Clc04G02880 (gene) Watermelon (cordophanus) v2

Overview
NameClc04G02880
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC110412945
LocationClcChr04: 8544167 .. 8547851 (+)
RNA-Seq ExpressionClc04G02880
SyntenyClc04G02880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTAAGAGGAGGCTCAGTGCTGATGGACTCGAGAAGGCACGTGAGTTTCCCCAGGACCCAGTACTGATGGACATGAGAAGGTACTCGGGCAACCCGCCATATTCCTATGTGCACATAGAGGTTATATGCTAGTGCGTTGAGTTTTGCTTTGCATCAAGCCTTACTTATTTAACGTTAGGAGCGTTGAGTCTTGCTCCGCCTCAACTAAGGGAAAAGATTGAAAAACCAAACAGTTTTCTGTTTAAGCATTCTGGAAAACGATTCTATTGATTTGGAACGGATTTACAAGATTGACAAAGTTTTGTGGAAAATATGTTTATGTTGAATTATCGTGTTAAATCCTTGTTTTATATTTGCAAATGTAACATGCCTGTTTTCATATAAAGCTCGTTTACAAAAACTTTTCACTCACGGGGTTTTAGCTCACGTTTTCCTTTTTTTTTTTTAATTTTCCAGGTAGCGAGTGAGTTTGGGATACTTTGCCTACGCAATAACCTCGTCTGGGTCATCTTTGGTGAAAATGGTTGGACAGTGAGCCTTACAGAGGAGTCAAGGTTGCTGTCTTCACATCTCCTTTCGGGTTATGGAGGATAATCCGAGAAGGGGTGTGACACTTAAAGTATGATAAGATGAGACCCAATGTTGAAGGACATTGAGTAGGCATATTGATAAGCACTTGAAAAGTGCTTTCTATCCTTTCAAATTAAGGGAGTTTATATTAGATTTCACTTGTTTGCTAGTGGTTTTCAGGTTAAAATGAGGACAATTAGAAGAAAAGGCCAAAAGATCAAAACCGAGCAAGAATACGACGAAAAAGACACGAAAATCACAAAGTTGCCATAATTGAGGCAGCGCCGCGACGCTAAAATCAGAGAAGGTCTGCACAAGAATCTGCAACAGCGCTGCGGCACCGTCTGAAAAATTTCAATAGCACCGCGGCGCTATAGACCAGCGCTGTGGTGCCAGGTTACCATAAATGAAAAAATGTATTTTTGGAAAGATTTTTTGGGCAGAATACTCTATAAGTTTGGGGATTTCCAGCAGCCTTAAGAACAATTCAGAGCACAAAATTACAGACCTAAAAAGCCACAAGAAGAAGAGAATTAAGTGAGAGTTCATAGAAGAGTTCAAAGAGTGTGTTAGTTGCAAGGAAGAGGAAAAGAGTTCGAGATAGTCGTGGTGCCATTCGAATTCCGACGTGAGAGCCAAGGAGATCGTGACGGTGCTACCTCAATCAAGAGCCTCTTTTCAGTAGAGTTTCCCTTTCTTTACACTCTTTCTTTATTTATTTTGCTTAAACATGTTGCTTCAAGCTATGAGTGGCTAAACTCTTTAGTTTTAGGGTTTTGATGAATTGTTTGTGAATTTATGTTGATATTGTAGACTCTTATGGTTTTGTTGGAATGATTATGCTTTTCATTATTATTGTGTTTCATTCTTGTGGATTGGCCATCTTCACATGTTAGGTTAGATGTATGATTGAGAGATTGCATGTTTAACTTGATTTATAACAATGAATTGTTGTTAATCTATCACGAGAGTAGTTAGGTTGACAATAAAAGTTGCTAAAGACTATTCTTAATGCCATATAATTTGTATTGGTTTCAAGAGATTAGTAATCAATCGAGTTGCATGAGAAAGGGTTGTTTTTCAGAGAAAATAACTTGGAATTATGTTTCTAGACTTAGGCATATGATGACAATAAAATCCATGAAATCTATAGTATTGCATGATGAAATAAATAAGGATTCATTACCTAGAACTCTCTTTGATTCTTGTGTTTCTCACTTTATTACTTTCCTTATTTGGTTTTTATTTTCCATAACTCACAATATTAATTCCAATCCTCAAATAAAATTGATTCAAATCTAGAATAGCTAAGTAACTTAAACATTCACAATTGGATCTCTAGTTGAACGATTTTCGGACTTCATCGTCTTATATTATAACTTGACCCGTACAGTTGCGATTAACACTTAAAGTGCGCATCAAATTTTTGTTGCCATGCGGGGGATCCAAAGAACGGTTTTTGTTATTTAATATTCATTAGAATTGATAGATCTTAATTTGAGGTGTATATTACTTGGTTGATTATTTATATTATATTTTATTTTATTGTATTTTATATTTTTTTTTTCTTTTTTCTATTTTATTTTATTTCATTTTTATTTTTATTTTTTTTTGTCGGTTTATGCCTCAAGACAATACTAATATTCTCCCTCTTGATCCCGAGATTGAAAGGACGTGTAGAAGAAACCTAAGGGTTCAACACAATCACATCGAGGAGATGGCGGAGGAGATACCAAAGGCAATTCTAACGTAAAGATGAAAGGTGTTTCTAACGATGCAATTAAACTAAGACTTTTTCCTTTCTCTTTATAGGACCATGCAAAGGATTGGTTGGAAACCATACCTCCGGATAGCATCACAACGTGGGAGATCTTAGCTCAAGCTTTCATGAACAAATATTTTCCACCGACTAAATCTCAAAGACTAAGGATGGAGATTGGAACATTCCGCCACCTTGAGGATGAATAACTATATGAGGCTTAGTAGAGGTATAAGGATCTCTTGAGAAGATGCCCTCAACATGGTTACCCGGATTGTTTGCAAATTCAACTCTTCTACAATGGATTAGCAAGCTCAACCAAATCCATACTAGAATGCTCAAGAGGCGTATACCATACTAGAAGACTTGGCCACTACATCGTACAATTGGCCTTGTGAACGGTCTTCTCCAATCATTCCAAAAGCCATCGGAAGATATGAGATGGACGAGGTAAGTTCTCTAAAAGCTCAATTGGCTTCGCTCATTAATGCTTTATCTAAATTTTCTCAAGGAAGCCAAGTCCAAGCAAGTCCACCATCAATAGCTTCTCTTGCGGCCATGGCAAATCAACAAGAGCCAAGTGAGTTGGAGGTAGCCAATTATGTGGATAGAGGACAATACCGAGGTCAACAACAACTTTCAACTCGCTATCATCCCAACTTGAGGAATCATGAGAATTTTTCATATGCTAACAACAAGAATGTTTTGCAAGCACCTCAAGGATTCAATGGAGCGGGAAATGCAAAGACATCATTACTAGAGGACATAATGCTTGACTTTGTCAAAGAGTCAAGATCAAGGACAACCACATTGGAGAATTCGGTCAAGCTATTTCAAGCACTGTTCAAAAAGTAAGACAATTCAAAACTTGGAGGTTCAACTTAGTCAAATGACCACGTACCTCCAAACAATGCAAAAGGGTAAGTTCCCTAGTTGCCCTAAGAGAAACCCGAAGGAGGAATGCAAGGTCGTGACTTTGAGGAATGGAAAAAAGCTATCCACTCCTTTGATCAATGATGAAGATGATGAGCTTCCACAAGAAGAGGATGAAGCCATCATAGAGGATGTCCCACAAAAAAAGGGTGCATCTAAGGAAAAGGAGAAATCAAAGTCCAACATAGGGAGTAAGTAAGCCCCGTACTTGACCTTGTGAGAAGGCAAGTTAAGAAGAGACTAAGAGATGGGCGTTTAGTAGGAAAAGTTGGCCGAGTTGTGTGGGGGCAAAATTGTTAAGTATTGGCCATGCGTTGGTGGCACTATGCGTTGATGAAAGTAGTTTGGCGTGGACGCAGAGGTGAAGGAAGGCCATTAGGCGTTGAAGGCCACGAGATGTTGAAGGCCACGAGGCGTTGA

mRNA sequence

ATGTTTAAGAGGAGGCTCAGTGCTGATGGACTCGAGAAGGCACGTGAGTTTCCCCAGGACCCAGTACTGATGGACATGAGAAGGTACTCGGGCAACCCGCCATATTCCTATGTGCACATAGAGGTAGCGAGTGAGTTTGGGATACTTTGCCTACGCAATAACCTCGTCTGGGTCATCTTTGGTGAAAATGGTTGGACAGTGAGCCTTACAGAGGAGTCAAGCGCCGCGACGCTAAAATCAGAGAAGAATGCTCAAGAGGCGTATACCATACTAGAAGACTTGGCCACTACATCGTACAATTGGCCTTGTGAACGGTCTTCTCCAATCATTCCAAAAGCCATCGGAAGATATGAGATGGACGAGGTAAGTTCTCTAAAAGCTCAATTGGCTTCGCTCATTAATGCTTTATCTAAATTTTCTCAAGGAAGCCAAGTCCAAGCAAGTCCACCATCAATAGCTTCTCTTGCGGCCATGGCAAATCAACAAGAGCCAAGTGAGTTGGAGGTAGCCAATTATGTGGATAGAGGACAATACCGAGGTCAACAACAACTTTCAACTCGCTATCATCCCAACTTGAGGAATCATGAGAATTTTTCATATGCTAACAACAAGAATGTTTTGCAAGCACCTCAAGGATTCAATGGAGCGGGAAATGCAAAGACATCATTACTAGAGGACATAATGCTTGACTTTGTCAAAGAGTCAAGATCAAGGACAACCACATTGGAGAATTCGGTCAAGCTATTTCAAGCACTGTTCAAAAATTGCCCTAAGAGAAACCCGAAGGAGGAATGCAAGGTCGTGACTTTGAGGAATGGAAAAAAGCTATCCACTCCTTTGATCAATGATGAAGATGATGAGCTTCCACAAGAAGAGGATGAAGCCATCATAGAGGATGTCCCACAAAAAAAGGGTGCATCTAAGGAAAAGGAGAAATCAAAGTCCAACATAGGGATATTGGCCATGCGTTGGTGGCACTATGCGTTGATGAAAGTAGTTTGGCGTGGACGCAGAGGTGAAGGAAGGCCATTAGGCGTTGAAGGCCACGAGATGTTGAAGGCCACGAGGCGTTGA

Coding sequence (CDS)

ATGTTTAAGAGGAGGCTCAGTGCTGATGGACTCGAGAAGGCACGTGAGTTTCCCCAGGACCCAGTACTGATGGACATGAGAAGGTACTCGGGCAACCCGCCATATTCCTATGTGCACATAGAGGTAGCGAGTGAGTTTGGGATACTTTGCCTACGCAATAACCTCGTCTGGGTCATCTTTGGTGAAAATGGTTGGACAGTGAGCCTTACAGAGGAGTCAAGCGCCGCGACGCTAAAATCAGAGAAGAATGCTCAAGAGGCGTATACCATACTAGAAGACTTGGCCACTACATCGTACAATTGGCCTTGTGAACGGTCTTCTCCAATCATTCCAAAAGCCATCGGAAGATATGAGATGGACGAGGTAAGTTCTCTAAAAGCTCAATTGGCTTCGCTCATTAATGCTTTATCTAAATTTTCTCAAGGAAGCCAAGTCCAAGCAAGTCCACCATCAATAGCTTCTCTTGCGGCCATGGCAAATCAACAAGAGCCAAGTGAGTTGGAGGTAGCCAATTATGTGGATAGAGGACAATACCGAGGTCAACAACAACTTTCAACTCGCTATCATCCCAACTTGAGGAATCATGAGAATTTTTCATATGCTAACAACAAGAATGTTTTGCAAGCACCTCAAGGATTCAATGGAGCGGGAAATGCAAAGACATCATTACTAGAGGACATAATGCTTGACTTTGTCAAAGAGTCAAGATCAAGGACAACCACATTGGAGAATTCGGTCAAGCTATTTCAAGCACTGTTCAAAAATTGCCCTAAGAGAAACCCGAAGGAGGAATGCAAGGTCGTGACTTTGAGGAATGGAAAAAAGCTATCCACTCCTTTGATCAATGATGAAGATGATGAGCTTCCACAAGAAGAGGATGAAGCCATCATAGAGGATGTCCCACAAAAAAAGGGTGCATCTAAGGAAAAGGAGAAATCAAAGTCCAACATAGGGATATTGGCCATGCGTTGGTGGCACTATGCGTTGATGAAAGTAGTTTGGCGTGGACGCAGAGGTGAAGGAAGGCCATTAGGCGTTGAAGGCCACGAGATGTTGAAGGCCACGAGGCGTTGA

Protein sequence

MFKRRLSADGLEKAREFPQDPVLMDMRRYSGNPPYSYVHIEVASEFGILCLRNNLVWVIFGENGWTVSLTEESSAATLKSEKNAQEAYTILEDLATTSYNWPCERSSPIIPKAIGRYEMDEVSSLKAQLASLINALSKFSQGSQVQASPPSIASLAAMANQQEPSELEVANYVDRGQYRGQQQLSTRYHPNLRNHENFSYANNKNVLQAPQGFNGAGNAKTSLLEDIMLDFVKESRSRTTTLENSVKLFQALFKNCPKRNPKEECKVVTLRNGKKLSTPLINDEDDELPQEEDEAIIEDVPQKKGASKEKEKSKSNIGILAMRWWHYALMKVVWRGRRGEGRPLGVEGHEMLKATRR
Homology
BLAST of Clc04G02880 vs. NCBI nr
Match: WP_217833153.1 (retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002])

HSP 1 Score: 289.7 bits (740), Expect = 3.5e-74
Identity = 170/263 (64.64%), Postives = 192/263 (73.00%), Query Frame = 0

Query: 66  TVSLTEESSAATLKSEKNAQEAYTILEDLATTSYNWPCERSSPIIPKAIGRYEMDEVSSL 125
           T S+ + ++  ++ S KNAQEAYTILEDLATTSYNWPCER+SP IPKA G YE+DEV+SL
Sbjct: 228 TKSILDATAGGSIFS-KNAQEAYTILEDLATTSYNWPCERASPNIPKAAGLYEVDEVNSL 287

Query: 126 KAQLASLINALSKFSQGSQVQASPPSIASLAAMANQQ-EPSELEVANYVDRGQYRG--QQ 185
           KAQ+ASL NALSK + G Q Q +PPSIASLAA+A++     + E ANYVDRG YR    Q
Sbjct: 288 KAQMASLTNALSKLTAGGQAQTNPPSIASLAALASEMGVHGDNETANYVDRGHYRNYQHQ 347

Query: 186 QLSTRYHPNLRNHENFSYANNKNVLQAPQGFNGAGNAKTSLLEDIMLDFVKESRSRTTTL 245
           QL T YHPNLRNHENFSYANNKNVLQAPQGFNGAGNAKTS LEDIMLDFVKESRSRTTTL
Sbjct: 348 QLPTHYHPNLRNHENFSYANNKNVLQAPQGFNGAGNAKTSSLEDIMLDFVKESRSRTTTL 407

Query: 246 ENSV-----------KLFQAL------------------FKNCPKRNPKEECKVVTLRNG 297
           ENSV           K  Q L                  F +CP+ NP+EECK VTLR+G
Sbjct: 408 ENSVQAIASTVQSQGKALQNLEVQLSQMKTSLQTMQKGKFPSCPEINPREECKAVTLRSG 467

BLAST of Clc04G02880 vs. NCBI nr
Match: XP_022893883.1 (uncharacterized protein LOC111408348 [Olea europaea var. sylvestris])

HSP 1 Score: 126.7 bits (317), Expect = 4.0e-25
Identity = 95/270 (35.19%), Postives = 138/270 (51.11%), Query Frame = 0

Query: 72  ESSAATLKSEKNAQEAYTILEDLATTSYNWPCERSSPIIPKAIGRYEMDEVSSLKAQLAS 131
           +++A  +   K A+  Y +L+D+AT SY WP ERS   + K  G +E+D +++L AQ+AS
Sbjct: 3   DAAAGDILMAKTAEATYALLDDIATNSYQWPSERSG--VKKVAGLHEVDPITALAAQVAS 62

Query: 132 LINAL-SKFSQGSQVQASPPSIASLAAMANQQEPSELEVANYVDRGQY--RGQQQLSTRY 191
           L N + +  +QG+Q +    SI S ++   + E +  E A YV+   Y  RG  Q +  Y
Sbjct: 63  LTNQIVALTTQGNQQKVD--SIMSTSSSHQETEVAN-EQAQYVNSRNYNQRGSYQ-ANHY 122

Query: 192 HPNLRNHENFSYANNKNVLQAPQGFNGAGNAKTSLLEDIMLDFVKESR-------SRTTT 251
           HP LRNHEN SY NN+N LQ P GFN   +     LEDI+  F+ E+R       SR   
Sbjct: 123 HPALRNHENLSYGNNRNTLQPPPGFNTQNSDGKPPLEDILGTFISETRSRFNKDESRLDN 182

Query: 252 LENSVKLFQALFKNCPKR----------------------NPKEECKVVTLRNGKKLSTP 309
           +E  V    A  KN   +                      NPKE CK V LRNGK++   
Sbjct: 183 IETHVSNMGATMKNLEVQIDQLATSIKSQQKGKFPSDTEVNPKEHCKAVVLRNGKQVGES 242

BLAST of Clc04G02880 vs. NCBI nr
Match: XP_024020480.1 (uncharacterized protein LOC112091333 [Morus notabilis])

HSP 1 Score: 122.9 bits (307), Expect = 5.7e-24
Identity = 85/261 (32.57%), Postives = 138/261 (52.87%), Query Frame = 0

Query: 61  GENGWTVSLTEESSAATLKSEKNAQEAYTILEDLATTSYNWPCERSSPIIPKAIGRYEMD 120
           G NG + ++ + +++ +L + K+  EAY +LE+++T SY WP ERS P   K  G +E+D
Sbjct: 183 GLNGQSRTIVDSTASGSLMA-KSIPEAYNLLEEMSTNSYQWPSERSIP--KKTAGIHEVD 242

Query: 121 EVSSLKAQLASLINALSKFSQGSQVQASPPSIASLAAMANQQEPSELEVANYVDRGQYRG 180
            ++SL AQ+++L N ++  +   +  +S  ++A  + +  Q E ++ +V    +R     
Sbjct: 243 PLTSLSAQVSALSNQIAALT-NREASSSREAVAGASTLFAQDEYTQEQVQFVNNRNFNYK 302

Query: 181 QQQLSTRYHPNLRNHENFSYANNKNVLQAPQGFNGAGNAKTSLLEDIMLDFVKESRSRTT 240
             QL   YHP LRNHENFSYANN+NVLQ P GFN     K   +ED++  F+ E+R R  
Sbjct: 303 PNQLPNHYHPGLRNHENFSYANNRNVLQPPPGFNQQVVEKKPSVEDLLSTFIVETRGRFN 362

Query: 241 ----------------------------TLENSVK-LFQALFKNCPKRNPKEECKVVTLR 293
                                        L N+VK      F +  + NP + CK +TLR
Sbjct: 363 KDEARLDNIETHYNNMNATMKSLEVQIGQLANTVKGQSSGKFPSDTEPNPNDHCKAITLR 422

BLAST of Clc04G02880 vs. NCBI nr
Match: XP_022883717.1 (uncharacterized protein LOC111400543 [Olea europaea var. sylvestris])

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-22
Identity = 102/302 (33.77%), Postives = 145/302 (48.01%), Query Frame = 0

Query: 44  SEFGILCLRNNLVWV---IF--GENGWTVSLTEESSAATLKSEKNAQEAYTILEDLATTS 103
           S F +L   N   WV   IF  G N  T ++ +      L + K  +  Y +L+D+AT S
Sbjct: 77  STFHLLNQLNFAKWVQIEIFYNGLNEQTRTMVDAVVGGILMA-KIVEATYALLDDIATNS 136

Query: 104 YNWPCERSSPIIPKAIGRYEMDEVSSLKAQLASLINALSKFSQGSQVQASPPSIASLAAM 163
           Y WP ERS   + K  G +E+D + +L AQ+ASL N +   +  +Q Q    S+ S ++ 
Sbjct: 137 YQWPSERSG--VKKVAGLHEVDPIIALAAQVASLTNQIVTLT--TQDQQKVDSVMSTSSS 196

Query: 164 ANQQEPSELEVANYVDRGQY--RGQQQLSTRYHPNLRNHENFSYANNKNVLQAPQGFNGA 223
             + E +  E A YV+   Y  RG  Q +  YHP LRNHEN SY NN+N LQ P GFN  
Sbjct: 197 HQETEVAN-EQAQYVNSRNYTQRGSYQ-ANHYHPGLRNHENLSYGNNRNTLQPPPGFNTQ 256

Query: 224 GNAKTSLLEDIMLDFVKESRSRTT-------TLENSVKLFQALFKNCPKR---------- 283
            +     LEDI+  F+ E+RSR          +E  V    A  KN   +          
Sbjct: 257 NSDGKPPLEDILGTFISETRSRFNKDESRLGKIETHVSNMGATMKNLEVQIGQLATSMKS 316

Query: 284 ------------NPKEECKVVTLRNGKKLSTPLINDEDDELPQEEDEAIIED-VPQKKGA 309
                       NPKE CK V LR+GK++      ++ +  P +E E ++E+   Q KG 
Sbjct: 317 QQKGKFPSDTEVNPKEHCKAVVLRSGKQVGESEPTEDSNPTPDKEKEQVVEEQEKQAKGT 371

BLAST of Clc04G02880 vs. NCBI nr
Match: XP_022883666.1 (uncharacterized protein LOC111400483 [Olea europaea var. sylvestris])

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-22
Identity = 90/271 (33.21%), Postives = 134/271 (49.45%), Query Frame = 0

Query: 61  GENGWTVSLTEESSAATLKSEKNAQEAYTILEDLATTSYNWPCERSSPIIPKAIGRYEMD 120
           G NG T  + + ++   L + K A+ AY +L+D+AT SY WP ERS   + K  G +E+D
Sbjct: 184 GLNGQTRIMVDAAAGGILMA-KIAEAAYALLDDIATNSYQWPSERSG--VKKVAGLHEVD 243

Query: 121 EVSSLKAQLASLINAL-SKFSQGSQ--VQASPPSIASLAAMANQQEPSELEVANYVDRGQ 180
            +++L AQ+ASL N + +  +QG+Q  V  S  S      +AN+Q    +   NY  RG 
Sbjct: 244 PITALAAQVASLTNQIVTLTTQGNQQKVVMSTSSSHQETEVANEQ-AQYVNSRNYNKRGS 303

Query: 181 YRGQQQLSTRYHPNLRNHENFSYANNKNVLQAPQGFNGAGNAKTSLLEDIMLDFVKESR- 240
           Y+     +  YHP L+NHEN SY NN+N LQ P GFN   +     LEDI+  F+ E+R 
Sbjct: 304 YQ-----ANNYHPGLKNHENLSYGNNRNTLQPPPGFNTQNSDGKPPLEDILGTFISETRS 363

Query: 241 ------SRTTTLENSVKLFQALFKNCPKR----------------------NPKEECKVV 300
                 SR   +E       A  KN   +                       PKE CK +
Sbjct: 364 HFNKDESRLDNIETHASNMGATMKNLEVQIGQLATSMKSQQKEKFPSDTEVIPKEHCKAI 423

BLAST of Clc04G02880 vs. ExPASy TrEMBL
Match: A0A6P9DWY0 (uncharacterized protein LOC118344026 OS=Juglans regia OX=51240 GN=LOC118344026 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 6.0e-19
Identity = 81/253 (32.02%), Postives = 126/253 (49.80%), Query Frame = 0

Query: 61  GENGWTVSLTEESSAATLKSEKNAQEAYTILEDLATTSYNWPCERSSPIIPKAIGRYEMD 120
           G NG T ++ + +S  TL S K A+ A  +LE++A+ +Y WP ER+  +  K  G +E++
Sbjct: 26  GLNGQTQTIVDAASGGTLMS-KTAEGATYLLEEMASNNYQWPIERT--MTKKVAGIHELE 85

Query: 121 EVSSLKAQLASLINALSKFSQGSQVQASPPSIASLAAMANQQEPSELEVANYVDRG-QYR 180
            +++L AQ+ASL + +S  +   ++  S   +A+ +      E S+ +V    +R   YR
Sbjct: 86  PLAALSAQVASLSHQISALTT-QRIPQSAEYVAATSMTVPSNEASQEQVQYINNRNYNYR 145

Query: 181 GQQQLSTRYHPNLRNHENFSYANNKNVLQAPQGFNGAGNAKTSLLEDIMLDFVKESR--- 240
           G   +   YH  LRNHEN SY N KNVLQ   GF+   + K   LED M+ FV+E+    
Sbjct: 146 G-NPMPNYYHLGLRNHENLSYKNTKNVLQPHPGFDSQPSEKKISLEDAMVSFVEETNTRF 205

Query: 241 ----SRTTTLENSVKLFQALFKNCPKR----------------------NPKEECKVVTL 284
               SR   +E       A  KN   +                      NP+E+CK +TL
Sbjct: 206 KKTDSRLDNIETHCSNMGAAIKNIEVQIGQLATTINAQQRGTFPSNTEVNPREQCKAITL 265

BLAST of Clc04G02880 vs. ExPASy TrEMBL
Match: A0A2P5B7D3 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_330330 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-16
Identity = 65/175 (37.14%), Postives = 95/175 (54.29%), Query Frame = 0

Query: 69  LTEESSAATLKSEKNAQEAYTILEDLATTSYNWPCERSSPIIPKAIGRYEMDEVSSLKAQ 128
           + + ++  TL S K   EA   LE++A+ +Y WP ERS  I+ +     E+D ++ L AQ
Sbjct: 4   IVDAAAGGTLLS-KTTDEAQLSLEEMASNNYQWPNERS--ILKRVANVNEVDPITDLTAQ 63

Query: 129 LASLINALSKFSQGSQVQASPPSIASLAAMANQQEPSELEVANYVDRGQYRGQ-----QQ 188
           +++L + +S  +      +  P   S A+  N     +LE  NY++   +  Q       
Sbjct: 64  VSALTSQISALTTREAQSSREPMGVSNASFGN--NGCDLEQVNYLNNQNFNYQGNNMSNN 123

Query: 189 LSTRYHPNLRNHENFSYANNKNVLQAPQGFNGAGNAKTSLLEDIMLDFVKESRSR 239
           L T YHP+LRNHENFSYANN+NVLQ P G N     K   LEDI+  F+ E+R R
Sbjct: 124 LPTHYHPSLRNHENFSYANNRNVLQPPPGLNLPVVEKKPSLEDILSTFILETRGR 173

BLAST of Clc04G02880 vs. ExPASy TrEMBL
Match: A0A2I4FP56 (uncharacterized protein LOC109000837 OS=Juglans regia OX=51240 GN=LOC109000837 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.4e-15
Identity = 73/249 (29.32%), Postives = 120/249 (48.19%), Query Frame = 0

Query: 63  NGWTVSLTEESSAATLKSEKNAQEAYTILEDLATTSYNWPCERSSPIIPKAIGRYEMDEV 122
           NG T +  + +S   L S K A+    +LE++A+++Y WP +R+     K  G +E++ +
Sbjct: 63  NGQTQTTVDATSGGILMS-KTAEGVTYLLEEMASSNYQWPTKRTR--AKKVAGIHELEPL 122

Query: 123 SSLKAQLASLINALSK-FSQGSQVQASPPSIASLAAMANQQEPSELEVANYVDRGQYRGQ 182
           +++ AQ+A+L + +S   +Q     A   +  S+   +N+    +++  N      YRG 
Sbjct: 123 AAISAQVATLSHQISALITQRIPQSAEYVAATSMTIPSNEASQEQVQYINN-QNYNYRG- 182

Query: 183 QQLSTRYHPNLRNHENFSYANNKNVL--QAPQGFNGAGNAKTSLLEDIMLDFV------- 242
             +   +HP LRNHEN SY N KNVL  Q P GFN   + K   LE+ M+ FV       
Sbjct: 183 NPMPNHFHPGLRNHENLSYGNTKNVLQPQPPSGFNSQSSKKKMSLENAMISFVEETNAKF 242

Query: 243 KESRSRTTTLENSVKLFQALFKNCPKR----------------------NPKEECKVVTL 280
           KE+ S+   +E      +A  KN   +                      NP E+ K +TL
Sbjct: 243 KETDSQLDNIETHCSNMRAAIKNIEVQIGQLATTINAQQRETFPSNTEVNPNEQSKAITL 302

BLAST of Clc04G02880 vs. ExPASy TrEMBL
Match: A0A2P5B1T0 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_279370 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.1e-15
Identity = 71/220 (32.27%), Postives = 104/220 (47.27%), Query Frame = 0

Query: 94  LATTSYNWPCERSSPIIPKAIGRYEMDEVSSLKAQLASLINALSKFSQGSQVQASPPSIA 153
           +A+ +Y WP E S  I+ +     E+D +++L AQ+++L + +S  +      +      
Sbjct: 1   MASNNYQWPNEWS--ILNRIANVNEVDPITNLTAQVSTLTSQISILTTRKAQSSRESMGV 60

Query: 154 SLAAMANQQEPSELEVANYVDRG--QYRGQQQLS---TRYHPNLRNHENFSYANNKNVLQ 213
           S A+  N  +  +L   NY++     YRG   L+   T YHP L NHENFSY NN+NVLQ
Sbjct: 61  SNASFGN--DGGDLGQVNYLNNWNFNYRGNNMLNNLPTHYHPGLCNHENFSYTNNRNVLQ 120

Query: 214 APQGFNGAGNAKTSLLEDIMLDFVKESRSRTTTLE------------------------- 273
            P G N +   K   LEDI+  F+ E+R R    E                         
Sbjct: 121 PPSGLNQSVAEKKPSLEDILSTFIMETRGRFKKYEACLDNIENHCNNMNATIKSLEVQIG 180

Query: 274 ---NSVK-LFQALFKNCPKRNPKEECKVVTLRNGKKLSTP 280
              NS+K      F N  + NPK  CK +TLR+GK++  P
Sbjct: 181 QLANSIKGQISGKFPNDTETNPKYHCKAITLRSGKEVEAP 216

BLAST of Clc04G02880 vs. ExPASy TrEMBL
Match: A0A2I4G4Q3 (uncharacterized protein LOC109004712 OS=Juglans regia OX=51240 GN=LOC109004712 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.9e-15
Identity = 75/258 (29.07%), Postives = 128/258 (49.61%), Query Frame = 0

Query: 61  GENGWTVSLTEESSAATLKSEKNAQEAYTILEDLATTSYNWPCERSSPIIPKAIGR-YEM 120
           G NG T ++ +++S  TL   K  + A  +LE++A+ +Y WP ER+   + K + R +E+
Sbjct: 133 GLNGHTRTIVDDTSGGTLML-KTIEGATYLLEEMASNNYQWPIERT---MAKKVARIHEL 192

Query: 121 DEVSSLKAQLASLINALSKFSQGSQVQASPPSIA-SLAAMANQQEPSELEVANYVDRGQY 180
           + +++L AQ+A+L + +S  +     Q++   +A S+  ++N+    +++  N  +R   
Sbjct: 193 EPLAALSAQVATLSHQISALTTQRIPQSAEYVVATSMTVLSNEVSQEQVQYIN--NRNYN 252

Query: 181 RGQQQLSTRYHPNLRNHENFSYANNKNVL--QAPQGFNGAGNAKTSLLEDIMLDFVKESR 240
                +   YHP  +NHEN SY N KNVL  Q P GF+   + K   LED M+ F++E+ 
Sbjct: 253 YCGNPMPNYYHPGFQNHENLSYENTKNVLQPQPPPGFDSQSSEKKMSLEDAMISFIQETN 312

Query: 241 -------SRTTTLENSVKLFQALFK--------------NCPKR---------NPKEECK 285
                  SR   +E       A  K              N  +R         NP+E+CK
Sbjct: 313 ARFKKTDSRLDNIETHCSNMGAAIKKNIEVQIGQLATTINAQQRGTFPSNTEVNPREQCK 372

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
WP_217833153.13.5e-7464.64retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 70... [more]
XP_022893883.14.0e-2535.19uncharacterized protein LOC111408348 [Olea europaea var. sylvestris][more]
XP_024020480.15.7e-2432.57uncharacterized protein LOC112091333 [Morus notabilis][more]
XP_022883717.11.1e-2233.77uncharacterized protein LOC111400543 [Olea europaea var. sylvestris][more]
XP_022883666.11.4e-2233.21uncharacterized protein LOC111400483 [Olea europaea var. sylvestris][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6P9DWY06.0e-1932.02uncharacterized protein LOC118344026 OS=Juglans regia OX=51240 GN=LOC118344026 P... [more]
A0A2P5B7D31.2e-1637.14Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_330... [more]
A0A2I4FP562.4e-1529.32uncharacterized protein LOC109000837 OS=Juglans regia OX=51240 GN=LOC109000837 P... [more]
A0A2P5B1T03.1e-1532.27Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_279370 PE... [more]
A0A2I4G4Q36.9e-1529.07uncharacterized protein LOC109004712 OS=Juglans regia OX=51240 GN=LOC109004712 P... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc04G02880.1Clc04G02880.1mRNA