Clc05G26590 (gene) Watermelon (cordophanus) v2

Overview
NameClc05G26590
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationClcChr05: 34029372 .. 34031960 (-)
RNA-Seq ExpressionClc05G26590
SyntenyClc05G26590
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTATCTCCTGTATTCCAACTTGCCAATTCACTCTCACAAAACCAAGCTTCACCTTTTCCAAGAATGAGTTCATGAATCCACCCCACCCTCTTTCTCTTTTGTCCAAATGTACATCTCTCAGGGAGCTCAAGCAAATTCAAGCCTATACCATCAAAACCAATCTTCAGAATGACATCTCTATTCTCACTAAGCTCATTAATTTCTGCACACTCAACCCCACAATTTCGTCCATGGACCATGCCCACCATCTGTTCGATCAAATTCCTGACAAGGATATTGTCCTCTTTAACATAATGGCACGTGGTTATGCTCGCTCTAATTCTCCCTATCTTGCCTTTTCTCTTTTTGCTCAACTCCTGTGCTCTGGCCTTCTTCCTGATGACTACACATTCTCGTCCCTTCTCAAGGCGTGTGCGAGTTCTAAGGCCTTGAAAGAAGGTATGGAGTTGCATTGTTTTGCTATTAAACTTGGACTGAATCATAATATTTACATATGCCCAACTCTCATAAATATGTATGCGGAGTGCAATGACATGAATGCAGCACGTGGAGTGTTTGATGAAATGGAGCAGCCATGTATTGTTAGCTATAATGCAATTATCACGGGTTATGCTCGAAGTAGTCAGCCCAACGAGGCTTTGTCGTTGTTTAGAGAATTGCAAGCAAGCAATCTTGAGCCTACTGATGTTACTATGCTTAGTGTAATTATGTCATGTGCTTTGTTGGGAGCACTAGACCTGGCAAGGTGGATTCATGAATATGTTAAGAAGAAAGGGTTTGATAAATATGTGAAGGTGAACACTGCACTTATAGATATGTTTGCAAAATGCGGAAGTCTAACTGATGCTATTTCTATCTTTGAGGGCATGCATGTGAGAGATACACAAGCTTGGTCTGCGATGATAGTTGCATTTGCAACTCATGGGGATGGCTTGAAAGCTATCTCAATGTTTGAAGAGATGAAGAGGGCAGGAGTTAGACCTGATGAGATCACTTTTTTGGGGCTTTTGTATGCTTGTAGTCATGCAGGGCTAGTAGAGCAAGGTAGAGGGTATTTCTATAGTATGTCTAAAAACTATGGAATAACTCCAGGGATCAAACATTATGGGTGTATGGTGGATTTGCTTGGTCGAACAGGTCGTTTAGACGAGGCTTATAACTTCATACATGAACTGGAAATTAAGCCCACACCTATACTCTGGCGCACCTTGTTATCTGCTTGCAGCACCCATGGTAATGTCGACATGGCAAAACGGGTTATTGACAGAATTTTTGAATTAGATGACTCCCATGGAGGGGACTATGTTATATTATCAAACTTGTGTGCTAGAGTGGGAAGATGGGAAGATGTGAATCATTTGAGGAAATTGATGAAAGATAGAGGGGTGGTAAAAGTTCCTGGGTGTAGTTCTGTGGAGGTAAACAATGTAGTACATGAGTTCTTCTCTGGAGATGGAGTTCACTGCATTTCGGTGGAGTTGCGCCGAGCACTTGATGAGTTAATCAAAGAAATAAAGTTGGTGGGATATGTTCCTGATACTTCTTTAGTATATCATGCTGATATGCAAGAGGAAGGGAAAGAACTTGTCCTGAGATATCATAGTGAAAAATTGGCCATGGCTTTTGGACTCCTAAATACACCTCCTGGTACAACAATAAGGGTAGTCAAGAATCTCCGGATTTGTGGAGATTGCCATAACACTGCAAAACTTATATCTTTAATTTTTGGGAGGCAAATCGTAATTAGAGACGTTCAACGATTCCATCAATTTGAAGATGGGAAATGCTCCTGTGGTGATTTCTGGTAATAGAATATGTAGAAATCTCAAGCTATTCTTACAGTTTAATATGTCTTTCCTGCAATGGCCATGGTTTGCTATTATTTAGTATTTCTTCATGGGGAACCTTTATGTGTGTATAGCAACCAAGGAATTCAGAGCAAGATTGATTTGAAGATTGGACCTCCCCATATATTTATCAGTGTAGCATTGATCATTGCATGTATTGGATCAAAATAAAGTAAATAACCATCAGATGAACATATTTCTACACCATCACTACACCATATACCAACACAAACTTAGCTGATCAGTAATTGGTATATATTCCTTTCTTTGAAGTCAGATAATAAAATCTTCATACCCACATTAACTATCGGATGAAATATTTCTAGATCATCAGTGGACTTGCTTTTAAAATCTTTTCTATACTTCCTCTGACAGCCAAGAGTCAACCATGGATTTTGGTTCCTATCTATGGCGCATTCATTTTGCTCCTTCTAATTACAATCAGACCACAGAAGTTGAATGATGAACTTTACCATCTATTACCATTCCTTATTTACTGCAGTAGCCAAGTTCTAGATGCAGTACAGAAGATTAAACATTGGAGACTCATAAAGTTTATTCCAAATTTCCAATTCTGACTTTTTTTAAAAAAAAATTTAATGCTTTACCTATATTTAGCGTGGACAGATTTCTTAAGCATTATTACTCTTTCTTTCTATGTACTAATTTTTTTTGTTCAATTGTTTCTTTAATAAATTATTTATCATAAATTTTGTATCCCCAGTTACGTCCTCGTGA

mRNA sequence

ATGCCTATCTCCTGTATTCCAACTTGCCAATTCACTCTCACAAAACCAAGCTTCACCTTTTCCAAGAATGAGTTCATGAATCCACCCCACCCTCTTTCTCTTTTGTCCAAATGTACATCTCTCAGGGAGCTCAAGCAAATTCAAGCCTATACCATCAAAACCAATCTTCAGAATGACATCTCTATTCTCACTAAGCTCATTAATTTCTGCACACTCAACCCCACAATTTCGTCCATGGACCATGCCCACCATCTGTTCGATCAAATTCCTGACAAGGATATTGTCCTCTTTAACATAATGGCACGTGGTTATGCTCGCTCTAATTCTCCCTATCTTGCCTTTTCTCTTTTTGCTCAACTCCTGTGCTCTGGCCTTCTTCCTGATGACTACACATTCTCGTCCCTTCTCAAGGCGTGTGCGAGTTCTAAGGCCTTGAAAGAAGGTATGGAGTTGCATTGTTTTGCTATTAAACTTGGACTGAATCATAATATTTACATATGCCCAACTCTCATAAATATGTATGCGGAGTGCAATGACATGAATGCAGCACGTGGAGTGTTTGATGAAATGGAGCAGCCATGTATTGTTAGCTATAATGCAATTATCACGGGTTATGCTCGAAGTAGTCAGCCCAACGAGGCTTTGTCGTTGTTTAGAGAATTGCAAGCAAGCAATCTTGAGCCTACTGATGTTACTATGCTTAGTGTAATTATGTCATGTGCTTTGTTGGGAGCACTAGACCTGGCAAGGTGGATTCATGAATATGTTAAGAAGAAAGGGTTTGATAAATATGTGAAGGTGAACACTGCACTTATAGATATGTTTGCAAAATGCGGAAGTCTAACTGATGCTATTTCTATCTTTGAGGGCATGCATGTGAGAGATACACAAGCTTGGTCTGCGATGATAGTTGCATTTGCAACTCATGGGGATGGCTTGAAAGCTATCTCAATGTTTGAAGAGATGAAGAGGGCAGGAGTTAGACCTGATGAGATCACTTTTTTGGGGCTTTTGTATGCTTGTAGTCATGCAGGGCTAGTAGAGCAAGGTAGAGGGTATTTCTATAGTATGTCTAAAAACTATGGAATAACTCCAGGGATCAAACATTATGGGTGTATGGTGGATTTGCTTGGTCGAACAGGTCGTTTAGACGAGGCTTATAACTTCATACATGAACTGGAAATTAAGCCCACACCTATACTCTGGCGCACCTTGTTATCTGCTTGCAGCACCCATGGTAATGTCGACATGGCAAAACGGGTTATTGACAGAATTTTTGAATTAGATGACTCCCATGGAGGGGACTATGTTATATTATCAAACTTGTGTGCTAGAGTGGGAAGATGGGAAGATGTGAATCATTTGAGGAAATTGATGAAAGATAGAGGGGTGGTAAAAGTTCCTGGGTGTAGTTCTGTGGAGGTAAACAATGTAGTACATGAGTTCTTCTCTGGAGATGGAGTTCACTGCATTTCGGTGGAGTTGCGCCGAGCACTTGATGAGTTAATCAAAGAAATAAAGTTGGTGGGATATGTTCCTGATACTTCTTTAGTATATCATGCTGATATGCAAGAGGAAGGGAAAGAACTTGTCCTGAGATATCATAGTGAAAAATTGGCCATGGCTTTTGGACTCCTAAATACACCTCCTGGTACAACAATAAGGGTAGTCAAGAATCTCCGGATTTGTGGAGATTGCCATAACACTGCAAAACTTATATCTTTAATTTTTGGGAGGCAAATCGTAATTAGAGACGTTCAACGATTCCATCAATTTGAAGATGGGAAATGCTCCTGTGTTACGTCCTCGTGA

Coding sequence (CDS)

ATGCCTATCTCCTGTATTCCAACTTGCCAATTCACTCTCACAAAACCAAGCTTCACCTTTTCCAAGAATGAGTTCATGAATCCACCCCACCCTCTTTCTCTTTTGTCCAAATGTACATCTCTCAGGGAGCTCAAGCAAATTCAAGCCTATACCATCAAAACCAATCTTCAGAATGACATCTCTATTCTCACTAAGCTCATTAATTTCTGCACACTCAACCCCACAATTTCGTCCATGGACCATGCCCACCATCTGTTCGATCAAATTCCTGACAAGGATATTGTCCTCTTTAACATAATGGCACGTGGTTATGCTCGCTCTAATTCTCCCTATCTTGCCTTTTCTCTTTTTGCTCAACTCCTGTGCTCTGGCCTTCTTCCTGATGACTACACATTCTCGTCCCTTCTCAAGGCGTGTGCGAGTTCTAAGGCCTTGAAAGAAGGTATGGAGTTGCATTGTTTTGCTATTAAACTTGGACTGAATCATAATATTTACATATGCCCAACTCTCATAAATATGTATGCGGAGTGCAATGACATGAATGCAGCACGTGGAGTGTTTGATGAAATGGAGCAGCCATGTATTGTTAGCTATAATGCAATTATCACGGGTTATGCTCGAAGTAGTCAGCCCAACGAGGCTTTGTCGTTGTTTAGAGAATTGCAAGCAAGCAATCTTGAGCCTACTGATGTTACTATGCTTAGTGTAATTATGTCATGTGCTTTGTTGGGAGCACTAGACCTGGCAAGGTGGATTCATGAATATGTTAAGAAGAAAGGGTTTGATAAATATGTGAAGGTGAACACTGCACTTATAGATATGTTTGCAAAATGCGGAAGTCTAACTGATGCTATTTCTATCTTTGAGGGCATGCATGTGAGAGATACACAAGCTTGGTCTGCGATGATAGTTGCATTTGCAACTCATGGGGATGGCTTGAAAGCTATCTCAATGTTTGAAGAGATGAAGAGGGCAGGAGTTAGACCTGATGAGATCACTTTTTTGGGGCTTTTGTATGCTTGTAGTCATGCAGGGCTAGTAGAGCAAGGTAGAGGGTATTTCTATAGTATGTCTAAAAACTATGGAATAACTCCAGGGATCAAACATTATGGGTGTATGGTGGATTTGCTTGGTCGAACAGGTCGTTTAGACGAGGCTTATAACTTCATACATGAACTGGAAATTAAGCCCACACCTATACTCTGGCGCACCTTGTTATCTGCTTGCAGCACCCATGGTAATGTCGACATGGCAAAACGGGTTATTGACAGAATTTTTGAATTAGATGACTCCCATGGAGGGGACTATGTTATATTATCAAACTTGTGTGCTAGAGTGGGAAGATGGGAAGATGTGAATCATTTGAGGAAATTGATGAAAGATAGAGGGGTGGTAAAAGTTCCTGGGTGTAGTTCTGTGGAGGTAAACAATGTAGTACATGAGTTCTTCTCTGGAGATGGAGTTCACTGCATTTCGGTGGAGTTGCGCCGAGCACTTGATGAGTTAATCAAAGAAATAAAGTTGGTGGGATATGTTCCTGATACTTCTTTAGTATATCATGCTGATATGCAAGAGGAAGGGAAAGAACTTGTCCTGAGATATCATAGTGAAAAATTGGCCATGGCTTTTGGACTCCTAAATACACCTCCTGGTACAACAATAAGGGTAGTCAAGAATCTCCGGATTTGTGGAGATTGCCATAACACTGCAAAACTTATATCTTTAATTTTTGGGAGGCAAATCGTAATTAGAGACGTTCAACGATTCCATCAATTTGAAGATGGGAAATGCTCCTGTGTTACGTCCTCGTGA

Protein sequence

MPISCIPTCQFTLTKPSFTFSKNEFMNPPHPLSLLSKCTSLRELKQIQAYTIKTNLQNDISILTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQLLCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSCALLGALDLARWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWSAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKNYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKRVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMQEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLISLIFGRQIVIRDVQRFHQFEDGKCSCVTSS
Homology
BLAST of Clc05G26590 vs. NCBI nr
Match: XP_038893049.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Benincasa hispida])

HSP 1 Score: 1161.4 bits (3003), Expect = 0.0e+00
Identity = 562/599 (93.82%), Postives = 580/599 (96.83%), Query Frame = 0

Query: 1   MPISCIPTCQFTLTKPSFTFSKNEFMNPPHPLSLLSKCTSLRELKQIQAYTIKTNLQNDI 60
           M +SCIPTCQFTLTKPS TFS NEF+N PHPLSLLSKCTSLRELKQIQAYTIKTNLQND+
Sbjct: 1   MTVSCIPTCQFTLTKPSSTFSNNEFINQPHPLSLLSKCTSLRELKQIQAYTIKTNLQNDV 60

Query: 61  SILTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQL 120
           S+LTKLIN CT NPT SSMD+AHHLFDQI DKDIVLFNIMARGYARSNSP LAFSLFA++
Sbjct: 61  SVLTKLINICTRNPTTSSMDYAHHLFDQISDKDIVLFNIMARGYARSNSPNLAFSLFAKV 120

Query: 121 LCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDM 180
           L SGLLPDDYTFSSLLKACASSKA K+GMELHCFAIKLGLNHNIYICPTLINMYAECNDM
Sbjct: 121 LSSGLLPDDYTFSSLLKACASSKAFKQGMELHCFAIKLGLNHNIYICPTLINMYAECNDM 180

Query: 181 NAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSC 240
           NAARGVFDE+EQPCIVSYNAIITGYARSSQPNEALSLFRELQAS+LEPTDVTMLS+IMSC
Sbjct: 181 NAARGVFDEIEQPCIVSYNAIITGYARSSQPNEALSLFRELQASHLEPTDVTMLSIIMSC 240

Query: 241 ALLGALDLARWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWS 300
           ALLGALDL RWIHEYVKKKGFDKYVKVNTALIDMFAKCGSL DAISIFEGM VRDTQAWS
Sbjct: 241 ALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLADAISIFEGMRVRDTQAWS 300

Query: 301 AMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKN 360
           AMIVAFATHGDGLKAISMFEEMKR GVRPDEITFLGLLYACSHAGLVEQGR YFY+MSKN
Sbjct: 301 AMIVAFATHGDGLKAISMFEEMKRTGVRPDEITFLGLLYACSHAGLVEQGREYFYNMSKN 360

Query: 361 YGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKR 420
           YGITPGIKHYGCMVDLLGRTGRLDEAYNFI ELEIKPTP+LWRTLLSACSTHGNVDMAKR
Sbjct: 361 YGITPGIKHYGCMVDLLGRTGRLDEAYNFIDELEIKPTPVLWRTLLSACSTHGNVDMAKR 420

Query: 421 VIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH 480
           V +RIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH
Sbjct: 421 VTERIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH 480

Query: 481 EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMQEEGKELVLRYHSEKLA 540
           EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADM+EEGKELVLRYHSEKLA
Sbjct: 481 EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLA 540

Query: 541 MAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLISLIFGRQIVIRDVQRFHQFEDGKCSC 600
           MAFGLLNTPPGTTIRVVKNLRICGDCHN AKLISLIFGRQI+IRDVQRFH+FE+GKCSC
Sbjct: 541 MAFGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIIIRDVQRFHRFENGKCSC 599

BLAST of Clc05G26590 vs. NCBI nr
Match: XP_008446357.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucumis melo] >KAA0034422.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK17712.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1154.4 bits (2985), Expect = 0.0e+00
Identity = 560/600 (93.33%), Postives = 581/600 (96.83%), Query Frame = 0

Query: 1   MPISCIPTCQFTLTKPSFTFSKNEF-MNPPHPLSLLSKCTSLRELKQIQAYTIKTNLQND 60
           M ISCIPTCQFTLTKPS TFSKNEF +N  HPLSLLSKCTSL+ELKQIQAYTIKTNLQ+D
Sbjct: 1   MAISCIPTCQFTLTKPSSTFSKNEFVINQLHPLSLLSKCTSLKELKQIQAYTIKTNLQSD 60

Query: 61  ISILTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQ 120
           IS+LTKLINFCTLNPT S MDHAHHLFDQI DKDI+LFNIMARGYARSNSPYLAFSLFAQ
Sbjct: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFAQ 120

Query: 121 LLCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECND 180
           LLCSGLLPDDYTFSSLLKACASSKAL++GM LHCFA+KLGLNHNIYICPTLINMYAECND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALRQGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180

Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMS 240
           MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQAS++EPTDVTMLSVIMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASDIEPTDVTMLSVIMS 240

Query: 241 CALLGALDLARWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAW 300
           CALLGALDL +WIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGM VRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300

Query: 301 SAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
           SAMIVAFATHGDGLK+IS+FEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMS+
Sbjct: 301 SAMIVAFATHGDGLKSISIFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSR 360

Query: 361 NYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAK 420
            YGITPGIKHYGCMVDLLGRTG LDEAYNF+ ELEIKPTPILWRTLLSACSTHGNV+MAK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRTGCLDEAYNFVDELEIKPTPILWRTLLSACSTHGNVEMAK 420

Query: 421 RVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
           RVI+RIFELDDSHGGDYVILSNL ARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDSHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480

Query: 481 HEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMQEEGKELVLRYHSEKL 540
           HEFFSGDGVHC+SVELRRALDEL+KEIKLVGY+PDTSLVYHADM EEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYIPDTSLVYHADMDEEGKELVLRYHSEKL 540

Query: 541 AMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLISLIFGRQIVIRDVQRFHQFEDGKCSC 600
           AMAFGLLNTPPGTTIRV KNLRICGDCHN AKLIS IFGR+IVIRDVQRFHQFEDGKCSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHQFEDGKCSC 600

BLAST of Clc05G26590 vs. NCBI nr
Match: XP_031742214.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucumis sativus])

HSP 1 Score: 1147.1 bits (2966), Expect = 0.0e+00
Identity = 557/600 (92.83%), Postives = 576/600 (96.00%), Query Frame = 0

Query: 1   MPISCIPTCQFTLTKPSFTFSKNEF-MNPPHPLSLLSKCTSLRELKQIQAYTIKTNLQND 60
           M ISCIPTCQFTLTKPS  FSKNEF +N  HPLSLLSKCTSL ELKQIQAYTIKTNLQ+D
Sbjct: 1   MAISCIPTCQFTLTKPSSAFSKNEFVINQLHPLSLLSKCTSLNELKQIQAYTIKTNLQSD 60

Query: 61  ISILTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQ 120
           IS+LTKLINFCTLNPT S MDHAHHLFDQI DKDI+LFNIMARGYARSNSPYLAFSLF +
Sbjct: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGE 120

Query: 121 LLCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECND 180
           LLCSGLLPDDYTFSSLLKACASSKAL+EGM LHCFA+KLGLNHNIYICPTLINMYAECND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180

Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMS 240
           MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASN+EPTDVTMLSVIMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240

Query: 241 CALLGALDLARWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAW 300
           CALLGALDL +WIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGM VRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300

Query: 301 SAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
           SAMIVAFATHGDGLKAISMFEEMKR GVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK
Sbjct: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360

Query: 361 NYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAK 420
            YGITPGIKHYGCMVDLLGR G LDEAYNF+ +LEIK TPILWRTLLSACSTHGNV+MAK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAK 420

Query: 421 RVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
           RVI+RIFELDD+HGGDYVILSNL ARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480

Query: 481 HEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMQEEGKELVLRYHSEKL 540
           HEFFSGDGVHC+SVELRRALDEL+KEIKLVGYVPDTSLVYHADM+EEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540

Query: 541 AMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLISLIFGRQIVIRDVQRFHQFEDGKCSC 600
           AMAFGLLNTPPGTTIRV KNLRICGDCHN AKLIS IFGR+IVIRDVQRFH+FEDGKCSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600

BLAST of Clc05G26590 vs. NCBI nr
Match: XP_022151060.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 1123.2 bits (2904), Expect = 0.0e+00
Identity = 542/599 (90.48%), Postives = 567/599 (94.66%), Query Frame = 0

Query: 1   MPISCIPTCQFTLTKPSFTFSKNEFMNPPHPLSLLSKCTSLRELKQIQAYTIKTNLQNDI 60
           M ISCIP+CQFTL KP+  F  NEF NPPHPL LLSKCTSLRELKQIQA+TIKTNLQNDI
Sbjct: 1   MGISCIPSCQFTLAKPNSAFPNNEFTNPPHPLFLLSKCTSLRELKQIQAFTIKTNLQNDI 60

Query: 61  SILTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQL 120
           S+LTK+INFCTLNP+ SSMDHAHHLFDQIPDKDIVLFNIMARGYARSN+PYLAFSLF+Q+
Sbjct: 61  SVLTKIINFCTLNPSTSSMDHAHHLFDQIPDKDIVLFNIMARGYARSNTPYLAFSLFSQV 120

Query: 121 LCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDM 180
           LCSGLLPDDYTFSSLLKACASSKA  EG +LHCFAIKLGLNHNIYICP+LIN+YAECNDM
Sbjct: 121 LCSGLLPDDYTFSSLLKACASSKAFSEGRQLHCFAIKLGLNHNIYICPSLINLYAECNDM 180

Query: 181 NAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSC 240
           NAARGVFDEME PCIVSYNAIITG+ARSSQPNEALSLFRELQASNLEPTDVTMLS+IMSC
Sbjct: 181 NAARGVFDEMEAPCIVSYNAIITGHARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSC 240

Query: 241 ALLGALDLARWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWS 300
           ALLGALDL RWIHEYVKKKGFDK+VKVNTALIDM+AKCGSL DAISIFE M VRDTQAWS
Sbjct: 241 ALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSLVDAISIFEDMRVRDTQAWS 300

Query: 301 AMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKN 360
           AMIVA+ATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVE+GRGYF SMSK 
Sbjct: 301 AMIVAYATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEEGRGYFNSMSKY 360

Query: 361 YGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKR 420
           YGI PGIKHYGCMVDLLGRTG LDEAY FI   EIKPTPILWRTLLSACS  GNVD+AKR
Sbjct: 361 YGIAPGIKHYGCMVDLLGRTGHLDEAYKFIDGSEIKPTPILWRTLLSACSNRGNVDLAKR 420

Query: 421 VIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH 480
           VI+RIFELDDSHGGDYVILSNLCARVGRWEDVNH+RKLMKDRGVVKVPGCSSVEVNNVVH
Sbjct: 421 VIERIFELDDSHGGDYVILSNLCARVGRWEDVNHIRKLMKDRGVVKVPGCSSVEVNNVVH 480

Query: 481 EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMQEEGKELVLRYHSEKLA 540
           EFFSGDGVH ISVELRRALDELIKEIKLVGYVPDTSLVYHADM+EEGKELVLRYHSEKLA
Sbjct: 481 EFFSGDGVHSISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLA 540

Query: 541 MAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLISLIFGRQIVIRDVQRFHQFEDGKCSC 600
           +AFGLLN+PPGT IRVVKNLRICGDCH  AKLIS IFGRQIVIRDVQRFH+FEDGKCSC
Sbjct: 541 IAFGLLNSPPGTPIRVVKNLRICGDCHTAAKLISFIFGRQIVIRDVQRFHRFEDGKCSC 599

BLAST of Clc05G26590 vs. NCBI nr
Match: XP_023541252.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1120.1 bits (2896), Expect = 0.0e+00
Identity = 544/599 (90.82%), Postives = 567/599 (94.66%), Query Frame = 0

Query: 1   MPISCIPTCQFTLTKPSFTFSKNEFMNPPHPLSLLSKCTSLRELKQIQAYTIKTNLQNDI 60
           M ISCIPT QF L+KP     KNEF+N PHPLSL SKC+SLRELKQIQAYTIKTNL NDI
Sbjct: 1   MAISCIPTSQFALSKP-----KNEFINQPHPLSLFSKCSSLRELKQIQAYTIKTNLHNDI 60

Query: 61  SILTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQL 120
           S+LTKLINFCT NPTISSMDHAHHLFD++ DKDIVLFNIMARGYARSNSPYL FSLFAQ+
Sbjct: 61  SVLTKLINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQV 120

Query: 121 LCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDM 180
           LCSGLLPDDYTFSSLLKACA SKAL+EG +LHCFAIKLGL HNIYICPTLINMYA CNDM
Sbjct: 121 LCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACNDM 180

Query: 181 NAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSC 240
           NAARGVFD ME+PCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLS+IMSC
Sbjct: 181 NAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSC 240

Query: 241 ALLGALDLARWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWS 300
           ALLGALDL RWIHEYVKKKGFDK+VKVNTALIDM+AKCGS+ DAISIFEGM VRDTQAWS
Sbjct: 241 ALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWS 300

Query: 301 AMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKN 360
           AMIVAFATHGDGLKAISMFEEMK+AGVRPDEITFLGLLYACSHAGLVE+GRGYFYSM KN
Sbjct: 301 AMIVAFATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVEEGRGYFYSMYKN 360

Query: 361 YGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKR 420
           +GITPGIKHYGCMVDLLGRTGRLDEAY FI EL IKPTPILWRTLLSACS HGNVD+AKR
Sbjct: 361 HGITPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKR 420

Query: 421 VIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH 480
           VI+RIFELDDSHGGDYVILSNLCAR+GRWEDVN LRKLMKDRGVVKVPGCSSVEVNNVVH
Sbjct: 421 VIERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVVKVPGCSSVEVNNVVH 480

Query: 481 EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMQEEGKELVLRYHSEKLA 540
           EFFSGDGVH ISVELRRALDELIKEIKL GYVPDTSLVYHADM+EE KELVLRYHSEKLA
Sbjct: 481 EFFSGDGVHSISVELRRALDELIKEIKLAGYVPDTSLVYHADMEEEAKELVLRYHSEKLA 540

Query: 541 MAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLISLIFGRQIVIRDVQRFHQFEDGKCSC 600
           MAFGLLNTPPGTTIRVVKNLRICGDCHN AKLISLIFGRQIVIRDVQRFH+FEDG+CSC
Sbjct: 541 MAFGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSC 594

BLAST of Clc05G26590 vs. ExPASy Swiss-Prot
Match: Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)

HSP 1 Score: 822.0 bits (2122), Expect = 4.4e-237
Identity = 386/579 (66.67%), Postives = 474/579 (81.87%), Query Frame = 0

Query: 21  SKNEFMNPPHPLSLLSKCTSLRELKQIQAYTIKTNLQNDISILTKLINFCTLNPTISSMD 80
           SK + +N  +P+ L+SKC SLREL QIQAY IK++++ D+S + KLINFCT +PT SSM 
Sbjct: 22  SKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMS 81

Query: 81  HAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQLLCSGLLPDDYTFSSLLKACA 140
           +A HLF+ + + DIV+FN MARGY+R  +P   FSLF ++L  G+LPD+YTF SLLKACA
Sbjct: 82  YARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACA 141

Query: 141 SSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNA 200
            +KAL+EG +LHC ++KLGL+ N+Y+CPTLINMY EC D+++AR VFD + +PC+V YNA
Sbjct: 142 VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNA 201

Query: 201 IITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSCALLGALDLARWIHEYVKKKG 260
           +ITGYAR ++PNEALSLFRE+Q   L+P ++T+LSV+ SCALLG+LDL +WIH+Y KK  
Sbjct: 202 MITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS 261

Query: 261 FDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWSAMIVAFATHGDGLKAISMFE 320
           F KYVKVNTALIDMFAKCGSL DA+SIFE M  +DTQAWSAMIVA+A HG   K++ MFE
Sbjct: 262 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFE 321

Query: 321 EMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKNYGITPGIKHYGCMVDLLGRT 380
            M+   V+PDEITFLGLL ACSH G VE+GR YF  M   +GI P IKHYG MVDLL R 
Sbjct: 322 RMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRA 381

Query: 381 GRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKRVIDRIFELDDSHGGDYVILS 440
           G L++AY FI +L I PTP+LWR LL+ACS+H N+D+A++V +RIFELDDSHGGDYVILS
Sbjct: 382 GNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILS 441

Query: 441 NLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCISVELRRALD 500
           NL AR  +WE V+ LRK+MKDR  VKVPGCSS+EVNNVVHEFFSGDGV   + +L RALD
Sbjct: 442 NLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALD 501

Query: 501 ELIKEIKLVGYVPDTSLVYHADMQEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNL 560
           E++KE+KL GYVPDTS+V HA+M ++ KE+ LRYHSEKLA+ FGLLNTPPGTTIRVVKNL
Sbjct: 502 EMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNL 561

Query: 561 RICGDCHNTAKLISLIFGRQIVIRDVQRFHQFEDGKCSC 600
           R+C DCHN AKLISLIFGR++V+RDVQRFH FEDGKCSC
Sbjct: 562 RVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSC 599

BLAST of Clc05G26590 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 1.7e-135
Identity = 235/601 (39.10%), Postives = 366/601 (60.90%), Query Frame = 0

Query: 29  PHPLSLLSKCTSLRELKQIQAYTIKTNLQNDISILTKLINFCTLNPTISS---------- 88
           P  L   +K  + +E +QI  + +K     D+ + T LI+    N  +            
Sbjct: 138 PFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH 197

Query: 89  ------------------MDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQL 148
                             +++A  LFD+IP KD+V +N M  GYA + +   A  LF  +
Sbjct: 198 RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257

Query: 149 LCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDM 208
           + + + PD+ T  +++ ACA S +++ G ++H +    G   N+ I   LI++Y++C ++
Sbjct: 258 MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL 317

Query: 209 NAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSC 268
             A G+F+ +    ++S+N +I GY   +   EAL LF+E+  S   P DVTMLS++ +C
Sbjct: 318 ETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC 377

Query: 269 ALLGALDLARWIHEYVKK--KGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQA 328
           A LGA+D+ RWIH Y+ K  KG      + T+LIDM+AKCG +  A  +F  +  +   +
Sbjct: 378 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS 437

Query: 329 WSAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMS 388
           W+AMI  FA HG    +  +F  M++ G++PD+ITF+GLL ACSH+G+++ GR  F +M+
Sbjct: 438 WNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT 497

Query: 389 KNYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMA 448
           ++Y +TP ++HYGCM+DLLG +G   EA   I+ +E++P  ++W +LL AC  HGNV++ 
Sbjct: 498 QDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELG 557

Query: 449 KRVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNV 508
           +   + + +++  + G YV+LSN+ A  GRW +V   R L+ D+G+ KVPGCSS+E+++V
Sbjct: 558 ESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSV 617

Query: 509 VHEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMQEEGKELVLRYHSEK 568
           VHEF  GD  H  + E+   L+E+   ++  G+VPDTS V   +M+EE KE  LR+HSEK
Sbjct: 618 VHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQ-EMEEEWKEGALRHHSEK 677

Query: 569 LAMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLISLIFGRQIVIRDVQRFHQFEDGKCS 600
           LA+AFGL++T PGT + +VKNLR+C +CH   KLIS I+ R+I+ RD  RFH F DG CS
Sbjct: 678 LAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCS 737

BLAST of Clc05G26590 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 2.8e-135
Identity = 232/599 (38.73%), Postives = 360/599 (60.10%), Query Frame = 0

Query: 32  LSLLSKCTSLRELKQIQAYTIKTNLQNDISILTKLINFCTLNPTISSMDHAHHLFDQIPD 91
           +S L +C+   ELKQI A  +KT L  D   +TK ++FC  + +   + +A  +FD    
Sbjct: 18  MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77

Query: 92  KDIVLFNIMARGYARSNSPYLAFSLFAQLLCSGLLPDDYTFSSLLKACASSKALKEGMEL 151
            D  L+N+M RG++ S+ P  +  L+ ++LCS    + YTF SLLKAC++  A +E  ++
Sbjct: 78  PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137

Query: 152 HCFAIKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQP 211
           H    KLG  +++Y   +LIN YA   +   A  +FD + +P  VS+N++I GY ++ + 
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197

Query: 212 N-------------------------------EALSLFRELQASNLEPTDVTMLSVIMSC 271
           +                               EAL LF E+Q S++EP +V++ + + +C
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257

Query: 272 ALLGALDLARWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWS 331
           A LGAL+  +WIH Y+ K        +   LIDM+AKCG + +A+ +F+ +  +  QAW+
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317

Query: 332 AMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKN 391
           A+I  +A HG G +AIS F EM++ G++P+ ITF  +L ACS+ GLVE+G+  FYSM ++
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 377

Query: 392 YGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKR 451
           Y + P I+HYGC+VDLLGR G LDEA  FI E+ +KP  ++W  LL AC  H N+++ + 
Sbjct: 378 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 437

Query: 452 VIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH 511
           + + +  +D  HGG YV  +N+ A   +W+     R+LMK++GV KVPGCS++ +    H
Sbjct: 438 IGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTH 497

Query: 512 EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMQEEGKELVLRYHSEKLA 571
           EF +GD  H    +++     + ++++  GYVP+   +    + ++ +E ++  HSEKLA
Sbjct: 498 EFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLA 557

Query: 572 MAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLISLIFGRQIVIRDVQRFHQFEDGKCSC 600
           + +GL+ T PGT IR++KNLR+C DCH   KLIS I+ R IV+RD  RFH F DGKCSC
Sbjct: 558 ITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSC 616

BLAST of Clc05G26590 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 5.9e-133
Identity = 235/571 (41.16%), Postives = 364/571 (63.75%), Query Frame = 0

Query: 32  LSLLSKCTSLREL---KQIQAYTIKTNLQNDISILTKLINFCTLNPTISSMDHAHHLFDQ 91
           +S+L   ++LR +   K+I  Y +++   + ++I T L++   +     S++ A  LFD 
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD---MYAKCGSLETARQLFDG 299

Query: 92  IPDKDIVLFNIMARGYARSNSPYLAFSLFAQLLCSGLLPDDYTFSSLLKACASSKALKEG 151
           + ++++V +N M   Y ++ +P  A  +F ++L  G+ P D +    L ACA    L+ G
Sbjct: 300 MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 359

Query: 152 MELHCFAIKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARS 211
             +H  +++LGL+ N+ +  +LI+MY +C +++ A  +F +++   +VS+NA+I G+A++
Sbjct: 360 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQN 419

Query: 212 SQPNEALSLFRELQASNLEPTDVTMLSVIMSCALLGALDLARWIHEYVKKKGFDKYVKVN 271
            +P +AL+ F ++++  ++P   T +SVI + A L     A+WIH  V +   DK V V 
Sbjct: 420 GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT 479

Query: 272 TALIDMFAKCGSLTDAISIFEGMHVRDTQAWSAMIVAFATHGDGLKAISMFEEMKRAGVR 331
           TAL+DM+AKCG++  A  IF+ M  R    W+AMI  + THG G  A+ +FEEM++  ++
Sbjct: 480 TALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIK 539

Query: 332 PDEITFLGLLYACSHAGLVEQGRGYFYSMSKNYGITPGIKHYGCMVDLLGRTGRLDEAYN 391
           P+ +TFL ++ ACSH+GLVE G   FY M +NY I   + HYG MVDLLGR GRL+EA++
Sbjct: 540 PNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWD 599

Query: 392 FIHELEIKPTPILWRTLLSACSTHGNVDMAKRVIDRIFELDDSHGGDYVILSNLCARVGR 451
           FI ++ +KP   ++  +L AC  H NV+ A++  +R+FEL+   GG +V+L+N+      
Sbjct: 600 FIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASM 659

Query: 452 WEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCISVELRRALDELIKEIKL 511
           WE V  +R  M  +G+ K PGCS VE+ N VH FFSG   H  S ++   L++LI  IK 
Sbjct: 660 WEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKE 719

Query: 512 VGYVPDTSLVYHADMQEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLRICGDCHN 571
            GYVPDT+LV    ++ + KE +L  HSEKLA++FGLLNT  GTTI V KNLR+C DCHN
Sbjct: 720 AGYVPDTNLV--LGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHN 779

Query: 572 TAKLISLIFGRQIVIRDVQRFHQFEDGKCSC 600
             K ISL+ GR+IV+RD+QRFH F++G CSC
Sbjct: 780 ATKYISLVTGREIVVRDMQRFHHFKNGACSC 805

BLAST of Clc05G26590 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 1.5e-131
Identity = 241/623 (38.68%), Postives = 369/623 (59.23%), Query Frame = 0

Query: 30  HPLSL---LSKCTSLRELKQIQAYTIKTNLQNDISILTKLINFC-TLNPTISSMDHAHHL 89
           HP SL   ++ C ++R+L QI A  IK+    D     +++ FC T +     +D+AH +
Sbjct: 22  HPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKI 81

Query: 90  FDQIPDKDIVLFNIMARGYARS--NSPYLAFSLFAQLLCSGLL-PDDYTFSSLLKACASS 149
           F+Q+P ++   +N + RG++ S  +   +A +LF +++    + P+ +TF S+LKACA +
Sbjct: 82  FNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKT 141

Query: 150 KALKEGMELHCFAIKLGLNHNIYICPTLINMYAEC------------------------- 209
             ++EG ++H  A+K G   + ++   L+ MY  C                         
Sbjct: 142 GKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDR 201

Query: 210 --------------------NDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSL 269
                                D  AAR +FD+M Q  +VS+N +I+GY+ +    +A+ +
Sbjct: 202 RKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEV 261

Query: 270 FRELQASNLEPTDVTMLSVIMSCALLGALDLARWIHEYVKKKGFDKYVKVNTALIDMFAK 329
           FRE++  ++ P  VT++SV+ + + LG+L+L  W+H Y +  G      + +ALIDM++K
Sbjct: 262 FREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSK 321

Query: 330 CGSLTDAISIFEGMHVRDTQAWSAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGL 389
           CG +  AI +FE +   +   WSAMI  FA HG    AI  F +M++AGVRP ++ ++ L
Sbjct: 322 CGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINL 381

Query: 390 LYACSHAGLVEQGRGYFYSMSKNYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKP 449
           L ACSH GLVE+GR YF  M    G+ P I+HYGCMVDLLGR+G LDEA  FI  + IKP
Sbjct: 382 LTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKP 441

Query: 450 TPILWRTLLSACSTHGNVDMAKRVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRK 509
             ++W+ LL AC   GNV+M KRV + + ++     G YV LSN+ A  G W +V+ +R 
Sbjct: 442 DDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRL 501

Query: 510 LMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSL 569
            MK++ + K PGCS ++++ V+HEF   D  H  + E+   L E+  +++L GY P T+ 
Sbjct: 502 RMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQ 561

Query: 570 VYHADMQEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLISLIF 601
           V   +++EE KE VL YHSEK+A AFGL++T PG  IR+VKNLRIC DCH++ KLIS ++
Sbjct: 562 VL-LNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVY 621

BLAST of Clc05G26590 vs. ExPASy TrEMBL
Match: A0A5A7STH8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00400 PE=3 SV=1)

HSP 1 Score: 1154.4 bits (2985), Expect = 0.0e+00
Identity = 560/600 (93.33%), Postives = 581/600 (96.83%), Query Frame = 0

Query: 1   MPISCIPTCQFTLTKPSFTFSKNEF-MNPPHPLSLLSKCTSLRELKQIQAYTIKTNLQND 60
           M ISCIPTCQFTLTKPS TFSKNEF +N  HPLSLLSKCTSL+ELKQIQAYTIKTNLQ+D
Sbjct: 1   MAISCIPTCQFTLTKPSSTFSKNEFVINQLHPLSLLSKCTSLKELKQIQAYTIKTNLQSD 60

Query: 61  ISILTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQ 120
           IS+LTKLINFCTLNPT S MDHAHHLFDQI DKDI+LFNIMARGYARSNSPYLAFSLFAQ
Sbjct: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFAQ 120

Query: 121 LLCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECND 180
           LLCSGLLPDDYTFSSLLKACASSKAL++GM LHCFA+KLGLNHNIYICPTLINMYAECND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALRQGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180

Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMS 240
           MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQAS++EPTDVTMLSVIMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASDIEPTDVTMLSVIMS 240

Query: 241 CALLGALDLARWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAW 300
           CALLGALDL +WIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGM VRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300

Query: 301 SAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
           SAMIVAFATHGDGLK+IS+FEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMS+
Sbjct: 301 SAMIVAFATHGDGLKSISIFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSR 360

Query: 361 NYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAK 420
            YGITPGIKHYGCMVDLLGRTG LDEAYNF+ ELEIKPTPILWRTLLSACSTHGNV+MAK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRTGCLDEAYNFVDELEIKPTPILWRTLLSACSTHGNVEMAK 420

Query: 421 RVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
           RVI+RIFELDDSHGGDYVILSNL ARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDSHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480

Query: 481 HEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMQEEGKELVLRYHSEKL 540
           HEFFSGDGVHC+SVELRRALDEL+KEIKLVGY+PDTSLVYHADM EEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYIPDTSLVYHADMDEEGKELVLRYHSEKL 540

Query: 541 AMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLISLIFGRQIVIRDVQRFHQFEDGKCSC 600
           AMAFGLLNTPPGTTIRV KNLRICGDCHN AKLIS IFGR+IVIRDVQRFHQFEDGKCSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHQFEDGKCSC 600

BLAST of Clc05G26590 vs. ExPASy TrEMBL
Match: A0A1S3BFK0 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489124 PE=3 SV=1)

HSP 1 Score: 1154.4 bits (2985), Expect = 0.0e+00
Identity = 560/600 (93.33%), Postives = 581/600 (96.83%), Query Frame = 0

Query: 1   MPISCIPTCQFTLTKPSFTFSKNEF-MNPPHPLSLLSKCTSLRELKQIQAYTIKTNLQND 60
           M ISCIPTCQFTLTKPS TFSKNEF +N  HPLSLLSKCTSL+ELKQIQAYTIKTNLQ+D
Sbjct: 1   MAISCIPTCQFTLTKPSSTFSKNEFVINQLHPLSLLSKCTSLKELKQIQAYTIKTNLQSD 60

Query: 61  ISILTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQ 120
           IS+LTKLINFCTLNPT S MDHAHHLFDQI DKDI+LFNIMARGYARSNSPYLAFSLFAQ
Sbjct: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFAQ 120

Query: 121 LLCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECND 180
           LLCSGLLPDDYTFSSLLKACASSKAL++GM LHCFA+KLGLNHNIYICPTLINMYAECND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALRQGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180

Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMS 240
           MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQAS++EPTDVTMLSVIMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASDIEPTDVTMLSVIMS 240

Query: 241 CALLGALDLARWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAW 300
           CALLGALDL +WIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGM VRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300

Query: 301 SAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
           SAMIVAFATHGDGLK+IS+FEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMS+
Sbjct: 301 SAMIVAFATHGDGLKSISIFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSR 360

Query: 361 NYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAK 420
            YGITPGIKHYGCMVDLLGRTG LDEAYNF+ ELEIKPTPILWRTLLSACSTHGNV+MAK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRTGCLDEAYNFVDELEIKPTPILWRTLLSACSTHGNVEMAK 420

Query: 421 RVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
           RVI+RIFELDDSHGGDYVILSNL ARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDSHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480

Query: 481 HEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMQEEGKELVLRYHSEKL 540
           HEFFSGDGVHC+SVELRRALDEL+KEIKLVGY+PDTSLVYHADM EEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYIPDTSLVYHADMDEEGKELVLRYHSEKL 540

Query: 541 AMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLISLIFGRQIVIRDVQRFHQFEDGKCSC 600
           AMAFGLLNTPPGTTIRV KNLRICGDCHN AKLIS IFGR+IVIRDVQRFHQFEDGKCSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHQFEDGKCSC 600

BLAST of Clc05G26590 vs. ExPASy TrEMBL
Match: A0A0A0KU15 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605160 PE=3 SV=1)

HSP 1 Score: 1147.1 bits (2966), Expect = 0.0e+00
Identity = 557/600 (92.83%), Postives = 576/600 (96.00%), Query Frame = 0

Query: 1   MPISCIPTCQFTLTKPSFTFSKNEF-MNPPHPLSLLSKCTSLRELKQIQAYTIKTNLQND 60
           M ISCIPTCQFTLTKPS  FSKNEF +N  HPLSLLSKCTSL ELKQIQAYTIKTNLQ+D
Sbjct: 1   MAISCIPTCQFTLTKPSSAFSKNEFVINQLHPLSLLSKCTSLNELKQIQAYTIKTNLQSD 60

Query: 61  ISILTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQ 120
           IS+LTKLINFCTLNPT S MDHAHHLFDQI DKDI+LFNIMARGYARSNSPYLAFSLF +
Sbjct: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGE 120

Query: 121 LLCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECND 180
           LLCSGLLPDDYTFSSLLKACASSKAL+EGM LHCFA+KLGLNHNIYICPTLINMYAECND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180

Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMS 240
           MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASN+EPTDVTMLSVIMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240

Query: 241 CALLGALDLARWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAW 300
           CALLGALDL +WIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGM VRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300

Query: 301 SAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
           SAMIVAFATHGDGLKAISMFEEMKR GVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK
Sbjct: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360

Query: 361 NYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAK 420
            YGITPGIKHYGCMVDLLGR G LDEAYNF+ +LEIK TPILWRTLLSACSTHGNV+MAK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAK 420

Query: 421 RVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480
           RVI+RIFELDD+HGGDYVILSNL ARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480

Query: 481 HEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMQEEGKELVLRYHSEKL 540
           HEFFSGDGVHC+SVELRRALDEL+KEIKLVGYVPDTSLVYHADM+EEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540

Query: 541 AMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLISLIFGRQIVIRDVQRFHQFEDGKCSC 600
           AMAFGLLNTPPGTTIRV KNLRICGDCHN AKLIS IFGR+IVIRDVQRFH+FEDGKCSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600

BLAST of Clc05G26590 vs. ExPASy TrEMBL
Match: A0A6J1DA68 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019083 PE=3 SV=1)

HSP 1 Score: 1123.2 bits (2904), Expect = 0.0e+00
Identity = 542/599 (90.48%), Postives = 567/599 (94.66%), Query Frame = 0

Query: 1   MPISCIPTCQFTLTKPSFTFSKNEFMNPPHPLSLLSKCTSLRELKQIQAYTIKTNLQNDI 60
           M ISCIP+CQFTL KP+  F  NEF NPPHPL LLSKCTSLRELKQIQA+TIKTNLQNDI
Sbjct: 1   MGISCIPSCQFTLAKPNSAFPNNEFTNPPHPLFLLSKCTSLRELKQIQAFTIKTNLQNDI 60

Query: 61  SILTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQL 120
           S+LTK+INFCTLNP+ SSMDHAHHLFDQIPDKDIVLFNIMARGYARSN+PYLAFSLF+Q+
Sbjct: 61  SVLTKIINFCTLNPSTSSMDHAHHLFDQIPDKDIVLFNIMARGYARSNTPYLAFSLFSQV 120

Query: 121 LCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDM 180
           LCSGLLPDDYTFSSLLKACASSKA  EG +LHCFAIKLGLNHNIYICP+LIN+YAECNDM
Sbjct: 121 LCSGLLPDDYTFSSLLKACASSKAFSEGRQLHCFAIKLGLNHNIYICPSLINLYAECNDM 180

Query: 181 NAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSC 240
           NAARGVFDEME PCIVSYNAIITG+ARSSQPNEALSLFRELQASNLEPTDVTMLS+IMSC
Sbjct: 181 NAARGVFDEMEAPCIVSYNAIITGHARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSC 240

Query: 241 ALLGALDLARWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWS 300
           ALLGALDL RWIHEYVKKKGFDK+VKVNTALIDM+AKCGSL DAISIFE M VRDTQAWS
Sbjct: 241 ALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSLVDAISIFEDMRVRDTQAWS 300

Query: 301 AMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKN 360
           AMIVA+ATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVE+GRGYF SMSK 
Sbjct: 301 AMIVAYATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEEGRGYFNSMSKY 360

Query: 361 YGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKR 420
           YGI PGIKHYGCMVDLLGRTG LDEAY FI   EIKPTPILWRTLLSACS  GNVD+AKR
Sbjct: 361 YGIAPGIKHYGCMVDLLGRTGHLDEAYKFIDGSEIKPTPILWRTLLSACSNRGNVDLAKR 420

Query: 421 VIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH 480
           VI+RIFELDDSHGGDYVILSNLCARVGRWEDVNH+RKLMKDRGVVKVPGCSSVEVNNVVH
Sbjct: 421 VIERIFELDDSHGGDYVILSNLCARVGRWEDVNHIRKLMKDRGVVKVPGCSSVEVNNVVH 480

Query: 481 EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMQEEGKELVLRYHSEKLA 540
           EFFSGDGVH ISVELRRALDELIKEIKLVGYVPDTSLVYHADM+EEGKELVLRYHSEKLA
Sbjct: 481 EFFSGDGVHSISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLA 540

Query: 541 MAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLISLIFGRQIVIRDVQRFHQFEDGKCSC 600
           +AFGLLN+PPGT IRVVKNLRICGDCH  AKLIS IFGRQIVIRDVQRFH+FEDGKCSC
Sbjct: 541 IAFGLLNSPPGTPIRVVKNLRICGDCHTAAKLISFIFGRQIVIRDVQRFHRFEDGKCSC 599

BLAST of Clc05G26590 vs. ExPASy TrEMBL
Match: A0A6J1HTT7 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467412 PE=3 SV=1)

HSP 1 Score: 1114.8 bits (2882), Expect = 0.0e+00
Identity = 540/599 (90.15%), Postives = 564/599 (94.16%), Query Frame = 0

Query: 1   MPISCIPTCQFTLTKPSFTFSKNEFMNPPHPLSLLSKCTSLRELKQIQAYTIKTNLQNDI 60
           M ISCIPTCQF LTKP     KNEF+N PHPLSL SKC SLRELKQIQAYTIKTNL NDI
Sbjct: 1   MAISCIPTCQFALTKP-----KNEFINQPHPLSLFSKCASLRELKQIQAYTIKTNLHNDI 60

Query: 61  SILTKLINFCTLNPTISSMDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQL 120
           S+LTKLINFCT  PT SSMDHAHHLFD++ DKDIVLFNIMARGYARSNSPYL FSLFAQ+
Sbjct: 61  SVLTKLINFCTRYPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQV 120

Query: 121 LCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDM 180
           LCSGLLPDDYTFSSLLKACA SKAL+EG +LHCFAIKLG  HNIYICPTLINMYA CNDM
Sbjct: 121 LCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGFGHNIYICPTLINMYAACNDM 180

Query: 181 NAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSC 240
           NAARGVFD ME+PCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLS+IMSC
Sbjct: 181 NAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMSC 240

Query: 241 ALLGALDLARWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWS 300
           ALLGALDL RWIHEYVKKKGFDK+VKVNTALIDM+AKCGS+ DAISIFEGM VRDTQAWS
Sbjct: 241 ALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAWS 300

Query: 301 AMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKN 360
           AMIVA+ATHGDGLKAISMFEEMK+AGVRPDEITFLGLLYACSHAGLVE+GRGYFYSM KN
Sbjct: 301 AMIVAYATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVEEGRGYFYSMYKN 360

Query: 361 YGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKR 420
           +G+TPGIKHYGCMVDLLGRTGRLDEAY FI EL IKPTPILWRTLLSACS HGNVD+AKR
Sbjct: 361 HGMTPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAKR 420

Query: 421 VIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH 480
           VI+RIFELDDSHGGDYVILSNLCAR+GRWEDVN LRKLMKDRGVVKVPGCSSVEVNNVVH
Sbjct: 421 VIERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVVKVPGCSSVEVNNVVH 480

Query: 481 EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMQEEGKELVLRYHSEKLA 540
           EFFSGDGVH ISVELRRALDELI+EIKL GYVPDTSLVYHADM+EE KELVLRYHSEKLA
Sbjct: 481 EFFSGDGVHSISVELRRALDELIQEIKLAGYVPDTSLVYHADMEEEAKELVLRYHSEKLA 540

Query: 541 MAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLISLIFGRQIVIRDVQRFHQFEDGKCSC 600
           MAFGLLNTPPGTTIRVVKNLRICGDCHN AKLISLIFGRQIVIRDVQRFH+FEDG+CSC
Sbjct: 541 MAFGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSC 594

BLAST of Clc05G26590 vs. TAIR 10
Match: AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 822.0 bits (2122), Expect = 3.1e-238
Identity = 386/579 (66.67%), Postives = 474/579 (81.87%), Query Frame = 0

Query: 21  SKNEFMNPPHPLSLLSKCTSLRELKQIQAYTIKTNLQNDISILTKLINFCTLNPTISSMD 80
           SK + +N  +P+ L+SKC SLREL QIQAY IK++++ D+S + KLINFCT +PT SSM 
Sbjct: 22  SKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMS 81

Query: 81  HAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQLLCSGLLPDDYTFSSLLKACA 140
           +A HLF+ + + DIV+FN MARGY+R  +P   FSLF ++L  G+LPD+YTF SLLKACA
Sbjct: 82  YARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACA 141

Query: 141 SSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNA 200
            +KAL+EG +LHC ++KLGL+ N+Y+CPTLINMY EC D+++AR VFD + +PC+V YNA
Sbjct: 142 VAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNA 201

Query: 201 IITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSCALLGALDLARWIHEYVKKKG 260
           +ITGYAR ++PNEALSLFRE+Q   L+P ++T+LSV+ SCALLG+LDL +WIH+Y KK  
Sbjct: 202 MITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS 261

Query: 261 FDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWSAMIVAFATHGDGLKAISMFE 320
           F KYVKVNTALIDMFAKCGSL DA+SIFE M  +DTQAWSAMIVA+A HG   K++ MFE
Sbjct: 262 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFE 321

Query: 321 EMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKNYGITPGIKHYGCMVDLLGRT 380
            M+   V+PDEITFLGLL ACSH G VE+GR YF  M   +GI P IKHYG MVDLL R 
Sbjct: 322 RMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRA 381

Query: 381 GRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKRVIDRIFELDDSHGGDYVILS 440
           G L++AY FI +L I PTP+LWR LL+ACS+H N+D+A++V +RIFELDDSHGGDYVILS
Sbjct: 382 GNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILS 441

Query: 441 NLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCISVELRRALD 500
           NL AR  +WE V+ LRK+MKDR  VKVPGCSS+EVNNVVHEFFSGDGV   + +L RALD
Sbjct: 442 NLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALD 501

Query: 501 ELIKEIKLVGYVPDTSLVYHADMQEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNL 560
           E++KE+KL GYVPDTS+V HA+M ++ KE+ LRYHSEKLA+ FGLLNTPPGTTIRVVKNL
Sbjct: 502 EMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNL 561

Query: 561 RICGDCHNTAKLISLIFGRQIVIRDVQRFHQFEDGKCSC 600
           R+C DCHN AKLISLIFGR++V+RDVQRFH FEDGKCSC
Sbjct: 562 RVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSC 599

BLAST of Clc05G26590 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 484.6 bits (1246), Expect = 1.2e-136
Identity = 235/601 (39.10%), Postives = 366/601 (60.90%), Query Frame = 0

Query: 29  PHPLSLLSKCTSLRELKQIQAYTIKTNLQNDISILTKLINFCTLNPTISS---------- 88
           P  L   +K  + +E +QI  + +K     D+ + T LI+    N  +            
Sbjct: 138 PFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH 197

Query: 89  ------------------MDHAHHLFDQIPDKDIVLFNIMARGYARSNSPYLAFSLFAQL 148
                             +++A  LFD+IP KD+V +N M  GYA + +   A  LF  +
Sbjct: 198 RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257

Query: 149 LCSGLLPDDYTFSSLLKACASSKALKEGMELHCFAIKLGLNHNIYICPTLINMYAECNDM 208
           + + + PD+ T  +++ ACA S +++ G ++H +    G   N+ I   LI++Y++C ++
Sbjct: 258 MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL 317

Query: 209 NAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSVIMSC 268
             A G+F+ +    ++S+N +I GY   +   EAL LF+E+  S   P DVTMLS++ +C
Sbjct: 318 ETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC 377

Query: 269 ALLGALDLARWIHEYVKK--KGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQA 328
           A LGA+D+ RWIH Y+ K  KG      + T+LIDM+AKCG +  A  +F  +  +   +
Sbjct: 378 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS 437

Query: 329 WSAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMS 388
           W+AMI  FA HG    +  +F  M++ G++PD+ITF+GLL ACSH+G+++ GR  F +M+
Sbjct: 438 WNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT 497

Query: 389 KNYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMA 448
           ++Y +TP ++HYGCM+DLLG +G   EA   I+ +E++P  ++W +LL AC  HGNV++ 
Sbjct: 498 QDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELG 557

Query: 449 KRVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNV 508
           +   + + +++  + G YV+LSN+ A  GRW +V   R L+ D+G+ KVPGCSS+E+++V
Sbjct: 558 ESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSV 617

Query: 509 VHEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMQEEGKELVLRYHSEK 568
           VHEF  GD  H  + E+   L+E+   ++  G+VPDTS V   +M+EE KE  LR+HSEK
Sbjct: 618 VHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQ-EMEEEWKEGALRHHSEK 677

Query: 569 LAMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLISLIFGRQIVIRDVQRFHQFEDGKCS 600
           LA+AFGL++T PGT + +VKNLR+C +CH   KLIS I+ R+I+ RD  RFH F DG CS
Sbjct: 678 LAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCS 737

BLAST of Clc05G26590 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 483.8 bits (1244), Expect = 2.0e-136
Identity = 232/599 (38.73%), Postives = 360/599 (60.10%), Query Frame = 0

Query: 32  LSLLSKCTSLRELKQIQAYTIKTNLQNDISILTKLINFCTLNPTISSMDHAHHLFDQIPD 91
           +S L +C+   ELKQI A  +KT L  D   +TK ++FC  + +   + +A  +FD    
Sbjct: 18  MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77

Query: 92  KDIVLFNIMARGYARSNSPYLAFSLFAQLLCSGLLPDDYTFSSLLKACASSKALKEGMEL 151
            D  L+N+M RG++ S+ P  +  L+ ++LCS    + YTF SLLKAC++  A +E  ++
Sbjct: 78  PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137

Query: 152 HCFAIKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQP 211
           H    KLG  +++Y   +LIN YA   +   A  +FD + +P  VS+N++I GY ++ + 
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197

Query: 212 N-------------------------------EALSLFRELQASNLEPTDVTMLSVIMSC 271
           +                               EAL LF E+Q S++EP +V++ + + +C
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257

Query: 272 ALLGALDLARWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMHVRDTQAWS 331
           A LGAL+  +WIH Y+ K        +   LIDM+AKCG + +A+ +F+ +  +  QAW+
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317

Query: 332 AMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKN 391
           A+I  +A HG G +AIS F EM++ G++P+ ITF  +L ACS+ GLVE+G+  FYSM ++
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 377

Query: 392 YGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKPTPILWRTLLSACSTHGNVDMAKR 451
           Y + P I+HYGC+VDLLGR G LDEA  FI E+ +KP  ++W  LL AC  H N+++ + 
Sbjct: 378 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 437

Query: 452 VIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVH 511
           + + +  +D  HGG YV  +N+ A   +W+     R+LMK++GV KVPGCS++ +    H
Sbjct: 438 IGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTH 497

Query: 512 EFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMQEEGKELVLRYHSEKLA 571
           EF +GD  H    +++     + ++++  GYVP+   +    + ++ +E ++  HSEKLA
Sbjct: 498 EFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLA 557

Query: 572 MAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLISLIFGRQIVIRDVQRFHQFEDGKCSC 600
           + +GL+ T PGT IR++KNLR+C DCH   KLIS I+ R IV+RD  RFH F DGKCSC
Sbjct: 558 ITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSC 616

BLAST of Clc05G26590 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 476.1 bits (1224), Expect = 4.2e-134
Identity = 235/571 (41.16%), Postives = 364/571 (63.75%), Query Frame = 0

Query: 32  LSLLSKCTSLREL---KQIQAYTIKTNLQNDISILTKLINFCTLNPTISSMDHAHHLFDQ 91
           +S+L   ++LR +   K+I  Y +++   + ++I T L++   +     S++ A  LFD 
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD---MYAKCGSLETARQLFDG 299

Query: 92  IPDKDIVLFNIMARGYARSNSPYLAFSLFAQLLCSGLLPDDYTFSSLLKACASSKALKEG 151
           + ++++V +N M   Y ++ +P  A  +F ++L  G+ P D +    L ACA    L+ G
Sbjct: 300 MLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERG 359

Query: 152 MELHCFAIKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARS 211
             +H  +++LGL+ N+ +  +LI+MY +C +++ A  +F +++   +VS+NA+I G+A++
Sbjct: 360 RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQN 419

Query: 212 SQPNEALSLFRELQASNLEPTDVTMLSVIMSCALLGALDLARWIHEYVKKKGFDKYVKVN 271
            +P +AL+ F ++++  ++P   T +SVI + A L     A+WIH  V +   DK V V 
Sbjct: 420 GRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVT 479

Query: 272 TALIDMFAKCGSLTDAISIFEGMHVRDTQAWSAMIVAFATHGDGLKAISMFEEMKRAGVR 331
           TAL+DM+AKCG++  A  IF+ M  R    W+AMI  + THG G  A+ +FEEM++  ++
Sbjct: 480 TALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIK 539

Query: 332 PDEITFLGLLYACSHAGLVEQGRGYFYSMSKNYGITPGIKHYGCMVDLLGRTGRLDEAYN 391
           P+ +TFL ++ ACSH+GLVE G   FY M +NY I   + HYG MVDLLGR GRL+EA++
Sbjct: 540 PNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWD 599

Query: 392 FIHELEIKPTPILWRTLLSACSTHGNVDMAKRVIDRIFELDDSHGGDYVILSNLCARVGR 451
           FI ++ +KP   ++  +L AC  H NV+ A++  +R+FEL+   GG +V+L+N+      
Sbjct: 600 FIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASM 659

Query: 452 WEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCISVELRRALDELIKEIKL 511
           WE V  +R  M  +G+ K PGCS VE+ N VH FFSG   H  S ++   L++LI  IK 
Sbjct: 660 WEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKE 719

Query: 512 VGYVPDTSLVYHADMQEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLRICGDCHN 571
            GYVPDT+LV    ++ + KE +L  HSEKLA++FGLLNT  GTTI V KNLR+C DCHN
Sbjct: 720 AGYVPDTNLV--LGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHN 779

Query: 572 TAKLISLIFGRQIVIRDVQRFHQFEDGKCSC 600
             K ISL+ GR+IV+RD+QRFH F++G CSC
Sbjct: 780 ATKYISLVTGREIVVRDMQRFHHFKNGACSC 805

BLAST of Clc05G26590 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 471.5 bits (1212), Expect = 1.0e-132
Identity = 241/623 (38.68%), Postives = 369/623 (59.23%), Query Frame = 0

Query: 30  HPLSL---LSKCTSLRELKQIQAYTIKTNLQNDISILTKLINFC-TLNPTISSMDHAHHL 89
           HP SL   ++ C ++R+L QI A  IK+    D     +++ FC T +     +D+AH +
Sbjct: 22  HPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKI 81

Query: 90  FDQIPDKDIVLFNIMARGYARS--NSPYLAFSLFAQLLCSGLL-PDDYTFSSLLKACASS 149
           F+Q+P ++   +N + RG++ S  +   +A +LF +++    + P+ +TF S+LKACA +
Sbjct: 82  FNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKT 141

Query: 150 KALKEGMELHCFAIKLGLNHNIYICPTLINMYAEC------------------------- 209
             ++EG ++H  A+K G   + ++   L+ MY  C                         
Sbjct: 142 GKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDR 201

Query: 210 --------------------NDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSL 269
                                D  AAR +FD+M Q  +VS+N +I+GY+ +    +A+ +
Sbjct: 202 RKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEV 261

Query: 270 FRELQASNLEPTDVTMLSVIMSCALLGALDLARWIHEYVKKKGFDKYVKVNTALIDMFAK 329
           FRE++  ++ P  VT++SV+ + + LG+L+L  W+H Y +  G      + +ALIDM++K
Sbjct: 262 FREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSK 321

Query: 330 CGSLTDAISIFEGMHVRDTQAWSAMIVAFATHGDGLKAISMFEEMKRAGVRPDEITFLGL 389
           CG +  AI +FE +   +   WSAMI  FA HG    AI  F +M++AGVRP ++ ++ L
Sbjct: 322 CGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINL 381

Query: 390 LYACSHAGLVEQGRGYFYSMSKNYGITPGIKHYGCMVDLLGRTGRLDEAYNFIHELEIKP 449
           L ACSH GLVE+GR YF  M    G+ P I+HYGCMVDLLGR+G LDEA  FI  + IKP
Sbjct: 382 LTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKP 441

Query: 450 TPILWRTLLSACSTHGNVDMAKRVIDRIFELDDSHGGDYVILSNLCARVGRWEDVNHLRK 509
             ++W+ LL AC   GNV+M KRV + + ++     G YV LSN+ A  G W +V+ +R 
Sbjct: 442 DDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRL 501

Query: 510 LMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSL 569
            MK++ + K PGCS ++++ V+HEF   D  H  + E+   L E+  +++L GY P T+ 
Sbjct: 502 RMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQ 561

Query: 570 VYHADMQEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVVKNLRICGDCHNTAKLISLIF 601
           V   +++EE KE VL YHSEK+A AFGL++T PG  IR+VKNLRIC DCH++ KLIS ++
Sbjct: 562 VL-LNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVY 621

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038893049.10.0e+0093.82pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Benincasa ... [more]
XP_008446357.10.0e+0093.33PREDICTED: pentatricopeptide repeat-containing protein At2g02980, chloroplastic ... [more]
XP_031742214.10.0e+0092.83pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucumis sa... [more]
XP_022151060.10.0e+0090.48pentatricopeptide repeat-containing protein At2g02980, chloroplastic isoform X1 ... [more]
XP_023541252.10.0e+0090.82pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita ... [more]
Match NameE-valueIdentityDescription
Q8LK934.4e-23766.67Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop... [more]
Q9LN011.7e-13539.10Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Q9FJY72.8e-13538.73Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
Q3E6Q15.9e-13341.16Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
Q9FI801.5e-13138.68Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A5A7STH80.0e+0093.33Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BFK00.0e+0093.33pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucumis ... [more]
A0A0A0KU150.0e+0092.83DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G6051... [more]
A0A6J1DA680.0e+0090.48pentatricopeptide repeat-containing protein At2g02980, chloroplastic isoform X1 ... [more]
A0A6J1HTT70.0e+0090.15pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucurbit... [more]
Match NameE-valueIdentityDescription
AT2G02980.13.1e-23866.67Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G08070.11.2e-13639.10Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G66520.12.0e-13638.73Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G11290.14.2e-13441.16Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G48910.11.0e-13238.68Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 95..128
e-value: 0.0014
score: 16.6
coord: 196..229
e-value: 1.8E-7
score: 28.9
coord: 298..331
e-value: 1.7E-6
score: 25.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 193..240
e-value: 3.8E-10
score: 39.8
coord: 295..341
e-value: 1.6E-9
score: 37.8
coord: 92..140
e-value: 5.1E-9
score: 36.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 436..464
e-value: 0.9
score: 9.9
coord: 269..293
e-value: 0.031
score: 14.5
coord: 401..425
e-value: 0.13
score: 12.5
coord: 370..393
e-value: 0.18
score: 12.1
coord: 169..191
e-value: 0.048
score: 13.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 194..228
score: 11.619036
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 295..329
score: 11.564229
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 93..127
score: 9.63504
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 153..245
e-value: 5.7E-21
score: 76.7
coord: 30..152
e-value: 1.2E-15
score: 59.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 360..508
e-value: 1.1E-14
score: 56.7
coord: 246..359
e-value: 2.6E-24
score: 88.2
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 468..593
e-value: 5.7E-37
score: 126.4
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 22..589
NoneNo IPR availablePANTHERPTHR47926:SF132BNAA02G26650D PROTEINcoord: 22..589

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc05G26590.2Clc05G26590.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1900865 chloroplast RNA modification
biological_process GO:0031425 chloroplast RNA processing
cellular_component GO:0009507 chloroplast
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding