Clc04G04970 (gene) Watermelon (cordophanus) v2

Overview
NameClc04G04970
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionProline-rich protein HaeIII subfamily 1-like
LocationClcChr04: 17392165 .. 17392830 (+)
RNA-Seq ExpressionClc04G04970
SyntenyClc04G04970
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTCAATTAGTTCTTGTAATGTGTTTTTCGCAGCTTGCGCTCTCATCCTCCTTGGGTTGCACGTTGCAATCTACCAAGCAGATGCTAAAAATGTTTTTGTAGACGTCGGAGGCTTCCCTATCATAGACAACGTATTGAGCGACCCGAGTATAAAACATCCGAAAAGGCATATCCGTTTCTCAACGGGGAAACCCAAGAGGGTACCTGACTTAGATCCACCTTCCAGCGTGGGAATACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGTCCAAGAACTTCGGACAATCCACCTCCCCCACCGCATGTCTCGTCCACCATTTTGCACAAGCAATCTAGCATCAACTTCGGAGTGTTACCGAAAGGTGAGCGTATTCCTCCGTCTGGGCCGAGCCAAAGAACTTCAGAGAGTCCACCTCCCCCGCCGCATGCCCCATCCGTCATTTTACACAAGGAATCTGGGATCAACTTTGGAATATTACCGAAAGGCGTGCGTATTCCACCGTCAGGGCCGAGTACAAGATCTTCGGACTATCCACCGCCCCCACCTCATGCTCCTTTCGTTATTTTAAAGAAAGAATCTAAGATTAGATTTGGGATGTATCCTAAAAATAACCCCATTCCACCATCTGCTCCAAGCGGACGCGTACCATCATGA

mRNA sequence

ATGGTGTCAATTAGTTCTTGTAATGTGTTTTTCGCAGCTTGCGCTCTCATCCTCCTTGGGTTGCACGTTGCAATCTACCAAGCAGATGCTAAAAATGTTTTTGTAGACGTCGGAGGCTTCCCTATCATAGACAACGTATTGAGCGACCCGAGTATAAAACATCCGAAAAGGCATATCCGTTTCTCAACGGGGAAACCCAAGAGGGTACCTGACTTAGATCCACCTTCCAGCGTGGGAATACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGTCCAAGAACTTCGGACAATCCACCTCCCCCACCGCATGTCTCGTCCACCATTTTGCACAAGCAATCTAGCATCAACTTCGGAGTGTTACCGAAAGGTGAGCGTATTCCTCCGTCTGGGCCGAGCCAAAGAACTTCAGAGAGTCCACCTCCCCCGCCGCATGCCCCATCCGTCATTTTACACAAGGAATCTGGGATCAACTTTGGAATATTACCGAAAGGCGTGCGTATTCCACCGTCAGGGCCGAGTACAAGATCTTCGGACTATCCACCGCCCCCACCTCATGCTCCTTTCGTTATTTTAAAGAAAGAATCTAAGATTAGATTTGGGATGTATCCTAAAAATAACCCCATTCCACCATCTGCTCCAAGCGGACGCGTACCATCATGA

Coding sequence (CDS)

ATGGTGTCAATTAGTTCTTGTAATGTGTTTTTCGCAGCTTGCGCTCTCATCCTCCTTGGGTTGCACGTTGCAATCTACCAAGCAGATGCTAAAAATGTTTTTGTAGACGTCGGAGGCTTCCCTATCATAGACAACGTATTGAGCGACCCGAGTATAAAACATCCGAAAAGGCATATCCGTTTCTCAACGGGGAAACCCAAGAGGGTACCTGACTTAGATCCACCTTCCAGCGTGGGAATACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGTCCAAGAACTTCGGACAATCCACCTCCCCCACCGCATGTCTCGTCCACCATTTTGCACAAGCAATCTAGCATCAACTTCGGAGTGTTACCGAAAGGTGAGCGTATTCCTCCGTCTGGGCCGAGCCAAAGAACTTCAGAGAGTCCACCTCCCCCGCCGCATGCCCCATCCGTCATTTTACACAAGGAATCTGGGATCAACTTTGGAATATTACCGAAAGGCGTGCGTATTCCACCGTCAGGGCCGAGTACAAGATCTTCGGACTATCCACCGCCCCCACCTCATGCTCCTTTCGTTATTTTAAAGAAAGAATCTAAGATTAGATTTGGGATGTATCCTAAAAATAACCCCATTCCACCATCTGCTCCAAGCGGACGCGTACCATCATGA

Protein sequence

MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKIRFGMYPKNNPIPPSAPSGRVPS
Homology
BLAST of Clc04G04970 vs. NCBI nr
Match: XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida])

HSP 1 Score: 270.0 bits (689), Expect = 1.8e-68
Identity = 142/192 (73.96%), Postives = 151/192 (78.65%), Query Frame = 0

Query: 1   MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIR 60
           MVSIS  NVFF ACA I LGLH  IYQ DAKNVFV   G   I+N LSD +IKHPKRHI 
Sbjct: 1   MVSISYSNVFFGACAFIFLGLHSTIYQTDAKNVFVVEKGDSTIENELSDENIKHPKRHIH 60

Query: 61  FSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFG 120
           FS GK KR+PDL PP ++GILSKEER  PSG S  TSDNPPPPPHV S ILHK+S INF 
Sbjct: 61  FSLGKYKRIPDLAPPFNLGILSKEERVPPSGLSQSTSDNPPPPPHVISIILHKESRINFR 120

Query: 121 VLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSD 180
           VL KG RIPPSGPSQRTSESPPPPPHA SVILHK+ GINFGILPK + IPPSGPS R S+
Sbjct: 121 VLSKGNRIPPSGPSQRTSESPPPPPHALSVILHKKPGINFGILPKSMHIPPSGPSKRFSN 180

Query: 181 YPPPPPHAPFVI 193
           YP PP HAP VI
Sbjct: 181 YPSPPTHAPSVI 192

BLAST of Clc04G04970 vs. NCBI nr
Match: KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 204.5 bits (519), Expect = 9.3e-49
Identity = 120/201 (59.70%), Postives = 139/201 (69.15%), Query Frame = 0

Query: 23  VAIYQADAKNVFVDVGGFPII-DNVLSDPSIKHPKR-HIRFSTGKPKRVPDLDPPSSV-- 82
           V +Y+ DAK V V+V  +  I +  L+D  +KHPK   I  S    + +  L PP  V  
Sbjct: 23  VQVYETDAKKV-VEVDVYDTIREEELTDQMVKHPKGISISSSRSSQRTLFHLTPPPPVVL 82

Query: 83  GILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTS 142
            +L K    +PSGPS RTSD PPPPP  SS IL KQS INFG+LPKG  IPPSGPSQRTS
Sbjct: 83  RMLPKGVPISPSGPSQRTSDYPPPPPRASSVILSKQSKINFGMLPKGVPIPPSGPSQRTS 142

Query: 143 ESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPP-HAPFVILKKES 202
           + PPPPP A SVIL+K+S INFG+LPKGV IPPSGPS R+S+YPPPPP HA  VIL  +S
Sbjct: 143 DYPPPPPRASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSNYPPPPPLHASSVILNTQS 202

Query: 203 KIRFGMYPKNNPIPPSAPSGR 219
           KI FGM PK  PIPPS PS R
Sbjct: 203 KINFGMLPKGVPIPPSGPSQR 222

BLAST of Clc04G04970 vs. NCBI nr
Match: KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 201.1 bits (510), Expect = 1.0e-47
Identity = 116/195 (59.49%), Postives = 138/195 (70.77%), Query Frame = 0

Query: 1   MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIR 60
           MVS+ + N+FF ACALI LGLH  IY  +AK  FV       ++NVL    I HPK+   
Sbjct: 1   MVSVGT-NIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAH 60

Query: 61  FSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFG 120
           FS  KPK++PDL PP S+GILSK  RT PSG S  TS+N PP PHV+  ILHK+S +NFG
Sbjct: 61  FSWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNN-PPSPHVAPIILHKESMVNFG 120

Query: 121 VLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSD 180
           +LPKG RIPPSGPS+RTS+ PPP  +  S+   KES I +GILPKGVRIPPSGPS R+SD
Sbjct: 121 ILPKGVRIPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRIPPSGPSKRNSD 180

Query: 181 YPPPPP---HAPFVI 193
           Y PPPP   HAP +I
Sbjct: 181 YYPPPPMHLHAPSII 190

BLAST of Clc04G04970 vs. NCBI nr
Match: KAA0043502.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK01137.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 186.0 bits (471), Expect = 3.4e-43
Identity = 106/192 (55.21%), Postives = 129/192 (67.19%), Query Frame = 0

Query: 1   MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIR 60
           M+SISS N+ F  CA++LLGLH  IYQ + +N+F       + +N L   SI HPK++I 
Sbjct: 1   MMSISS-NMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIH 60

Query: 61  FSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFG 120
           FS  K K  P+ D     GI SK+ R  PSGPS R+SD+PP P    S IL K+S INFG
Sbjct: 61  FSLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSP----SMILPKESRINFG 120

Query: 121 VLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSD 180
           +LPKG RIPPSGPSQR S+SP P    PS  LHK S + FG+LPKG  IPPSGPS R+SD
Sbjct: 121 ILPKGSRIPPSGPSQRFSDSPLP----PSTFLHKGSNMIFGMLPKGHHIPPSGPSKRTSD 180

Query: 181 YPPPPPHAPFVI 193
            PPPPPH+P +I
Sbjct: 181 NPPPPPHSPSLI 183

BLAST of Clc04G04970 vs. NCBI nr
Match: XP_022967687.1 (actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima])

HSP 1 Score: 185.7 bits (470), Expect = 4.5e-43
Identity = 112/198 (56.57%), Postives = 131/198 (66.16%), Query Frame = 0

Query: 25  IYQADAKNVF-VDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSS---VGI 84
           IY+ DAKNV  VDV    I +  L+D  +++PK     S+   +R      PS     G+
Sbjct: 185 IYETDAKNVVEVDVDD-NIREAELTDLIVQNPKGISISSSRSSQRTLFHRTPSPSLVFGM 244

Query: 85  LSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSES 144
           L K     PS PS RTSD PPPPP  SS IL+K S IN G+LP+G  IPPSGPSQRTS+ 
Sbjct: 245 LPKGVPIPPSRPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSGPSQRTSDY 304

Query: 145 PPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKIR 204
           PPPPPHA SVIL+K+S INFG+LPKGV IPPSGPS R+S YPPPPP A  VIL K+SKI 
Sbjct: 305 PPPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPPRASSVILNKQSKIY 364

Query: 205 FGMYPKNNPIPPSAPSGR 219
            GM P+  PIPP   S R
Sbjct: 365 LGMLPRGVPIPPPGLSQR 381

BLAST of Clc04G04970 vs. ExPASy TrEMBL
Match: A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 5.0e-48
Identity = 116/195 (59.49%), Postives = 138/195 (70.77%), Query Frame = 0

Query: 1   MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIR 60
           MVS+ + N+FF ACALI LGLH  IY  +AK  FV       ++NVL    I HPK+   
Sbjct: 1   MVSVGT-NIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAH 60

Query: 61  FSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFG 120
           FS  KPK++PDL PP S+GILSK  RT PSG S  TS+N PP PHV+  ILHK+S +NFG
Sbjct: 61  FSWPKPKKIPDLAPPFSLGILSKGIRTPPSGLSQGTSNN-PPSPHVAPIILHKESMVNFG 120

Query: 121 VLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSD 180
           +LPKG RIPPSGPS+RTS+ PPP  +  S+   KES I +GILPKGVRIPPSGPS R+SD
Sbjct: 121 ILPKGVRIPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRIPPSGPSKRNSD 180

Query: 181 YPPPPP---HAPFVI 193
           Y PPPP   HAP +I
Sbjct: 181 YYPPPPMHLHAPSII 190

BLAST of Clc04G04970 vs. ExPASy TrEMBL
Match: A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43
Identity = 106/192 (55.21%), Postives = 129/192 (67.19%), Query Frame = 0

Query: 1   MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIR 60
           M+SISS N+ F  CA++LLGLH  IYQ + +N+F       + +N L   SI HPK++I 
Sbjct: 1   MMSISS-NMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIH 60

Query: 61  FSTGKPKRVPDLDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFG 120
           FS  K K  P+ D     GI SK+ R  PSGPS R+SD+PP P    S IL K+S INFG
Sbjct: 61  FSLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSP----SMILPKESRINFG 120

Query: 121 VLPKGERIPPSGPSQRTSESPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSD 180
           +LPKG RIPPSGPSQR S+SP P    PS  LHK S + FG+LPKG  IPPSGPS R+SD
Sbjct: 121 ILPKGSRIPPSGPSQRFSDSPLP----PSTFLHKGSNMIFGMLPKGHHIPPSGPSKRTSD 180

Query: 181 YPPPPPHAPFVI 193
            PPPPPH+P +I
Sbjct: 181 NPPPPPHSPSLI 183

BLAST of Clc04G04970 vs. ExPASy TrEMBL
Match: A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 2.2e-43
Identity = 112/198 (56.57%), Postives = 131/198 (66.16%), Query Frame = 0

Query: 25  IYQADAKNVF-VDVGGFPIIDNVLSDPSIKHPKRHIRFSTGKPKRVPDLDPPSS---VGI 84
           IY+ DAKNV  VDV    I +  L+D  +++PK     S+   +R      PS     G+
Sbjct: 185 IYETDAKNVVEVDVDD-NIREAELTDLIVQNPKGISISSSRSSQRTLFHRTPSPSLVFGM 244

Query: 85  LSKEERTTPSGPSPRTSDNPPPPPHVSSTILHKQSSINFGVLPKGERIPPSGPSQRTSES 144
           L K     PS PS RTSD PPPPP  SS IL+K S IN G+LP+G  IPPSGPSQRTS+ 
Sbjct: 245 LPKGVPIPPSRPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSGPSQRTSDY 304

Query: 145 PPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKIR 204
           PPPPPHA SVIL+K+S INFG+LPKGV IPPSGPS R+S YPPPPP A  VIL K+SKI 
Sbjct: 305 PPPPPHASSVILNKQSKINFGMLPKGVPIPPSGPSQRTSXYPPPPPRASSVILNKQSKIY 364

Query: 205 FGMYPKNNPIPPSAPSGR 219
            GM P+  PIPP   S R
Sbjct: 365 LGMLPRGVPIPPPGLSQR 381

BLAST of Clc04G04970 vs. ExPASy TrEMBL
Match: A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 5.0e-32
Identity = 104/233 (44.64%), Postives = 124/233 (53.22%), Query Frame = 0

Query: 1   MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIR 60
           M+S SS NV F  CALILLGLH   Y  DA++  V   G  +I+N L+D  I+HPKRHIR
Sbjct: 8   MMSTSS-NVLFGTCALILLGLHFETYHIDARSFSVFGEGNYVIENQLTDHVIEHPKRHIR 67

Query: 61  FSTGKPKRVPDLDPPSSVGILSKEERTTPS---------------------GPSP-RTSD 120
           FS  KPKRVPDL PP S+GIL+K+  T PS                      P P R  D
Sbjct: 68  FSWPKPKRVPDLAPPFSLGILTKDILTPPSENELGDNIVKHPKSHIRFSWVWPKPKRVPD 127

Query: 121 NPPP------------PPHVS----STILHKQSSINF-----------------GVLPKG 179
             PP            PP  +    S   H ++ I F                 G+L K 
Sbjct: 128 LAPPFSLGILNNHLRNPPSENELGHSITKHPKNHIRFSWPKPKRVPDLAPPFSLGILLKD 187

BLAST of Clc04G04970 vs. ExPASy TrEMBL
Match: A0A5D3BVE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00110 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 3.6e-30
Identity = 102/233 (43.78%), Postives = 120/233 (51.50%), Query Frame = 0

Query: 1   MVSISSCNVFFAACALILLGLHVAIYQADAKNVFVDVGGFPIIDNVLSDPSIKHPKRHIR 60
           M+S SS NV F ACALILLG H   Y  DA+   V   G  +I+N L+D  I+HPKRHIR
Sbjct: 1   MMSTSS-NVLFGACALILLGFHFETYHIDARRFSVVGEGNYVIENQLTDHVIEHPKRHIR 60

Query: 61  FSTGKPKRVPDLDPPSSVGILSKEERTTPS---------------------GPSP-RTSD 120
           FS  KPKRVPDL PP S+GIL+K+  T PS                      P P R  D
Sbjct: 61  FSWPKPKRVPDLAPPFSLGILTKDVLTPPSENEVGDNIVKHPKNHIRFSWIWPKPKRVPD 120

Query: 121 NPPP------------PPHVS----STILHKQSSINF-----------------GVLPKG 179
             PP            PP  +    S   H +S I F                 G+L K 
Sbjct: 121 LAPPFSLGILNNHLRTPPSENELGHSITKHPKSHIRFSWPKPKRVPDLAPPFSLGILSKD 180

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038882352.11.8e-6873.96uncharacterized protein LOC120073615 [Benincasa hispida][more]
KAG6603169.19.3e-4959.70hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0040932.11.0e-4759.49proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK1060... [more]
KAA0043502.13.4e-4355.21proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK0113... [more]
XP_022967687.14.5e-4356.57actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CGG15.0e-4859.49Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A5D3BP861.7e-4355.21Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A6J1HRH72.2e-4356.57actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3... [more]
A0A5A7T8R05.0e-3244.64Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BVE53.6e-3043.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..190
NoneNo IPR availablePANTHERPTHR33599:SF13FORMIN-LIKE PROTEIN 20coord: 155..219
coord: 70..143
IPR039639Protein IDA-likePANTHERPTHR33599PROTEIN IDA-LIKE 5coord: 155..219
coord: 70..143

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc04G04970.1Clc04G04970.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010227 floral organ abscission