Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTATTATTAAATAAAGTAGCCGTTGCCGCCTGTATGCTTTCAAATTCAAACCCTAAAAACACAAAAATCCAAATCCTTGAGAACCCCCTTTTCTCCCATTCTTCATTCTCTTTTTCTATGATTCCATTTCTTCTCTTTCAAACCAATTCTCCATCTCCATCGATATGCAGACTCTCCACCATCCCTTAGCCTCTCCTCAAGATCTTCCTCTCAAGTCCGGCCGCCGCCCACTCCAGCCGAAGAATTCTCTCCCAAATCCTCTTCCTTCCGTCGCCAAAATCATCAAATCCAAGCCGGAAAGGATCCAGATCTCCCTCTCCGGCGACGCCAATAAGGAGAACAATCCGCCGATTCACCCAGCGGCAACTGCCACAACGGCGAGTATTGAGTCTTGTGATTTGTCTCTGGCGGATGAGCTTAATGCGGTTAAGAGGAAGCTCGAGAGATTGAGATTGGACGGTGAACGAACGGAGCAGATGTTGAGAGAGAGGGATTTGGTCTTGGAGTTACGGATGAAGGAGCTGTTGCAGAGAAGTCAAGAGCAGAGAGATCTGGAGATGGAAGTCGATAGGTTATTCAGATTAAAGGAACTCAGATCGTACTGTATGGTAAATGACTAAACGTTCTGTTTTGTGAGTTTAAAGTTTCGATTCGATTTGTTGTTCGTTCGCTGATTTTTGATGATTTGAATCAGAGGATTTCTCCGATTCGGAGTCTCAGAGAGAAAGAGCGAGAAAAGATTTTCACCGATGCACAATTTCCGGTAAGTTCCGATCTCAAATTTCGAAGCTATTTCTCTATTTTCAGAAACTCTGGGTTCATCCGCTTCAATGATTGTTTCAGGAATTTGAAATCGGCGATGGAGAAGAATCTGTTGGCGAAAACTCCTCGTTGGATTCTGCAGAATTCGTAACAGGTTTTTGAAATCGTTTTAAGTTTTGTTCGCCGCTTTCAATTTGCCCTAATTTTCCGATCACTACTACTTCAGAAAAAGAAATCAATGTAATACCTCATTATGATCTTCTTTATGCACTGAACGAAACTTCTGAGTTGTACTCAATATCATTCTCCATCTTCTTCACTTCAATTAATGCTTGA
mRNA sequence
GTTATTATTAAATAAAGTAGCCGTTGCCGCCTGTATGCTTTCAAATTCAAACCCTAAAAACACAAAAATCCAAATCCTTGAGAACCCCCTTTTCTCCCATTCTTCATTCTCTTTTTCTATGATTCCATTTCTTCTCTTTCAAACCAATTCTCCATCTCCATCGATATGCAGACTCTCCACCATCCCTTAGCCTCTCCTCAAGATCTTCCTCTCAAGTCCGGCCGCCGCCCACTCCAGCCGAAGAATTCTCTCCCAAATCCTCTTCCTTCCGTCGCCAAAATCATCAAATCCAAGCCGGAAAGGATCCAGATCTCCCTCTCCGGCGACGCCAATAAGGAGAACAATCCGCCGATTCACCCAGCGGCAACTGCCACAACGGCGAGTATTGAGTCTTGTGATTTGTCTCTGGCGGATGAGCTTAATGCGGTTAAGAGGAAGCTCGAGAGATTGAGATTGGACGGTGAACGAACGGAGCAGATGTTGAGAGAGAGGGATTTGGTCTTGGAGTTACGGATGAAGGAGCTGTTGCAGAGAAGTCAAGAGCAGAGAGATCTGGAGATGGAAGTCGATAGGTTATTCAGATTAAAGGAACTCAGATCGTACTGTATGAGGATTTCTCCGATTCGGAGTCTCAGAGAGAAAGAGCGAGAAAAGATTTTCACCGATGCACAATTTCCGGAATTTGAAATCGGCGATGGAGAAGAATCTGTTGGCGAAAACTCCTCGTTGGATTCTGCAGAATTCGTAACAGAAAAAGAAATCAATGTAATACCTCATTATGATCTTCTTTATGCACTGAACGAAACTTCTGAGTTGTACTCAATATCATTCTCCATCTTCTTCACTTCAATTAATGCTTGA
Coding sequence (CDS)
ATGCAGACTCTCCACCATCCCTTAGCCTCTCCTCAAGATCTTCCTCTCAAGTCCGGCCGCCGCCCACTCCAGCCGAAGAATTCTCTCCCAAATCCTCTTCCTTCCGTCGCCAAAATCATCAAATCCAAGCCGGAAAGGATCCAGATCTCCCTCTCCGGCGACGCCAATAAGGAGAACAATCCGCCGATTCACCCAGCGGCAACTGCCACAACGGCGAGTATTGAGTCTTGTGATTTGTCTCTGGCGGATGAGCTTAATGCGGTTAAGAGGAAGCTCGAGAGATTGAGATTGGACGGTGAACGAACGGAGCAGATGTTGAGAGAGAGGGATTTGGTCTTGGAGTTACGGATGAAGGAGCTGTTGCAGAGAAGTCAAGAGCAGAGAGATCTGGAGATGGAAGTCGATAGGTTATTCAGATTAAAGGAACTCAGATCGTACTGTATGAGGATTTCTCCGATTCGGAGTCTCAGAGAGAAAGAGCGAGAAAAGATTTTCACCGATGCACAATTTCCGGAATTTGAAATCGGCGATGGAGAAGAATCTGTTGGCGAAAACTCCTCGTTGGATTCTGCAGAATTCGTAACAGAAAAAGAAATCAATGTAATACCTCATTATGATCTTCTTTATGCACTGAACGAAACTTCTGAGTTGTACTCAATATCATTCTCCATCTTCTTCACTTCAATTAATGCTTGA
Protein sequence
MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENNPPIHPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKELLQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSAEFVTEKEINVIPHYDLLYALNETSELYSISFSIFFTSINA
Homology
BLAST of Clc04G06680 vs. NCBI nr
Match:
XP_038883293.1 (uncharacterized protein LOC120074285 [Benincasa hispida])
HSP 1 Score: 343.6 bits (880), Expect = 1.3e-90
Identity = 185/195 (94.87%), Postives = 187/195 (95.90%), Query Frame = 0
Query: 1 MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
MQTLHHPLA+PQDLPLKSGRRPLQPKNSLPN PSVAK IKSKPERIQISLSGDANKEN+
Sbjct: 1 MQTLHHPLATPQDLPLKSGRRPLQPKNSLPNSGPSVAKFIKSKPERIQISLSGDANKENH 60
Query: 61 PPIHPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
PPIH AT TTASIESCD SLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL
Sbjct: 61 PPIHATATTTTASIESCDSSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
Query: 181 SVGENSSLDSAEFVT 196
SVGENSSLDSA FVT
Sbjct: 181 SVGENSSLDSAGFVT 195
BLAST of Clc04G06680 vs. NCBI nr
Match:
KAA0025412.1 (high mobility group B protein 6 [Cucumis melo var. makuwa])
HSP 1 Score: 331.3 bits (848), Expect = 6.9e-87
Identity = 179/195 (91.79%), Postives = 186/195 (95.38%), Query Frame = 0
Query: 1 MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
MQTLHHPL SP+D+PLKSGRRPLQPKNSLPNP+PSVAKIIKSKPE IQISLSGDANKEN+
Sbjct: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENH 60
Query: 61 PPIHPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
PP ATT SIESCDLSLADELNAVKRK+ERLRLDGERTE+MLRERDLVLELRMKEL
Sbjct: 61 PP------ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120
Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
Query: 181 SVGENSSLDSAEFVT 196
SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 189
BLAST of Clc04G06680 vs. NCBI nr
Match:
XP_004142680.1 (high mobility group B protein 6 [Cucumis sativus] >KGN54454.1 hypothetical protein Csa_012022 [Cucumis sativus])
HSP 1 Score: 328.2 bits (840), Expect = 5.8e-86
Identity = 178/195 (91.28%), Postives = 184/195 (94.36%), Query Frame = 0
Query: 1 MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
MQTLHHPL P+DLPLKSGRRPLQPKNSLPNP+PSVAKIIKSKPE IQISLSGDANKEN+
Sbjct: 1 MQTLHHPLPPPRDLPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENH 60
Query: 61 PPIHPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
PP TT SIESCDLSLADELNAVKRK+ERLRLDGERTE+MLRERDLVLELRMKEL
Sbjct: 61 PP------PTTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120
Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
Query: 181 SVGENSSLDSAEFVT 196
SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 189
BLAST of Clc04G06680 vs. NCBI nr
Match:
XP_008463266.1 (PREDICTED: high mobility group B protein 6 [Cucumis melo] >TYK09760.1 high mobility group B protein 6 [Cucumis melo var. makuwa])
HSP 1 Score: 327.4 bits (838), Expect = 9.9e-86
Identity = 178/195 (91.28%), Postives = 185/195 (94.87%), Query Frame = 0
Query: 1 MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
MQTLHHPL SP+D+PLKSGRRPLQPKNSLPN +PSVAKIIKSKPE IQISLSGDANKEN+
Sbjct: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60
Query: 61 PPIHPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
PP ATT SIESCDLSLADELNAVKRK+ERLRLDGERTE+MLRERDLVLELRMKEL
Sbjct: 61 PP------ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120
Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
Query: 181 SVGENSSLDSAEFVT 196
SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 189
BLAST of Clc04G06680 vs. NCBI nr
Match:
XP_022978293.1 (high mobility group B protein 13-like [Cucurbita maxima])
HSP 1 Score: 315.1 bits (806), Expect = 5.1e-82
Identity = 168/195 (86.15%), Postives = 181/195 (92.82%), Query Frame = 0
Query: 1 MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
MQ LH PLA+P DLPLKSGRRPLQPKNSLPNP+P+VAK+IKSKPERIQISL DANKEN+
Sbjct: 1 MQALHQPLATPHDLPLKSGRRPLQPKNSLPNPVPAVAKVIKSKPERIQISLPTDANKENH 60
Query: 61 PPIHPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
PPIH A AS+ESCDLSLADELNAVKRKLERLRL+ ERTEQML+ERD++LELRMKEL
Sbjct: 61 PPIH----AKAASVESCDLSLADELNAVKRKLERLRLERERTEQMLKERDMILELRMKEL 120
Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
LQRS+EQRDLEMEVDRLFRLKELR YCMRISPIRSLREKEREKIF DAQFPE+EIGDGEE
Sbjct: 121 LQRSKEQRDLEMEVDRLFRLKELRLYCMRISPIRSLREKEREKIFADAQFPEYEIGDGEE 180
Query: 181 SVGENSSLDSAEFVT 196
SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 191
BLAST of Clc04G06680 vs. ExPASy TrEMBL
Match:
A0A5A7SJQ2 (High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1220G00510 PE=4 SV=1)
HSP 1 Score: 331.3 bits (848), Expect = 3.3e-87
Identity = 179/195 (91.79%), Postives = 186/195 (95.38%), Query Frame = 0
Query: 1 MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
MQTLHHPL SP+D+PLKSGRRPLQPKNSLPNP+PSVAKIIKSKPE IQISLSGDANKEN+
Sbjct: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENH 60
Query: 61 PPIHPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
PP ATT SIESCDLSLADELNAVKRK+ERLRLDGERTE+MLRERDLVLELRMKEL
Sbjct: 61 PP------ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120
Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
Query: 181 SVGENSSLDSAEFVT 196
SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 189
BLAST of Clc04G06680 vs. ExPASy TrEMBL
Match:
A0A0A0L063 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G334650 PE=4 SV=1)
HSP 1 Score: 328.2 bits (840), Expect = 2.8e-86
Identity = 178/195 (91.28%), Postives = 184/195 (94.36%), Query Frame = 0
Query: 1 MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
MQTLHHPL P+DLPLKSGRRPLQPKNSLPNP+PSVAKIIKSKPE IQISLSGDANKEN+
Sbjct: 1 MQTLHHPLPPPRDLPLKSGRRPLQPKNSLPNPVPSVAKIIKSKPEIIQISLSGDANKENH 60
Query: 61 PPIHPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
PP TT SIESCDLSLADELNAVKRK+ERLRLDGERTE+MLRERDLVLELRMKEL
Sbjct: 61 PP------PTTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120
Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
Query: 181 SVGENSSLDSAEFVT 196
SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 189
BLAST of Clc04G06680 vs. ExPASy TrEMBL
Match:
A0A5D3CEI7 (High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00430 PE=4 SV=1)
HSP 1 Score: 327.4 bits (838), Expect = 4.8e-86
Identity = 178/195 (91.28%), Postives = 185/195 (94.87%), Query Frame = 0
Query: 1 MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
MQTLHHPL SP+D+PLKSGRRPLQPKNSLPN +PSVAKIIKSKPE IQISLSGDANKEN+
Sbjct: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60
Query: 61 PPIHPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
PP ATT SIESCDLSLADELNAVKRK+ERLRLDGERTE+MLRERDLVLELRMKEL
Sbjct: 61 PP------ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120
Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
Query: 181 SVGENSSLDSAEFVT 196
SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 189
BLAST of Clc04G06680 vs. ExPASy TrEMBL
Match:
A0A1S3CJ78 (high mobility group B protein 6 OS=Cucumis melo OX=3656 GN=LOC103501469 PE=4 SV=1)
HSP 1 Score: 327.4 bits (838), Expect = 4.8e-86
Identity = 178/195 (91.28%), Postives = 185/195 (94.87%), Query Frame = 0
Query: 1 MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
MQTLHHPL SP+D+PLKSGRRPLQPKNSLPN +PSVAKIIKSKPE IQISLSGDANKEN+
Sbjct: 1 MQTLHHPLPSPRDIPLKSGRRPLQPKNSLPNLVPSVAKIIKSKPEIIQISLSGDANKENH 60
Query: 61 PPIHPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
PP ATT SIESCDLSLADELNAVKRK+ERLRLDGERTE+MLRERDLVLELRMKEL
Sbjct: 61 PP------ATTVSIESCDLSLADELNAVKRKMERLRLDGERTEKMLRERDLVLELRMKEL 120
Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE
Sbjct: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
Query: 181 SVGENSSLDSAEFVT 196
SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 189
BLAST of Clc04G06680 vs. ExPASy TrEMBL
Match:
A0A6J1ISM0 (high mobility group B protein 13-like OS=Cucurbita maxima OX=3661 GN=LOC111478322 PE=4 SV=1)
HSP 1 Score: 315.1 bits (806), Expect = 2.5e-82
Identity = 168/195 (86.15%), Postives = 181/195 (92.82%), Query Frame = 0
Query: 1 MQTLHHPLASPQDLPLKSGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENN 60
MQ LH PLA+P DLPLKSGRRPLQPKNSLPNP+P+VAK+IKSKPERIQISL DANKEN+
Sbjct: 1 MQALHQPLATPHDLPLKSGRRPLQPKNSLPNPVPAVAKVIKSKPERIQISLPTDANKENH 60
Query: 61 PPIHPAATATTASIESCDLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKEL 120
PPIH A AS+ESCDLSLADELNAVKRKLERLRL+ ERTEQML+ERD++LELRMKEL
Sbjct: 61 PPIH----AKAASVESCDLSLADELNAVKRKLERLRLERERTEQMLKERDMILELRMKEL 120
Query: 121 LQRSQEQRDLEMEVDRLFRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEE 180
LQRS+EQRDLEMEVDRLFRLKELR YCMRISPIRSLREKEREKIF DAQFPE+EIGDGEE
Sbjct: 121 LQRSKEQRDLEMEVDRLFRLKELRLYCMRISPIRSLREKEREKIFADAQFPEYEIGDGEE 180
Query: 181 SVGENSSLDSAEFVT 196
SVGENSSLDS+EFVT
Sbjct: 181 SVGENSSLDSSEFVT 191
BLAST of Clc04G06680 vs. TAIR 10
Match:
AT5G01910.1 (unknown protein; Has 66 Blast hits to 66 proteins in 27 species: Archae - 0; Bacteria - 2; Metazoa - 18; Fungi - 7; Plants - 29; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )
HSP 1 Score: 102.8 bits (255), Expect = 3.7e-22
Identity = 73/181 (40.33%), Postives = 102/181 (56.35%), Query Frame = 0
Query: 18 SGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENNPPIHPAATATTASIESC 77
SGR+ LQP+N P + E+++ +L+ + S
Sbjct: 4 SGRKALQPRNIYQTPKEDAFFVKPKAAEKLKENLNLET--------------------SI 63
Query: 78 DLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKELLQRSQEQRDLEMEVDRL 137
D SLA+EL+A K+KLERLR D E TE++L+ERD ++L M LLQR + Q+ LE++VDRL
Sbjct: 64 DASLAEELSAFKKKLERLREDRESTEKLLKERDEAMDLHMSHLLQRGETQKSLEIQVDRL 123
Query: 138 FRLKELRSYCMRISPIRSLREKEREKIFTDAQFPEFEIGDGEESVGENSSLDSAEFVTEK 197
FRLKEL +Y +ISPIRSLR KE+++ F GEE E SS++ A E+
Sbjct: 124 FRLKELHAYSSKISPIRSLRAKEQQEKMRRFTFA------GEEQPDEESSVEIANGPIEE 158
Query: 198 E 199
E
Sbjct: 184 E 158
BLAST of Clc04G06680 vs. TAIR 10
Match:
AT5G01910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 11 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 98.2 bits (243), Expect = 9.1e-21
Identity = 63/146 (43.15%), Postives = 89/146 (60.96%), Query Frame = 0
Query: 18 SGRRPLQPKNSLPNPLPSVAKIIKSKPERIQISLSGDANKENNPPIHPAATATTASIESC 77
SGR+ LQP+N P + E+++ +L+ + S
Sbjct: 4 SGRKALQPRNIYQTPKEDAFFVKPKAAEKLKENLNLET--------------------SI 63
Query: 78 DLSLADELNAVKRKLERLRLDGERTEQMLRERDLVLELRMKELLQRSQEQRDLEMEVDRL 137
D SLA+EL+A K+KLERLR D E TE++L+ERD ++L M LLQR + Q+ LE++VDRL
Sbjct: 64 DASLAEELSAFKKKLERLREDRESTEKLLKERDEAMDLHMSHLLQRGETQKSLEIQVDRL 123
Query: 138 FRLKELRSYCMRISPIRSLREKEREK 164
FRLKEL +Y +ISPIRSLR KE+++
Sbjct: 124 FRLKELHAYSSKISPIRSLRAKEQQE 129
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038883293.1 | 1.3e-90 | 94.87 | uncharacterized protein LOC120074285 [Benincasa hispida] | [more] |
KAA0025412.1 | 6.9e-87 | 91.79 | high mobility group B protein 6 [Cucumis melo var. makuwa] | [more] |
XP_004142680.1 | 5.8e-86 | 91.28 | high mobility group B protein 6 [Cucumis sativus] >KGN54454.1 hypothetical prote... | [more] |
XP_008463266.1 | 9.9e-86 | 91.28 | PREDICTED: high mobility group B protein 6 [Cucumis melo] >TYK09760.1 high mobil... | [more] |
XP_022978293.1 | 5.1e-82 | 86.15 | high mobility group B protein 13-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SJQ2 | 3.3e-87 | 91.79 | High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
A0A0A0L063 | 2.8e-86 | 91.28 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G334650 PE=4 SV=1 | [more] |
A0A5D3CEI7 | 4.8e-86 | 91.28 | High mobility group B protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
A0A1S3CJ78 | 4.8e-86 | 91.28 | high mobility group B protein 6 OS=Cucumis melo OX=3656 GN=LOC103501469 PE=4 SV=... | [more] |
A0A6J1ISM0 | 2.5e-82 | 86.15 | high mobility group B protein 13-like OS=Cucurbita maxima OX=3661 GN=LOC11147832... | [more] |
Match Name | E-value | Identity | Description | |
AT5G01910.1 | 3.7e-22 | 40.33 | unknown protein; Has 66 Blast hits to 66 proteins in 27 species: Archae - 0; Bac... | [more] |
AT5G01910.2 | 9.1e-21 | 43.15 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |