Clc03G08260 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTTGTCTGTTGTCTGGCCAAGTTACTGAAGTTTCTGTATCCATGTTGTCATATCTTCCAATTCTTCGCTACATTTATTTTACAAAATCTATTCCTTTACTCCCTCTTTACCAGTGTACGAGCCACCATTGTAAAGATACAAACATGGCCGAAGAAAATAACTCAAGTTCAGAATCTTTCTCAAATTCTCAAGTTATGTATCGTTGTAAGAAGTGTCGTAGAATTGTTGCCACACATGAGAGTATAGTCACCCATGAAAGAGGAAAAGGTGAATCATGCTTCAAGTGGAGTAAGAGAAGTGGTAATTCACGAGGAATAGAGAACAAGCCGGCTGATTGCACCTCCATATTTGTCGAACCAATGAAATGGATGGAAACCTGTAAGATTAAGCAAATCAAATCCCAGTTTTCTCTTCTTCGTTTGTTTCAATTATCTTGCTCGCTCCTCGTAGAAATCAACTCATTCTTTCTTTTTGATTGACCAGTGCAAGATGGCCATGTTGAAGAGAAACTTGTGTGTATTGGATGCAAAGCTCGTTTGGGTTCCTTCAACTGGGCTGGCATGCAGTGCAGCTGTGGAGCTTGGGTTAATCCTGCTTTTCAACTTCACAAAAGCAGATTAGATGAATGCCTTATGTGAATAAACTAGAAAGATAATATACTTGCTAGTTGCTAAAGGTCTTCTATGGCTTCATGCTTCTTTTCTTTTCCTAGAACTAGGAACCTAGCAAACTTGATTTAGCAGAGTATTGAAAAGTTCAACTTTGGTAATTCCAAACTATAAACCAAAGTTTGAATTGTGGAACACTGAATACTGGTTATGCGAAAGGAATTTTTGAGTCCAAGATCTTTTGAATGAGAATTAACATGGATGCAGCAATTTTGGATTAACAGGACCAACTGAATTGCTGGAAGCCTTAGCTCTAAACTATGGGGTTCAATTAAGCATCCTATTTGGGAATTTATCTAGTACCAGCCAAGGACTTTCCAAAGTTTGGAACATGTTACATGAAAAAATTGTTTAAAAGACTGAAGTTCCACCAATCATTCAGATACCAGCAAAGAAACCAAGTCACTGGTTTTGATCTTATTCTTAGAATTGGAAGCAAAACGGTGCATGCTCTTACTCAACATGCCTAGGGGATAAAGGCCATTCTGAAGTTTGGATTGAAGACAATGAAGAGTATACCCCATGGGAGATTATTCTTCCTGTTTACACTTGCTCTTAAAAAAATTTGTTGGGCTAATGTATATTTCAAGTATTGGAACCAATCAATGATGAAGGGTGTAACATATTGATAATGTATTTCCCCACACTCTCTCTTCTAAAGATTAGTATCATTGGACATATGGATGATGTTGGGGGA ATGCTTTGTCTGTTGTCTGGCCAAGTTACTGAAGTTTCTGTATCCATGTTGTCATATCTTCCAATTCTTCGCTACATTTATTTTACAAAATCTATTCCTTTACTCCCTCTTTACCAGTGTACGAGCCACCATTGTAAAGATACAAACATGGCCGAAGAAAATAACTCAAGTTCAGAATCTTTCTCAAATTCTCAAGTTATGTATCGTTGTAAGAAGTGTCGTAGAATTGTTGCCACACATGAGAGTATAGTCACCCATGAAAGAGGAAAAGGTGAATCATGCTTCAAGTGGAGTAAGAGAAGTGGTAATTCACGAGGAATAGAGAACAAGCCGGCTGATTGCACCTCCATATTTGTCGAACCAATGAAATGGATGGAAACCTTGCAAGATGGCCATGTTGAAGAGAAACTTGTGTGTATTGGATGCAAAGCTCGTTTGGGTTCCTTCAACTGGGCTGGCATGCAGTGCAGCTGTGGAGCTTGGGTTAATCCTGCTTTTCAACTTCACAAAAGCAGATTAGATGAATGCCTTATGTGAATAAACTAGAAAGATAATATACTTGCTAGTTGCTAAAGGTCTTCTATGGCTTCATGCTTCTTTTCTTTTCCTAGAACTAGGAACCTAGCAAACTTGATTTAGCAGAGTATTGAAAAGTTCAACTTTGGTAATTCCAAACTATAAACCAAAGTTTGAATTGTGGAACACTGAATACTGGTTATGCGAAAGGAATTTTTGAGTCCAAGATCTTTTGAATGAGAATTAACATGGATGCAGCAATTTTGGATTAACAGGACCAACTGAATTGCTGGAAGCCTTAGCTCTAAACTATGGGGTTCAATTAAGCATCCTATTTGGGAATTTATCTAGTACCAGCCAAGGACTTTCCAAAGTTTGGAACATGTTACATGAAAAAATTGTTTAAAAGACTGAAGTTCCACCAATCATTCAGATACCAGCAAAGAAACCAAGTCACTGGTTTTGATCTTATTCTTAGAATTGGAAGCAAAACGGTGCATGCTCTTACTCAACATGCCTAGGGGATAAAGGCCATTCTGAAGTTTGGATTGAAGACAATGAAGAGTATACCCCATGGGAGATTATTCTTCCTGTTTACACTTGCTCTTAAAAAAATTTGTTGGGCTAATGTATATTTCAAGTATTGGAACCAATCAATGATGAAGGGTGTAACATATTGATAATGTATTTCCCCACACTCTCTCTTCTAAAGATTAGTATCATTGGACATATGGATGATGTTGGGGGA ATGCTTTGTCTGTTGTCTGGCCAAGTTACTGAAGTTTCTGTATCCATGTTGTCATATCTTCCAATTCTTCGCTACATTTATTTTACAAAATCTATTCCTTTACTCCCTCTTTACCAGTGTACGAGCCACCATTGTAAAGATACAAACATGGCCGAAGAAAATAACTCAAGTTCAGAATCTTTCTCAAATTCTCAAGTTATGTATCGTTGTAAGAAGTGTCGTAGAATTGTTGCCACACATGAGAGTATAGTCACCCATGAAAGAGGAAAAGGTGAATCATGCTTCAAGTGGAGTAAGAGAAGTGGTAATTCACGAGGAATAGAGAACAAGCCGGCTGATTGCACCTCCATATTTGTCGAACCAATGAAATGGATGGAAACCTTGCAAGATGGCCATGTTGAAGAGAAACTTGTGTGTATTGGATGCAAAGCTCGTTTGGGTTCCTTCAACTGGGCTGGCATGCAGTGCAGCTGTGGAGCTTGGGTTAATCCTGCTTTTCAACTTCACAAAAGCAGATTAGATGAATGCCTTATGTGA MLCLLSGQVTEVSVSMLSYLPILRYIYFTKSIPLLPLYQCTSHHCKDTNMAEENNSSSESFSNSQVMYRCKKCRRIVATHESIVTHERGKGESCFKWSKRSGNSRGIENKPADCTSIFVEPMKWMETLQDGHVEEKLVCIGCKARLGSFNWAGMQCSCGAWVNPAFQLHKSRLDECLM Homology
BLAST of Clc03G08260 vs. NCBI nr
Match: XP_038893904.1 (probable inactive dual specificity protein phosphatase-like At4g18593 [Benincasa hispida]) HSP 1 Score: 281.6 bits (719), Expect = 4.8e-72 Identity = 128/137 (93.43%), Postives = 134/137 (97.81%), Query Frame = 0
BLAST of Clc03G08260 vs. NCBI nr
Match: XP_011657797.1 (probable inactive dual specificity protein phosphatase-like At4g18593 [Cucumis sativus]) HSP 1 Score: 265.4 bits (677), Expect = 3.6e-67 Identity = 121/129 (93.80%), Postives = 125/129 (96.90%), Query Frame = 0
BLAST of Clc03G08260 vs. NCBI nr
Match: XP_008443127.1 (PREDICTED: probable inactive dual specificity protein phosphatase-like At4g18593 [Cucumis melo] >KAA0057032.1 putative inactive dual specificity protein phosphatase-like [Cucumis melo var. makuwa]) HSP 1 Score: 263.5 bits (672), Expect = 1.4e-66 Identity = 122/129 (94.57%), Postives = 124/129 (96.12%), Query Frame = 0
BLAST of Clc03G08260 vs. NCBI nr
Match: XP_022139849.1 (probable inactive dual specificity protein phosphatase-like At4g18593 [Momordica charantia]) HSP 1 Score: 255.4 bits (651), Expect = 3.7e-64 Identity = 118/129 (91.47%), Postives = 121/129 (93.80%), Query Frame = 0
BLAST of Clc03G08260 vs. NCBI nr
Match: XP_023542086.1 (probable inactive dual specificity protein phosphatase-like At4g18593 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 252.7 bits (644), Expect = 2.4e-63 Identity = 119/129 (92.25%), Postives = 121/129 (93.80%), Query Frame = 0
BLAST of Clc03G08260 vs. ExPASy Swiss-Prot
Match: Q570P7 (Probable inactive dual specificity protein phosphatase-like At4g18593 OS=Arabidopsis thaliana OX=3702 GN=At4g18593 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 5.0e-48 Identity = 87/125 (69.60%), Postives = 98/125 (78.40%), Query Frame = 0
BLAST of Clc03G08260 vs. ExPASy Swiss-Prot
Match: Q9D0T2 (Dual specificity protein phosphatase 12 OS=Mus musculus OX=10090 GN=Dusp12 PE=2 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 7.6e-28 Identity = 52/113 (46.02%), Postives = 74/113 (65.49%), Query Frame = 0
BLAST of Clc03G08260 vs. ExPASy Swiss-Prot
Match: Q9UNI6 (Dual specificity protein phosphatase 12 OS=Homo sapiens OX=9606 GN=DUSP12 PE=1 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.7e-27 Identity = 51/111 (45.95%), Postives = 74/111 (66.67%), Query Frame = 0
BLAST of Clc03G08260 vs. ExPASy Swiss-Prot
Match: Q9JIM4 (Dual specificity protein phosphatase 12 OS=Rattus norvegicus OX=10116 GN=Dusp12 PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.4e-26 Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = 0
BLAST of Clc03G08260 vs. ExPASy Swiss-Prot
Match: Q54T76 (Probable dual specificity protein phosphatase DDB_G0281963 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0281963 PE=3 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 9.9e-20 Identity = 49/138 (35.51%), Postives = 79/138 (57.25%), Query Frame = 0
BLAST of Clc03G08260 vs. ExPASy TrEMBL
Match: A0A5A7UMF2 (Putative inactive dual specificity protein phosphatase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002180 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 6.6e-67 Identity = 122/129 (94.57%), Postives = 124/129 (96.12%), Query Frame = 0
BLAST of Clc03G08260 vs. ExPASy TrEMBL
Match: A0A1S3B7A6 (probable inactive dual specificity protein phosphatase-like At4g18593 OS=Cucumis melo OX=3656 GN=LOC103486809 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 6.6e-67 Identity = 122/129 (94.57%), Postives = 124/129 (96.12%), Query Frame = 0
BLAST of Clc03G08260 vs. ExPASy TrEMBL
Match: A0A6J1CE42 (probable inactive dual specificity protein phosphatase-like At4g18593 OS=Momordica charantia OX=3673 GN=LOC111010661 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 1.8e-64 Identity = 118/129 (91.47%), Postives = 121/129 (93.80%), Query Frame = 0
BLAST of Clc03G08260 vs. ExPASy TrEMBL
Match: A0A6J1GSH2 (probable inactive dual specificity protein phosphatase-like At4g18593 OS=Cucurbita moschata OX=3662 GN=LOC111457110 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 2.6e-63 Identity = 118/129 (91.47%), Postives = 121/129 (93.80%), Query Frame = 0
BLAST of Clc03G08260 vs. ExPASy TrEMBL
Match: A0A6J1JVZ8 (probable inactive dual specificity protein phosphatase-like At4g18593 OS=Cucurbita maxima OX=3661 GN=LOC111490198 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 1.4e-61 Identity = 117/129 (90.70%), Postives = 119/129 (92.25%), Query Frame = 0
BLAST of Clc03G08260 vs. TAIR 10
Match: AT4G18593.1 (dual specificity protein phosphatase-related ) HSP 1 Score: 192.2 bits (487), Expect = 3.6e-49 Identity = 87/125 (69.60%), Postives = 98/125 (78.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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