Clc05G10870 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc05G10870
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	NADH dehydrogenase
Location	ClcChr05: 8759738 .. 8761549 (+)
RNA-Seq Expression	Clc05G10870
Synteny	Clc05G10870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGAGAGAAAGCCCCCTTCCCTCGCCCGAAGCGACTGGCTCGTCACGACTGAGAAGTGTGATCACGAGAGAGAACGCAAAAGTTTTCCGACGATGTTTCTGCGAGCGATCGGACGGCCATTATTGGCCAAAGTTAAGCAGACGACGGGGATCGTTGGTCTGGATGTTGTCCCCAACGCCCGAGAGGTCTTGATCGGCCTTTACAGTAAAACCCTAAAGGAGATCCAGGCCGTTCCCGAGGATGAAGGATACCGTAAGGCGGTCGAGAGCTTCACGCGCCACCGCTTGAAGGTCTGCCAGGAGGAAGAGGACTGGGAGAAAATCGAACAGCGGCTTGGCTGTGGTCAGGTCGAGGAGCTAATCGAGGAGGCTCAGGACGAGCTCAAACTCATTGCTAAAATGATCGGTATGTACAATTTACTGCCACCAAAATTCTATGTTTATGAATTTGTGAAGTTTTGATGTACAGTAGATTTTCGTTACATTTTCTCTTCCTGTCTGTGTTTGGTTGGGAGGGAATGAAAGAATTGGAAAAGGAGGGTATCAGGATCTGTATGTCATATTTATATTTTTGCATTGCGTTGAATGACGAAAGAACATTTTTCCCCATCTCGTTGAGGATAAAGAGTGGGGACTTTCAAGTATTGAGAGTCAAGGAATGGAATTTGCATCTTGTTGCACTGAAAAACTTGGGCAATGCCTATAGATTAGACTTTATTTATCCTTCTTCCATTCTACCCTTTTCTTAGCTGGTTGAACGATGGGGCTTATGGCATAGTAGCAATCTTCGATTTTCCTTTCATCTTAACCTGAGTATTAGCTATCAAAATTGTCTAGATATCTTCTCATTTTACCGTAGGAGTGGTATAAAAATTTCTTCAATTTATGAATCTCAGATCCTTCGCTGGTCCTTAGCTACCATTTAAGCAATTGGATCACTACTTGACCCATTAATATCACTGAACTTTTGAAATTCATATTTTGTTCTCACTAAGGTGGATGAAGGTGCCATATTGCAAACATTAAAACGTAGTCAAACTGGAGTTATTATCTAGCCAAGAAGTTTGAAGTTCTTCACTGATGACAGAAATTGTATTAGTAGAGATTACAGTTTATTTCTTTCTTTTCCCAATCTTAAGGAGGTTTGTTTGTTAATCTCTCTCGCCCCAGTTTTTCAGTTTGATTGAGAGTAATTACTAGTTTGCCTAACGTCTCTGGTCTTGCTGCATTTGGAGTACTCGAATTATTTCAGATATGGACCTTTATAGAATTCTGTGTGTCATCACAATATGTTGGTGTTGTCTTAGTGATAAGTTAACTTCAAACATGCAGAATGGGATCCCTGGGGTATTCCTGATGACTACGAATGTGAAGTGATTGAGAATGATGCTCCGGTGCCAAAGCACGTTCCTCTGCACCGACCAGGCCCTCTCCCTGAAGAGTTTTACAAAACGCTTGAGGCCATCAGTGGTGATAGTGCAAAAAAAGTAGAGACAGCTGAAAAAGCATCTCAGGTGACAGAGTGACCTCTTTTTTATCATTTGGAGGATTCGAGTTTCAGAATCGAAGCAGTTCTTTGTTTTTGGCCTTGATGTTATCTAGTTATGTTTGTTCTTCAATAGAGTGCCTGTATGCTGGAATGATTGTTCACAAATTCGTGTACTTCAATAATCTTTACCCAATTCTGGAATTACATAAAATCACTTTTTCATTGCCTTGTTTAATTTTTACTTTGGCATCATCAAACCCAGTCATGGTTGGGTTTTGAGAATGAGCAATTTTAATTTTAATTTTCTTACCATCTGAATATGAA

mRNA sequence

GCGAGAGAAAGCCCCCTTCCCTCGCCCGAAGCGACTGGCTCGTCACGACTGAGAAGTGTGATCACGAGAGAGAACGCAAAAGTTTTCCGACGATGTTTCTGCGAGCGATCGGACGGCCATTATTGGCCAAAGTTAAGCAGACGACGGGGATCGTTGGTCTGGATGTTGTCCCCAACGCCCGAGAGGTCTTGATCGGCCTTTACAGTAAAACCCTAAAGGAGATCCAGGCCGTTCCCGAGGATGAAGGATACCGTAAGGCGGTCGAGAGCTTCACGCGCCACCGCTTGAAGGTCTGCCAGGAGGAAGAGGACTGGGAGAAAATCGAACAGCGGCTTGGCTGTGGTCAGGTCGAGGAGCTAATCGAGGAGGCTCAGGACGAGCTCAAACTCATTGCTAAAATGATCGAATGGGATCCCTGGGGTATTCCTGATGACTACGAATGTGAAGTGATTGAGAATGATGCTCCGGTGCCAAAGCACGTTCCTCTGCACCGACCAGGCCCTCTCCCTGAAGAGTTTTACAAAACGCTTGAGGCCATCAGTGGTGATAGTGCAAAAAAAGTAGAGACAGCTGAAAAAGCATCTCAGGTGACAGAGTGACCTCTTTTTTATCATTTGGAGGATTCGAGTTTCAGAATCGAAGCAGTTCTTTGTTTTTGGCCTTGATGTTATCTAGTTATGTTTGTTCTTCAATAGAGTGCCTGTATGCTGGAATGATTGTTCACAAATTCGTGTACTTCAATAATCTTTACCCAATTCTGGAATTACATAAAATCACTTTTTCATTGCCTTGTTTAATTTTTACTTTGGCATCATCAAACCCAGTCATGGTTGGGTTTTGAGAATGAGCAATTTTAATTTTAATTTTCTTACCATCTGAATATGAA

Coding sequence (CDS)

ATGTTTCTGCGAGCGATCGGACGGCCATTATTGGCCAAAGTTAAGCAGACGACGGGGATCGTTGGTCTGGATGTTGTCCCCAACGCCCGAGAGGTCTTGATCGGCCTTTACAGTAAAACCCTAAAGGAGATCCAGGCCGTTCCCGAGGATGAAGGATACCGTAAGGCGGTCGAGAGCTTCACGCGCCACCGCTTGAAGGTCTGCCAGGAGGAAGAGGACTGGGAGAAAATCGAACAGCGGCTTGGCTGTGGTCAGGTCGAGGAGCTAATCGAGGAGGCTCAGGACGAGCTCAAACTCATTGCTAAAATGATCGAATGGGATCCCTGGGGTATTCCTGATGACTACGAATGTGAAGTGATTGAGAATGATGCTCCGGTGCCAAAGCACGTTCCTCTGCACCGACCAGGCCCTCTCCCTGAAGAGTTTTACAAAACGCTTGAGGCCATCAGTGGTGATAGTGCAAAAAAAGTAGAGACAGCTGAAAAAGCATCTCAGGTGACAGAGTGA

Protein sequence

MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEEDWEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPWGIPDDYECEVIENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSAKKVETAEKASQVTE

Homology

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BLAST of Clc05G10870 vs. NCBI nr
Match: XP_038874963.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Benincasa hispida])

HSP 1 Score: 330.1 bits (845), Expect = 1.1e-86
Identity = 163/168 (97.02%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLR IGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRVIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPWGIPDDYECEVI 120
           TRHRLKVCQEEEDWEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPWG+PDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSAKKVETAEKASQVTE 169
           ENDAPVPKHVPLHRPGPLPEEFYKTLEAI  DSAKKVETAEKA QVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAIGSDSAKKVETAEKAPQVTE 168

[Close]

BLAST of Clc05G10870 vs. NCBI nr
Match: XP_008439300.1 (PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Cucumis melo])

HSP 1 Score: 329.7 bits (844), Expect = 1.5e-86
Identity = 162/168 (96.43%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPWGIPDDYECEVI 120
           TRHRLKVCQEEEDWE IE+RLGCGQVEELIEEAQDELKLIAKMIEWDPWG+PDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSAKKVETAEKASQVTE 169
           ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDS +KVET EKASQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSTRKVETTEKASQVTE 168

[Close]

BLAST of Clc05G10870 vs. NCBI nr
Match: XP_004140748.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Cucumis sativus] >KGN57450.2 hypothetical protein Csa_010484 [Cucumis sativus])

HSP 1 Score: 328.6 bits (841), Expect = 3.2e-86
Identity = 161/168 (95.83%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPWGIPDDYECEVI 120
           TRHRLKVCQEEEDWE IE+RLGCGQVEELIEEAQDELKLI KMIEWDPWG+PDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIGKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSAKKVETAEKASQVTE 169
           ENDAPVPKH+PLHRPGPLPEEFYKTLEAISGDS KKVET EKASQVTE
Sbjct: 121 ENDAPVPKHIPLHRPGPLPEEFYKTLEAISGDSTKKVETPEKASQVTE 168

[Close]

BLAST of Clc05G10870 vs. NCBI nr
Match: XP_023553539.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.8 bits (839), Expect = 5.5e-86
Identity = 161/168 (95.83%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPWGIPDDYECEVI 120
           T HRLKVCQEEEDWEKIE+RLGCGQVEELIEEAQDELKLIAKMIEWDPWG+PDDYECEVI
Sbjct: 61  TNHRLKVCQEEEDWEKIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSAKKVETAEKASQVTE 169
           ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGD A+KVE+AEK SQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDGAQKVESAEKTSQVTE 168

[Close]

BLAST of Clc05G10870 vs. NCBI nr
Match: XP_022984248.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Cucurbita maxima])

HSP 1 Score: 326.6 bits (836), Expect = 1.2e-85
Identity = 160/168 (95.24%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPWGIPDDYECEVI 120
           T HRLKVCQEEEDWEKIE+RLGCGQVEELIEEAQDELKLIAKMIEWDPWG+PDDYECEVI
Sbjct: 61  TNHRLKVCQEEEDWEKIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSAKKVETAEKASQVTE 169
           ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGD A+KV++AEK SQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDGAQKVDSAEKTSQVTE 168

[Close]

BLAST of Clc05G10870 vs. ExPASy Swiss-Prot
Match: Q9FLX7 (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g52840 PE=1 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 7.8e-75
Identity = 135/160 (84.38%), Postives = 145/160 (90.62%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAR VLI LYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNARAVLIDLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPWGIPDDYECEVI 120
           TR RL VC+EEEDWE IE+RLGCGQVEELIEEA+DEL LI KMIEWDPWG+PDDYECEVI
Sbjct: 61  TRQRLNVCKEEEDWEMIEKRLGCGQVEELIEEARDELTLIGKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSAKKVETA 161
           ENDAP+PKHVP HRPGPLPE+FYKTLE +  +S  ++  A
Sbjct: 121 ENDAPIPKHVPQHRPGPLPEQFYKTLEGLIAESKTEIPAA 160

[Close]

BLAST of Clc05G10870 vs. ExPASy Swiss-Prot
Match: Q559Z4 (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Dictyostelium discoideum OX=44689 GN=ndufa5 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.0e-18
Identity = 46/107 (42.99%), Postives = 72/107 (67.29%), Query Frame = 0


Query: 14  VKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEED 73
           +K++TGI GL V PNAR +L GLY++ LK+++ +P   GYRK+ E  T+ RL V + E D
Sbjct: 6   IKKSTGITGLKVEPNARHILAGLYNQLLKKLEILPPTAGYRKSAELETKFRLGVIENETD 65

Query: 74  WEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPWGIPDDYECEVI 121
             KIE ++  GQ+EELI +A+++LK++  + E   W +PD  +  V+
Sbjct: 66  IVKIENKIYAGQIEELIVQAKNDLKVVDLVHESRAWELPDKNKPPVV 112

[Close]

BLAST of Clc05G10870 vs. ExPASy Swiss-Prot
Match: P23935 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Bos taurus OX=9913 GN=NDUFA5 PE=1 SV=3)

HSP 1 Score: 83.6 bits (205), Expect = 2.4e-15
Identity = 42/96 (43.75%), Postives = 62/96 (64.58%), Query Frame = 0


Query: 14  VKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEED 73
           +K+TTG+VGL V     E L  LY+K L  +  +P++  YRK  E  T  +L + + E D
Sbjct: 5   LKKTTGLVGLAVCETPHERLKILYTKILDVLGHIPKNAAYRKYTEQITNEKLSMVKAEPD 64

Query: 74  WEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPW 110
            +K+E+RL  GQ+EE+I +A++EL L  KMI+W PW
Sbjct: 65  VKKLEERLQGGQIEEVILQAENELSLARKMIQWKPW 100

[Close]

BLAST of Clc05G10870 vs. ExPASy Swiss-Prot
Match: Q9CPP6 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Mus musculus OX=10090 GN=Ndufa5 PE=1 SV=3)

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-13
Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 14  VKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEED 73
           +K+TTG+VGL V     E L  LY+KTL  ++  P+   YRK  E  T  +L + + E D
Sbjct: 5   LKKTTGLVGLAVCDTPHERLTILYTKTLDILKHFPKHAAYRKYTEQITNEKLDMVKAEPD 64

Query: 74  WEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPW 110
            +K+E  L  G+VEE+I +A+ EL L  KM++W PW
Sbjct: 65  VKKLEALLQGGEVEEVILQAEKELSLARKMLKWKPW 100

[Close]

BLAST of Clc05G10870 vs. ExPASy Swiss-Prot
Match: Q4R5J1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Macaca fascicularis OX=9541 GN=NDUFA5 PE=3 SV=3)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-13
Identity = 40/96 (41.67%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 14  VKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESFTRHRLKVCQEEED 73
           +K+TTG+VGL V     E L  LY+K L  +  +P++  YRK  E  T  +L + + E D
Sbjct: 5   LKKTTGLVGLAVCSTPHERLSILYTKILDVLAEIPKNAAYRKYTEQITNEKLAMVKAEPD 64

Query: 74  WEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPW 110
            +K+E +L  GQ+EE+I +A+ EL L  KM +W PW
Sbjct: 65  VKKLEDQLQGGQLEEVILQAEHELSLARKMRDWKPW 100

[Close]

BLAST of Clc05G10870 vs. ExPASy TrEMBL
Match: A0A1S3AZ47 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484126 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 7.0e-87
Identity = 162/168 (96.43%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPWGIPDDYECEVI 120
           TRHRLKVCQEEEDWE IE+RLGCGQVEELIEEAQDELKLIAKMIEWDPWG+PDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSAKKVETAEKASQVTE 169
           ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDS +KVET EKASQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSTRKVETTEKASQVTE 168

[Close]

BLAST of Clc05G10870 vs. ExPASy TrEMBL
Match: A0A6J1JA00 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111482620 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.0e-86
Identity = 160/168 (95.24%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPWGIPDDYECEVI 120
           T HRLKVCQEEEDWEKIE+RLGCGQVEELIEEAQDELKLIAKMIEWDPWG+PDDYECEVI
Sbjct: 61  TNHRLKVCQEEEDWEKIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSAKKVETAEKASQVTE 169
           ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGD A+KV++AEK SQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDGAQKVDSAEKTSQVTE 168

[Close]

BLAST of Clc05G10870 vs. ExPASy TrEMBL
Match: A0A5D3DH67 (Putative NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G001080 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.3e-85
Identity = 159/165 (96.36%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPWGIPDDYECEVI 120
           TRHRLKVCQEEEDWE IE+RLGCGQVEELIEEAQDELKLIAKMIEWDPWG+PDDYECEVI
Sbjct: 61  TRHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSAKKVETAEKASQ 166
           ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDS +KVET EKASQ
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSTRKVETTEKASQ 165

[Close]

BLAST of Clc05G10870 vs. ExPASy TrEMBL
Match: A0A6J1E8S3 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111430895 PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.6e-85
Identity = 158/168 (94.05%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPWGIPDDYECEVI 120
           T HRLKVCQEEEDWE IE+RLGCGQVEELIEEAQDELKLIAKMIEWDPWG+PDDYECEVI
Sbjct: 61  TNHRLKVCQEEEDWENIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSAKKVETAEKASQVTE 169
           ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGD A+KV++A+K SQVTE
Sbjct: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDGAQKVDSAKKTSQVTE 168

[Close]

BLAST of Clc05G10870 vs. ExPASy TrEMBL
Match: A0A6J1CII6 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111011683 PE=3 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.5e-84
Identity = 157/168 (93.45%), Postives = 164/168 (97.62%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLR IGRPLLAKVKQTTGIVGL+VVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRVIGRPLLAKVKQTTGIVGLEVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPWGIPDDYECEVI 120
           TRHRLKVCQEE+DWEKIE+RLGCGQVEELIEEAQDELKLIAKMIEWDPWG+PDDYECEVI
Sbjct: 61  TRHRLKVCQEEDDWEKIEKRLGCGQVEELIEEAQDELKLIAKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSAKKVETAEKASQVTE 169
           ENDA VPKH+PLHRPGPLPEEFYKTLEAI G S++KVETAEKASQVTE
Sbjct: 121 ENDASVPKHIPLHRPGPLPEEFYKTLEAIGGGSSQKVETAEKASQVTE 168

[Close]

BLAST of Clc05G10870 vs. TAIR 10
Match: AT5G52840.1 (NADH-ubiquinone oxidoreductase-related )

HSP 1 Score: 281.2 bits (718), Expect = 5.5e-76
Identity = 135/160 (84.38%), Postives = 145/160 (90.62%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MFLRAIGRPLLAKVKQTTGIVGLDVVPNAR VLI LYSKTLKEIQAVPEDEGYRKAVESF
Sbjct: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNARAVLIDLYSKTLKEIQAVPEDEGYRKAVESF 60

Query: 61  TRHRLKVCQEEEDWEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPWGIPDDYECEVI 120
           TR RL VC+EEEDWE IE+RLGCGQVEELIEEA+DEL LI KMIEWDPWG+PDDYECEVI
Sbjct: 61  TRQRLNVCKEEEDWEMIEKRLGCGQVEELIEEARDELTLIGKMIEWDPWGVPDDYECEVI 120

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSAKKVETA 161
           ENDAP+PKHVP HRPGPLPE+FYKTLE +  +S  ++  A
Sbjct: 121 ENDAPIPKHVPQHRPGPLPEQFYKTLEGLIAESKTEIPAA 160

[Close]

BLAST of Clc05G10870 vs. TAIR 10
Match: AT4G28005.1 (BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase-related (TAIR:AT5G52840.1); Has 37 Blast hits to 37 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 111.3 bits (277), Expect = 7.6e-25
Identity = 73/164 (44.51%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 1   MFLRAIGRPLLAKVKQTTGIVGLDVVPNAREVLIGLYSKTLKEIQAVPEDEGYRKAVESF 60
           MF R IGRPLLAKVKQTTGIV                                       
Sbjct: 1   MFQRVIGRPLLAKVKQTTGIV--------------------------------------- 60

Query: 61  TRHRLKVCQEEEDWEKIEQRLGCGQVEELIEEAQDELKLIAKMIEWDPWGIPDDYECEVI 120
                +VC EEEDW  IE+RL CG+VEELIEEA DEL L+ KMI              +I
Sbjct: 61  -----EVCPEEEDWGVIEKRLACGKVEELIEEASDELTLVGKMI--------GSLHPNLI 109

Query: 121 ENDAPVPKHVPLHRPGPLPEEFYKTLEAISGDSAKKVETAEKAS 165
              AP+PKHVP HRPGPLPEEFY+TL+A++ +S  ++ TA  +S
Sbjct: 121 L--APIPKHVPHHRPGPLPEEFYRTLQAVNSESKTEI-TATSSS 109

The following BLAST results are available for this feature:

BLAST of Clc05G10870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874963.1	1.1e-86	97.02	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
XP_008439300.1	1.5e-86	96.43	PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5...	[more]
XP_004140748.1	3.2e-86	95.83	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
XP_023553539.1	5.5e-86	95.83	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
XP_022984248.1	1.2e-85	95.24	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]

BLAST of Clc05G10870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLX7	7.8e-75	84.38	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
Q559Z4	3.0e-18	42.99	Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Dictyos...	[more]
P23935	2.4e-15	43.75	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Bos taurus OX=99...	[more]
Q9CPP6	1.0e-13	42.71	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Mus musculus OX=...	[more]
Q4R5J1	1.3e-13	41.67	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 OS=Macaca fascicula...	[more]

BLAST of Clc05G10870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AZ47	7.0e-87	96.43	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
A0A6J1JA00	6.0e-86	95.24	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
A0A5D3DH67	2.3e-85	96.36	Putative NADH dehydrogenase (Ubiquinone) 1 alpha subcomplex subunit 5 OS=Cucumis...	[more]
A0A6J1E8S3	6.6e-85	94.05	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]
A0A6J1CII6	2.5e-84	93.45	probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochond...	[more]

BLAST of Clc05G10870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52840.1	5.5e-76	84.38	NADH-ubiquinone oxidoreductase-related	[more]
AT4G28005.1	7.6e-25	44.51	BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase-relat...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006806	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	PFAM	PF04716	ETC_C1_NDUFA5	coord: 22..88 e-value: 8.7E-28 score: 95.9
IPR006806	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	PANTHER	PTHR12653	NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-B SUBUNIT	coord: 1..164
None	No IPR available	PANTHER	PTHR12653:SF1	BNAA02G10640D PROTEIN	coord: 1..164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc05G10870.1	Clc05G10870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022904	respiratory electron transport chain
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045271	respiratory chain complex I