Clc05G07750 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGCAATGTCGTTAGTAAGAGACTTGAGCACACCAGATAAAACCCCTAATTTGATCAGTGTCTCTTCGACTTCGGTCACGTATTTTTAGTCTTTGCTTTTCTCTATTTCAAACCTAAAAAGAAACATATTTGTATTGAAAAACGCGGTTGCTCAGAAACTCAAAAGGAAATGATAGAAGAAAGGCAAGGCGGAGCTCCCCACGCCATTCTACTGGCGGTGGTCGTCGCCATCGTCATCGTCGTCCCTTTCCTCCTCGGCGACCAAGGCGAGGCCCTCACCGAAGCCATTTCCGACCTCCTAAGCCCCTTCGGTCTCCTACTCCTCCCCATCCTCCTCCTTCTCACCATCCAGTTCCTCTCCTCCGATCGCGGCTCCTTCGTCTCCGCCATCTTCTCCTCCGGCGAGCCTGACTCCATCCACCGCGTCACTGGATCCCCCGTCGGCGTTGCTCTTTTCCTCGTTCTCATTCTCTTTCTCCTCTACAATCGGATTTCCATCTTCGGCGGCGACGATGATTCCGGCGACTGAAATTGTTTGTTAGTAACTTAGATCTATCTTTTCTGCGATTTGTTCTTCTTCCATGCCTTGTGTTTTTTCTTTTTTTTAGTGTATTGTGTAAAGCTTGCTGGATGAACGAGGAGGAGTGGGTTATAATTTACATGTATGCCCCTGAGAGATGGAGTGTTTTGATTGGTGGAATGAAATATCCAAATTTCGAAATTGCCCTTAATTTGCTGTCTTCTTGCTTTCCTATTGGTTTCTGACTTTCTAGGTCGTTTTCATTGAGGACAATTTCGTCATTTTGTATCCCCTGAAAAAGTAGTTCAATCGGTTCAGAATTTTTGTTTGATTGTCGGCGATCGGCGGTGGCCTTTTACTTCTTCTTCTTCTTCTCCATCATCATCATAGTCTCTCAGTGAACATTATTTTTATGTTTGTTTATGGAGTTTTTGAATCAAATTTCTGCATGCAATTTTGGAAGAAAAGGGATGGGAATCTAGTAGTGTGAGTGTGATGAGATCTGAGTGTTTTTTAAAAATTATTATTGGTTGGAGTTGTTTAAATTATTTGAATGAAGTGAAGGCGATGGGAGGTGGAAGTTGGTCGGCGGCGATGGGTGCCGGCGAGTGTCAGAGAAGCATGTGAGGGTGGAATCTGTTGTTGTATTTGTATATGTGTTGAAGAGAGATTGTGTGGGGTGTGGGGATGCTGATATTTCTCTCTTCTGTCCAATTTCCGCCATTAAATGTTTTACTGTTTT GAGCAATGTCGTTAGTAAGAGACTTGAGCACACCAGATAAAACCCCTAATTTGATCAGTGTCTCTTCGACTTCGGTCACGTATTTTTAGTCTTTGCTTTTCTCTATTTCAAACCTAAAAAGAAACATATTTGTATTGAAAAACGCGGTTGCTCAGAAACTCAAAAGGAAATGATAGAAGAAAGGCAAGGCGGAGCTCCCCACGCCATTCTACTGGCGGTGGTCGTCGCCATCGTCATCGTCGTCCCTTTCCTCCTCGGCGACCAAGGCGAGGCCCTCACCGAAGCCATTTCCGACCTCCTAAGCCCCTTCGGTCTCCTACTCCTCCCCATCCTCCTCCTTCTCACCATCCAGTTCCTCTCCTCCGATCGCGGCTCCTTCGTCTCCGCCATCTTCTCCTCCGGCGAGCCTGACTCCATCCACCGCGTCACTGGATCCCCCGTCGGCGTTGCTCTTTTCCTCGTTCTCATTCTCTTTCTCCTCTACAATCGGATTTCCATCTTCGGCGGCGACGATGATTCCGGCGACTGAAATTGTTTGTTAGTAACTTAGATCTATCTTTTCTGCGATTTGTTCTTCTTCCATGCCTTGTGTTTTTTCTTTTTTTTAGTGTATTGTGTAAAGCTTGCTGGATGAACGAGGAGGAGTGGGTTATAATTTACATGTATGCCCCTGAGAGATGGAGTGTTTTGATTGGTGGAATGAAATATCCAAATTTCGAAATTGCCCTTAATTTGCTGTCTTCTTGCTTTCCTATTGGTTTCTGACTTTCTAGGTCGTTTTCATTGAGGACAATTTCGTCATTTTGTATCCCCTGAAAAAGTAGTTCAATCGGTTCAGAATTTTTGTTTGATTGTCGGCGATCGGCGGTGGCCTTTTACTTCTTCTTCTTCTTCTCCATCATCATCATAGTCTCTCAGTGAACATTATTTTTATGTTTGTTTATGGAGTTTTTGAATCAAATTTCTGCATGCAATTTTGGAAGAAAAGGGATGGGAATCTAGTAGTGTGAGTGTGATGAGATCTGAGTGTTTTTTAAAAATTATTATTGGTTGGAGTTGTTTAAATTATTTGAATGAAGTGAAGGCGATGGGAGGTGGAAGTTGGTCGGCGGCGATGGGTGCCGGCGAGTGTCAGAGAAGCATGTGAGGGTGGAATCTGTTGTTGTATTTGTATATGTGTTGAAGAGAGATTGTGTGGGGTGTGGGGATGCTGATATTTCTCTCTTCTGTCCAATTTCCGCCATTAAATGTTTTACTGTTTT ATGATAGAAGAAAGGCAAGGCGGAGCTCCCCACGCCATTCTACTGGCGGTGGTCGTCGCCATCGTCATCGTCGTCCCTTTCCTCCTCGGCGACCAAGGCGAGGCCCTCACCGAAGCCATTTCCGACCTCCTAAGCCCCTTCGGTCTCCTACTCCTCCCCATCCTCCTCCTTCTCACCATCCAGTTCCTCTCCTCCGATCGCGGCTCCTTCGTCTCCGCCATCTTCTCCTCCGGCGAGCCTGACTCCATCCACCGCGTCACTGGATCCCCCGTCGGCGTTGCTCTTTTCCTCGTTCTCATTCTCTTTCTCCTCTACAATCGGATTTCCATCTTCGGCGGCGACGATGATTCCGGCGACTGA MIEERQGGAPHAILLAVVVAIVIVVPFLLGDQGEALTEAISDLLSPFGLLLLPILLLLTIQFLSSDRGSFVSAIFSSGEPDSIHRVTGSPVGVALFLVLILFLLYNRISIFGGDDDSGD Homology
BLAST of Clc05G07750 vs. NCBI nr
Match: XP_004134216.1 (uncharacterized protein LOC101205160 [Cucumis sativus] >XP_008438893.1 PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103483850 [Cucumis melo] >KAA0049502.1 hypothetical protein E6C27_scaffold171G007560 [Cucumis melo var. makuwa] >TYK16182.1 hypothetical protein E5676_scaffold209G001100 [Cucumis melo var. makuwa]) HSP 1 Score: 222.2 bits (565), Expect = 2.3e-54 Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Clc05G07750 vs. NCBI nr
Match: XP_038899735.1 (uncharacterized protein LOC120086972 [Benincasa hispida]) HSP 1 Score: 221.1 bits (562), Expect = 5.2e-54 Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0
BLAST of Clc05G07750 vs. NCBI nr
Match: XP_022137815.1 (uncharacterized protein LOC111009160 [Momordica charantia]) HSP 1 Score: 212.2 bits (539), Expect = 2.4e-51 Identity = 109/119 (91.60%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of Clc05G07750 vs. NCBI nr
Match: XP_022937994.1 (uncharacterized protein LOC111444213 [Cucurbita moschata] >XP_022973717.1 uncharacterized protein LOC111472294 [Cucurbita maxima] >XP_023522113.1 uncharacterized protein LOC111785989 [Cucurbita pepo subsp. pepo] >XP_023539949.1 uncharacterized protein LOC111800474 [Cucurbita pepo subsp. pepo] >KAG6597528.1 hypothetical protein SDJN03_10708, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028985.1 hypothetical protein SDJN02_10168, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 209.9 bits (533), Expect = 1.2e-50 Identity = 114/119 (95.80%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of Clc05G07750 vs. NCBI nr
Match: XP_028786850.1 (uncharacterized protein LOC114742804 [Prosopis alba] >XP_028796305.1 uncharacterized protein LOC114751800 [Prosopis alba]) HSP 1 Score: 208.0 bits (528), Expect = 4.5e-50 Identity = 104/119 (87.39%), Postives = 117/119 (98.32%), Query Frame = 0
BLAST of Clc05G07750 vs. ExPASy TrEMBL
Match: A0A5A7U157 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001100 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.1e-54 Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Clc05G07750 vs. ExPASy TrEMBL
Match: A0A0A0L5U0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154405 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.1e-54 Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Clc05G07750 vs. ExPASy TrEMBL
Match: A0A1S3AY58 (LOW QUALITY PROTEIN: uncharacterized protein LOC103483850 OS=Cucumis melo OX=3656 GN=LOC103483850 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.1e-54 Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Clc05G07750 vs. ExPASy TrEMBL
Match: A0A6J1C7Q9 (uncharacterized protein LOC111009160 OS=Momordica charantia OX=3673 GN=LOC111009160 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 1.2e-51 Identity = 109/119 (91.60%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of Clc05G07750 vs. ExPASy TrEMBL
Match: A0A6J1I8A7 (uncharacterized protein LOC111472294 OS=Cucurbita maxima OX=3661 GN=LOC111472294 PE=4 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 5.8e-51 Identity = 114/119 (95.80%), Postives = 115/119 (96.64%), Query Frame = 0
BLAST of Clc05G07750 vs. TAIR 10
Match: AT3G06890.1 (unknown protein; Has 91 Blast hits to 91 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 176.4 bits (446), Expect = 1.4e-44 Identity = 90/113 (79.65%), Postives = 104/113 (92.04%), Query Frame = 0
BLAST of Clc05G07750 vs. TAIR 10
Match: AT2G31940.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 227 Blast hits to 227 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 227; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 8.0e-05 Identity = 33/108 (30.56%), Postives = 57/108 (52.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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