Clc04G10800 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc04G10800
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	zinc-finger homeodomain protein 9-like
Location	ClcChr04: 24342630 .. 24343457 (-)
RNA-Seq Expression	Clc04G10800
Synteny	Clc04G10800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCAAAGTTGAGCCAACCTCTCTCATTAGGGCTTGTTTGGCATCCCCAAAAAGCACCATATCCCATTATATACTCAATCAAACAAATCAAAACTCCCACACACAAAATTAAGAAGAAAATGGACGGAGAGAACTCAAACTATCATTACAGAGAATGCCTTCGGAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACTCTCGACGACGCTTCTTCTCCGGCCAACCTCCTCCACTGCGCCGCCTGTGGCTGCCACCGTAACTTCCACCGCAAAGTCACCTACATCGCCGGTGGCGGCCGCTCCTCCGCCGCTACCGCCACCGACGACGACCTCATGGATTACGACCGCCACGCCGTCGTTGAGTACGGCGCTACCGACACGGAGAGAAGCGGCGGCGGGGGAAGCAAAAAACGGTTCCGTACGAAGTTCACCGCGGATCAGAAAGAGAAGATGCTGGCATTTGCTGAGAAATTAGGTTGGAAGTTGCAGAGAAAAGATCTCGACGACGAGATCGAGAGGTTCTGCCGGAGCGTGGGCGTCACTCGCCAAGTTTTCAAGGTTTGGATGCATAATCACAAGAATTCTTTTTCTTCTAATTCTGCATCCACCGGAAATGCCTCTTCTCTAACACAGTAATTAAAGATTAATTGATTTAATTAATTGATCTTTGTTAATGTGATAAATTAGAGTAGAATAAGAGGCCTAATTTTTCTTCCTTTACAGATCCCTTTGTTATTCTTCCTAAAAAGGGTCTACTCTATATATCAGTATATCGGCTTTTTATTGTAATATATAAACTAATTTTCTT

mRNA sequence

ATCCAAAGTTGAGCCAACCTCTCTCATTAGGGCTTGTTTGGCATCCCCAAAAAGCACCATATCCCATTATATACTCAATCAAACAAATCAAAACTCCCACACACAAAATTAAGAAGAAAATGGACGGAGAGAACTCAAACTATCATTACAGAGAATGCCTTCGGAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACTCTCGACGACGCTTCTTCTCCGGCCAACCTCCTCCACTGCGCCGCCTGTGGCTGCCACCGTAACTTCCACCGCAAAGTCACCTACATCGCCGGTGGCGGCCGCTCCTCCGCCGCTACCGCCACCGACGACGACCTCATGGATTACGACCGCCACGCCGTCGTTGAGTACGGCGCTACCGACACGGAGAGAAGCGGCGGCGGGGGAAGCAAAAAACGGTTCCGTACGAAGTTCACCGCGGATCAGAAAGAGAAGATGCTGGCATTTGCTGAGAAATTAGGTTGGAAGTTGCAGAGAAAAGATCTCGACGACGAGATCGAGAGGTTCTGCCGGAGCGTGGGCGTCACTCGCCAAGTTTTCAAGGTTTGGATGCATAATCACAAGAATTCTTTTTCTTCTAATTCTGCATCCACCGGAAATGCCTCTTCTCTAACACAGTAATTAAAGATTAATTGATTTAATTAATTGATCTTTGTTAATGTGATAAATTAGAGTAGAATAAGAGGCCTAATTTTTCTTCCTTTACAGATCCCTTTGTTATTCTTCCTAAAAAGGGTCTACTCTATATATCAGTATATCGGCTTTTTATTGTAATATATAAACTAATTTTCTT

Coding sequence (CDS)

ATGGACGGAGAGAACTCAAACTATCATTACAGAGAATGCCTTCGGAACCATGCAGCCAGTCTCGGCAGTTACGCCACCGACGGCTGCGGCGAATTCACTCTCGACGACGCTTCTTCTCCGGCCAACCTCCTCCACTGCGCCGCCTGTGGCTGCCACCGTAACTTCCACCGCAAAGTCACCTACATCGCCGGTGGCGGCCGCTCCTCCGCCGCTACCGCCACCGACGACGACCTCATGGATTACGACCGCCACGCCGTCGTTGAGTACGGCGCTACCGACACGGAGAGAAGCGGCGGCGGGGGAAGCAAAAAACGGTTCCGTACGAAGTTCACCGCGGATCAGAAAGAGAAGATGCTGGCATTTGCTGAGAAATTAGGTTGGAAGTTGCAGAGAAAAGATCTCGACGACGAGATCGAGAGGTTCTGCCGGAGCGTGGGCGTCACTCGCCAAGTTTTCAAGGTTTGGATGCATAATCACAAGAATTCTTTTTCTTCTAATTCTGCATCCACCGGAAATGCCTCTTCTCTAACACAGTAA

Protein sequence

MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVTYIAGGGRSSAATATDDDLMDYDRHAVVEYGATDTERSGGGGSKKRFRTKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ

Homology

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BLAST of Clc04G10800 vs. NCBI nr
Match: XP_038895089.1 (zinc-finger homeodomain protein 9-like [Benincasa hispida])

HSP 1 Score: 356.3 bits (913), Expect = 1.5e-94
Identity = 175/179 (97.77%), Postives = 176/179 (98.32%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVT 60
           M+GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MEGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYGATDTERS-GGGGSKKRFRTKFTADQKEKML 120
           YIAGGGRSSAATATDDDLMDYDRHAVVEY A DTERS GGGGSKKRFRTKFTADQKEKML
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGGGSKKRFRTKFTADQKEKML 120

Query: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 179
           AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 179

[Close]

BLAST of Clc04G10800 vs. NCBI nr
Match: XP_008467173.1 (PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis melo])

HSP 1 Score: 355.1 bits (910), Expect = 3.4e-94
Identity = 174/179 (97.21%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIA-GGGRSSAATATDDDLMDYDRHAVVEYGATDTERSGGGGSKKRFRTKFTADQKEKML 120
           YIA GGGRSSAATATDDDLMDYDRHAVVEY A DTERSGGGGSKKRFRTKFT DQKEKML
Sbjct: 61  YIAGGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGGSKKRFRTKFTVDQKEKML 120

Query: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 179
           AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 179

[Close]

BLAST of Clc04G10800 vs. NCBI nr
Match: XP_004137520.1 (zinc-finger homeodomain protein 9 [Cucumis sativus] >KGN64200.1 hypothetical protein Csa_014376 [Cucumis sativus])

HSP 1 Score: 354.4 bits (908), Expect = 5.8e-94
Identity = 174/178 (97.75%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYGATDTERSGGGGSKKRFRTKFTADQKEKMLA 120
           YIAGGGRSSAATATDDDLMDYDRHAVVEY A DTERS GGGSKKRFRTKFTADQKEKMLA
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERS-GGGSKKRFRTKFTADQKEKMLA 120

Query: 121 FAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 179
           FAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 FAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 177

[Close]

BLAST of Clc04G10800 vs. NCBI nr
Match: XP_022924045.1 (zinc-finger homeodomain protein 8-like [Cucurbita moschata] >XP_023001812.1 zinc-finger homeodomain protein 8-like [Cucurbita maxima] >XP_023519958.1 zinc-finger homeodomain protein 8-like [Cucurbita pepo subsp. pepo] >KAG6584298.1 Zinc-finger homeodomain protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019891.1 Zinc-finger homeodomain protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318.2 bits (814), Expect = 4.6e-83
Identity = 160/178 (89.89%), Postives = 164/178 (92.13%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD SSP N LHC ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYGATDTERSGGGGSKKRFRTKFTADQKEKMLA 120
           YIAGGGRSSAATA  DDLMDYD+       ATDTERSGGGG KKRFRTKFTADQ+EKMLA
Sbjct: 61  YIAGGGRSSAATA--DDLMDYDQ------AATDTERSGGGG-KKRFRTKFTADQREKMLA 120

Query: 121 FAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 179
           FAEKLGWKLQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 FAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 169

[Close]

BLAST of Clc04G10800 vs. NCBI nr
Match: XP_023542338.1 (zinc-finger homeodomain protein 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311.6 bits (797), Expect = 4.3e-81
Identity = 150/177 (84.75%), Postives = 160/177 (90.40%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVT 60
           MDGENS+YHYRECLRNHAA+LGSYATDGCGEFTLDD SSPAN L+CAAC CHRNFHRKVT
Sbjct: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACSCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYGATDTERSGGGGSKKRFRTKFTADQKEKMLA 120
           YI GGGR S+A  T D+LMDYDRHA+VEY A DT     GGSKKRFRTKFT DQKEKMLA
Sbjct: 61  YIGGGGRFSSAAPTADNLMDYDRHAIVEYAAADT-----GGSKKRFRTKFTTDQKEKMLA 120

Query: 121 FAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLT 178
           FAE+LGWKLQRKDLD+EIERFCRSVG+TRQVFKVWMHNHKNSFSSNSASTGN SS+T
Sbjct: 121 FAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVT 172

[Close]

BLAST of Clc04G10800 vs. ExPASy Swiss-Prot
Match: A2XLF4 (Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD11 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-35
Identity = 86/183 (46.99%), Postives = 104/183 (56.83%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRK------VTYIA 69
           YREC+RNHAA LG+YA DGC E+T DD   PA LL CAACGCHRNFHRK       T  A
Sbjct: 12  YRECMRNHAAKLGTYANDGCCEYTPDD-GHPAGLL-CAACGCHRNFHRKDFLDGRATAAA 71

Query: 70  GG-GRSSAATAT---------DDDLMDYDRHAVVEYGATDTERSGGGGSKKRFRTKFTAD 129
           GG G +    A              M          G    +  GG G ++R RTKFT +
Sbjct: 72  GGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRTKFTEE 131

Query: 130 QKEKMLAFAEKLGWKLQRKDL-----DDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSA 172
           QK +ML FAE+LGW++ +++      DDE+ RFCR +GV RQVFKVWMHNHK        
Sbjct: 132 QKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHKAGGGGGGG 191

[Close]

BLAST of Clc04G10800 vs. ExPASy Swiss-Prot
Match: Q10DV5 (Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD11 PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-35
Identity = 86/183 (46.99%), Postives = 104/183 (56.83%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRK------VTYIA 69
           YREC+RNHAA LG+YA DGC E+T DD   PA LL CAACGCHRNFHRK       T  A
Sbjct: 12  YRECMRNHAAKLGTYANDGCCEYTPDD-GHPAGLL-CAACGCHRNFHRKDFLDGRATAAA 71

Query: 70  GG-GRSSAATAT---------DDDLMDYDRHAVVEYGATDTERSGGGGSKKRFRTKFTAD 129
           GG G +    A              M          G    +  GG G ++R RTKFT +
Sbjct: 72  GGAGGAGVGVAPMLPAPGGGGPPGYMHMAAMGGAVGGGGGVDGGGGSGGRRRTRTKFTEE 131

Query: 130 QKEKMLAFAEKLGWKLQRKDL-----DDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSA 172
           QK +ML FAE+LGW++ +++      DDE+ RFCR +GV RQVFKVWMHNHK        
Sbjct: 132 QKARMLRFAERLGWRMPKREPGRAPGDDEVARFCREIGVNRQVFKVWMHNHKAGGGGGGG 191

[Close]

BLAST of Clc04G10800 vs. ExPASy Swiss-Prot
Match: Q9SB61 (Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.7e-35
Identity = 81/175 (46.29%), Postives = 99/175 (56.57%), Query Frame = 0


Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVTYI 62
           G  +   YRECL+NHA ++G +A DGC EF         + L CAACGCHRNFHRK T  
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101

Query: 63  AGGGRSSAATATDDDLMDYD--------------RHAVVEYGATDTER-SGGGGSKKRFR 122
            GG      T  +     +               R         DT   S  GG+ KRFR
Sbjct: 102 IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFR 161

Query: 123 TKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNS 163
           TKFTA+QKEKMLAFAE+LGW++Q+ D D  +E+FC   GV RQV K+WMHN+KNS
Sbjct: 162 TKFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

[Close]

BLAST of Clc04G10800 vs. ExPASy Swiss-Prot
Match: Q9LHF0 (Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.6e-32
Identity = 82/215 (38.14%), Postives = 116/215 (53.95%), Query Frame = 0


Query: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPAN--LLHCAACGCHRNFHRKVT-- 64
           N+   Y+ECL+NHAA++G +A DGCGEF    +S+P++   L CAACGCHRNFHR+ T  
Sbjct: 47  NNKVTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDD 106

Query: 65  YIAGGGRSSAATATDDDLMDYDRH------------------------------------ 124
             A    S   ++T    ++Y  H                                    
Sbjct: 107 SSAVPPPSLLPSSTTTAAIEYQPHHRHHPPPPLAPPLPRSPNSSSPPPISSSYMLLALSG 166

Query: 125 -------AVVEYGATDTERSGGGGSKKRFRTKFTADQKEKMLAFAEKLGWKLQRKDLDDE 171
                  + + + A     S   GS+KRFRTKF+++QKEKM  FA+++GWK+Q++D +DE
Sbjct: 167 NNKTAPFSDLNFAAAANHLSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRD-EDE 226

[Close]

BLAST of Clc04G10800 vs. ExPASy Swiss-Prot
Match: Q9FKP8 (Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 7.3e-31
Identity = 78/189 (41.27%), Postives = 103/189 (54.50%), Query Frame = 0


Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRK-VTY 62
           G  S + +RECL+N A ++G +A DGCGEF         + L CAACGCHRNFHRK + Y
Sbjct: 68  GGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPY 127

Query: 63  IAGGGRSSAATATDDDLMDYDRHAVVEYGATDT--------------ERS---------- 122
                              Y   A V Y    +              ERS          
Sbjct: 128 FHHAPPQHQPPPPPPGF--YRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSSAE 187

Query: 123 GGGGSKKRFRTKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMH 167
            GGG +KR RTKFTA+QKE+MLA AE++GW++QR+D D+ I+RFC+  GV RQV KVW+H
Sbjct: 188 AGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWLH 247

[Close]

BLAST of Clc04G10800 vs. ExPASy TrEMBL
Match: A0A1S3CU70 (zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103504587 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.7e-94
Identity = 174/179 (97.21%), Postives = 175/179 (97.77%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIA-GGGRSSAATATDDDLMDYDRHAVVEYGATDTERSGGGGSKKRFRTKFTADQKEKML 120
           YIA GGGRSSAATATDDDLMDYDRHAVVEY A DTERSGGGGSKKRFRTKFT DQKEKML
Sbjct: 61  YIAGGGGRSSAATATDDDLMDYDRHAVVEYAAADTERSGGGGSKKRFRTKFTVDQKEKML 120

Query: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 179
           AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 AFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 179

[Close]

BLAST of Clc04G10800 vs. ExPASy TrEMBL
Match: A0A0A0LQK4 (Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus OX=3659 GN=Csa_1G043040 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 2.8e-94
Identity = 174/178 (97.75%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD+SSPANLLHCAACGCHRNFHRKVT
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDSSSPANLLHCAACGCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYGATDTERSGGGGSKKRFRTKFTADQKEKMLA 120
           YIAGGGRSSAATATDDDLMDYDRHAVVEY A DTERS GGGSKKRFRTKFTADQKEKMLA
Sbjct: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYAAADTERS-GGGSKKRFRTKFTADQKEKMLA 120

Query: 121 FAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 179
           FAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 FAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 177

[Close]

BLAST of Clc04G10800 vs. ExPASy TrEMBL
Match: A0A6J1KHP1 (zinc-finger homeodomain protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111495841 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.2e-83
Identity = 160/178 (89.89%), Postives = 164/178 (92.13%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD SSP N LHC ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYGATDTERSGGGGSKKRFRTKFTADQKEKMLA 120
           YIAGGGRSSAATA  DDLMDYD+       ATDTERSGGGG KKRFRTKFTADQ+EKMLA
Sbjct: 61  YIAGGGRSSAATA--DDLMDYDQ------AATDTERSGGGG-KKRFRTKFTADQREKMLA 120

Query: 121 FAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 179
           FAEKLGWKLQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 FAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 169

[Close]

BLAST of Clc04G10800 vs. ExPASy TrEMBL
Match: A0A6J1EDP1 (zinc-finger homeodomain protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC111431593 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.2e-83
Identity = 160/178 (89.89%), Postives = 164/178 (92.13%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVT 60
           MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDD SSP N LHC ACGCHRNFHRK+T
Sbjct: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDTSSPTNNLHCVACGCHRNFHRKIT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYGATDTERSGGGGSKKRFRTKFTADQKEKMLA 120
           YIAGGGRSSAATA  DDLMDYD+       ATDTERSGGGG KKRFRTKFTADQ+EKMLA
Sbjct: 61  YIAGGGRSSAATA--DDLMDYDQ------AATDTERSGGGG-KKRFRTKFTADQREKMLA 120

Query: 121 FAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 179
           FAEKLGWKLQR+DLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ
Sbjct: 121 FAEKLGWKLQRRDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLTQ 169

[Close]

BLAST of Clc04G10800 vs. ExPASy TrEMBL
Match: A0A6J1K6H9 (zinc-finger homeodomain protein 10-like OS=Cucurbita maxima OX=3661 GN=LOC111490534 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.7e-81
Identity = 150/177 (84.75%), Postives = 160/177 (90.40%), Query Frame = 0


Query: 1   MDGENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVT 60
           MDGENS+YHYRECLRNHAA+LGSYATDGCGEFTLDD SSPAN L+CAAC CHRNFHRKVT
Sbjct: 1   MDGENSHYHYRECLRNHAANLGSYATDGCGEFTLDDTSSPANQLYCAACNCHRNFHRKVT 60

Query: 61  YIAGGGRSSAATATDDDLMDYDRHAVVEYGATDTERSGGGGSKKRFRTKFTADQKEKMLA 120
           YI G GR S+A  T D+LMDYDRHA+VEY ATDT     GGSKKRFRTKFT DQKEKMLA
Sbjct: 61  YIGGSGRFSSAAPTADNLMDYDRHAIVEYAATDT-----GGSKKRFRTKFTTDQKEKMLA 120

Query: 121 FAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNSFSSNSASTGNASSLT 178
           FAE+LGWKLQRKDLD+EIERFCRSVG+TRQVFKVWMHNHKNSFSSNSASTGN SS+T
Sbjct: 121 FAERLGWKLQRKDLDEEIERFCRSVGITRQVFKVWMHNHKNSFSSNSASTGNVSSVT 172

[Close]

BLAST of Clc04G10800 vs. TAIR 10
Match: AT4G24660.1 (homeobox protein 22 )

HSP 1 Score: 150.6 bits (379), Expect = 1.2e-36
Identity = 81/175 (46.29%), Postives = 99/175 (56.57%), Query Frame = 0


Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKVTYI 62
           G  +   YRECL+NHA ++G +A DGC EF         + L CAACGCHRNFHRK T  
Sbjct: 42  GVGAKIRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKETES 101

Query: 63  AGGGRSSAATATDDDLMDYD--------------RHAVVEYGATDTER-SGGGGSKKRFR 122
            GG      T  +     +               R         DT   S  GG+ KRFR
Sbjct: 102 IGGRAHRVPTYYNRPPQPHQPPGYLHLTSPAAPYRPPAASGDEEDTSNPSSSGGTTKRFR 161

Query: 123 TKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNS 163
           TKFTA+QKEKMLAFAE+LGW++Q+ D D  +E+FC   GV RQV K+WMHN+KNS
Sbjct: 162 TKFTAEQKEKMLAFAERLGWRIQKHD-DVAVEQFCAETGVRRQVLKIWMHNNKNS 215

[Close]

BLAST of Clc04G10800 vs. TAIR 10
Match: AT3G28920.1 (homeobox protein 34 )

HSP 1 Score: 138.7 bits (348), Expect = 4.7e-33
Identity = 82/215 (38.14%), Postives = 116/215 (53.95%), Query Frame = 0


Query: 5   NSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPAN--LLHCAACGCHRNFHRKVT-- 64
           N+   Y+ECL+NHAA++G +A DGCGEF    +S+P++   L CAACGCHRNFHR+ T  
Sbjct: 47  NNKVTYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDD 106

Query: 65  YIAGGGRSSAATATDDDLMDYDRH------------------------------------ 124
             A    S   ++T    ++Y  H                                    
Sbjct: 107 SSAVPPPSLLPSSTTTAAIEYQPHHRHHPPPPLAPPLPRSPNSSSPPPISSSYMLLALSG 166

Query: 125 -------AVVEYGATDTERSGGGGSKKRFRTKFTADQKEKMLAFAEKLGWKLQRKDLDDE 171
                  + + + A     S   GS+KRFRTKF+++QKEKM  FA+++GWK+Q++D +DE
Sbjct: 167 NNKTAPFSDLNFAAAANHLSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRD-EDE 226

[Close]

BLAST of Clc04G10800 vs. TAIR 10
Match: AT5G65410.1 (homeobox protein 25 )

HSP 1 Score: 135.2 bits (339), Expect = 5.2e-32
Identity = 78/189 (41.27%), Postives = 103/189 (54.50%), Query Frame = 0


Query: 3   GENSNYHYRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRK-VTY 62
           G  S + +RECL+N A ++G +A DGCGEF         + L CAACGCHRNFHRK + Y
Sbjct: 68  GGGSRFRFRECLKNQAVNIGGHAVDGCGEFMPAGIEGTIDALKCAACGCHRNFHRKELPY 127

Query: 63  IAGGGRSSAATATDDDLMDYDRHAVVEYGATDT--------------ERS---------- 122
                              Y   A V Y    +              ERS          
Sbjct: 128 FHHAPPQHQPPPPPPGF--YRLPAPVSYRPPPSQAPPLQLALPPPQRERSEDPMETSSAE 187

Query: 123 GGGGSKKRFRTKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMH 167
            GGG +KR RTKFTA+QKE+MLA AE++GW++QR+D D+ I+RFC+  GV RQV KVW+H
Sbjct: 188 AGGGIRKRHRTKFTAEQKERMLALAERIGWRIQRQD-DEVIQRFCQETGVPRQVLKVWLH 247

[Close]

BLAST of Clc04G10800 vs. TAIR 10
Match: AT2G18350.1 (homeobox protein 24 )

HSP 1 Score: 134.8 bits (338), Expect = 6.8e-32
Identity = 73/180 (40.56%), Postives = 96/180 (53.33%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRK----------- 69
           YREC +NHAAS G +  DGCGEF           L CAAC CHR+FHRK           
Sbjct: 82  YRECQKNHAASSGGHVVDGCGEFMSSGEEGTVESLLCAACDCHRSFHRKEIDGLFVVNFN 141

Query: 70  ----------------VTYIAGGGRSSAATATDDDLMDYDRHAVVEYGATDTERSGGGGS 129
                           +    GGG   AA ++ +DL  + +     +     ++      
Sbjct: 142 SFGHSQRPLGSRHVSPIMMSFGGGGGCAAESSTEDLNKFHQ----SFSGYGVDQFHHYQP 201

Query: 130 KKRFRTKFTADQKEKMLAFAEKLGWKLQRKDLDDEIERFCRSVGVTRQVFKVWMHNHKNS 163
           KKRFRTKF  +QKEKM+ FAEK+GW++ + + DDE+ RFCR + V RQVFKVWMHN+K +
Sbjct: 202 KKRFRTKFNEEQKEKMMEFAEKIGWRMTKLE-DDEVNRFCREIKVKRQVFKVWMHNNKQA 256

[Close]

BLAST of Clc04G10800 vs. TAIR 10
Match: AT1G75240.1 (homeobox protein 33 )

HSP 1 Score: 132.5 bits (332), Expect = 3.4e-31
Identity = 82/224 (36.61%), Postives = 104/224 (46.43%), Query Frame = 0


Query: 10  YRECLRNHAASLGSYATDGCGEFTLDDASSPANLLHCAACGCHRNFHRKV---------- 69
           YRECL+NHAAS+G    DGCGEF           L CAAC CHRNFHRK           
Sbjct: 76  YRECLKNHAASVGGSVHDGCGEFMPSGEEGTIEALRCAACDCHRNFHRKEMDGVGSSDLI 135

Query: 70  -----------TYIAGGGR----------------------------------------- 129
                       Y  GGGR                                         
Sbjct: 136 SHHRHHHYHHNQYGGGGGRRPPPPNMMLNPLMLPPPPNYQPIHHHKYGMSPPGGGGMVTP 195

Query: 130 --------SSAATATDDDLMDYDRHAVVEYGATDTERS-GGGGSKKRFRTKFTADQKEKM 163
                      A ++ +DL  Y + +    GA   + +     SKKRFRTKFT DQKE+M
Sbjct: 196 MSVAYGGGGGGAESSSEDLNLYGQSSGEGAGAAAGQMAFSMSSSKKRFRTKFTTDQKERM 255

The following BLAST results are available for this feature:

BLAST of Clc04G10800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895089.1	1.5e-94	97.77	zinc-finger homeodomain protein 9-like [Benincasa hispida]	[more]
XP_008467173.1	3.4e-94	97.21	PREDICTED: zinc-finger homeodomain protein 9-like [Cucumis melo]	[more]
XP_004137520.1	5.8e-94	97.75	zinc-finger homeodomain protein 9 [Cucumis sativus] >KGN64200.1 hypothetical pro...	[more]
XP_022924045.1	4.6e-83	89.89	zinc-finger homeodomain protein 8-like [Cucurbita moschata] >XP_023001812.1 zinc...	[more]
XP_023542338.1	4.3e-81	84.75	zinc-finger homeodomain protein 5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Clc04G10800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2XLF4	1.3e-35	46.99	Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. indica OX=39946 GN=ZHD...	[more]
Q10DV5	1.3e-35	46.99	Zinc-finger homeodomain protein 11 OS=Oryza sativa subsp. japonica OX=39947 GN=Z...	[more]
Q9SB61	1.7e-35	46.29	Zinc-finger homeodomain protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 S...	[more]
Q9LHF0	6.6e-32	38.14	Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 S...	[more]
Q9FKP8	7.3e-31	41.27	Zinc-finger homeodomain protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZHD1 PE=1 S...	[more]

BLAST of Clc04G10800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CU70	1.7e-94	97.21	zinc-finger homeodomain protein 9-like OS=Cucumis melo OX=3656 GN=LOC103504587 P...	[more]
A0A0A0LQK4	2.8e-94	97.75	Zinc finger homeodomain protein SZF-HD1 OS=Cucumis sativus OX=3659 GN=Csa_1G0430...	[more]
A0A6J1KHP1	2.2e-83	89.89	zinc-finger homeodomain protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC1114958...	[more]
A0A6J1EDP1	2.2e-83	89.89	zinc-finger homeodomain protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1K6H9	2.7e-81	84.75	zinc-finger homeodomain protein 10-like OS=Cucurbita maxima OX=3661 GN=LOC111490...	[more]

BLAST of Clc04G10800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24660.1	1.2e-36	46.29	homeobox protein 22	[more]
AT3G28920.1	4.7e-33	38.14	homeobox protein 34	[more]
AT5G65410.1	5.2e-32	41.27	homeobox protein 25	[more]
AT2G18350.1	6.8e-32	40.56	homeobox protein 24	[more]
AT1G75240.1	3.4e-31	36.61	homeobox protein 33	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006455	Homeodomain, ZF-HD class	TIGRFAM	TIGR01565	TIGR01565	coord: 103..161 e-value: 5.6E-29 score: 97.9
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	TIGRFAM	TIGR01566	TIGR01566	coord: 9..58 e-value: 2.4E-22 score: 77.1
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PFAM	PF04770	ZF-HD_dimer	coord: 8..60 e-value: 1.1E-24 score: 86.6
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PROSITE	PS51523	ZF_HD_DIMER	coord: 10..59 score: 23.271116
None	No IPR available	GENE3D	1.10.10.60		coord: 89..167 e-value: 4.7E-35 score: 121.3
None	No IPR available	PANTHER	PTHR31948	ZINC-FINGER HOMEODOMAIN PROTEIN 2	coord: 5..169
None	No IPR available	PANTHER	PTHR31948:SF16	ZINC-FINGER HOMEODOMAIN PROTEIN 11	coord: 5..169
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 94..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc04G10800.1	Clc04G10800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding