Clc04G07790 (gene) Watermelon (cordophanus) v2

Overview
NameClc04G07790
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptionproteasome assembly chaperone 4
LocationClcChr04: 21545801 .. 21552619 (+)
RNA-Seq ExpressionClc04G07790
SyntenyClc04G07790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGTTTTTCCCATTTGCCACTGTTCATTAATATTCACTTCACTATCAAGCCAGCCGCTCACCGTTCGTCGTCGGGTTCTCATCTCACAGCCTTACCATCGCTCCTTTTCTGGCAACGACGCCAGCCGTTCGCCGTTCCGTTGGGGCTGGTGTTCTTGAGCTCAGGGTGTTTGCAGAAGAAGAAGGTTAGTCTGCTTCTTTTTGTTCACGGGTTTATGTTTATGGGGATCGGGTCGGATTTTCCGATACTCGATCGACCCAATTTCACCCCCCTAATTTTACCCAATAAAATTATTTGTTTCTTGGGTTGGATTTGCATCTGTGTACTCTTGTATCAACTGCTCGTGGAATCCAATCGGGAATTATTTGTTCAAAATTGCAATGTCCTGGAATTTTGATATCCTTGAATCCTGATTAGAAACTTTGAAAAAATACTTGCAGTTATATGTTTGCTTCCGATGCTCCTATCTGAATGAAGCTTATGTTTCCAATGATGCTTAATTAGATTATTCTTTTGCTGTTTATATTAGTTTGTCTGTTGTTTAGGACTAGGAGATAACTATTGTGGGCAATCTTTCTTCAAAAAAGTGATATAAGATTAATATTGAATTGTCTTAGTTAGTTTCTTTGTTTCTTTGTTTAGGTTGAAAAAAATGTTTTATCAAGGTCAAATCTCAAAAGAAGAACAGCCAATTGCTAGTCCATCAAGTACCAATAACGATGACATCCTTGATGGTGGTGGTGTTCGGATTACTTGCTTCAGTGAAGCCATAAATGATGTCCCCATCCATTTTCAGATCATATGTCTCTCCAAACAGGTTTTTCCATGGGTTTCCTAAACCTTCTTTTGTTTTTAGAACTCAAGGACACCGGTGTACAACCTATAAAACAGATCTGTTCAACTAAGGTTGTTCCTTCCTTGTTAGAATCGGTGTATTAAATATTTCAATGCTTAGTTTCTTGATGTTCTTTTCTGTCTTATTTGTTTATTTGTTTTTATTTTTAATGTGTAGATATATGTATGGATTGGTTGCAATTCTGCGAAATTTGGAAATCTGTATGCAGCTGCCCCCACACGGCCTGTAAGTTAAGCTCTTATTCTCTTTTTATGAAGAAAGAAACACCGATTGACTATTTCTCCTGGAAGCACTATAACGGTTAAACTACTTTGAGAAATTTTCAAATCTAATTTTGTCATTTAACCATATACCATATAAATTTTTACTAGTGGATCTAATTGGCTAATAATACTCTCTATCATTCCAAAAGTAGTACCAAACTCATCCTACAACTTTTTGTTACTTTTATGTCTTTTCTGTTCCACCTTCCTTATCTCTTCTTCTGCCTATTCCTCAATATTATCAGTGCACAATCCTGGTCACAGAGCCATTTATATTTTGCAACTGAATTTTGCAGAACAATACTGCGATTGTTACTTCCATTCTTGGAGGTTCATCTGATAATACAGGATCTAGCATGGCACGTCGATTAGGTAATACCTGAATCTATTTTTGACCTCAGTGTACTTAAGATGTCATGTCTTCTCTTTATTCTACTGATGCTTGTTCCTCCTTTCCTAGTGTTAAAAACCGGTCTAAATATCATCTTGGCTAGCAATATTCCGAAAAACAGCTCCATGATCGAGGTTTGACGATCCTCCTCTTCCTCCCTGTTTCTTCTAACAGATGAAATATGCATGAGATGATTGGTCTAAGAAAGAACTTTGCCTGGAATATTTTGTGCTCGTTTGATAACCATACAAACTTTTTTATCAGTATGTTGGCTATGTTATCTACTTTATAGAAATGTAAGTCAACTTTGGCAAACTGAGAAAAATAGTTTCCTAAAACTTGAGGTTTTTTTTTATTTTATTATTATTATTATTATTATTATAAAAAAAATCTGGTTAAAGTTTTCAAAAAAGTGAAGGTAAAAAATATAACAAAGAAACGGTTTGAGGAATCCAGTATAATTTTTGTAAACAAGAAAACTAAGGCCCCGCTTAATAACAATTGTACTTTTGTTTTTTGTTTTTGAAATTATTTTTTTACTATCGATTTCACCTTTCAACAAACATCTGAATTCTTCATATTCTTTTTTTAGAAAAAAAAACCAAGTTTTTAAATACTACTTTTTCTAGTTTTTAAAACTTGTCTTGATTTGAAGATGGATAACAACGAAAAAAAGAAAAAAAATTATAGGTGAAAAAAGTGTTTAATGACTTAAATTCTGAACAAACAAGAGATTAAAAACTAAATAATTATCAAATAGGGTTTAAGAGTCTATTTGGATTGACTAGAAAAAAAGTGTTTTTCAAAAAAATCATTTTTTTAAAACTCTTGATAAAATATTGTTTAAAATAAACTTTGAAAGTGTTCAAAAGTTATTTTGAGTGGTTGCCAAACACTCCATTTTTTCTAAATGACTTATTTTCAAAATTAAACACTTGAAAAGTTAAACTAAACACACCTTAAATCATTATCATGCTTTCAAGTTTAGATTCCTACTTAGCTGTTGTTTTTGTTTGATCATTTTAGGTAGCAGCTGAAAAGATATTAGTGCAAAAGCTGGCCAGTTTAGGGTACATTAGGCCTAAATCAGAAGGGCCATCTAGTTAATTGATTCATGATTAGTTTCTTTGCAAGAGCCAAAGAGGCATTTGTTACTCTGGTTATGGTAGCTGCTTTCTTCTTTGCAACCTTGTGACTTGAATCTAGGCTAGGACTTTAGAGGTTAATATCCCCAAACATACTATCAAGGTACTCAACGAGGTTCTCTTTTACTTCATCTTGCTTAGGTATTGGTTAAGAACATTATTCATTTGTCGTTATAATATTGGATAAATCGATAGCCAAATACAAAATGAAAGTGTAAATATGTTGTACATTTATTTGTTTAATTTCTCATTGGAAGAAGAATTTCTAGAATGAGTTACATTAAGGGAAAAAAACTCACCCCAATGTTTGACTCGTGAGTTGATCTCTATGCATATGGGTGCATGTTATATTATTTGTAGGCCTTTTTTCGCTATGCCCTTGTTTTCTTTTATTTTTTTCAACGAAAGCGTGGTTACCAAAAATAAAAAATAAAATGCATATGGTTGCATATTGTTTATCTCTTCTCTATTATTTTCTTGTTTGGTTGTCCATTTTCATTAGTTTTCTTCATTTTCAGGAATGAAACTAATATTATTTGATTCATTTTTATTGGACTTCCTCGTTGGATTTCGTAAACTATATATTTATCATAACTTTACTTCATTGTTCTTGAGTTGAATTCGGAATGAAAACTGAATAATTATAATATTTTATCTAATTTATATAACATAAAATTTAGTATGAATTGGTTGATTAAATTATGTGTGCGCATGATAGCTTACAACTATTGTATAGAATCACCCCCCTCAGAATTCTACTGTGGGCTCCTTATACCAAACGGTCTAGTTTTTTTTTTTTTGAAATCCATGAATTTTGGTGAAGTATTCTATGCTTAATTTGTACCTAATGCTTAGTCTAGGGGCGGGGCTAATTTCATGCTAATTTGATGAGTGAAAGTTTAGGTTCAAATTGATGGAACTCCAAATTTAGGGTAACGAGAATGCTAATATATCAATCTTCTAAAAACATTAATGAAACTACTAATGTCATGTAAATTCTAAGTAAATCACTAAATTTAAAAATTAGTGCAATAACTTATAGGTTAAATTCTACAAAATATCCCTAAAGTTTATACTTTGTGTCAAAAACATTCTTGTTTAAAAGTTTCAAAAATACATTTAAACTTCCAAGATGAATTTAAATATACTCATACTATTAGTTTTTTTCTATAGAAATTGTTAGTGTTTTGTATTAAAAATATCCTGGAACTTTTAAAAGTTTCAAAAATACTCTTAAATTAAAAAAAATAAAAAAAATTTCTTACTATTATGTGAATAGAAATCATTAATATCGTCTTGGTTCCTTATTTACCTTTTTTTGTTTCTCCCCTCATATTCTATACTATCTTACTCTCTTTTTTGTTAACTGTTTGACATTCTTAAATAAATAAAATTGCACACTCCACTTTAGGTGTATGAATTATAATAAGAATAAGAAAATAATGGAAGCATCCAGGGGTTTTATTTGACTATTTAACATTTTGAGGAAAGATTTTGATTCATAAAAAAATGGGAGGTTTTGATTGTGAAATGATGTGAGATTTTATGTTTTAACTTAATTCTTGTTAGAGAAAATTGATGTAAGAATTAGAAAAATATGAGAAAATGAGAATATCTATATGAAAAAAAAGAGAGATATCTATATAATTTGTTTTAAAATGTAGCGATAATTTATATATATACACACATGTTAGGAGTGATTTTTACCATTTGATATTTTTCTCTTTTATTCTTACATTTTACAGCATTGTAGCTGGTAGAAAAAGAGTGCAGCTGGTTCAAAATACTAGAATAAATATCATTAATCAAGATTTATTGTAAGAAAATTGCACTTGCTAGGCTTATTGAAAAGGATCCCAATCAAAAGAAAAAGGAGTCAAATAAGAAACATTTTATAGTTTAATTCTTAACCCATTCTTCCATTCTTCTTTAGCTTTAGCTTTGGCTAGCAATTCTCTTAAGGCATGCTTTATTCATCAAAAGAACTAACAAAAAAGAAGAAAAATCTGAAAGTCAGGAACATAGAATTGGAGTCTGATTGAATTGATGGTGTTCAAAAACAAAAACATTCTTTTCATCTGACTTGTCTTTTTTTTTTTTAAAAAAACAAAAGTCAACTCAAATAAGTGTTTAGGAGGAGTAGTGCTCAACAAGAGCAAAAGAAATTGTTCAATCATAAGTCACACTCACACGTTTTTCTCGAAGACAAATTGAAAGATAAAGAGAAGTTTTCATCTTCAATAAAGAAGTGAGTTATATGAAATTAAAACTTAAAAGTTTTTTAGGTGGAACTTTGAAGTATTTTGAAGTATGTGTATTTCGCAAGTAGCATGGGTATTGAAATTTTAAGGTTTGTGAAGATTTTTGGTTCCTACAGGGGTTTGAGTGGTAGTAAGCCTCTCAAACAATGTTGCCTGAGGAGAGGCCTTTCAACAAACTTTCACTCCCTCATTTGTAAAAATGCCTACACTAGCTAGTACGATTATGTTTGTTTCATGCGATTCAAAAGTAGATGACCTACTAGGTTAACTTCATTGTAGTAATGTCACATAAGAATGAAGTAACATTGCCAATCTCCTGCATATTACAGTCACATCCACCACTATCCAAATTCATCTAGACTCAACAAAATGCCATCTCTGCCCATTGATGACCAACGACACCACATTATGACCACTACCAACTCGTTGATTGGCCTCCTTCAACTGTATTATTGATACAAGAACAAAAGCACACTATAGTTTGAGAGTTGGGCTCATCCCATTCACTTCGGACTCCACCACCAAGGGGAGGGGATTGACGGCATCACATGAACCATCTTTGTAAAGAATTCAAGTTGGTAACCCTTCCTAATCATCACCGAACAACAACATATGAACGTCTTCAAATTGATCATCAAACTCTGTTGCACCGTTCACCTCACACTCGTGACGAGCATCTATAGATTGCCCATCATGCACGTAACAATAATCGAACACGACTACATCATCTAAAGAAACACCCACCATGCAGAGTTACAATGATCACTTTACACACGCAACCATCAAACACATGTAAAGACTTCACACATGACTGTCTAATAAAAAACAATGAAAAATCTTTCATTGTTCCACTACATGCGAAGAAAACGAGTTATAGATTTCAATTATAGTTAGCTCTTTATAAACAAAGATCAAGATAATAACATTCCAAATCTCATTTATTTTCATTCTAATTTTTAGTAAATAAATGGAGCGGAGCTATACGTCAAATTTAACCTATAATCATGTACAAAATACAAATGGGTTATTTAATTAATTAATTAATTTCAGGTCTATTTTTATTCGAAAAACTAATTTATTGAAGCTTAAAATCACATTATGTGGATAATATTTGAAAGGTCCATTTTGGCAAAGAAAAGGAAGAAGAAAAGAAGAAAAAGGAACCCTTCAAACAATCGTCATCTCCCGTGAAAGGGAGTTGGAAGCATGTTCTATTCTGTATCTTCCAAATCTAGAAGCCATTAATGCACTCTTCACAGCTTACGGATCCATCAGTTCTTCACGCCACACGCCATTGACTCTTTCTCACTCCTCTCATTTGTGTTCTGTTCTTCCATTTTTGCACTAAACCCATTTCCCTACAACCCTCCATTTCCCTCCATTTCACCCTCTGCATCGTCTTCTTTCTCACCGCCAAGTAGGGCTATTGCTACTTCTGTGCGCTTTTCTTCCTTCAGATTCCCGCCGACGCCTCGATTCCTCGGTTTTGGTAAGTCCCTTTTTTCCGCTTTTCGTCTTTCATCGCATTCTGCTGCGTGGTGCGGTTTCTTGGCGTCCTGCAAGTTGTAATTGAATTTCTGTCACTTGTTTTTGCTGCATTCTTTCAGATCTACTCGAATTTGGGTTTTGTCTTTATTTCCCACTTGGATCACGTTTGCATCACATATGAGTTATGAACCGACTCTGGTTCTTGTACATGATTCGTTCTTATTGTCGTGGTTGATTGATGGTTTTTGCAAATGGTGTTGCTTCTTACCTCTTAGTGCTTTTTCGATGGTTACAATGTAATGTATCTGGGGTTTGCCTGTTGGGAGAGATAAATTGGTTATTCTTTTCTTTGACTCTGGGCTTTGTTTTCAGGTGCTGTCCTGCATGGATATACTTATACAGTACAGTAG

mRNA sequence

ATGGAAGGTTTTTCCCATTTGCCACTGTTCATTAATATTCACTTCACTATCAAGCCAGCCGCTCACCGTTCGTCGTCGGGTTCTCATCTCACAGCCTTACCATCGCTCCTTTTCTGGCAACGACGCCAGCCGTTCGCCGTTCCGTTGGGGCTGGTGTTCTTGAGCTCAGGGTGTTTGCAGAAGAAGAAGGTTGAAAAAAATGTTTTATCAAGTGAAGCCATAAATGATGTCCCCATCCATTTTCAGATCATATGTCTCTCCAAACAGATATATGTATGGATTGGTTGCAATTCTGCGAAATTTGGAAATCTGTATGCAGCTGCCCCCACACGGCCTAACAATACTGCGATTGTTACTTCCATTCTTGGAGGTTCATCTGATAATACAGGATCTAGCATGGCACGTCGATTAGTGTTAAAAACCGGTCTAAATATCATCTTGGCTAGCAATATTCCGAAAAACAGCTCCATGATCGAGGTAGCAGCTGAAAAGATATTAGTGCAAAAGCTGGCCAGTTTAGGCTTACGGATCCATCAGTTCTTCACGCCACACGCCATTGACTCTTTCTCACTCCTCTCATTTGTGTTCTGTTCTTCCATTTTTGCACTAAACCCATTTCCCTACAACCCTCCATTTCCCTCCATTTCACCCTCTGCATCGTCTTCTTTCTCACCGCCAAGTAGGGCTATTGCTACTTCTGTGCGCTTTTCTTCCTTCAGATTCCCGCCGACGCCTCGATTCCTCGGTTTTGGTGCTGTCCTGCATGGATATACTTATACAGTACAGTAG

Coding sequence (CDS)

ATGGAAGGTTTTTCCCATTTGCCACTGTTCATTAATATTCACTTCACTATCAAGCCAGCCGCTCACCGTTCGTCGTCGGGTTCTCATCTCACAGCCTTACCATCGCTCCTTTTCTGGCAACGACGCCAGCCGTTCGCCGTTCCGTTGGGGCTGGTGTTCTTGAGCTCAGGGTGTTTGCAGAAGAAGAAGGTTGAAAAAAATGTTTTATCAAGTGAAGCCATAAATGATGTCCCCATCCATTTTCAGATCATATGTCTCTCCAAACAGATATATGTATGGATTGGTTGCAATTCTGCGAAATTTGGAAATCTGTATGCAGCTGCCCCCACACGGCCTAACAATACTGCGATTGTTACTTCCATTCTTGGAGGTTCATCTGATAATACAGGATCTAGCATGGCACGTCGATTAGTGTTAAAAACCGGTCTAAATATCATCTTGGCTAGCAATATTCCGAAAAACAGCTCCATGATCGAGGTAGCAGCTGAAAAGATATTAGTGCAAAAGCTGGCCAGTTTAGGCTTACGGATCCATCAGTTCTTCACGCCACACGCCATTGACTCTTTCTCACTCCTCTCATTTGTGTTCTGTTCTTCCATTTTTGCACTAAACCCATTTCCCTACAACCCTCCATTTCCCTCCATTTCACCCTCTGCATCGTCTTCTTTCTCACCGCCAAGTAGGGCTATTGCTACTTCTGTGCGCTTTTCTTCCTTCAGATTCCCGCCGACGCCTCGATTCCTCGGTTTTGGTGCTGTCCTGCATGGATATACTTATACAGTACAGTAG

Protein sequence

MEGFSHLPLFINIHFTIKPAAHRSSSGSHLTALPSLLFWQRRQPFAVPLGLVFLSSGCLQKKKVEKNVLSSEAINDVPIHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNTAIVTSILGGSSDNTGSSMARRLVLKTGLNIILASNIPKNSSMIEVAAEKILVQKLASLGLRIHQFFTPHAIDSFSLLSFVFCSSIFALNPFPYNPPFPSISPSASSSFSPPSRAIATSVRFSSFRFPPTPRFLGFGAVLHGYTYTVQ
Homology
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BLAST of Clc04G07790 vs. NCBI nr
Match: KAA0045091.1 (proteasome assembly chaperone 4 [Cucumis melo var. makuwa] >TYJ96236.1 proteasome assembly chaperone 4 [Cucumis melo var. makuwa])

HSP 1 Score: 192.2 bits (487), Expect = 5.6e-45
Identity = 96/104 (92.31%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 71  SEAINDVPIHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNTAIVTSILGGSSDNTG 130
           SEAINDVPIHFQIICLSKQIY+WIGCNSAKFGNLYAAAPTRPNNT  VTS+LGGSSDNTG
Sbjct: 37  SEAINDVPIHFQIICLSKQIYIWIGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTG 96

Query: 131 SSMARRLVLKTGLNIILASNIPKNSSMIEVAAEKILVQKLASLG 175
           SSMARRLVLKTGLNIILASNIPKNS MIEVAAEK+LVQKL +LG
Sbjct: 97  SSMARRLVLKTGLNIILASNIPKNSPMIEVAAEKVLVQKLVTLG 140

[Close]
BLAST of Clc04G07790 vs. NCBI nr
Match: XP_008448802.1 (PREDICTED: proteasome assembly chaperone 4 [Cucumis melo])

HSP 1 Score: 192.2 bits (487), Expect = 5.6e-45
Identity = 96/104 (92.31%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 71  SEAINDVPIHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNTAIVTSILGGSSDNTG 130
           SEAINDVPIHFQIICLSKQIY+WIGCNSAKFGNLYAAAPTRPNNT  VTS+LGGSSDNTG
Sbjct: 37  SEAINDVPIHFQIICLSKQIYIWIGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTG 96

Query: 131 SSMARRLVLKTGLNIILASNIPKNSSMIEVAAEKILVQKLASLG 175
           SSMARRLVLKTGLNIILASNIPKNS MIEVAAEK+LVQKL +LG
Sbjct: 97  SSMARRLVLKTGLNIILASNIPKNSPMIEVAAEKVLVQKLVTLG 140

[Close]
BLAST of Clc04G07790 vs. NCBI nr
Match: XP_004147905.1 (proteasome assembly chaperone 4 [Cucumis sativus] >XP_011653669.1 proteasome assembly chaperone 4 [Cucumis sativus] >XP_011653670.1 proteasome assembly chaperone 4 [Cucumis sativus] >XP_031740248.1 proteasome assembly chaperone 4 [Cucumis sativus] >KGN54334.1 hypothetical protein Csa_017960 [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 7.4e-45
Identity = 97/104 (93.27%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 71  SEAINDVPIHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNTAIVTSILGGSSDNTG 130
           SEAINDVPIHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNT  VTSILGGSSDNTG
Sbjct: 35  SEAINDVPIHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTG 94

Query: 131 SSMARRLVLKTGLNIILASNIPKNSSMIEVAAEKILVQKLASLG 175
           SSMARRLVLKTGLNIILASNIPKNS +IEVAAEK+LVQKL +LG
Sbjct: 95  SSMARRLVLKTGLNIILASNIPKNSPIIEVAAEKVLVQKLVTLG 138

[Close]
BLAST of Clc04G07790 vs. NCBI nr
Match: XP_038881184.1 (proteasome assembly chaperone 4 [Benincasa hispida])

HSP 1 Score: 189.9 bits (481), Expect = 2.8e-44
Identity = 97/104 (93.27%), Postives = 99/104 (95.19%), Query Frame = 0 

Query: 71  SEAINDVPIHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNTAIVTSILGGSSDNTG 130
           SEAINDVPIHFQIICLSKQIYVWIGCNSAK GNLYAAAPTRPNNT  VTSILGGSSDNTG
Sbjct: 37  SEAINDVPIHFQIICLSKQIYVWIGCNSAKIGNLYAAAPTRPNNTVSVTSILGGSSDNTG 96

Query: 131 SSMARRLVLKTGLNIILASNIPKNSSMIEVAAEKILVQKLASLG 175
           SSMARRLVLK+GLNIILASNIPKNS MIEVAAEKILVQKL +LG
Sbjct: 97  SSMARRLVLKSGLNIILASNIPKNSPMIEVAAEKILVQKLVTLG 140

[Close]
BLAST of Clc04G07790 vs. NCBI nr
Match: XP_022137778.1 (proteasome assembly chaperone 4 [Momordica charantia] >XP_022137779.1 proteasome assembly chaperone 4 [Momordica charantia])

HSP 1 Score: 187.2 bits (474), Expect = 1.8e-43
Identity = 96/104 (92.31%), Postives = 98/104 (94.23%), Query Frame = 0 

Query: 71  SEAINDVPIHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNTAIVTSILGGSSDNTG 130
           SEAINDVP+HFQIICLSKQIY WIG NSAKFGNLYAAAPTRPNNT  VTSILGGSSDNTG
Sbjct: 36  SEAINDVPLHFQIICLSKQIYAWIGYNSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTG 95

Query: 131 SSMARRLVLKTGLNIILASNIPKNSSMIEVAAEKILVQKLASLG 175
           SSMARRLVLKTGLNIILASNIPKNS MIEVAAEK+LVQKL SLG
Sbjct: 96  SSMARRLVLKTGLNIILASNIPKNSPMIEVAAEKMLVQKLVSLG 139

[Close]
BLAST of Clc04G07790 vs. ExPASy Swiss-Prot
Match: Q5JS54 (Proteasome assembly chaperone 4 OS=Homo sapiens OX=9606 GN=PSMG4 PE=1 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 7.8e-05
Identity = 24/92 (26.09%), Postives = 51/92 (55.43%), Query Frame = 0 

Query: 79  IHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNTAIVTSILGGSSDNTGSSMARRLV 138
           +HF ++ L+  +++W+G  +    NL  A  +R ++  + TS+LG +SD T + +A+RL 
Sbjct: 26  VHFHVMRLTDSLFLWVGA-TPHLRNLAVAMCSRYDSIPVSTSLLGDTSDTTSTGLAQRLA 85

Query: 139 LKTGLNIILASNIPKNSSMIEVAAEKILVQKL 171
            KT   + ++ N+    S   +  E  + +++
Sbjct: 86  RKTNKQVFVSYNLQNTDSNFALLVENRIKEEM 116

[Close]
BLAST of Clc04G07790 vs. ExPASy Swiss-Prot
Match: P0C7N9 (Proteasome assembly chaperone 4 OS=Mus musculus OX=10090 GN=Psmg4 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.8e-04
Identity = 23/92 (25.00%), Postives = 49/92 (53.26%), Query Frame = 0 

Query: 79  IHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNTAIVTSILGGSSDNTGSSMARRLV 138
           +HF ++ L+  +++W+G  +    NL  A  +R +   + TS+ G +SD T + +A+RL 
Sbjct: 26  VHFHVMRLTDSLFLWVGA-TPHLRNLAVAMCSRYDPIPVCTSLFGDTSDTTSTGLAQRLA 85

Query: 139 LKTGLNIILASNIPKNSSMIEVAAEKILVQKL 171
            KT   + ++ N+    S   +  E  + +++
Sbjct: 86  RKTSKQVFVSYNLSNTDSNFTLLVENRIKEEM 116

[Close]
BLAST of Clc04G07790 vs. ExPASy TrEMBL
Match: A0A5D3BBH2 (Proteasome assembly chaperone 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00260 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.7e-45
Identity = 96/104 (92.31%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 71  SEAINDVPIHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNTAIVTSILGGSSDNTG 130
           SEAINDVPIHFQIICLSKQIY+WIGCNSAKFGNLYAAAPTRPNNT  VTS+LGGSSDNTG
Sbjct: 37  SEAINDVPIHFQIICLSKQIYIWIGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTG 96

Query: 131 SSMARRLVLKTGLNIILASNIPKNSSMIEVAAEKILVQKLASLG 175
           SSMARRLVLKTGLNIILASNIPKNS MIEVAAEK+LVQKL +LG
Sbjct: 97  SSMARRLVLKTGLNIILASNIPKNSPMIEVAAEKVLVQKLVTLG 140

[Close]
BLAST of Clc04G07790 vs. ExPASy TrEMBL
Match: A0A1S3BJY7 (proteasome assembly chaperone 4 OS=Cucumis melo OX=3656 GN=LOC103490859 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.7e-45
Identity = 96/104 (92.31%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 71  SEAINDVPIHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNTAIVTSILGGSSDNTG 130
           SEAINDVPIHFQIICLSKQIY+WIGCNSAKFGNLYAAAPTRPNNT  VTS+LGGSSDNTG
Sbjct: 37  SEAINDVPIHFQIICLSKQIYIWIGCNSAKFGNLYAAAPTRPNNTVSVTSLLGGSSDNTG 96

Query: 131 SSMARRLVLKTGLNIILASNIPKNSSMIEVAAEKILVQKLASLG 175
           SSMARRLVLKTGLNIILASNIPKNS MIEVAAEK+LVQKL +LG
Sbjct: 97  SSMARRLVLKTGLNIILASNIPKNSPMIEVAAEKVLVQKLVTLG 140

[Close]
BLAST of Clc04G07790 vs. ExPASy TrEMBL
Match: A0A0A0KZU0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G304800 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 3.6e-45
Identity = 97/104 (93.27%), Postives = 100/104 (96.15%), Query Frame = 0 

Query: 71  SEAINDVPIHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNTAIVTSILGGSSDNTG 130
           SEAINDVPIHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNT  VTSILGGSSDNTG
Sbjct: 35  SEAINDVPIHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTG 94

Query: 131 SSMARRLVLKTGLNIILASNIPKNSSMIEVAAEKILVQKLASLG 175
           SSMARRLVLKTGLNIILASNIPKNS +IEVAAEK+LVQKL +LG
Sbjct: 95  SSMARRLVLKTGLNIILASNIPKNSPIIEVAAEKVLVQKLVTLG 138

[Close]
BLAST of Clc04G07790 vs. ExPASy TrEMBL
Match: A0A6J1C889 (proteasome assembly chaperone 4 OS=Momordica charantia OX=3673 GN=LOC111009137 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 8.8e-44
Identity = 96/104 (92.31%), Postives = 98/104 (94.23%), Query Frame = 0 

Query: 71  SEAINDVPIHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNTAIVTSILGGSSDNTG 130
           SEAINDVP+HFQIICLSKQIY WIG NSAKFGNLYAAAPTRPNNT  VTSILGGSSDNTG
Sbjct: 36  SEAINDVPLHFQIICLSKQIYAWIGYNSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNTG 95

Query: 131 SSMARRLVLKTGLNIILASNIPKNSSMIEVAAEKILVQKLASLG 175
           SSMARRLVLKTGLNIILASNIPKNS MIEVAAEK+LVQKL SLG
Sbjct: 96  SSMARRLVLKTGLNIILASNIPKNSPMIEVAAEKMLVQKLVSLG 139

[Close]
BLAST of Clc04G07790 vs. ExPASy TrEMBL
Match: A0A6J1FPQ8 (proteasome assembly chaperone 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447543 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.0e-43
Identity = 95/104 (91.35%), Postives = 99/104 (95.19%), Query Frame = 0 

Query: 71  SEAINDVPIHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNTAIVTSILGGSSDNTG 130
           SEAINDVP+HFQII LSKQIYVWIGC+SAKFGNLYAAAPTRPNNT  VTSILGGSSDN G
Sbjct: 37  SEAINDVPVHFQIISLSKQIYVWIGCSSAKFGNLYAAAPTRPNNTVSVTSILGGSSDNAG 96

Query: 131 SSMARRLVLKTGLNIILASNIPKNSSMIEVAAEKILVQKLASLG 175
           +SMARRLVLKTGLNIILASNIPKNS MIEVAAEK+LVQKLASLG
Sbjct: 97  ASMARRLVLKTGLNIILASNIPKNSPMIEVAAEKMLVQKLASLG 140

[Close]
BLAST of Clc04G07790 vs. TAIR 10
Match: AT1G48170.1 (unknown protein; Has 78 Blast hits to 78 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 30; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 152.1 bits (383), Expect = 6.0e-37
Identity = 74/104 (71.15%), Postives = 89/104 (85.58%), Query Frame = 0 

Query: 71  SEAINDVPIHFQIICLSKQIYVWIGCNSAKFGNLYAAAPTRPNNTAIVTSILGGSSDNTG 130
           +E  +DV I FQII L+KQIYVW+GCNSAKFG+LYAAA TRP+NT  VTS+LGG+SDNTG
Sbjct: 40  TEVFDDVTIQFQIIRLAKQIYVWVGCNSAKFGSLYAAASTRPSNTVSVTSVLGGTSDNTG 99

Query: 131 SSMARRLVLKTGLNIILASNIPKNSSMIEVAAEKILVQKLASLG 175
           S +ARRLVLKTGLNIILA NIPKN+ ++E  AEK+L++KL  LG
Sbjct: 100 SGIARRLVLKTGLNIILACNIPKNNPLLEAKAEKVLIRKLIDLG 143

The following BLAST results are available for this feature:
BLAST of Clc04G07790 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0045091.15.6e-4592.31proteasome assembly chaperone 4 [Cucumis melo var. makuwa] >TYJ96236.1 proteasom... [more]
XP_008448802.15.6e-4592.31PREDICTED: proteasome assembly chaperone 4 [Cucumis melo][more]
XP_004147905.17.4e-4593.27proteasome assembly chaperone 4 [Cucumis sativus] >XP_011653669.1 proteasome ass... [more]
XP_038881184.12.8e-4493.27proteasome assembly chaperone 4 [Benincasa hispida][more]
XP_022137778.11.8e-4392.31proteasome assembly chaperone 4 [Momordica charantia] >XP_022137779.1 proteasome... [more]
BLAST of Clc04G07790 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5JS547.8e-0526.09Proteasome assembly chaperone 4 OS=Homo sapiens OX=9606 GN=PSMG4 PE=1 SV=2[more]
P0C7N93.8e-0425.00Proteasome assembly chaperone 4 OS=Mus musculus OX=10090 GN=Psmg4 PE=1 SV=1[more]
BLAST of Clc04G07790 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BBH22.7e-4592.31Proteasome assembly chaperone 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S3BJY72.7e-4592.31proteasome assembly chaperone 4 OS=Cucumis melo OX=3656 GN=LOC103490859 PE=4 SV=... [more]
A0A0A0KZU03.6e-4593.27Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G304800 PE=4 SV=1[more]
A0A6J1C8898.8e-4492.31proteasome assembly chaperone 4 OS=Momordica charantia OX=3673 GN=LOC111009137 P... [more]
A0A6J1FPQ82.0e-4391.35proteasome assembly chaperone 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of Clc04G07790 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G48170.16.0e-3771.15unknown protein; Has 78 Blast hits to 78 proteins in 34 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032157Proteasome assembly chaperone 4PFAMPF16093PAC4coord: 79..151
e-value: 8.7E-19
score: 67.5
IPR032157Proteasome assembly chaperone 4PANTHERPTHR33559PROTEASOME ASSEMBLY CHAPERONE 4coord: 71..174

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc04G07790.1Clc04G07790.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043248 proteasome assembly
cellular_component GO:0000502 proteasome complex
molecular_function GO:0030247 polysaccharide binding