Clc04G13010 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGGAAAAGAGAAAGAAGAAAAGAAAAGAAGAAAGAAAGAAAAGAAAAGGATCCCCCAAAGAGAAATAGAAGGAAGGTTTTGTATATATATCGGGGAAAATGGGGAAGTGAGAAAAGGGTTTGGAGATTAAAGGAAGATAGATAGATAGATATAATCGAATTAAATGGCGCCAGTGGGGTTGCCTCCGGGGTTCAGGTTCCATCCCACCGACGAAGAGCTCGTCAATTACTATCTCAAGAGGAAGATCAGTGGCCAAGAAATCGAGCTTGATATCATTCCGGAGGTGGATCTCTACAAATGCGAGCCTTGGGAATTATCAGGTACCTTCATTTGTTTCCCATTTTTAGTTTACAAATTATAAATTAATAATAATGATGTTATGTGTTTTGATTTGTAGAAAAGTCGTTTCTTCCAAGTAGAGACCCAGAATGGTACTTCTTTGGGCCCAGAGATAGAAAATATCCAAATGGGTTCAGAACAAACAGAGCCACAAGAGCGGGGTATTGGAAATCCACCGGAAAAGACCGGCGAGTGAGTTCACAAAACCGAGCCATTGGGATGAAGAAGACGCTTGTTTACTACAGAGGCCGAGCCCCTCAAGGCATTCGAACCGACTGGGTCATGCATGAATATCGCCTCGACGACAAGGATTGCGAGGACAGCTCTGGCATTCAGGTAGCACCTAATCTTCCACGTACATAATACAACAACAACAACAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCAAAATAATTCAACTTAAAAATATATATATAATTTGAATTAATTTTTCCAATTTTGAATTTTATCTCTTTCTTTTTCCTTTCTTTTTCCCATGCACAATGATTATATTACCACCTTCTTTGTATCTTCTTTTCTTTTTTGCTCTTTTGATTTTTGTTTCTTTGCAATCATATTCTCTTCTTTAGAATTTTTATGATTGGTTTTAAAAGAACATCAACCATCAGAAGAAGAGAACATCGACAAAGATTTTTTTGCTCCACTTTTTTTTTTTTCTTCTCTGCCACTCGTCACTTTTAATTTCTTTTGCATTGTTGGGGATAGAAAGCTCCATAACATAAAGTTTGGCTATATATATATATATATATACACACATTATATTCTTCCAACTTCCTAAGCCAACCCTAAAACTCTACTCTATGGTGTTAAATCAAAGGACTTCACCCAAAGTTGTTATACGTTCACCCTCGTCCACCATTTAAATTTTAAACTCACGTTAACTCACTCTTTCTAAAGTTTAGGTGTTTACTGAACTGCACTTTATCTCTTTGCATGACAGTTGTTTAAGAAACTTACACGTAACATTTTTGTGTTTTTCTTAAAAAGAAAAAAACGATTTAAATTTTTTTTCTTTTCTGGGGAGTATTTTTCTTTAATATCTATTTTTAAGGCTGAATAATTTGATATCTAAACTTTATTTATTTATTTATTATTATTATTTTTTTTAACAATGATATCTAAACTTTTAGGATCATGTCTATACTATGTCCATGATGCCATTAAACTTTAAAAAATATTTATTATGTTTCTAGTTTTGTTTAACACGTTTCTAAATCTAAATATTGGATTTCTTAGATTAAAAATTAAAAGTTTAGACATTATGTTAGACAAGATGTTAAACATTTATTGAAGTTAAGAAATAACTTATTTGATTGTAGATCGAAAATTGAAAATTTAGTAAACATATTAGGCACTAAACAGTTCACTCATTATAATAATAAAACATATATAGCAATATTGTGCATATTTGAACTAATAATATGTTAATTTTTCTCTCTTACTCTAACTAAAATAGACATAATTAGTTACCAATTTGAGCCAAACTTAGTTGGTCCAAAATGTTGTGCGGAATTAAAAGAAAGTGATAGGTAGTTACTGACAGTTTTTCTTTTTGTTTCTTCAATATGTAATGTAATAATATGAGTAGAATGAATTTGAGAGTAGGAAGAAGACTTGAAAAAAATAAAAAGAAAAAAGAAAGTCCATTTAGAGGCAAACATGATAAAAAGAAATGAGTGGCATACATATTCTTTACTTGTACCAGGATCTTTCAAGTCATAAAGTTGAGTTTGGCTTTTGTTTTCTTATGGCAAATGAGACAAAAGTGCCATCCCCTATGACTTAAAACACACACACACACACACACACACAACCTGTTATTTGATTTTAATATATTCCATCTTTCCAGCATTTTAGATGATCTATTTTATTATGAAAGTTGGATTCCCTCATATCATTAGAAAAATAAAAAATTAAATAAATTAGCTAGAGAGAGAGTAAGGCAAAAGAAGAGTCCCCCATCATTTGCTTTTTTTTTTTTTTTTTTAGTTGTAAGAAGATGTCTCTCACTTTTCACTTTTCACTTTATTCCATCACTAAAATCACCCAATGGATCTCTCTTTGTCCACGGGTTTCGTTCAACGTGTGACACATACAACTTACTCTTTCTAAAGTTTTCACCATTAATTACATTCCTCTATTTGATATCAACTTATCTTAGATCATATGTATATGCTTAAACAAGTTGAACGATGCTAAGTTTAAGTGCAACAGTTAGTGAATCAAAAGCTGAAATTAAAAATACAAAGCAGAAGAAAAGAGAGATGAAAATTGCAAGTGTTTTTGTTTTTGTTTTTGTTTATTGGGTTGCAGGATTCTTACGCCTTGTGTAGAGTATTCAAGAAAAATGGAATATGTTCGGAAGTGGAAGAACAATTAGTAGGTGGACAAAGCAGCAGCTTATCATTTATGGAGAACTCAAACTCAACATCACATTCACAAACTTTGGTCAATGATTACGAAACTTTATCACCTGATATTCTGATGGCAGCTTCATCTTCTTGTGTGGAGGAAGAAGAAAAGGACGATTCATGGATGCAATTCATTACAGAAGATGCATGGTGTGCTTCCAATTCATCAGCCATCGGCCTCGACGACCTCTCTCACTTGACTTTCACCAATTGAAACTCATATTGCTTCCTAATAATTTTATAGATTTAATGGTCCGTATATTTTTTCTTTACTATAATAATTTATACGAACGACATGTATCTCTCTCTCTCTCTGCATATATATATATATATATATACATATACATACAAGTTGATGGGATTGGGAAGAAAGAGTGAGGAGAAGGGTGGTGAGATTTGTCAATTTCCATCTGTAGATTATGTATTTTGGATTGTGGGTGTGGTTGGTGACTTCTGTAGGGTCGAATTTAATCAAGTAGAAACAAGACCTCTATGGAATATATTTTGATTTCACCTTTTCCCGGTGAATTATCTCTCATCTTTGGCCTCTGGGTGTTACTTCAATAAAAAGAACATCATATATATACTCATTCCTTT CTGGAAAAGAGAAAGAAGAAAAGAAAAGAAGAAAGAAAGAAAAGAAAAGGATCCCCCAAAGAGAAATAGAAGGAAGGTTTTGTATATATATCGGGGAAAATGGGGAAGTGAGAAAAGGGTTTGGAGATTAAAGGAAGATAGATAGATAGATATAATCGAATTAAATGGCGCCAGTGGGGTTGCCTCCGGGGTTCAGGTTCCATCCCACCGACGAAGAGCTCGTCAATTACTATCTCAAGAGGAAGATCAGTGGCCAAGAAATCGAGCTTGATATCATTCCGGAGGTGGATCTCTACAAATGCGAGCCTTGGGAATTATCAGAAAAGTCGTTTCTTCCAAGTAGAGACCCAGAATGGTACTTCTTTGGGCCCAGAGATAGAAAATATCCAAATGGGTTCAGAACAAACAGAGCCACAAGAGCGGGGTATTGGAAATCCACCGGAAAAGACCGGCGAGTGAGTTCACAAAACCGAGCCATTGGGATGAAGAAGACGCTTGTTTACTACAGAGGCCGAGCCCCTCAAGGCATTCGAACCGACTGGGTCATGCATGAATATCGCCTCGACGACAAGGATTGCGAGGACAGCTCTGGCATTCAGGATTCTTACGCCTTGTGTAGAGTATTCAAGAAAAATGGAATATGTTCGGAAGTGGAAGAACAATTAGTAGGTGGACAAAGCAGCAGCTTATCATTTATGGAGAACTCAAACTCAACATCACATTCACAAACTTTGGTCAATGATTACGAAACTTTATCACCTGATATTCTGATGGCAGCTTCATCTTCTTGTGTGGAGGAAGAAGAAAAGGACGATTCATGGATGCAATTCATTACAGAAGATGCATGGTGTGCTTCCAATTCATCAGCCATCGGCCTCGACGACCTCTCTCACTTGACTTTCACCAATTGAAACTCATATTGCTTCCTAATAATTTTATAGATTTAATGGTCCGTATATTTTTTCTTTACTATAATAATTTATACGAACGACATGTATCTCTCTCTCTCTCTGCATATATATATATATATATATACATATACATACAAGTTGATGGGATTGGGAAGAAAGAGTGAGGAGAAGGGTGGTGAGATTTGTCAATTTCCATCTGTAGATTATGTATTTTGGATTGTGGGTGTGGTTGGTGACTTCTGTAGGGTCGAATTTAATCAAGTAGAAACAAGACCTCTATGGAATATATTTTGATTTCACCTTTTCCCGGTGAATTATCTCTCATCTTTGGCCTCTGGGTGTTACTTCAATAAAAAGAACATCATATATATACTCATTCCTTT ATGGCGCCAGTGGGGTTGCCTCCGGGGTTCAGGTTCCATCCCACCGACGAAGAGCTCGTCAATTACTATCTCAAGAGGAAGATCAGTGGCCAAGAAATCGAGCTTGATATCATTCCGGAGGTGGATCTCTACAAATGCGAGCCTTGGGAATTATCAGAAAAGTCGTTTCTTCCAAGTAGAGACCCAGAATGGTACTTCTTTGGGCCCAGAGATAGAAAATATCCAAATGGGTTCAGAACAAACAGAGCCACAAGAGCGGGGTATTGGAAATCCACCGGAAAAGACCGGCGAGTGAGTTCACAAAACCGAGCCATTGGGATGAAGAAGACGCTTGTTTACTACAGAGGCCGAGCCCCTCAAGGCATTCGAACCGACTGGGTCATGCATGAATATCGCCTCGACGACAAGGATTGCGAGGACAGCTCTGGCATTCAGGATTCTTACGCCTTGTGTAGAGTATTCAAGAAAAATGGAATATGTTCGGAAGTGGAAGAACAATTAGTAGGTGGACAAAGCAGCAGCTTATCATTTATGGAGAACTCAAACTCAACATCACATTCACAAACTTTGGTCAATGATTACGAAACTTTATCACCTGATATTCTGATGGCAGCTTCATCTTCTTGTGTGGAGGAAGAAGAAAAGGACGATTCATGGATGCAATTCATTACAGAAGATGCATGGTGTGCTTCCAATTCATCAGCCATCGGCCTCGACGACCTCTCTCACTTGACTTTCACCAATTGA MAPVGLPPGFRFHPTDEELVNYYLKRKISGQEIELDIIPEVDLYKCEPWELSEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSSQNRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKDCEDSSGIQDSYALCRVFKKNGICSEVEEQLVGGQSSSLSFMENSNSTSHSQTLVNDYETLSPDILMAASSSCVEEEEKDDSWMQFITEDAWCASNSSAIGLDDLSHLTFTN Homology
BLAST of Clc04G13010 vs. NCBI nr
Match: XP_038895462.1 (NAC domain-containing protein 86 [Benincasa hispida]) HSP 1 Score: 501.9 bits (1291), Expect = 3.2e-138 Identity = 245/248 (98.79%), Postives = 245/248 (98.79%), Query Frame = 0
BLAST of Clc04G13010 vs. NCBI nr
Match: XP_008439242.1 (PREDICTED: NAC domain-containing protein 86 [Cucumis melo]) HSP 1 Score: 498.4 bits (1282), Expect = 3.5e-137 Identity = 245/250 (98.00%), Postives = 245/250 (98.00%), Query Frame = 0
BLAST of Clc04G13010 vs. NCBI nr
Match: XP_004137396.1 (NAC domain-containing protein 86 [Cucumis sativus] >KGN63971.1 hypothetical protein Csa_013549 [Cucumis sativus]) HSP 1 Score: 498.0 bits (1281), Expect = 4.6e-137 Identity = 245/250 (98.00%), Postives = 245/250 (98.00%), Query Frame = 0
BLAST of Clc04G13010 vs. NCBI nr
Match: XP_022998740.1 (NAC domain-containing protein 86-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 483.0 bits (1242), Expect = 1.5e-132 Identity = 236/248 (95.16%), Postives = 241/248 (97.18%), Query Frame = 0
BLAST of Clc04G13010 vs. NCBI nr
Match: XP_022949589.1 (NAC domain-containing protein 86-like isoform X1 [Cucurbita moschata] >XP_023523518.1 NAC domain-containing protein 86-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 481.1 bits (1237), Expect = 5.8e-132 Identity = 235/248 (94.76%), Postives = 240/248 (96.77%), Query Frame = 0
BLAST of Clc04G13010 vs. ExPASy Swiss-Prot
Match: Q9FFI5 (NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.8e-72 Identity = 141/237 (59.49%), Postives = 168/237 (70.89%), Query Frame = 0
BLAST of Clc04G13010 vs. ExPASy Swiss-Prot
Match: A4VCM0 (NAC domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=NAC045 PE=2 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 5.3e-72 Identity = 126/167 (75.45%), Postives = 144/167 (86.23%), Query Frame = 0
BLAST of Clc04G13010 vs. ExPASy Swiss-Prot
Match: Q9LS24 (NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 8.8e-59 Identity = 110/187 (58.82%), Postives = 142/187 (75.94%), Query Frame = 0
BLAST of Clc04G13010 vs. ExPASy Swiss-Prot
Match: O49697 (NAC domain-containing protein 71 OS=Arabidopsis thaliana OX=3702 GN=NAC071 PE=2 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 2.0e-55 Identity = 115/226 (50.88%), Postives = 150/226 (66.37%), Query Frame = 0
BLAST of Clc04G13010 vs. ExPASy Swiss-Prot
Match: Q84K00 (NAC domain-containing protein 78 OS=Arabidopsis thaliana OX=3702 GN=NAC078 PE=2 SV=2) HSP 1 Score: 211.8 bits (538), Expect = 8.5e-54 Identity = 95/161 (59.01%), Postives = 121/161 (75.16%), Query Frame = 0
BLAST of Clc04G13010 vs. ExPASy TrEMBL
Match: A0A1S3AYC8 (NAC domain-containing protein 86 OS=Cucumis melo OX=3656 GN=LOC103484068 PE=4 SV=1) HSP 1 Score: 498.4 bits (1282), Expect = 1.7e-137 Identity = 245/250 (98.00%), Postives = 245/250 (98.00%), Query Frame = 0
BLAST of Clc04G13010 vs. ExPASy TrEMBL
Match: A0A0A0LVE2 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G032410 PE=4 SV=1) HSP 1 Score: 498.0 bits (1281), Expect = 2.2e-137 Identity = 245/250 (98.00%), Postives = 245/250 (98.00%), Query Frame = 0
BLAST of Clc04G13010 vs. ExPASy TrEMBL
Match: A0A6J1KDB6 (NAC domain-containing protein 86-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493315 PE=4 SV=1) HSP 1 Score: 483.0 bits (1242), Expect = 7.3e-133 Identity = 236/248 (95.16%), Postives = 241/248 (97.18%), Query Frame = 0
BLAST of Clc04G13010 vs. ExPASy TrEMBL
Match: A0A6J1GD97 (NAC domain-containing protein 86-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452899 PE=4 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 2.8e-132 Identity = 235/248 (94.76%), Postives = 240/248 (96.77%), Query Frame = 0
BLAST of Clc04G13010 vs. ExPASy TrEMBL
Match: A0A6J1KPL4 (NAC domain-containing protein 86 OS=Cucurbita maxima OX=3661 GN=LOC111495360 PE=4 SV=1) HSP 1 Score: 466.1 bits (1198), Expect = 9.3e-128 Identity = 230/249 (92.37%), Postives = 234/249 (93.98%), Query Frame = 0
BLAST of Clc04G13010 vs. TAIR 10
Match: AT3G17730.1 (NAC domain containing protein 57 ) HSP 1 Score: 388.3 bits (996), Expect = 4.7e-108 Identity = 191/243 (78.60%), Postives = 215/243 (88.48%), Query Frame = 0
BLAST of Clc04G13010 vs. TAIR 10
Match: AT1G65910.1 (NAC domain containing protein 28 ) HSP 1 Score: 288.1 bits (736), Expect = 6.7e-78 Identity = 140/238 (58.82%), Postives = 180/238 (75.63%), Query Frame = 0
BLAST of Clc04G13010 vs. TAIR 10
Match: AT5G17260.1 (NAC domain containing protein 86 ) HSP 1 Score: 273.9 bits (699), Expect = 1.3e-73 Identity = 141/237 (59.49%), Postives = 168/237 (70.89%), Query Frame = 0
BLAST of Clc04G13010 vs. TAIR 10
Match: AT3G03200.1 (NAC domain containing protein 45 ) HSP 1 Score: 272.3 bits (695), Expect = 3.8e-73 Identity = 126/167 (75.45%), Postives = 144/167 (86.23%), Query Frame = 0
BLAST of Clc04G13010 vs. TAIR 10
Match: AT1G54330.1 (NAC domain containing protein 20 ) HSP 1 Score: 253.8 bits (647), Expect = 1.4e-67 Identity = 133/248 (53.63%), Postives = 162/248 (65.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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