Clc04G01310 (gene) Watermelon (cordophanus) v2

Overview


Name	Clc04G01310
Type	gene
Organism	Citrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Description	S-protein homolog
Location	ClcChr04: 3718809 .. 3721321 (-)
RNA-Seq Expression	Clc04G01310
Synteny	Clc04G01310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTCATCTCCCACACTTGCACTATCTTTATTAATCTTATTTTTCACTAGCTTACATGCAATCCAAGGAGCATTCTTAATTCCACCCAAAACAACAGTCACCATCGTCAACCAAATTGAATATGGCATACCAATCACCGTTCACTGCAAATCAAAGAACGATGACCTAGGACTCCATGTCCTTCCGCTTGGACAAAGCTACTCGTTCAAGTTTAGACCCAACCTCTTGGGTACAACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACCACAAGAGAGATGCAGGGCTTTGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAGAACCCAAAAACCGCCGACGGCAAACAAATTTGCTATAACTACGGAGATAAAGAGCCAAGCATTATGTAATGAACTGTTTACGAATTAAGTATTTAGCATGCACTTGTTTTGCAAGTGCTTAAATTCCATTCCAATAAACTATAATAAAATAAGATCACAAACAACTTATAATTTCGCTCCTTTACTCTCACTCTCCCTCTCTCGGGGTAATGCAAAGGCAATATCTTCCGCTTAAGTTGTTGTTTCCCACATGCTCATAGCATACTTAAAAATCTTTAACAAACCGTTATATAATTGAAATATTTCTTTTGCCATCAAACTCCATCTTCCATATCAAAGGCGCCTTTTCCAGTCGTTCACCAGAAAAAAAAAAAAAAAAAAAGATATTATCGTTCTTCATTTTGATCAACTTTGCATCTCGAGGGTCGGTATTTTTAATGATCGAATCGATGTAATTCCAAATGTATAAGAATTTCACGCACGAACTTCAGCATGTAATGATCGTAAAAAATGTTGATACGATTTTTGGTGTGCTTTCTCATATACGTTGATCGAATAACCATATGACAAAAGAACTTTCTTCAAACGCAACGTATGAAGCATTTAAAGGTCGGGACTAAAGTTATTCAAATATGACAAGTGAAGATCAGACTAAACTATTAGTCGATAAGTCTCAAAGACAAAAGGCTTGGTTGATATTTGAAATAAGAGTGTAGGAACTAGATTTTTATTCGACTAACCATTCGAATAAATGTTTCAATAGTGTTGGCAAGTAACTATTTAATGAACCAATGTACCGATTTTAAACATATCCTCTAACTTACGGGAATTAAAGATTTCAAAGTTTGGAGACACTCTTCGATTCCTTGAACTGCCATACGATTTAAAACCCTTTCATATATGCAGGTACTAATAGTAGTCCACAGTTATTTTTCTTTAGAAAAACATGTTCATCTTACAAAGTTTCTCATTGAGACATACGGCAAACGTAACATTGTTCGTGAAATAATAATAAGATTTTTCAAAATACAAGTTTATTTTTCAAATATGTTACATTTATTTCAGAAATTGTTGGTTAAAATATTTTATTGTCAGGGAAAACAATTAACATCATCAAGAAAATAAAAAGCACAAAACACATCTGACATAGAAAATATAAATTTTTTATGTAGTATTGTATTTGAAAACTTCCCAGAAAATATCTTTCTTTAATCATACACAATTTAACCTAAGAAACAATTACTTATTTATTATTATTATTATTTTTTTTTTGACGAAAAAAAAAGACAAAAAGGTAATAATTTTGAAAACATAATCAAACCTTCATTGATTACAAGGTTATAAAATTGAACATTTATTTATTATTATTATTTTTTTGTTTAATCAGTTTTAAAGATTCAATGTTCTCTCCTTTTTTTTTTAAAGCCAATTAAATAGCACCAATTTATGCCAACCAAAGGAAATTGTATTCGTTTCTTTTGTTTTGTACAAACGTTTTGAACAATAACAACGATGATAAAAATGGTAATTGAAATCCACCCAACTTTTTGGCTACAAACGATAAGACAATTTATTTCTTTTCTCCGACCCTATAAATATATAAACTATTTCTAGCACTTCCCATTCATTCCAACACAATCAAAGGCATAAAGCGTTCATATTCTTCTCTCTCCGTTTGTTTTTCAACTGACGCCGTAAGCATGGGCTCATCTCCCACACTTGCACTATCTTTATTAATCTTATTTTTCACTAGCTTACATGCCATCCAAGGAGCATTCTTAATTCCACCCGAAACAATAGTCACCATCGTCAACCAAATTGAATATGGCATACCAGTCACCGTTCACTGCAAATCCAAGAACGATGACCTAGGACTCCATGTCCTTCCACTTGCAAAAAGCTACTCGTTCAAGTTCAGACCCAACCTCTTGGAGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACTGGTTCAATGCCTTCGACCACAAGAGAAATACAGGGTTTTGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAGAACCCAAAAACTGCCGACGGCAAACAAATTTGCTATAACTACGGAGATAAAGAGCCAAGCATTATGTAA

mRNA sequence

ATGGGCTCATCTCCCACACTTGCACTATCTTTATTAATCTTATTTTTCACTAGCTTACATGCAATCCAAGGAGCATTCTTAATTCCACCCAAAACAACAGTCACCATCGTCAACCAAATTGAATATGGCATACCAATCACCGTTCACTGCAAATCAAAGAACGATGACCTAGGACTCCATGTCCTTCCGCTTGGACAAAGCTACTCGTTCAAGTTTAGACCCAACCTCTTGGGTACAACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACCACAAGAGAGATGCAGGGCTTTGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAGAACCCAAAAACCGCCGACGGCAAACAAATTTGCTATAACTACGGAGATAAAGAGCCAAGCATTATCTTACATGCCATCCAAGGAGCATTCTTAATTCCACCCGAAACAATAGTCACCATCGTCAACCAAATTGAATATGGCATACCAGTCACCGTTCACTGCAAATCCAAGAACGATGACCTAGGACTCCATGTCCTTCCACTTGCAAAAAGCTACTCGTTCAAGTTCAGACCCAACCTCTTGGAGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACTGGTTCAATGCCTTCGACCACAAGAGAAATACAGGGTTTTGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAGAACCCAAAAACTGCCGACGGCAAACAAATTTGCTATAACTACGGAGATAAAGAGCCAAGCATTATGTAA

Coding sequence (CDS)

ATGGGCTCATCTCCCACACTTGCACTATCTTTATTAATCTTATTTTTCACTAGCTTACATGCAATCCAAGGAGCATTCTTAATTCCACCCAAAACAACAGTCACCATCGTCAACCAAATTGAATATGGCATACCAATCACCGTTCACTGCAAATCAAAGAACGATGACCTAGGACTCCATGTCCTTCCGCTTGGACAAAGCTACTCGTTCAAGTTTAGACCCAACCTCTTGGGTACAACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACTGGTTCAATGTCTTCGACCACAAGAGAGATGCAGGGCTTTGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAGAACCCAAAAACCGCCGACGGCAAACAAATTTGCTATAACTACGGAGATAAAGAGCCAAGCATTATCTTACATGCCATCCAAGGAGCATTCTTAATTCCACCCGAAACAATAGTCACCATCGTCAACCAAATTGAATATGGCATACCAGTCACCGTTCACTGCAAATCCAAGAACGATGACCTAGGACTCCATGTCCTTCCACTTGCAAAAAGCTACTCGTTCAAGTTCAGACCCAACCTCTTGGAGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACTGGTTCAATGCCTTCGACCACAAGAGAAATACAGGGTTTTGCACCACATGCACATGGATCATTCATGAATATAGCATGTGCTTGCAGAACCCAAAAACTGCCGACGGCAAACAAATTTGCTATAACTACGGAGATAAAGAGCCAAGCATTATGTAA

Protein sequence

MGSSPTLALSLLILFFTSLHAIQGAFLIPPKTTVTIVNQIEYGIPITVHCKSKNDDLGLHVLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMCLQNPKTADGKQICYNYGDKEPSIILHAIQGAFLIPPETIVTIVNQIEYGIPVTVHCKSKNDDLGLHVLPLAKSYSFKFRPNLLETTLFYCSFVWTGQHQIYWFNAFDHKRNTGFCTTCTWIIHEYSMCLQNPKTADGKQICYNYGDKEPSIM

Homology

[Close]

BLAST of Clc04G01310 vs. NCBI nr
Match: KGN55015.2 (hypothetical protein Csa_011982, partial [Cucumis sativus])

HSP 1 Score: 261.2 bits (666), Expect = 1.0e-65
Identity = 121/147 (82.31%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPKTTVTIVNQIEYGIPITVHCKSKNDDLGLH 60
           MGSSPTLALSLLILF  +L AIQG+  I P TTV I NQIEYGIP+TVHCKSKNDDLG+H
Sbjct: 40  MGSSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 99

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFNVFD KRDAG CTTCTWIIHEYS
Sbjct: 100 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYS 159

Query: 121 MCLQNPKTADGKQICYNYGDKEPSIIL 148
           MCLQ+PK   GK+ICYNYGDKEP II+
Sbjct: 160 MCLQDPKN-PGKEICYNYGDKEPGIIV 185

[Close]

BLAST of Clc04G01310 vs. NCBI nr
Match: KAA0045871.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 261.2 bits (666), Expect = 1.0e-65
Identity = 122/150 (81.33%), Postives = 130/150 (86.67%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPKTTVTIVNQIEYGIPITVHCKSKNDDLGLH 60
           MGSSPTLALSLLILF  +L AIQG+  I P TTV IVNQIEYGIP+TVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLILFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSIILHAI 151
           MCLQ+PK   GK ICYNYGDKEPSI L  I
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIALDNI 149

[Close]

BLAST of Clc04G01310 vs. NCBI nr
Match: KGN55010.2 (hypothetical protein Csa_012448 [Cucumis sativus])

HSP 1 Score: 259.6 bits (662), Expect = 3.0e-65
Identity = 120/147 (81.63%), Postives = 129/147 (87.76%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPKTTVTIVNQIEYGIPITVHCKSKNDDLGLH 60
           MGSSPTLALSLLI F  +L AIQG+  I P TTV I NQIEYGIP+TVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLIFFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFNVFD KRDAG CTTCTWIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSIIL 148
           MCLQ+PK   GK+ICYNYGDKEP II+
Sbjct: 121 MCLQDPKN-PGKEICYNYGDKEPGIIV 146

[Close]

BLAST of Clc04G01310 vs. NCBI nr
Match: TYK08032.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 259.2 bits (661), Expect = 3.9e-65
Identity = 118/146 (80.82%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPKTTVTIVNQIEYGIPITVHCKSKNDDLGLH 60
           MGSSPTLALSLLI F  +LH IQG+  I P TTV IVNQIEYGIP+TVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLIFFLCNLHTIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CS  WTGQHQIYWFN+FD KRDAG CTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSITWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSII 147
           MCLQ+PK   GK ICYNYGDKEPSI+
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01310 vs. NCBI nr
Match: KAA0063208.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK13715.1 self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 259.2 bits (661), Expect = 3.9e-65
Identity = 119/146 (81.51%), Postives = 128/146 (87.67%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPKTTVTIVNQIEYGIPITVHCKSKNDDLGLH 60
           MGSSPTLALSLLI F  +L AIQG+  I P TTV IVNQIEYGIP+TVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSII 147
           MCLQ+PK   GK ICYNYGDKEPSI+
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01310 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-20
Identity = 49/113 (43.36%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 12  LILFFTSLHAIQGAFLIPP--KTTVTIVNQIEYGIPITVHCKSKNDDLGLHVLPLGQSYS 71
           ++ FF  L    G   +PP  + TV  +  +  G P+T+HCKSK DDLG+HV+P  Q Y 
Sbjct: 6   IVCFFFFLLFGSGYGGLPPFWRATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYH 65

Query: 72  FKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMC 123
           FKF+PNL  +TLF+CSF W  Q +   F+++D +RD G+C  C W I     C
Sbjct: 66  FKFQPNLWKSTLFFCSFQWDSQFKS--FDIYDAQRDQGICDDCQWEIKPDGPC 116

[Close]

BLAST of Clc04G01310 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.6e-19
Identity = 50/119 (42.02%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 31  KTTVTIVNQIEYGIPITVHCKSKNDDLGLHVLPLGQSYSFKFRPNLL-GTTLFYCSFVWT 90
           K+ VTI N++  G  + +HCKS +DDLGL +L    S+SFKFRP+++ G TLF+C F W 
Sbjct: 37  KSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWP 96

Query: 91  GQHQIYWFNVFDHKRDA---GL-CTTCTWIIHEYSMCLQNPKTADGKQICYNYGDKEPS 145
           GQ +  WFN++D  RD    G+ C  C W I +Y  C +  +  D   ICY++     S
Sbjct: 97  GQSK--WFNIYDDDRDGVRMGIPCIYCIWDIGKYGPC-RFSEIDDAFNICYDWNGNRRS 152

[Close]

BLAST of Clc04G01310 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 5.4e-17
Identity = 46/123 (37.40%), Postives = 71/123 (57.72%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPKTTVTIVNQIEYGIPITVHCKSKNDDLGLH 60
           M +S  + + L I+ F  + +  G +    KT VT+ N I     +T+ C+SK+DDLG H
Sbjct: 1   MKNSSKIFVVLSIILFYVISSCHG-YNPFAKTVVTVTNNISPQTTLTISCRSKDDDLGEH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           +L  GQ++ +KFRP+   TTLF C F+W   + + WF+ +   RD G C +C W I+  S
Sbjct: 61  LLLHGQAFLWKFRPSWFRTTLFTCKFLW--NNNVKWFDTYRSDRDQGHCYSCNWSINADS 120

Query: 121 MCL 124
            C+
Sbjct: 121 ACI 120

[Close]

BLAST of Clc04G01310 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.6e-16
Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 0


Query: 34  VTIVNQIEYGIPITVHCKSKNDDLGLHVLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQ 93
           V I N++  G+ + +HCKS +DDLGL +L    S+SFKFR +++GTTLFYC F W GQ +
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 94  IYWFNVFDHKRDAG----LCTTCTWIIHEYSMCLQNPKTADGKQICYNY 139
              F+++D  RD       C  C W I     C+ + ++     ICY++
Sbjct: 99  --RFDIYDDDRDGVRSHISCINCIWDISIQGPCMFS-ESDHAFNICYDW 144

[Close]

BLAST of Clc04G01310 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 8.9e-12
Identity = 40/111 (36.04%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 31  KTTVTIVNQIEYGIPITVHCKSKNDDLGLHVLPLGQSYSFKFRPNLLGTTLFYCSFVWTG 90
           K TV I N +   + +  HCKSK+DDLG   L  G+S+SF F     G TL++CSF W  
Sbjct: 47  KRTVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSW-- 106

Query: 91  QHQIYWFNVFDHKRDAG---LCTT--CTWIIHEYSMCLQNPKTADGKQICY 137
            ++ + F+++   RD+G    C +  C W I     C  N +T     +CY
Sbjct: 107 PNESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQ-FDLCY 154

[Close]

BLAST of Clc04G01310 vs. ExPASy TrEMBL
Match: A0A5A7TWM4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004070 PE=3 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 5.0e-66
Identity = 122/150 (81.33%), Postives = 130/150 (86.67%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPKTTVTIVNQIEYGIPITVHCKSKNDDLGLH 60
           MGSSPTLALSLLILF  +L AIQG+  I P TTV IVNQIEYGIP+TVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLILFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSIILHAI 151
           MCLQ+PK   GK ICYNYGDKEPSI L  I
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIALDNI 149

[Close]

BLAST of Clc04G01310 vs. ExPASy TrEMBL
Match: A0A5D3CQ97 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002410 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.9e-65
Identity = 119/146 (81.51%), Postives = 128/146 (87.67%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPKTTVTIVNQIEYGIPITVHCKSKNDDLGLH 60
           MGSSPTLALSLLI F  +L AIQG+  I P TTV IVNQIEYGIP+TVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSII 147
           MCLQ+PK   GK ICYNYGDKEPSI+
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01310 vs. ExPASy TrEMBL
Match: A0A5D3C9Q3 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001780 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.9e-65
Identity = 118/146 (80.82%), Postives = 127/146 (86.99%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPKTTVTIVNQIEYGIPITVHCKSKNDDLGLH 60
           MGSSPTLALSLLI F  +LH IQG+  I P TTV IVNQIEYGIP+TVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLIFFLCNLHTIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CS  WTGQHQIYWFN+FD KRDAG CTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSITWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSII 147
           MCLQ+PK   GK ICYNYGDKEPSI+
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01310 vs. ExPASy TrEMBL
Match: A0A5D3CTD8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002420 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.9e-65
Identity = 118/146 (80.82%), Postives = 128/146 (87.67%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPKTTVTIVNQIEYGIPITVHCKSKNDDLGLH 60
           MGSSPTLALSLLI F  ++ AIQG+  I P TTV IVNQIEYGIP+TVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLIFFLCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSII 147
           MCLQ+PK   GK ICYNYGDKEPSI+
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01310 vs. ExPASy TrEMBL
Match: A0A5D3CQA2 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00110 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.9e-65
Identity = 119/146 (81.51%), Postives = 128/146 (87.67%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPKTTVTIVNQIEYGIPITVHCKSKNDDLGLH 60
           MGSSPTLALSLLI F  +L AIQG+  I P TTV IVNQIEYGIP+TVHCKSKNDDLG+H
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYS 120
           VLPLGQ YSFKFRPNL+GTTLF+CSF WTGQHQIYWFN+FD KRDAG CTTC WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 MCLQNPKTADGKQICYNYGDKEPSII 147
           MCLQ+P T  GK ICYNYGDKEPSI+
Sbjct: 121 MCLQDP-TNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of Clc04G01310 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 101.7 bits (252), Expect = 9.8e-22
Identity = 49/113 (43.36%), Postives = 68/113 (60.18%), Query Frame = 0


Query: 12  LILFFTSLHAIQGAFLIPP--KTTVTIVNQIEYGIPITVHCKSKNDDLGLHVLPLGQSYS 71
           ++ FF  L    G   +PP  + TV  +  +  G P+T+HCKSK DDLG+HV+P  Q Y 
Sbjct: 6   IVCFFFFLLFGSGYGGLPPFWRATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYH 65

Query: 72  FKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGLCTTCTWIIHEYSMC 123
           FKF+PNL  +TLF+CSF W  Q +   F+++D +RD G+C  C W I     C
Sbjct: 66  FKFQPNLWKSTLFFCSFQWDSQFKS--FDIYDAQRDQGICDDCQWEIKPDGPC 116

[Close]

BLAST of Clc04G01310 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 97.4 bits (241), Expect = 1.8e-20
Identity = 50/119 (42.02%), Postives = 71/119 (59.66%), Query Frame = 0


Query: 31  KTTVTIVNQIEYGIPITVHCKSKNDDLGLHVLPLGQSYSFKFRPNLL-GTTLFYCSFVWT 90
           K+ VTI N++  G  + +HCKS +DDLGL +L    S+SFKFRP+++ G TLF+C F W 
Sbjct: 37  KSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWP 96

Query: 91  GQHQIYWFNVFDHKRDA---GL-CTTCTWIIHEYSMCLQNPKTADGKQICYNYGDKEPS 145
           GQ +  WFN++D  RD    G+ C  C W I +Y  C +  +  D   ICY++     S
Sbjct: 97  GQSK--WFNIYDDDRDGVRMGIPCIYCIWDIGKYGPC-RFSEIDDAFNICYDWNGNRRS 152

[Close]

BLAST of Clc04G01310 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 90.5 bits (223), Expect = 2.3e-18
Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 30  PKTTVTIVNQIEYGIPITVHCKSKNDDLGLHVLPLGQSYSFKFRPNLLGTTLFYCSFVWT 89
           P+TTV I N +   +P+  HCKSKNDDLG   + +  ++SF+FRP++ G TLF+C F+W 
Sbjct: 26  PRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGFIW- 85

Query: 90  GQHQIYWFNVFDHKRDAGL----CTTCTWIIHEYSMCLQNPKTADGKQIC 136
              +++WF+++   RD       C  C W I +   C  N K ++   +C
Sbjct: 86  -DKELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLN-KNSNMFDVC 132

[Close]

BLAST of Clc04G01310 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 86.7 bits (213), Expect = 3.3e-17
Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 0


Query: 34  VTIVNQIEYGIPITVHCKSKNDDLGLHVLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQ 93
           V I N++  G+ + +HCKS +DDLGL +L    S+SFKFR +++GTTLFYC F W GQ +
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 94  IYWFNVFDHKRDAG----LCTTCTWIIHEYSMCLQNPKTADGKQICYNY 139
              F+++D  RD       C  C W I     C+ + ++     ICY++
Sbjct: 99  --RFDIYDDDRDGVRSHISCINCIWDISIQGPCMFS-ESDHAFNICYDW 144

[Close]

BLAST of Clc04G01310 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 84.0 bits (206), Expect = 2.1e-16
Identity = 48/132 (36.36%), Postives = 66/132 (50.00%), Query Frame = 0


Query: 1   MGSSPTLALSLLILFFTSLHAIQGAFLIPPKTTVTIVNQIEYGIPITVHCKSKNDDLGLH 60
           MGS  T  L  +++ F S      A +    T+V I N +  G+P+  HCKS+ DDLG  
Sbjct: 1   MGSLETCLLFFVMVMFMS------AIMSRASTSVVIYNDLGGGLPLRHHCKSREDDLGYQ 60

Query: 61  VLPLGQSYSFKFRPNLLGTTLFYCSFVWTGQHQIYWFNVFDHKRDAGL----CTTCTWII 120
            L  G+S+SF F P++ G TLFYC F W  +  I  F+++   RD       C  C W I
Sbjct: 61  SLAPGRSWSFGFTPDIFGRTLFYCRFSWGAESHI--FDIYKQSRDKEFQEFGCKKCEWKI 120

Query: 121 HEYSMCLQNPKT 129
            +   C    KT
Sbjct: 121 RKNGPCKFYKKT 124

The following BLAST results are available for this feature:

BLAST of Clc04G01310 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN55015.2	1.0e-65	82.31	hypothetical protein Csa_011982, partial [Cucumis sativus]	[more]
KAA0045871.1	1.0e-65	81.33	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KGN55010.2	3.0e-65	81.63	hypothetical protein Csa_012448 [Cucumis sativus]	[more]
TYK08032.1	3.9e-65	80.82	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
KAA0063208.1	3.9e-65	81.51	self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK13715.1 self-incom...	[more]

BLAST of Clc04G01310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23020	1.4e-20	43.36	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
F4JZG1	2.6e-19	42.02	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]
P0DN93	5.4e-17	37.40	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
Q9FMQ4	4.6e-16	39.45	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
F4JLQ5	8.9e-12	36.04	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]

BLAST of Clc04G01310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TWM4	5.0e-66	81.33	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3CQ97	1.9e-65	81.51	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]
A0A5D3C9Q3	1.9e-65	80.82	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00...	[more]
A0A5D3CTD8	1.9e-65	80.82	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]
A0A5D3CQA2	1.9e-65	81.51	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G0...	[more]

BLAST of Clc04G01310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04645.1	9.8e-22	43.36	Plant self-incompatibility protein S1 family	[more]
AT5G12070.1	1.8e-20	42.02	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	2.3e-18	37.27	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	3.3e-17	39.45	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	2.1e-16	36.36	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 33..137 e-value: 4.6E-26 score: 91.4 coord: 162..265 e-value: 3.7E-24 score: 85.3
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 8..127 coord: 150..255
None	No IPR available	PANTHER	PTHR31232:SF76	S-PROTEIN HOMOLOG 2	coord: 150..255
None	No IPR available	PANTHER	PTHR31232:SF76	S-PROTEIN HOMOLOG 2	coord: 8..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Clc04G01310.2	Clc04G01310.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen