Clc05G22250 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGGTTTTTATATTCTTCTTGTATGTTCTAGACGTGTTATGATTTTTGGGGCGATCTTTTTCCATGATTGGCGAGGTCCAAGAACTGCCAAATATTTACCCACTCTAGCTAAAAGAAACGGAACAAAAACGAGCTAACAGTCGGAAAAAAAAAACGTAGCTTTGTAGAAACTGACGTATGGTATTGAAAATAGTTGATACCCCAAATAAATCAAGTGGAATAGAGATGCTGTTTGATGGAATGATTCGTGCAAAATAACCCAAGCAGTCGAAAGTTGAATGTGATGATGATTATCATGTAAAAGAAAAGCGAGTTTGAAGTTGAGATTTCAATGGGACCATTTCCACTCTCTGTCTGTTTGTTATAAATTTGTGGGTCTGTTCTGTTTGTGTTGTATTATTTTAACATATCATGTCCTATTAACAACAACTATTAATATGCTGAGTGGGGAAGAAGAGATAAGGTGTTGTAAGCAGCGAAAAGAAACCTCTCAATAACAAAGCCTCTCTCTCTCTATCTTTCTTTCTACCATTGGATTCTTTTTTATCTAAAAGAACATCTTCTGCACCCGAACATATCTCTTTATTCACATTTTATGTATGTGCTCCTGAGCCCTTTACAAATGATATTATAATTTATTTGCTTCCTCTGTTTGTCACATATCCAGAGAGATTTCCTTGATCCGGGCACCAAATGACACATAATTATATTGTTGCTTTTGATTGAGTTTAATGATTGTACCATATTAAAAGACAGGAACCAAGAAGGCTTATACTGTACTACTAGTGTACCATCAGTAATTCTAACTCCTTTTTTTTTCCCTAAAAATAAAATCAGCCCCAAAGTTCCATTCTTTCTTTCCCTTGTCAGCGCAAAAATGGCTTCTTTCATATTTGTTTTCGGTACGTTGTCGGGTTATGATTATTTACCAACATGTCTACCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCCATATTTTTAAGTATTGGGAAAAGTACAACTCTTCCCACTACCTTCACATTCCTTCTCAGATTTTGCCCTTTACTATTAAACTATATTTTGGTTTGGTGCATCTGTGATCAGCAAGTGAATTTTCAGAAGGCATTCATTCAACTACCAAAAAGTGTGAAAGATTTTACAAAGATTTTAGTTATCTTTTTCCTTAACTTTTTCTCCTTTATTTTAAAGGAGTTCGTTGGCAATACTTCCACATTAAGCAGGTAGGCTGGCTTCAGAACCTGATCCTGATCTGCCTCGAACAGCGTTCCCAACGTTATCAGTGAGAAAAATTTCACCCTATTGCACCAGCTTCCTACTCTTCTATTTCAAACGGTGACGTATTCAATCAAAAATCCACTATTCTTCTTCCATTTGGTTTTCCCCCTCCTCTTGCTCTTGATTCTTGCCACGTACTCACCGCCGGAGAATCAAACGGCTCCTGCACCTCACCGCCAATTGTAAAAAACTTTGAACTTGCTCACTTTGAGATTTCTGACAACTATCATGTGGAGTGGGGCTATTGGGTTCTTCCAAAAAGGAGGAAAAAAAAAAAAAAAGAAAAAGAAAAAAAAAACCCAACAATTCTTCCACCGAGATTTTAGTACCCAAGAAACGAAACGATTCATGCACTAGAGGAGAGAGGAAACAAAAATAATTTAAAATTTCTCAAACCATATATTGTTTCATGGTAGTGTTATTAAATATATGAATCTAAATATTTGAATATTAAATAATGAGATAACTAAGGTTCGAATTTGCAGAATAAATTTATCAATTTTATATATTAAAATTAAAACCAAATAATTATTTAATTAAATTTGAGAGAATAAGTAATGTAGTTATAATTAAAATTAATTGTTTAATATATTTTTATATTGATTATTTATATAATTACTCAAAATATTCAATAAATGAAATTTTAATTAATCATTATTTTAATTATTTTTCTTTAATTAATAAAAATAATTAAATAAATATAAATTTATTATAATATTAATAGTTAATAATAAAATTTTATATTACTTTATAAAATATTTTTAATTTTTTTGAGAGATTAAAATGGACACTCTAGTATTACTCAATATCGAATAATTGAACAAAATAAAACTTTTAAGAAGGGAATAAACACCAATTACAAGCTTCATGTTCTATCCATTTTAATTCCGAAATTTCAATTGCAATTCAAATTTATTTAAGTGTTCGATCTTGAACTCTCTAATAAGTTTCCATTCTAAATTTTGTCAAAAAAAGAGAAAAAGAAAAAAAAAGGAGTTCTCAAGTATGCATTTCGTGAACTATAACATATGTACGATACAAAATGGATAAAAAAATTAAGGAAAAATGAAATTAGAGTTGTCTTGAAATTTATGAAGTTAAAAAGTATTTAATTGTTACTTTGTACATTAATCAACCTTGGACAAACACAGAAAAAAAAATACATATTTTCCTTCAGATCAAATAGCTACGAAATAAAAAAGAAGGAAGAAATACATTTAGAATTAAAGTAATAATTTCTCATAATATTGACATAAGTAAAAGGCTAAAATTAAATTGATTTTAAATTTGAGGTTAATTTTCATTTAGAATAAGTGTCTCTATGCAATTCTTGCTTGCATATCTGTAAGAGCCTTGGATTGATGTGGTGCAAGATTTTGATATCTTCTTGTAGGCAAAAAGATAAGATGTTGTAACAATATTTTAATCCAAGCATTGGGGGTTTCTGCATAGGCATGAATCTCACCCTTCTCCTTATCCTGTACCCTCTCCTTTTAACGGCCACGATCTATTTAATCAACTCACCATTGTCGTTTCAGATGATCATCATCTAATTTCTGCTTCCAATAATCACTAACACCCAGCAGGTCCTTTTCATTATTTATCGTTTCCATGAATGGCAATCGATTGAGACTTTGTTTTCGAATAAAGAAGTAAAATATTAGAAAAAGCTGATGCCTAAAAAAGGAAATTTCTTTTCTTCTTCTTCTTTTTTTTTTCTCCTTTCCCCCCATGGAAATTATTAATAATATAATAATAATAAAAAAATGGTCATATACTATTCAACCCATTTGTTATATATGGAATGGCAACCAAATGATAGCGTGTTCTTTGTTCTTTGTATTGTAAGTTTTTATTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCCAATTTTTCTGAAATTCGGTCACTACCAAAAGTATAACAGAGGATCGGATCAGAGATTTAATCCTATGGAAAATGATGATCTAAAATCGGAAGATCAGATGGAGATTATGATGATGATGCAACAAATGGAAAAAATCCCTGAATTTTACAATGATTTCTCACCGCCGTCCTCTGATTTCAGCTCAAGCAGCACCGATCACCCACATTGCCACCTGGATTCTTCCTCATCGCCTCCCTTATGCATCAACAACCCACCTTATAATAATTTCCCACAATCTACTGTTTCATTCCCGGCCACCACTTCACGGTGGCGAAACTCCGGTGGTGAAACAGAGAGTTTGCAGAAACAGAGGTCAGTGGCGGCGATGAGGGAGATGATATTCCGAATAGCAGTGATGCAACCAATTCACATAGACCCAGAAGCGGTGAAGCCACCAAAAAGAAGGAACGTCAAGATTTCAACTGACCCACAAAGCGTAGCGGCTAGGCATAGGAGAGAGAGAATTAGTGAGAGAATTAGAATACTTCAAAGACTGGTCCCTGGAGGTACTAAAATGGACACTGCTTCTATGTTGGATGAAGCTATTCATTATGTTAAATTCTTAAAGACCCAAGTTCAGTCACTTGAAAGAGCCGCCGCCGCCGGCGGGAACCGCCCAATCACTGGTGCTGCTGCTAGCGTCGGGTTCCCTTTGGAAATGTCAACTGGGAGCTACATCCCCAATCACTCACAACCTTGA ATGTTGGGTTTTTATATTCTTCTTGTATGTTCTAGACGTGTTATGATTTTTGGGGCGATCTTTTTCCATGATTGGCGAGGAGTTCGTTGGCAATACTTCCACATTAAGCAGGTAGGCTGGCTTCAGAACCTGATCCTGATCTGCCTCGAACAGCGTTCCCAACGTTATCAAGGATCGGATCAGAGATTTAATCCTATGGAAAATGATGATCTAAAATCGGAAGATCAGATGGAGATTATGATGATGATGCAACAAATGGAAAAAATCCCTGAATTTTACAATGATTTCTCACCGCCGTCCTCTGATTTCAGCTCAAGCAGCACCGATCACCCACATTGCCACCTGGATTCTTCCTCATCGCCTCCCTTATGCATCAACAACCCACCTTATAATAATTTCCCACAATCTACTGTTTCATTCCCGGCCACCACTTCACGGTGGCGAAACTCCGGTGGTGAAACAGAGAGTTTGCAGAAACAGAGGTCAGTGGCGGCGATGAGGGAGATGATATTCCGAATAGCAGTGATGCAACCAATTCACATAGACCCAGAAGCGGTGAAGCCACCAAAAAGAAGGAACGTCAAGATTTCAACTGACCCACAAAGCGTAGCGGCTAGGCATAGGAGAGAGAGAATTAGTGAGAGAATTAGAATACTTCAAAGACTGGTCCCTGGAGGTACTAAAATGGACACTGCTTCTATGTTGGATGAAGCTATTCATTATGTTAAATTCTTAAAGACCCAAGTTCAGTCACTTGAAAGAGCCGCCGCCGCCGGCGGGAACCGCCCAATCACTGGTGCTGCTGCTAGCGTCGGGTTCCCTTTGGAAATGTCAACTGGGAGCTACATCCCCAATCACTCACAACCTTGA ATGTTGGGTTTTTATATTCTTCTTGTATGTTCTAGACGTGTTATGATTTTTGGGGCGATCTTTTTCCATGATTGGCGAGGAGTTCGTTGGCAATACTTCCACATTAAGCAGGTAGGCTGGCTTCAGAACCTGATCCTGATCTGCCTCGAACAGCGTTCCCAACGTTATCAAGGATCGGATCAGAGATTTAATCCTATGGAAAATGATGATCTAAAATCGGAAGATCAGATGGAGATTATGATGATGATGCAACAAATGGAAAAAATCCCTGAATTTTACAATGATTTCTCACCGCCGTCCTCTGATTTCAGCTCAAGCAGCACCGATCACCCACATTGCCACCTGGATTCTTCCTCATCGCCTCCCTTATGCATCAACAACCCACCTTATAATAATTTCCCACAATCTACTGTTTCATTCCCGGCCACCACTTCACGGTGGCGAAACTCCGGTGGTGAAACAGAGAGTTTGCAGAAACAGAGGTCAGTGGCGGCGATGAGGGAGATGATATTCCGAATAGCAGTGATGCAACCAATTCACATAGACCCAGAAGCGGTGAAGCCACCAAAAAGAAGGAACGTCAAGATTTCAACTGACCCACAAAGCGTAGCGGCTAGGCATAGGAGAGAGAGAATTAGTGAGAGAATTAGAATACTTCAAAGACTGGTCCCTGGAGGTACTAAAATGGACACTGCTTCTATGTTGGATGAAGCTATTCATTATGTTAAATTCTTAAAGACCCAAGTTCAGTCACTTGAAAGAGCCGCCGCCGCCGGCGGGAACCGCCCAATCACTGGTGCTGCTGCTAGCGTCGGGTTCCCTTTGGAAATGTCAACTGGGAGCTACATCCCCAATCACTCACAACCTTGA MLGFYILLVCSRRVMIFGAIFFHDWRGVRWQYFHIKQVGWLQNLILICLEQRSQRYQGSDQRFNPMENDDLKSEDQMEIMMMMQQMEKIPEFYNDFSPPSSDFSSSSTDHPHCHLDSSSSPPLCINNPPYNNFPQSTVSFPATTSRWRNSGGETESLQKQRSVAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKTQVQSLERAAAAGGNRPITGAAASVGFPLEMSTGSYIPNHSQP Homology
BLAST of Clc05G22250 vs. NCBI nr
Match: XP_038899834.1 (transcription factor HEC2-like [Benincasa hispida]) HSP 1 Score: 406.4 bits (1043), Expect = 2.1e-109 Identity = 221/241 (91.70%), Postives = 224/241 (92.95%), Query Frame = 0
BLAST of Clc05G22250 vs. NCBI nr
Match: XP_004141382.1 (transcription factor HEC2 [Cucumis sativus] >KGN55203.1 hypothetical protein Csa_012883 [Cucumis sativus]) HSP 1 Score: 378.6 bits (971), Expect = 4.7e-101 Identity = 207/235 (88.09%), Postives = 212/235 (90.21%), Query Frame = 0
BLAST of Clc05G22250 vs. NCBI nr
Match: XP_008452566.1 (PREDICTED: transcription factor HEC2-like [Cucumis melo]) HSP 1 Score: 374.4 bits (960), Expect = 8.9e-100 Identity = 207/234 (88.46%), Postives = 213/234 (91.03%), Query Frame = 0
BLAST of Clc05G22250 vs. NCBI nr
Match: KAA0064392.1 (transcription factor HEC2-like [Cucumis melo var. makuwa] >TYK20194.1 transcription factor HEC2-like [Cucumis melo var. makuwa]) HSP 1 Score: 354.8 bits (909), Expect = 7.3e-94 Identity = 196/223 (87.89%), Postives = 202/223 (90.58%), Query Frame = 0
BLAST of Clc05G22250 vs. NCBI nr
Match: XP_022975973.1 (transcription factor HEC2-like [Cucurbita maxima]) HSP 1 Score: 313.9 bits (803), Expect = 1.4e-81 Identity = 186/227 (81.94%), Postives = 192/227 (84.58%), Query Frame = 0
BLAST of Clc05G22250 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 4.2e-44 Identity = 120/218 (55.05%), Postives = 143/218 (65.60%), Query Frame = 0
BLAST of Clc05G22250 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 5.5e-44 Identity = 115/201 (57.21%), Postives = 132/201 (65.67%), Query Frame = 0
BLAST of Clc05G22250 vs. ExPASy Swiss-Prot
Match: Q9LXD8 (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 4.8e-32 Identity = 85/160 (53.12%), Postives = 106/160 (66.25%), Query Frame = 0
BLAST of Clc05G22250 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.4e-28 Identity = 72/140 (51.43%), Postives = 96/140 (68.57%), Query Frame = 0
BLAST of Clc05G22250 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3) HSP 1 Score: 123.6 bits (309), Expect = 3.6e-27 Identity = 65/105 (61.90%), Postives = 78/105 (74.29%), Query Frame = 0
BLAST of Clc05G22250 vs. ExPASy TrEMBL
Match: A0A0A0L0B3 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G639900 PE=4 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 2.3e-101 Identity = 207/235 (88.09%), Postives = 212/235 (90.21%), Query Frame = 0
BLAST of Clc05G22250 vs. ExPASy TrEMBL
Match: A0A1S3BU58 (transcription factor HEC2-like OS=Cucumis melo OX=3656 GN=LOC103493551 PE=4 SV=1) HSP 1 Score: 374.4 bits (960), Expect = 4.3e-100 Identity = 207/234 (88.46%), Postives = 213/234 (91.03%), Query Frame = 0
BLAST of Clc05G22250 vs. ExPASy TrEMBL
Match: A0A5A7V7R5 (Transcription factor HEC2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003280 PE=4 SV=1) HSP 1 Score: 354.8 bits (909), Expect = 3.5e-94 Identity = 196/223 (87.89%), Postives = 202/223 (90.58%), Query Frame = 0
BLAST of Clc05G22250 vs. ExPASy TrEMBL
Match: A0A6J1IKS0 (transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111476512 PE=4 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 6.9e-82 Identity = 186/227 (81.94%), Postives = 192/227 (84.58%), Query Frame = 0
BLAST of Clc05G22250 vs. ExPASy TrEMBL
Match: A0A6J1FE54 (transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111443152 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 2.0e-81 Identity = 186/232 (80.17%), Postives = 193/232 (83.19%), Query Frame = 0
BLAST of Clc05G22250 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 179.9 bits (455), Expect = 3.0e-45 Identity = 120/218 (55.05%), Postives = 143/218 (65.60%), Query Frame = 0
BLAST of Clc05G22250 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 179.5 bits (454), Expect = 3.9e-45 Identity = 115/201 (57.21%), Postives = 132/201 (65.67%), Query Frame = 0
BLAST of Clc05G22250 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 139.8 bits (351), Expect = 3.4e-33 Identity = 85/160 (53.12%), Postives = 106/160 (66.25%), Query Frame = 0
BLAST of Clc05G22250 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 128.3 bits (321), Expect = 1.0e-29 Identity = 72/140 (51.43%), Postives = 96/140 (68.57%), Query Frame = 0
BLAST of Clc05G22250 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 123.6 bits (309), Expect = 2.5e-28 Identity = 65/105 (61.90%), Postives = 78/105 (74.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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