Clc04G05695 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATAGTGTCTTGGATGTCAATGCCAATATGTATGATGCAGATTTTGGGTGGGGACGACCAGATTATGTTGGAGCGGCAGTATTAGGTTCTGATGGGAAGGCGTACGTCATGCCAGGGCCGACCAACCATGGTTCACTCATTGTAGCGATGCAGTTGCAGGCGAAGCATATGGAGGGTTTCACGAAGTTCTTCTATGAAGATCTTTGA ATGTATAGTGTCTTGGATGTCAATGCCAATATGTATGATGCAGATTTTGGGTGGGGACGACCAGATTATGTTGGAGCGGCAGTATTAGGTTCTGATGGGAAGGCGTACGTCATGCCAGGGCCGACCAACCATGGTTCACTCATTGTAGCGATGCAGTTGCAGGCGAAGCATATGGAGGGTTTCACGAAGTTCTTCTATGAAGATCTTTGA ATGTATAGTGTCTTGGATGTCAATGCCAATATGTATGATGCAGATTTTGGGTGGGGACGACCAGATTATGTTGGAGCGGCAGTATTAGGTTCTGATGGGAAGGCGTACGTCATGCCAGGGCCGACCAACCATGGTTCACTCATTGTAGCGATGCAGTTGCAGGCGAAGCATATGGAGGGTTTCACGAAGTTCTTCTATGAAGATCTTTGA MYSVLDVNANMYDADFGWGRPDYVGAAVLGSDGKAYVMPGPTNHGSLIVAMQLQAKHMEGFTKFFYEDL Homology
BLAST of Clc04G05695 vs. NCBI nr
Match: XP_022156247.1 (spermidine hydroxycinnamoyl transferase-like [Momordica charantia]) HSP 1 Score: 99.8 bits (247), Expect = 1.0e-17 Identity = 42/59 (71.19%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of Clc04G05695 vs. NCBI nr
Match: KGN53927.1 (hypothetical protein Csa_019170 [Cucumis sativus]) HSP 1 Score: 94.4 bits (233), Expect = 4.2e-16 Identity = 40/59 (67.80%), Postives = 47/59 (79.66%), Query Frame = 0
BLAST of Clc04G05695 vs. NCBI nr
Match: XP_031739985.1 (spermidine hydroxycinnamoyl transferase [Cucumis sativus]) HSP 1 Score: 94.4 bits (233), Expect = 4.2e-16 Identity = 40/59 (67.80%), Postives = 47/59 (79.66%), Query Frame = 0
BLAST of Clc04G05695 vs. NCBI nr
Match: XP_004149125.1 (spermidine hydroxycinnamoyl transferase [Cucumis sativus] >KGN53930.1 hypothetical protein Csa_019157 [Cucumis sativus]) HSP 1 Score: 94.4 bits (233), Expect = 4.2e-16 Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 0
BLAST of Clc04G05695 vs. NCBI nr
Match: XP_022966304.1 (spermidine hydroxycinnamoyl transferase-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 92.4 bits (228), Expect = 1.6e-15 Identity = 38/63 (60.32%), Postives = 51/63 (80.95%), Query Frame = 0
BLAST of Clc04G05695 vs. ExPASy Swiss-Prot
Match: Q9FI78 (Shikimate O-hydroxycinnamoyltransferase OS=Arabidopsis thaliana OX=3702 GN=HST PE=1 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 5.0e-12 Identity = 31/61 (50.82%), Postives = 44/61 (72.13%), Query Frame = 0
BLAST of Clc04G05695 vs. ExPASy Swiss-Prot
Match: Q8GSM7 (Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana tabacum OX=4097 GN=HST PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 3.3e-11 Identity = 28/57 (49.12%), Postives = 42/57 (73.68%), Query Frame = 0
BLAST of Clc04G05695 vs. ExPASy Swiss-Prot
Match: G0LD36 (Rosmarinate synthase OS=Melissa officinalis OX=39338 GN=RAS PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 9.5e-11 Identity = 29/61 (47.54%), Postives = 39/61 (63.93%), Query Frame = 0
BLAST of Clc04G05695 vs. ExPASy Swiss-Prot
Match: Q0JBZ8 (Hydroxycinnamoyltransferase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HCT1 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.6e-10 Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 0
BLAST of Clc04G05695 vs. ExPASy Swiss-Prot
Match: Q6K638 (Hydroxycinnamoyltransferase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=HCT2 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 4.7e-10 Identity = 28/61 (45.90%), Postives = 41/61 (67.21%), Query Frame = 0
BLAST of Clc04G05695 vs. ExPASy TrEMBL
Match: A0A6J1DRJ9 (spermidine hydroxycinnamoyl transferase-like OS=Momordica charantia OX=3673 GN=LOC111023179 PE=3 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 4.9e-18 Identity = 42/59 (71.19%), Postives = 51/59 (86.44%), Query Frame = 0
BLAST of Clc04G05695 vs. ExPASy TrEMBL
Match: A0A0A0KZY3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G189010 PE=3 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.0e-16 Identity = 40/59 (67.80%), Postives = 47/59 (79.66%), Query Frame = 0
BLAST of Clc04G05695 vs. ExPASy TrEMBL
Match: A0A0A0KWD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G190020 PE=3 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.0e-16 Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 0
BLAST of Clc04G05695 vs. ExPASy TrEMBL
Match: A0A0A0KYM3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G190010 PE=3 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.0e-16 Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 0
BLAST of Clc04G05695 vs. ExPASy TrEMBL
Match: A0A6J1HNZ2 (spermidine hydroxycinnamoyl transferase-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466005 PE=3 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 7.8e-16 Identity = 38/63 (60.32%), Postives = 51/63 (80.95%), Query Frame = 0
BLAST of Clc04G05695 vs. TAIR 10
Match: AT5G48930.1 (hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase ) HSP 1 Score: 71.2 bits (173), Expect = 3.6e-13 Identity = 31/61 (50.82%), Postives = 44/61 (72.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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