WHDK I ++ GQ V
Sbjct: 1439 AICKLNFDMQAAGEKRLLQLNELDEFRLHAYENAKIYKEKTKRWHDKKIVERHFEPGQYV 1498
Query: 365 LLFNSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDETTSFKVNGQRVKPYHIEELE 383
LLFNS+L+LFPGKLKSRW G F I EV PHGAV+L NE+ FK+N +R+K Y ++
Sbjct: 1499 LLFNSRLKLFPGKLKSRWFGLFRITEVFPHGAVELENENSRNRFKINARRIKHYWGGIID 1558
BLAST of Clc06G10720 vs. ExPASy TrEMBL
Match:
A0A4Y1RSJ3 (Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_018513 PE=4 SV=1)
HSP 1 Score: 460.7 bits (1184), Expect = 6.0e-126
Identity = 231/427 (54.10%), Postives = 285/427 (66.74%), Query Frame = 0
Query: 8 PWYADIVNYLVCNQWPEELNAQQKKKLQYESKFYCWDEPYLYRLGSDHILRRCVPEYETH 67
PWYAD VNYL C P +++ QKKK K Y WD+PYL++ G D ++RRCVPE E
Sbjct: 162 PWYADFVNYLACGILPPDMSFYQKKKFLSLVKHYYWDDPYLWKHGPDQVIRRCVPETEMA 221
Query: 68 SILRSCHEAPYGGHFGGR---------------------------EQLQRTVNISNQNEM 127
IL CH GGH+G + QRT NIS++N+M
Sbjct: 222 DILLHCHTLACGGHYGASKTTAKVLQSGFFWPTLFKDAQDFVARCDPCQRTGNISSRNQM 281
Query: 128 PLNSMLEVELFDVWGIDFMGPFPPSCGNQYILVAVDYVSKWVEAAACAKNDANTVSKFLK 187
PLN++LEVELFDVWGIDFMGPFP S GN YILVAVDYVSKWVEAAA NDA V +FL+
Sbjct: 282 PLNNILEVELFDVWGIDFMGPFPASYGNLYILVAVDYVSKWVEAAALPTNDAKVVVRFLR 341
Query: 188 KQIFSRFGTPRAIISDEGTDFINRIITNLLTKFNVSHRVATTYHPQTNGQAEITNREIKS 247
K IF+RFG PRAIISD GT F NR +LL K+ ++H+V+T YHPQT+GQ E++NRE+K
Sbjct: 342 KNIFTRFGVPRAIISDGGTHFCNRQFNSLLAKYGITHKVSTPYHPQTSGQVEVSNRELKK 401
Query: 248 ILEKVVSTSRKDWIERLDEALWAYRTAFKTPIGMSPYAL--------------------- 307
ILEK VS SRKDW +LD+ALWAYRTAFK PIGMSPY L
Sbjct: 402 ILEKTVSASRKDWSLKLDDALWAYRTAFKAPIGMSPYRLVFGKACHLPVELEHKAFWAIK 461
Query: 308 ------DASGEARKLQLNELLKWRHSAYENAKLYKERTKKWHDKNISKKTLYVGQKVLLF 367
++GE RKLQLNEL + R+ +YENAK+YK+RTKKWHDK+I KK YVGQ VLL+
Sbjct: 462 TLNFDMSSAGEKRKLQLNELEELRNESYENAKIYKDRTKKWHDKHILKKEFYVGQSVLLY 521
Query: 368 NSKLRLFPGKLKSRWSGPFIIKEVSPHGAVKLTNEDETTSFKVNGQRVKPYHIEELEIDK 381
NS+L+LFPGKL+SRWSGPF + V P+G V++ N+ + T+FKVNG R+KPY ++
Sbjct: 522 NSRLKLFPGKLRSRWSGPFTVLTVYPYGTVEIKNDRDGTTFKVNGHRLKPYVAAAFLEEE 581
BLAST of Clc06G10720 vs. TAIR 10
Match:
ATMG00750.1 (GAG/POL/ENV polyprotein )
HSP 1 Score: 43.5 bits (101), Expect = 4.4e-04
Identity = 20/40 (50.00%), Postives = 26/40 (65.00%), Query Frame = 0
Query: 80 GHFGGREQLQRTVNISNQNEMPLNSMLEVELFDVWGIDFM 120
G + QR N + +NEMP + +LEVE+FDVWGI FM
Sbjct: 51 GFVSSCDACQRKGNFTKRNEMPQHFILEVEVFDVWGIYFM 90
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
WP_217833161.1 | 3.0e-148 | 77.33 | DDE-type integrase/transposase/recombinase, partial [Synechococcus sp. PCC 7002] | [more] |
PIM97577.1 | 8.3e-130 | 56.05 | DNA-directed DNA polymerase [Handroanthus impetiginosus] | [more] |
PIN14790.1 | 3.5e-128 | 55.81 | DNA-directed DNA polymerase [Handroanthus impetiginosus] | [more] |
PNY03357.1 | 6.6e-127 | 55.06 | hypothetical protein L195_g026684, partial [Trifolium pratense] | [more] |
PIN00904.1 | 4.3e-126 | 54.86 | DNA-directed DNA polymerase [Handroanthus impetiginosus] | [more] |
Match Name | E-value | Identity | Description | |
P26810 | 8.1e-19 | 29.34 | Gag-Pol polyprotein OS=Friend murine leukemia virus (isolate 57) OX=11796 GN=pol... | [more] |
P26808 | 8.1e-19 | 29.34 | Gag-Pol polyprotein OS=Friend murine leukemia virus (isolate PVC-211) OX=11798 G... | [more] |
P08361 | 1.1e-18 | 35.37 | Gag-Pol polyprotein OS=Cas-Br-E murine leukemia virus OX=11792 GN=gag-pol PE=3 S... | [more] |
P26809 | 1.1e-18 | 28.93 | Gag-Pol polyprotein OS=Friend murine leukemia virus (isolate FB29) OX=11797 GN=p... | [more] |
P31792 | 1.8e-18 | 36.73 | Pol polyprotein (Fragment) OS=Feline endogenous virus ECE1 OX=11766 GN=pol PE=3 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A2G9FWY3 | 4.0e-130 | 56.05 | Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_29952 PE=... | [more] |
A0A2G9HBV9 | 1.7e-128 | 55.81 | DNA-directed DNA polymerase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_125... | [more] |
A0A2K3NJZ5 | 3.2e-127 | 55.06 | Integrase catalytic domain-containing protein (Fragment) OS=Trifolium pratense O... | [more] |
A0A2G9G6G2 | 2.1e-126 | 54.86 | Reverse transcriptase OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26592 PE=... | [more] |
A0A4Y1RSJ3 | 6.0e-126 | 54.10 | Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_018513 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
ATMG00750.1 | 4.4e-04 | 50.00 | GAG/POL/ENV polyprotein | [more] |