Clc03G07500 (gene) Watermelon (cordophanus) v2

Overview
NameClc03G07500
Typegene
OrganismCitrullus lanatus subsp. cordophanus cv. cordophanus (Watermelon (cordophanus) v2)
Descriptioncold-regulated 413 inner membrane protein 1, chloroplastic-like
LocationClcChr03: 7747178 .. 7749388 (-)
RNA-Seq ExpressionClc03G07500
SyntenyClc03G07500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAATAATAATGTTGGGAGGTTTGATGAGTACTTTCGTCTCGGTTTTGGAGAGAGCAGCCGGCTCCGGTTTTTTCACGTTCATCGGTTGGGCGAGCGACAGTTTTGCTTGTTGAATCAAAACTAGAAAATCAAGAGCATCGTTTCCAAATTCCAGTCCAAATCCGAGAGAAGCTGATCTAGGCAAAGGAAGAAGGGGGAAATGGTTTGTGTATCTTTATCTTCTGCTGTTTCACTCTACAGTCCATCTCTCTACAAATCCAATCTCTCCGTTCCTCTCTCTCTAAGATCTTCACCGCCGAATGCTAAGCTCTCCTTCAGTCCTGCCGCTAAACGGAGTTCCATCTGTTATAATCCCCTCAGGTAATTTCAGGCTCTGGAATCATGCTAGATTGATTGAGTAATAGCGGTTTTGGTTTAATAAAATCGAGAGGTTTAAAAAGAAAAGTTGTTTGATCAGGTTTGCTGTCGGTAGCGAGGGGATTGCGACGGCGGGGATTAACAAGAAGAGGAGCCGTGGTTTAAGTGCTGTTTGTTACGCTATGCCTCTTAGCGCTCGCACTCTTCAGTGGATCTCCACCATTTCTTCTGTGTAATTCTCCCTTCTCTCTATCAGATTCTTGTGTAATTGCATACAAGTGCTTTAAGCGAGGATCTGGGAAACAAGCACCATCACGTCTAATATATAATCTTATTATATTTTCCGAACTTTGCTTTAAATTATCGTTGTTTTGCTCTCTCAACTATATGGAATTTACTACTTTCAATCTTCGAGGTATGTTTCTGTGGAATCAGCACATAATGCTCAATTTTAACCAATACTCAGATGGGTTTTTAAATGCTTTGCTACAATTAATTTGATTCCGGTAGATAATTAATTACGTTTAAGTCGACGGCATTAAGTGCCTACTTTTACAGTGTCAATATGTCACCATTTTCACCTTTATCTGCTGTTTCAGAGTCCATTGCACGTATCAAAGTATGTTTCAAAACACTAGGCTTCTTCTACAGGGTTTTAATGCTCGCAAGGGGGACTGGGATTCAGAAGTCATTTATTGTTCCGCTATTTGCTCTTCAGGCACCTGCAAGTGTTATCTCCTGGATGAAGTAAGTCTCGTGAAAGTTCTCTATATATTACTACCCCTTTTCTCCCTACGACTCATAGATGCGTTGATTATCTTCAAGAAAATAAGTTTAATTTTGTCCTTCTGGAACCAATTTTGCTATATGCTGATTGCTTCTCTCTATCAGTATCTATCAGCAGGATGCCAAGATCTATATGAGCAATTAGTTCCAATTTCTAAATGAGTTAATGTTTTGGTTCTAACTTCTATTTCAGAGGAGAATATGGCATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTCATCCCTGGTATAATCTTCTGGCTCCTGATTTTCCTCACTGGATTATCAAATGAATTTAATTGCTGGTTGTCATTCAATTTATCTAGTAAGGGACTTAGTTTATAGCTTATCTAGAGACGTAATAGTTTGAACCTCATTTTATTCAAGTAACTAAAAGGGTTCCACTTTGTACAATCCAATGAATGAATAGAATATTCATAGGAAGTCGGATGCTGGGTTCTTTTTGGATGTAGGTGAATTGGAGATACCGTTCATATCATTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGGTAAACATTTAAACTTTAATCAGTTTTAACATTTTCTTTCTTTCTCATCTCAGCATTTGGTTATTATCTGTCGCTTGCAGGGGAACTCAAGAAGGGAGCATTATCTCCCTACTGATTGCAGCATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGCAGCTTTCAGAGAGCTTTTGACCAGAATTCGATTCTTGCAACAGTAGCAGTCATTTGTGTTACTGCTGTCTCATTCCTGCTTGTAATCTGAGTTCCATAGTCACTCCCAAGTAAACCTTATCAGTTAAATCTTCAATTGATACTATTGGTCCTCCTGTAATAGTTACACAATAGTCAGAATGTACAGACCTTTCCCTTTTCTGTTTATAAATGCTATAAAGAAATTTTCCTTTATTCTTGCTTGCTTGATATCAATCATCCTCCTCCCTCTCTTTTTAGATATCACAAAATTGCATTGGATTGAACCTAGACAATTATTTGTTTCCTTTTTCAATAGCATTGGTCCTACTAGTTATAT

mRNA sequence

ATAATAATAATGTTGGGAGGTTTGATGAGTACTTTCGTCTCGGTTTTGGAGAGAGCAGCCGGCTCCGGTTTTTTCACGTTCATCGGTTGGGCGAGCGACAGTTTTGCTTGTTGAATCAAAACTAGAAAATCAAGAGCATCGTTTCCAAATTCCAGTCCAAATCCGAGAGAAGCTGATCTAGGCAAAGGAAGAAGGGGGAAATGGTTTGTGTATCTTTATCTTCTGCTGTTTCACTCTACAGTCCATCTCTCTACAAATCCAATCTCTCCGTTCCTCTCTCTCTAAGATCTTCACCGCCGAATGCTAAGCTCTCCTTCAGTCCTGCCGCTAAACGGAGTTCCATCTGTTATAATCCCCTCAGGTTTGCTGTCGGTAGCGAGGGGATTGCGACGGCGGGGATTAACAAGAAGAGGAGCCGTGGTTTAAGTGCTGTTTGTTACGCTATGCCTCTTAGCGCTCGCACTCTTCAGTGGATCTCCACCATTTCTTCTGTTGTCAATATGTCACCATTTTCACCTTTATCTGCTGTTTCAGAGTCCATTGCACGTATCAAAGTATGTTTCAAAACACTAGGCTTCTTCTACAGGGTTTTAATGCTCGCAAGGGGGACTGGGATTCAGAAGTCATTTATTGTTCCGCTATTTGCTCTTCAGGCACCTGCAAGTGTTATCTCCTGGATGAAAGGAGAATATGGCATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTCATCCCTGGTATAATCTTCTGGCTCCTGATTTTCCTCACTGGATTATCAAATGAATTTAATTGCTGGTTGTCATTCAATTTATCTAGTGAATTGGAGATACCGTTCATATCATTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGGGGAACTCAAGAAGGGAGCATTATCTCCCTACTGATTGCAGCATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGCAGCTTTCAGAGAGCTTTTGACCAGAATTCGATTCTTGCAACAGTAGCAGTCATTTGTGTTACTGCTGTCTCATTCCTGCTTGTAATCTGAGTTCCATAGTCACTCCCAAGTAAACCTTATCAGTTAAATCTTCAATTGATACTATTGGTCCTCCTGTAATAGTTACACAATAGTCAGAATGTACAGACCTTTCCCTTTTCTGTTTATAAATGCTATAAAGAAATTTTCCTTTATTCTTGCTTGCTTGATATCAATCATCCTCCTCCCTCTCTTTTTAGATATCACAAAATTGCATTGGATTGAACCTAGACAATTATTTGTTTCCTTTTTCAATAGCATTGGTCCTACTAGTTATAT

Coding sequence (CDS)

ATGGTTTGTGTATCTTTATCTTCTGCTGTTTCACTCTACAGTCCATCTCTCTACAAATCCAATCTCTCCGTTCCTCTCTCTCTAAGATCTTCACCGCCGAATGCTAAGCTCTCCTTCAGTCCTGCCGCTAAACGGAGTTCCATCTGTTATAATCCCCTCAGGTTTGCTGTCGGTAGCGAGGGGATTGCGACGGCGGGGATTAACAAGAAGAGGAGCCGTGGTTTAAGTGCTGTTTGTTACGCTATGCCTCTTAGCGCTCGCACTCTTCAGTGGATCTCCACCATTTCTTCTGTTGTCAATATGTCACCATTTTCACCTTTATCTGCTGTTTCAGAGTCCATTGCACGTATCAAAGTATGTTTCAAAACACTAGGCTTCTTCTACAGGGTTTTAATGCTCGCAAGGGGGACTGGGATTCAGAAGTCATTTATTGTTCCGCTATTTGCTCTTCAGGCACCTGCAAGTGTTATCTCCTGGATGAAAGGAGAATATGGCATTTGGAGCGCTTTTCTGGCACTTCTTGTTCGACTGTTCTTCTTCATCCCTGGTATAATCTTCTGGCTCCTGATTTTCCTCACTGGATTATCAAATGAATTTAATTGCTGGTTGTCATTCAATTTATCTAGTGAATTGGAGATACCGTTCATATCATTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGGGGAACTCAAGAAGGGAGCATTATCTCCCTACTGATTGCAGCATATTTGGCCTTCCAGCATTTCTCTCGAGCAGGCAGCTTTCAGAGAGCTTTTGACCAGAATTCGATTCTTGCAACAGTAGCAGTCATTTGTGTTACTGCTGTCTCATTCCTGCTTGTAATCTGA

Protein sequence

MVCVSLSSAVSLYSPSLYKSNLSVPLSLRSSPPNAKLSFSPAAKRSSICYNPLRFAVGSEGIATAGINKKRSRGLSAVCYAMPLSARTLQWISTISSVVNMSPFSPLSAVSESIARIKVCFKTLGFFYRVLMLARGTGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFFFIPGIIFWLLIFLTGLSNEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQNLRGTQEGSIISLLIAAYLAFQHFSRAGSFQRAFDQNSILATVAVICVTAVSFLLVI
Homology
BLAST of Clc03G07500 vs. NCBI nr
Match: XP_038896035.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 363.2 bits (931), Expect = 2.0e-96
Identity = 209/286 (73.08%), Postives = 223/286 (77.97%), Query Frame = 0

Query: 1   MVCVSLSSAVSLYSPSLYKSNLSVPLSLRSSPPNAKLSFSPAAKRSSICYNPLRFAVGSE 60
           MVCVSLSSAVSLY+PSLY+S LSVPLSLRSSPPNAKLSFSPAAK+SSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYNPSLYRSKLSVPLSLRSSPPNAKLSFSPAAKQSSICYNPLRFAVGSE 60

Query: 61  GIATAGINKKRSRGLSAVCYAMPLSARTLQWISTISSVVNMSPFSPLSAVSESIARIKVC 120
           GIATA I KKRSRGLSA+CYAMP++ARTLQWISTISS                       
Sbjct: 61  GIATAAITKKRSRGLSAICYAMPVNARTLQWISTISSA---------------------- 120

Query: 121 FKTLGFFYRVLMLARGTGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFFF 180
                    VLMLA+GTGIQKSFIVPLFAL APASV+SW+KGEYGIWSAFLALLVRLFFF
Sbjct: 121 ---------VLMLAKGTGIQKSFIVPLFALLAPASVVSWIKGEYGIWSAFLALLVRLFFF 180

Query: 181 IPGIIFWLLIFLTGLSNEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQNLRGTQEGSII 240
           IPG                          ELEIPFISLLLVIVAPYQVQ+LRGTQEG+II
Sbjct: 181 IPG--------------------------ELEIPFISLLLVIVAPYQVQSLRGTQEGNII 229

Query: 241 SLLIAAYLAFQHFSRAGSFQRAFDQNSILATVAVICVTAVSFLLVI 287
           SL+IAAYLAFQHFSRAGSF+RAFDQNSI+ATVAVIC TAVSFLLVI
Sbjct: 241 SLMIAAYLAFQHFSRAGSFRRAFDQNSIVATVAVICFTAVSFLLVI 229

BLAST of Clc03G07500 vs. NCBI nr
Match: XP_008443932.1 (PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucumis melo] >KAA0057095.1 cold-regulated 413 inner membrane protein 2 [Cucumis melo var. makuwa] >TYK20630.1 cold-regulated 413 inner membrane protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 362.8 bits (930), Expect = 2.6e-96
Identity = 209/286 (73.08%), Postives = 220/286 (76.92%), Query Frame = 0

Query: 1   MVCVSLSSAVSLYSPSLYKSNLSVPLSLRSSPPNAKLSFSPAAKRSSICYNPLRFAVGSE 60
           MVCVSLSSAVSLY PS YKS LSVPLSLRSSPPNAKLS + AAK+SSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GIATAGINKKRSRGLSAVCYAMPLSARTLQWISTISSVVNMSPFSPLSAVSESIARIKVC 120
           GIATAGINKK++RGLSA CYAMP++ RTLQW+STISSV                      
Sbjct: 61  GIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSV---------------------- 120

Query: 121 FKTLGFFYRVLMLARGTGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFFF 180
                    VLMLA+GTGIQKSFIVPLFALQAPASVISW+KGEYGIWSAFLALLVRLFFF
Sbjct: 121 ---------VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFF 180

Query: 181 IPGIIFWLLIFLTGLSNEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQNLRGTQEGSII 240
           IPG                          ELEIPFISLLLVIVAPYQVQNLRGTQEG II
Sbjct: 181 IPG--------------------------ELEIPFISLLLVIVAPYQVQNLRGTQEGCII 229

Query: 241 SLLIAAYLAFQHFSRAGSFQRAFDQNSILATVAVICVTAVSFLLVI 287
           SLLIAAYLAFQHFSRAGSFQRAFDQNSI+ATVAVIC+TAVSFL VI
Sbjct: 241 SLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVICITAVSFLFVI 229

BLAST of Clc03G07500 vs. NCBI nr
Match: XP_004147401.1 (cold-regulated 413 inner membrane protein 2, chloroplastic [Cucumis sativus] >KGN65572.1 hypothetical protein Csa_019760 [Cucumis sativus])

HSP 1 Score: 350.5 bits (898), Expect = 1.4e-92
Identity = 206/286 (72.03%), Postives = 216/286 (75.52%), Query Frame = 0

Query: 1   MVCVSLSSAVSLYSPSLYKSNLSVPLSLRSSPPNAKLSFSPAAKRSSICYNPLRFAVGSE 60
           MVCVSLSSAVSLY PS YKS LSVPLSLRSSPPNAKLS + AAK+SSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GIATAGINKKRSRGLSAVCYAMPLSARTLQWISTISSVVNMSPFSPLSAVSESIARIKVC 120
                GINKK+SRGLSAVCYAMP++ RTLQWISTISSV                      
Sbjct: 61  -----GINKKKSRGLSAVCYAMPVNTRTLQWISTISSV---------------------- 120

Query: 121 FKTLGFFYRVLMLARGTGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFFF 180
                    VLMLA+GTGIQKSFIVPLFALQAPASVISW+KGEYGIWSAFLALLVRLFFF
Sbjct: 121 ---------VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFF 180

Query: 181 IPGIIFWLLIFLTGLSNEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQNLRGTQEGSII 240
           IPG                          ELEIPFISLLLVIVAPYQVQNLRGTQEG II
Sbjct: 181 IPG--------------------------ELEIPFISLLLVIVAPYQVQNLRGTQEGCII 224

Query: 241 SLLIAAYLAFQHFSRAGSFQRAFDQNSILATVAVICVTAVSFLLVI 287
           SLLIAAYLAFQHFSRAGSFQRAFDQNSI+ATVAV+C+TAVSFL VI
Sbjct: 241 SLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224

BLAST of Clc03G07500 vs. NCBI nr
Match: XP_022140053.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 342.8 bits (878), Expect = 2.8e-90
Identity = 198/286 (69.23%), Postives = 215/286 (75.17%), Query Frame = 0

Query: 1   MVCVSLSSAVSLYSPSLYKSNLSVPLSLRSSPPNAKLSFSPAAKRSSICYNPLRFAVGSE 60
           MVC+SLSSA SL++ SLYK+ LS PLSLRS P +AKLS +PA KRSSICYNPLRFAVG+E
Sbjct: 1   MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNE 60

Query: 61  GIATAGINKKRSRGLSAVCYAMPLSARTLQWISTISSVVNMSPFSPLSAVSESIARIKVC 120
           GIATA INK+RSRGL+ VCYAMPL+AR +QWISTIS                        
Sbjct: 61  GIATAAINKRRSRGLTTVCYAMPLTARNIQWISTIS------------------------ 120

Query: 121 FKTLGFFYRVLMLARGTGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFFF 180
                  Y VLMLARGTGIQKSFIVPLFALQAPASVISW+KGEYGIW+AFLALLVRLFFF
Sbjct: 121 -------YVVLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFF 180

Query: 181 IPGIIFWLLIFLTGLSNEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQNLRGTQEGSII 240
           IPG                          ELEIPFISLLLVIVAPYQVQNLRGTQEGSII
Sbjct: 181 IPG--------------------------ELEIPFISLLLVIVAPYQVQNLRGTQEGSII 229

Query: 241 SLLIAAYLAFQHFSRAGSFQRAFDQNSILATVAVICVTAVSFLLVI 287
           SLLIAA+LAFQHFSRAGSF+RAFDQNSI+AT AV+CVTA SFLLVI
Sbjct: 241 SLLIAAFLAFQHFSRAGSFRRAFDQNSIVATAAVVCVTAASFLLVI 229

BLAST of Clc03G07500 vs. NCBI nr
Match: XP_022994881.1 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 338.6 bits (867), Expect = 5.3e-89
Identity = 200/286 (69.93%), Postives = 215/286 (75.17%), Query Frame = 0

Query: 1   MVCVSLSSAVSLYSPSLYKSNLSVPLSLRSSPPNAKLSFSPAAKRSSICYNPLRFAVGSE 60
           MVCV LSSA+SL+SP L+KS LS PLSLRSS PNAKL+F+PAAK+SSIC NP+RF  GS+
Sbjct: 1   MVCV-LSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSD 60

Query: 61  GIATAGINKKRSRGLSAVCYAMPLSARTLQWISTISSVVNMSPFSPLSAVSESIARIKVC 120
             +T  INKKR RGLSAVCYAMPLSAR LQWISTISSV                      
Sbjct: 61  VSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSV---------------------- 120

Query: 121 FKTLGFFYRVLMLARGTGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFFF 180
                    +LMLARGTGIQKSFIVPLFALQAPASVISW+KGEYGIWSAFLALLVRLFFF
Sbjct: 121 ---------ILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFF 180

Query: 181 IPGIIFWLLIFLTGLSNEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQNLRGTQEGSII 240
           IPG                          ELEIPFISLLLVIVAPYQVQNLRGTQEG+II
Sbjct: 181 IPG--------------------------ELEIPFISLLLVIVAPYQVQNLRGTQEGTII 228

Query: 241 SLLIAAYLAFQHFSRAGSFQRAFDQNSILATVAVICVTAVSFLLVI 287
           SLLIAAYLAFQHFSRAGSF+RAFDQNSI+ATVA+ICVTAVSFLLVI
Sbjct: 241 SLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSFLLVI 228

BLAST of Clc03G07500 vs. ExPASy Swiss-Prot
Match: F4I1G5 (Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM2 PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.7e-53
Identity = 138/288 (47.92%), Postives = 165/288 (57.29%), Query Frame = 0

Query: 2   VCVSLSSAVSLYSPSLYKSNLSVPLSLRSSPPNAKLSFSPAAKRSSICYNPLRFAVGSEG 61
           +C+S S  VSL+    +     + L LR  P N           S +C+NPLR +   + 
Sbjct: 4   LCLSSSRIVSLHHQKPF-----LALKLRPRPSNIS---GLGHSTSVVCFNPLRLSADRQR 63

Query: 62  IAT--AGINKKRSRGLSAVCYAMP-LSARTLQWISTISSVVNMSPFSPLSAVSESIARIK 121
            AT  A   K+R RG S VCYA P LS   LQWISTIS V                    
Sbjct: 64  TATVSARAEKRRKRGSSVVCYATPMLSVHNLQWISTISCV-------------------- 123

Query: 122 VCFKTLGFFYRVLMLARGTGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLF 181
                       LM ARGTGI KSF+VPLFALQAP  ++SWMKGEYGIW+AFLALL RLF
Sbjct: 124 -----------ALMFARGTGIHKSFVVPLFALQAPMGIVSWMKGEYGIWAAFLALLTRLF 183

Query: 182 FFIPGIIFWLLIFLTGLSNEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQNLRGTQEGS 241
           F  P                           ELE+PFI+LLLVIVAPYQV ++RG QEG+
Sbjct: 184 FSFP--------------------------VELELPFIALLLVIVAPYQVMSIRGKQEGA 226

Query: 242 IISLLIAAYLAFQHFSRAGSFQRAFDQNSILATVAVICVTAVSFLLVI 287
           I+SL I+ +LAFQHFSRAG+ Q+AFDQNS+LATVA+I VT VSFL +I
Sbjct: 244 ILSLAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 226

BLAST of Clc03G07500 vs. ExPASy Swiss-Prot
Match: Q94AL8 (Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM1 PE=1 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.2e-52
Identity = 129/287 (44.95%), Postives = 169/287 (58.89%), Query Frame = 0

Query: 2   VCVSLSSAVSLYSPSLYKSNLSVPLSLRSSPPNAKLSFSPAAKRSSICYNPLRFAVGSEG 61
           +C+S S  VSL+    + S     L LRS P +           S +C+NPLR +   + 
Sbjct: 4   LCLSSSRIVSLHHQKPFLS-----LKLRSRPSDLS---GLGRHTSPVCFNPLRLSGDRQR 63

Query: 62  IATAG--INKKRSRGLSAVCYAMPLSARTLQWISTISSVVNMSPFSPLSAVSESIARIKV 121
            AT    + K+R RG S VCYA P+SA +LQWISTIS +                     
Sbjct: 64  TATVSTRVEKRRKRGSSVVCYAAPISANSLQWISTISCL--------------------- 123

Query: 122 CFKTLGFFYRVLMLARGTGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFF 181
                      LMLARGTGI KS +VPLFAL AP+S+++W+KGEYG+W+AFLAL+ RLFF
Sbjct: 124 ----------ALMLARGTGIHKSVVVPLFALHAPSSIVAWIKGEYGVWAAFLALIARLFF 183

Query: 182 FIPGIIFWLLIFLTGLSNEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQNLRGTQEGSI 241
             PG                          ELE+PFI+LLLVIVAPYQV N+RG QEG+I
Sbjct: 184 TFPG--------------------------ELELPFIALLLVIVAPYQVMNIRGKQEGAI 225

Query: 242 ISLLIAAYLAFQHFSRAGSFQRAFDQNSILATVAVICVTAVSFLLVI 287
           I++ I+ +LAFQHFSRAGS ++A+++ S+LATVA+I VT VS LL++
Sbjct: 244 IAIAISGFLAFQHFSRAGSLEKAYEKGSVLATVAIIGVTVVSLLLLL 225

BLAST of Clc03G07500 vs. ExPASy Swiss-Prot
Match: Q9SVL6 (Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=COR413PM2 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.3e-09
Identity = 39/130 (30.00%), Postives = 66/130 (50.77%), Query Frame = 0

Query: 137 TGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFFFIPGIIFWLLIFLTGLS 196
           T +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF                 
Sbjct: 72  TKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFF----------------P 131

Query: 197 NEFNCWLSFNLSSELEIPFISLLLVIVAP-YQVQNLRGTQEGSIISLLIAAYLAFQHFSR 256
             F  W        LE+P   +LL++V+P +   ++RGT  G++ISL I  YL  +H   
Sbjct: 132 KHFPDW--------LEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRA 177

Query: 257 AGSFQRAFDQ 266
           +G F+ +F Q
Sbjct: 192 SGGFRNSFTQ 177

BLAST of Clc03G07500 vs. ExPASy Swiss-Prot
Match: O23164 (Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g37220 PE=2 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 7.4e-09
Identity = 42/143 (29.37%), Postives = 70/143 (48.95%), Query Frame = 0

Query: 137 TGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFFFIPGIIFWLLIFLTGLS 196
           T +  + +VP      P+ +  +  G++G W A +A++VRLFF                 
Sbjct: 71  TKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIVRLFF----------------P 130

Query: 197 NEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQ-NLRGTQEGSIISLLIAAYLAFQHFSR 256
            EF  W        LEIP   +L+V+V+P  +   LR +  G++I L+IA YL  +H   
Sbjct: 131 KEFPEW--------LEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKA 189

Query: 257 AGSFQRAFDQ-NSILATVAVICV 278
           +G F+ +F Q N I  T+ ++ +
Sbjct: 191 SGGFKNSFTQKNGISNTIGIVAL 189

BLAST of Clc03G07500 vs. ExPASy Swiss-Prot
Match: Q9XIM7 (Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=COR413PM1 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.9e-06
Identity = 41/143 (28.67%), Postives = 63/143 (44.06%), Query Frame = 0

Query: 137 TGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFFFIPGIIFWLLIFLTGLS 196
           T +  S ++P      P+ +    +GE G W AF+A++V+LFF                 
Sbjct: 69  TNMLTSLLIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFF----------------- 128

Query: 197 NEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQ-NLRGTQEGSIISLLIAAYLAFQHFSR 256
                    +    LE+P   +LL +VAP  +    R +  G  I L I  YL  +H   
Sbjct: 129 -------PKHAREYLELPVALVLLAVVAPNLIAGTFRDSWIGLAICLGIGCYLLQEHIRA 187

Query: 257 AGSFQRAFDQ-NSILATVAVICV 278
           +G F+ AF + N I  TV +IC+
Sbjct: 189 SGGFRNAFTKANGISNTVGIICL 187

BLAST of Clc03G07500 vs. ExPASy TrEMBL
Match: A0A5D3DB21 (Cold-regulated 413 inner membrane protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G00120 PE=3 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.3e-96
Identity = 209/286 (73.08%), Postives = 220/286 (76.92%), Query Frame = 0

Query: 1   MVCVSLSSAVSLYSPSLYKSNLSVPLSLRSSPPNAKLSFSPAAKRSSICYNPLRFAVGSE 60
           MVCVSLSSAVSLY PS YKS LSVPLSLRSSPPNAKLS + AAK+SSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GIATAGINKKRSRGLSAVCYAMPLSARTLQWISTISSVVNMSPFSPLSAVSESIARIKVC 120
           GIATAGINKK++RGLSA CYAMP++ RTLQW+STISSV                      
Sbjct: 61  GIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSV---------------------- 120

Query: 121 FKTLGFFYRVLMLARGTGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFFF 180
                    VLMLA+GTGIQKSFIVPLFALQAPASVISW+KGEYGIWSAFLALLVRLFFF
Sbjct: 121 ---------VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFF 180

Query: 181 IPGIIFWLLIFLTGLSNEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQNLRGTQEGSII 240
           IPG                          ELEIPFISLLLVIVAPYQVQNLRGTQEG II
Sbjct: 181 IPG--------------------------ELEIPFISLLLVIVAPYQVQNLRGTQEGCII 229

Query: 241 SLLIAAYLAFQHFSRAGSFQRAFDQNSILATVAVICVTAVSFLLVI 287
           SLLIAAYLAFQHFSRAGSFQRAFDQNSI+ATVAVIC+TAVSFL VI
Sbjct: 241 SLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVICITAVSFLFVI 229

BLAST of Clc03G07500 vs. ExPASy TrEMBL
Match: A0A1S3B961 (cold-regulated 413 inner membrane protein 2, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103487404 PE=3 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 1.3e-96
Identity = 209/286 (73.08%), Postives = 220/286 (76.92%), Query Frame = 0

Query: 1   MVCVSLSSAVSLYSPSLYKSNLSVPLSLRSSPPNAKLSFSPAAKRSSICYNPLRFAVGSE 60
           MVCVSLSSAVSLY PS YKS LSVPLSLRSSPPNAKLS + AAK+SSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYPPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GIATAGINKKRSRGLSAVCYAMPLSARTLQWISTISSVVNMSPFSPLSAVSESIARIKVC 120
           GIATAGINKK++RGLSA CYAMP++ RTLQW+STISSV                      
Sbjct: 61  GIATAGINKKKNRGLSAACYAMPVNTRTLQWVSTISSV---------------------- 120

Query: 121 FKTLGFFYRVLMLARGTGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFFF 180
                    VLMLA+GTGIQKSFIVPLFALQAPASVISW+KGEYGIWSAFLALLVRLFFF
Sbjct: 121 ---------VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFF 180

Query: 181 IPGIIFWLLIFLTGLSNEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQNLRGTQEGSII 240
           IPG                          ELEIPFISLLLVIVAPYQVQNLRGTQEG II
Sbjct: 181 IPG--------------------------ELEIPFISLLLVIVAPYQVQNLRGTQEGCII 229

Query: 241 SLLIAAYLAFQHFSRAGSFQRAFDQNSILATVAVICVTAVSFLLVI 287
           SLLIAAYLAFQHFSRAGSFQRAFDQNSI+ATVAVIC+TAVSFL VI
Sbjct: 241 SLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVICITAVSFLFVI 229

BLAST of Clc03G07500 vs. ExPASy TrEMBL
Match: A0A0A0LXM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G459500 PE=3 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 6.6e-93
Identity = 206/286 (72.03%), Postives = 216/286 (75.52%), Query Frame = 0

Query: 1   MVCVSLSSAVSLYSPSLYKSNLSVPLSLRSSPPNAKLSFSPAAKRSSICYNPLRFAVGSE 60
           MVCVSLSSAVSLY PS YKS LSVPLSLRSSPPNAKLS + AAK+SSICYNPLRFAVGSE
Sbjct: 1   MVCVSLSSAVSLYIPSFYKSKLSVPLSLRSSPPNAKLSLNSAAKQSSICYNPLRFAVGSE 60

Query: 61  GIATAGINKKRSRGLSAVCYAMPLSARTLQWISTISSVVNMSPFSPLSAVSESIARIKVC 120
                GINKK+SRGLSAVCYAMP++ RTLQWISTISSV                      
Sbjct: 61  -----GINKKKSRGLSAVCYAMPVNTRTLQWISTISSV---------------------- 120

Query: 121 FKTLGFFYRVLMLARGTGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFFF 180
                    VLMLA+GTGIQKSFIVPLFALQAPASVISW+KGEYGIWSAFLALLVRLFFF
Sbjct: 121 ---------VLMLAKGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFF 180

Query: 181 IPGIIFWLLIFLTGLSNEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQNLRGTQEGSII 240
           IPG                          ELEIPFISLLLVIVAPYQVQNLRGTQEG II
Sbjct: 181 IPG--------------------------ELEIPFISLLLVIVAPYQVQNLRGTQEGCII 224

Query: 241 SLLIAAYLAFQHFSRAGSFQRAFDQNSILATVAVICVTAVSFLLVI 287
           SLLIAAYLAFQHFSRAGSFQRAFDQNSI+ATVAV+C+TAVSFL VI
Sbjct: 241 SLLIAAYLAFQHFSRAGSFQRAFDQNSIVATVAVVCITAVSFLFVI 224

BLAST of Clc03G07500 vs. ExPASy TrEMBL
Match: A0A6J1CH44 (cold-regulated 413 inner membrane protein 1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111010803 PE=3 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 1.4e-90
Identity = 198/286 (69.23%), Postives = 215/286 (75.17%), Query Frame = 0

Query: 1   MVCVSLSSAVSLYSPSLYKSNLSVPLSLRSSPPNAKLSFSPAAKRSSICYNPLRFAVGSE 60
           MVC+SLSSA SL++ SLYK+ LS PLSLRS P +AKLS +PA KRSSICYNPLRFAVG+E
Sbjct: 1   MVCLSLSSATSLHTLSLYKTKLSAPLSLRSPPLHAKLSLNPAVKRSSICYNPLRFAVGNE 60

Query: 61  GIATAGINKKRSRGLSAVCYAMPLSARTLQWISTISSVVNMSPFSPLSAVSESIARIKVC 120
           GIATA INK+RSRGL+ VCYAMPL+AR +QWISTIS                        
Sbjct: 61  GIATAAINKRRSRGLTTVCYAMPLTARNIQWISTIS------------------------ 120

Query: 121 FKTLGFFYRVLMLARGTGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFFF 180
                  Y VLMLARGTGIQKSFIVPLFALQAPASVISW+KGEYGIW+AFLALLVRLFFF
Sbjct: 121 -------YVVLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWTAFLALLVRLFFF 180

Query: 181 IPGIIFWLLIFLTGLSNEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQNLRGTQEGSII 240
           IPG                          ELEIPFISLLLVIVAPYQVQNLRGTQEGSII
Sbjct: 181 IPG--------------------------ELEIPFISLLLVIVAPYQVQNLRGTQEGSII 229

Query: 241 SLLIAAYLAFQHFSRAGSFQRAFDQNSILATVAVICVTAVSFLLVI 287
           SLLIAA+LAFQHFSRAGSF+RAFDQNSI+AT AV+CVTA SFLLVI
Sbjct: 241 SLLIAAFLAFQHFSRAGSFRRAFDQNSIVATAAVVCVTAASFLLVI 229

BLAST of Clc03G07500 vs. ExPASy TrEMBL
Match: A0A6J1K0I6 (cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490472 PE=3 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 2.6e-89
Identity = 200/286 (69.93%), Postives = 215/286 (75.17%), Query Frame = 0

Query: 1   MVCVSLSSAVSLYSPSLYKSNLSVPLSLRSSPPNAKLSFSPAAKRSSICYNPLRFAVGSE 60
           MVCV LSSA+SL+SP L+KS LS PLSLRSS PNAKL+F+PAAK+SSIC NP+RF  GS+
Sbjct: 1   MVCV-LSSAISLHSPFLHKSKLSAPLSLRSSLPNAKLTFNPAAKQSSICSNPIRFGFGSD 60

Query: 61  GIATAGINKKRSRGLSAVCYAMPLSARTLQWISTISSVVNMSPFSPLSAVSESIARIKVC 120
             +T  INKKR RGLSAVCYAMPLSAR LQWISTISSV                      
Sbjct: 61  VSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSV---------------------- 120

Query: 121 FKTLGFFYRVLMLARGTGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFFF 180
                    +LMLARGTGIQKSFIVPLFALQAPASVISW+KGEYGIWSAFLALLVRLFFF
Sbjct: 121 ---------ILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFF 180

Query: 181 IPGIIFWLLIFLTGLSNEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQNLRGTQEGSII 240
           IPG                          ELEIPFISLLLVIVAPYQVQNLRGTQEG+II
Sbjct: 181 IPG--------------------------ELEIPFISLLLVIVAPYQVQNLRGTQEGTII 228

Query: 241 SLLIAAYLAFQHFSRAGSFQRAFDQNSILATVAVICVTAVSFLLVI 287
           SLLIAAYLAFQHFSRAGSF+RAFDQNSI+ATVA+ICVTAVSFLLVI
Sbjct: 241 SLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSFLLVI 228

BLAST of Clc03G07500 vs. TAIR 10
Match: AT1G29390.1 (cold regulated 314 thylakoid membrane 2 )

HSP 1 Score: 209.9 bits (533), Expect = 2.7e-54
Identity = 138/288 (47.92%), Postives = 165/288 (57.29%), Query Frame = 0

Query: 2   VCVSLSSAVSLYSPSLYKSNLSVPLSLRSSPPNAKLSFSPAAKRSSICYNPLRFAVGSEG 61
           +C+S S  VSL+    +     + L LR  P N           S +C+NPLR +   + 
Sbjct: 4   LCLSSSRIVSLHHQKPF-----LALKLRPRPSNIS---GLGHSTSVVCFNPLRLSADRQR 63

Query: 62  IAT--AGINKKRSRGLSAVCYAMP-LSARTLQWISTISSVVNMSPFSPLSAVSESIARIK 121
            AT  A   K+R RG S VCYA P LS   LQWISTIS V                    
Sbjct: 64  TATVSARAEKRRKRGSSVVCYATPMLSVHNLQWISTISCV-------------------- 123

Query: 122 VCFKTLGFFYRVLMLARGTGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLF 181
                       LM ARGTGI KSF+VPLFALQAP  ++SWMKGEYGIW+AFLALL RLF
Sbjct: 124 -----------ALMFARGTGIHKSFVVPLFALQAPMGIVSWMKGEYGIWAAFLALLTRLF 183

Query: 182 FFIPGIIFWLLIFLTGLSNEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQNLRGTQEGS 241
           F  P                           ELE+PFI+LLLVIVAPYQV ++RG QEG+
Sbjct: 184 FSFP--------------------------VELELPFIALLLVIVAPYQVMSIRGKQEGA 226

Query: 242 IISLLIAAYLAFQHFSRAGSFQRAFDQNSILATVAVICVTAVSFLLVI 287
           I+SL I+ +LAFQHFSRAG+ Q+AFDQNS+LATVA+I VT VSFL +I
Sbjct: 244 ILSLAISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 226

BLAST of Clc03G07500 vs. TAIR 10
Match: AT1G29395.1 (COLD REGULATED 314 INNER MEMBRANE 1 )

HSP 1 Score: 206.8 bits (525), Expect = 2.3e-53
Identity = 129/287 (44.95%), Postives = 169/287 (58.89%), Query Frame = 0

Query: 2   VCVSLSSAVSLYSPSLYKSNLSVPLSLRSSPPNAKLSFSPAAKRSSICYNPLRFAVGSEG 61
           +C+S S  VSL+    + S     L LRS P +           S +C+NPLR +   + 
Sbjct: 4   LCLSSSRIVSLHHQKPFLS-----LKLRSRPSDLS---GLGRHTSPVCFNPLRLSGDRQR 63

Query: 62  IATAG--INKKRSRGLSAVCYAMPLSARTLQWISTISSVVNMSPFSPLSAVSESIARIKV 121
            AT    + K+R RG S VCYA P+SA +LQWISTIS +                     
Sbjct: 64  TATVSTRVEKRRKRGSSVVCYAAPISANSLQWISTISCL--------------------- 123

Query: 122 CFKTLGFFYRVLMLARGTGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFF 181
                      LMLARGTGI KS +VPLFAL AP+S+++W+KGEYG+W+AFLAL+ RLFF
Sbjct: 124 ----------ALMLARGTGIHKSVVVPLFALHAPSSIVAWIKGEYGVWAAFLALIARLFF 183

Query: 182 FIPGIIFWLLIFLTGLSNEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQNLRGTQEGSI 241
             PG                          ELE+PFI+LLLVIVAPYQV N+RG QEG+I
Sbjct: 184 TFPG--------------------------ELELPFIALLLVIVAPYQVMNIRGKQEGAI 225

Query: 242 ISLLIAAYLAFQHFSRAGSFQRAFDQNSILATVAVICVTAVSFLLVI 287
           I++ I+ +LAFQHFSRAGS ++A+++ S+LATVA+I VT VS LL++
Sbjct: 244 IAIAISGFLAFQHFSRAGSLEKAYEKGSVLATVAIIGVTVVSLLLLL 225

BLAST of Clc03G07500 vs. TAIR 10
Match: AT1G29390.2 (cold regulated 314 thylakoid membrane 2 )

HSP 1 Score: 198.0 bits (502), Expect = 1.0e-50
Identity = 119/224 (53.12%), Postives = 138/224 (61.61%), Query Frame = 0

Query: 64  TAGINKKRSRGLSAVCYAMP-LSARTLQWISTISSVVNMSPFSPLSAVSESIARIKVCFK 123
           +A   K+R RG S VCYA P LS   LQWISTIS V                        
Sbjct: 17  SARAEKRRKRGSSVVCYATPMLSVHNLQWISTISCV------------------------ 76

Query: 124 TLGFFYRVLMLARGTGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFFFIP 183
                   LM ARGTGI KSF+VPLFALQAP  ++SWMKGEYGIW+AFLALL RLFF  P
Sbjct: 77  -------ALMFARGTGIHKSFVVPLFALQAPMGIVSWMKGEYGIWAAFLALLTRLFFSFP 136

Query: 184 GIIFWLLIFLTGLSNEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQNLRGTQEGSIISL 243
                                      ELE+PFI+LLLVIVAPYQV ++RG QEG+I+SL
Sbjct: 137 --------------------------VELELPFIALLLVIVAPYQVMSIRGKQEGAILSL 183

Query: 244 LIAAYLAFQHFSRAGSFQRAFDQNSILATVAVICVTAVSFLLVI 287
            I+ +LAFQHFSRAG+ Q+AFDQNS+LATVA+I VT VSFL +I
Sbjct: 197 AISCFLAFQHFSRAGTLQKAFDQNSVLATVAIIGVTVVSFLFLI 183

BLAST of Clc03G07500 vs. TAIR 10
Match: AT3G50830.1 (cold-regulated 413-plasma membrane 2 )

HSP 1 Score: 63.5 bits (153), Expect = 3.1e-10
Identity = 39/130 (30.00%), Postives = 66/130 (50.77%), Query Frame = 0

Query: 137 TGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFFFIPGIIFWLLIFLTGLS 196
           T +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF                 
Sbjct: 72  TKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFF----------------P 131

Query: 197 NEFNCWLSFNLSSELEIPFISLLLVIVAP-YQVQNLRGTQEGSIISLLIAAYLAFQHFSR 256
             F  W        LE+P   +LL++V+P +   ++RGT  G++ISL I  YL  +H   
Sbjct: 132 KHFPDW--------LEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRA 177

Query: 257 AGSFQRAFDQ 266
           +G F+ +F Q
Sbjct: 192 SGGFRNSFTQ 177

BLAST of Clc03G07500 vs. TAIR 10
Match: AT4G37220.1 (Cold acclimation protein WCOR413 family )

HSP 1 Score: 62.8 bits (151), Expect = 5.3e-10
Identity = 42/143 (29.37%), Postives = 70/143 (48.95%), Query Frame = 0

Query: 137 TGIQKSFIVPLFALQAPASVISWMKGEYGIWSAFLALLVRLFFFIPGIIFWLLIFLTGLS 196
           T +  + +VP      P+ +  +  G++G W A +A++VRLFF                 
Sbjct: 71  TKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIVRLFF----------------P 130

Query: 197 NEFNCWLSFNLSSELEIPFISLLLVIVAPYQVQ-NLRGTQEGSIISLLIAAYLAFQHFSR 256
            EF  W        LEIP   +L+V+V+P  +   LR +  G++I L+IA YL  +H   
Sbjct: 131 KEFPEW--------LEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKA 189

Query: 257 AGSFQRAFDQ-NSILATVAVICV 278
           +G F+ +F Q N I  T+ ++ +
Sbjct: 191 SGGFKNSFTQKNGISNTIGIVAL 189

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038896035.12.0e-9673.08cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispi... [more]
XP_008443932.12.6e-9673.08PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucu... [more]
XP_004147401.11.4e-9272.03cold-regulated 413 inner membrane protein 2, chloroplastic [Cucumis sativus] >KG... [more]
XP_022140053.12.8e-9069.23cold-regulated 413 inner membrane protein 1, chloroplastic-like [Momordica chara... [more]
XP_022994881.15.3e-8969.93cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucu... [more]
Match NameE-valueIdentityDescription
F4I1G53.7e-5347.92Cold-regulated 413 inner membrane protein 2, chloroplastic OS=Arabidopsis thalia... [more]
Q94AL83.2e-5244.95Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thalia... [more]
Q9SVL64.3e-0930.00Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=... [more]
O231647.4e-0929.37Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q9XIM75.9e-0628.67Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=... [more]
Match NameE-valueIdentityDescription
A0A5D3DB211.3e-9673.08Cold-regulated 413 inner membrane protein 2 OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B9611.3e-9673.08cold-regulated 413 inner membrane protein 2, chloroplastic-like OS=Cucumis melo ... [more]
A0A0A0LXM76.6e-9372.03Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G459500 PE=3 SV=1[more]
A0A6J1CH441.4e-9069.23cold-regulated 413 inner membrane protein 1, chloroplastic-like OS=Momordica cha... [more]
A0A6J1K0I62.6e-8969.93cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 OS=Cu... [more]
Match NameE-valueIdentityDescription
AT1G29390.12.7e-5447.92cold regulated 314 thylakoid membrane 2 [more]
AT1G29395.12.3e-5344.95COLD REGULATED 314 INNER MEMBRANE 1 [more]
AT1G29390.21.0e-5053.13cold regulated 314 thylakoid membrane 2 [more]
AT3G50830.13.1e-1030.00cold-regulated 413-plasma membrane 2 [more]
AT4G37220.15.3e-1029.37Cold acclimation protein WCOR413 family [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008892Cold-regulated 413 proteinPFAMPF05562WCOR413coord: 206..277
e-value: 2.0E-22
score: 80.0
coord: 130..183
e-value: 6.5E-15
score: 55.5
IPR008892Cold-regulated 413 proteinPANTHERPTHR33596COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2coord: 130..183
coord: 13..101
coord: 204..286
NoneNo IPR availablePANTHERPTHR33596:SF17COLD-REGULATED 413 INNER MEMBRANE PROTEIN 1, CHLOROPLASTIC-RELATEDcoord: 204..286
NoneNo IPR availablePANTHERPTHR33596:SF17COLD-REGULATED 413 INNER MEMBRANE PROTEIN 1, CHLOROPLASTIC-RELATEDcoord: 130..183
coord: 13..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Clc03G07500.2Clc03G07500.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane