Clc02G22580 (gene) Watermelon (cordophanus) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATAATATATCCGCTAGTGTTAGTGAACCTGTAGTAAGACTCATTCTTTTTGGCAACAAAGTTTAAGTACTATAACATGTTAACGAAAATTTCCTGTATATTGAGACATATTTAGGTGCATATTGAGTTGCATTATCTTGTTGTAGCCTACTCTAATCATACCAATTTTTTTAAAAAAAGAAATGGAAAAAGTAAGAGTTTATGATGTCACAAGTTGACTAGACAACTTAGTGGGTGTAAGTCATGCACCAAAAAAAATTTCTTATATATCTTATTTGAGGTTTGATAATATATGTTTGATACCAATTGAATTATATTCATTTTGACTTCTTTATTCAATTGTCTTTCTATAAGTTTTGAATCAAATAATAATACTAACCAATGACGGTAAGCGTTGCATTTGGAATTGATATTGGAATCAAATCTCCTAAAAATACAATTTCAAAAATTTGAATCCCACGTTTGTCTTGTAAACTTGAATGTAAATATGTCATTTTTCCGGTAGGGTTAAAAAAATATACATTCTTTGTTTGTGTAGTTTGATTAAAATAATATTTTTTGGTTCATGAATTTTAGTTTGTAACAATTTAGTTCTACTAGATAAACAACCTCGACCCTTAATATTGTACCTTTTTGGGTTCGCCAATTCTTGGATTGATTTTTTTTTTTTTTCTTGGTAGAGTATACATTTGGGTTTCATGGACTCCAATATCTTATTAGAGAAACATGAAGTTTTATCTCAAACCCAATTGATAATAGAAGGAATAGTTCGTATATCTTTAAAAGACACGTTTCTCTCATGATTTTTGTTTTTGACAATATGAAATTTATACAAACATATACATACATACATATTATTCACTAAACCAACCACGGCCAAATGTGTTCATAAACTAAAAAAAAATTAGTGCATTATCTAATATAAATCTGACATTAGCTTAGATGAGATTTTCTAAGGAGTATAGATCAAAGTTAAACTACATATAGAAATTAAATCGTCACTCATTTAATATACCATGTTCAAGTTTTTAAAAATTAAAATTTTAGAGATTAAATGTTAAAGTGAGTTTAGCTCAATGGTAATTGATATAACTTTTTCTAAAAGTCGAACGTTCGATCTTGACTAGGTCAATTATCTAGTCAACGTGAAATTTTGATATAACAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATAAATAAAATCTAGGTAGCTGCATTTATGTTTTCATTGCTCGCTGTGGCTACACCATAAGAATTGGAATGGACTATAAAAAAGGTTAAAATTGAAGATGCACCCAAAGTAATTCTGTATAAATAAAAGGGACTAAACAAAGAAAGTTATCCTGAGGAAGGATAAAAAAATGGAGTGTTTTGTGAAGTTGGGATTCAATTTTAGATTCCCAGCGAAGGAAAAGAGAATCCAACGCTATAAATCTTTACAACTTCCATTAAAGAAATGAAAGTAAGACAAACAAAACATCAAATCATTGATGAGTATTGCCCTGCATGATGTGTAATACCCAGTTTTTAATTAACGTGATTATTCGTTCATCAGTATATTCCACGGCCAATCGGCATGTTCACACCACACTTTTAGATTTTCTTATATATATATTTTCATATTTCCAACTAAATCCATATTACTATTCTATCATACATAAAAATTGATGAAACATAAAATGTCACTAATCGATAAAGAGTTGATGTATTCAAAAATCATAAAATGGTAGTTGCAAATAGCGTTTCGATTGTAAGAGTCTATTTTTGATAAAATTTGCAAATTTTTTAAAATGTTATACACTTTTTTATTATACCTAAAAGTAGTACCAAACACAATCACCTTGTAGATACATATATTTATAATGGTTTTATAATTTTTCAAAAATATTCATCCATGTTATTATTTCTATCGACATTTTCGTAAAATTTAGAGTTAGATGTTTTTGTCGACAATGACATTTTAAAACCTTCACCCGCACAGTTGTTTAATTCACGTATATATAAATAATCATACAGAATGACAAATGTAACACTAATGGCGCCATATACAATTAAAAAGAATCCATAGGCGGCTGAATTTGGGGTTCTTTATATATAAAAAGGCAAACAATTGGTGACTTGGATTCAAATCACTTGAAAAGAAACAAGTCTCTTCTTCTTCATTATGGCAAATTTTGGATTGCAGCTGTTTTTTGTTATTCTATCGGTTATTTCTCTTTCTCACCTTTGTGGAGCAATCTCTTCTTGTAATGGGCCATGCCACACCCTAAACGATTGTCAAGGTCAATTGATTTGCATAAACGGAATATGCGAGGATGATCCTAACCTTGGCACACACATATGTTCCAGTGGCGGAGGAGGGTCAGGTTCGCCGCCATCTTCCGGCAAGGGTTGCCATTCAATTGGAAACTTGAACTGCAAGGGAAAATCCTTTCCCCAATTCAAGTGTTCGCCTCCAGTGACTTCTTCTACTCGAGCTGTGCTTACAAATAACGATTTTAGCAAAGGTGGGAGTGGAGGGGACCCGTCGGAGTGCGACGGCAAATTCCATCATAACTCTGAACCAATAGTGGCGTTGTCCACCGGTTGGTACAATGGGGGATCCAGATGTGGGAAGATGATTCAGATTACAGCTACAAATGGAAGGTCGGTATTGGCTAAGGTGGTGGATGAGTGTGATTCTGTGAATGGATGTGACAAAGAACATGCCCATTTGCCTCCGTGTCAGAACAATATTGTGGATGGCTCAGATGCAATATGGCATGCTTTGGGACTTGATATAGATATAGGTGAAGAACCTGTTACTTGGTCTGATGCTTAG ATGAATAATATATCCGCTAGTGTTAGTGAACCTGTACCTACTCTAATCATACCAATTTTTTTAAAAAAAGAAATGGAAAAACTGTTTTTTGTTATTCTATCGGTTATTTCTCTTTCTCACCTTTGTGGAGCAATCTCTTCTTGTAATGGGCCATGCCACACCCTAAACGATTGTCAAGGTCAATTGATTTGCATAAACGGAATATGCGAGGATGATCCTAACCTTGGCACACACATATGTTCCAGTGGCGGAGGAGGGTCAGGTTCGCCGCCATCTTCCGGCAAGGGTTGCCATTCAATTGGAAACTTGAACTGCAAGGGAAAATCCTTTCCCCAATTCAAGTGTTCGCCTCCAGTGACTTCTTCTACTCGAGCTGTGCTTACAAATAACGATTTTAGCAAAGGTGGGAGTGGAGGGGACCCGTCGGAGTGCGACGGCAAATTCCATCATAACTCTGAACCAATAGTGGCGTTGTCCACCGGTTGGTACAATGGGGGATCCAGATGTGGGAAGATGATTCAGATTACAGCTACAAATGGAAGGTCGGTATTGGCTAAGGTGGTGGATGAGTGTGATTCTGTGAATGGATGTGACAAAGAACATGCCCATTTGCCTCCGTGTCAGAACAATATTGTGGATGGCTCAGATGCAATATGGCATGCTTTGGGACTTGATATAGATATAGGTGAAGAACCTGTTACTTGGTCTGATGCTTAG ATGAATAATATATCCGCTAGTGTTAGTGAACCTGTACCTACTCTAATCATACCAATTTTTTTAAAAAAAGAAATGGAAAAACTGTTTTTTGTTATTCTATCGGTTATTTCTCTTTCTCACCTTTGTGGAGCAATCTCTTCTTGTAATGGGCCATGCCACACCCTAAACGATTGTCAAGGTCAATTGATTTGCATAAACGGAATATGCGAGGATGATCCTAACCTTGGCACACACATATGTTCCAGTGGCGGAGGAGGGTCAGGTTCGCCGCCATCTTCCGGCAAGGGTTGCCATTCAATTGGAAACTTGAACTGCAAGGGAAAATCCTTTCCCCAATTCAAGTGTTCGCCTCCAGTGACTTCTTCTACTCGAGCTGTGCTTACAAATAACGATTTTAGCAAAGGTGGGAGTGGAGGGGACCCGTCGGAGTGCGACGGCAAATTCCATCATAACTCTGAACCAATAGTGGCGTTGTCCACCGGTTGGTACAATGGGGGATCCAGATGTGGGAAGATGATTCAGATTACAGCTACAAATGGAAGGTCGGTATTGGCTAAGGTGGTGGATGAGTGTGATTCTGTGAATGGATGTGACAAAGAACATGCCCATTTGCCTCCGTGTCAGAACAATATTGTGGATGGCTCAGATGCAATATGGCATGCTTTGGGACTTGATATAGATATAGGTGAAGAACCTGTTACTTGGTCTGATGCTTAG MNNISASVSEPVPTLIIPIFLKKEMEKLFFVILSVISLSHLCGAISSCNGPCHTLNDCQGQLICINGICEDDPNLGTHICSSGGGGSGSPPSSGKGCHSIGNLNCKGKSFPQFKCSPPVTSSTRAVLTNNDFSKGGSGGDPSECDGKFHHNSEPIVALSTGWYNGGSRCGKMIQITATNGRSVLAKVVDECDSVNGCDKEHAHLPPCQNNIVDGSDAIWHALGLDIDIGEEPVTWSDA Homology
BLAST of Clc02G22580 vs. NCBI nr
Match: XP_038902873.1 (kiwellin-like [Benincasa hispida]) HSP 1 Score: 415.6 bits (1067), Expect = 2.9e-112 Identity = 194/212 (91.51%), Postives = 202/212 (95.28%), Query Frame = 0
BLAST of Clc02G22580 vs. NCBI nr
Match: XP_008465373.1 (PREDICTED: kiwellin-like [Cucumis melo] >KAA0035246.1 kiwellin-like [Cucumis melo var. makuwa] >TYK22401.1 kiwellin-like [Cucumis melo var. makuwa]) HSP 1 Score: 386.3 bits (991), Expect = 1.9e-103 Identity = 182/212 (85.85%), Postives = 191/212 (90.09%), Query Frame = 0
BLAST of Clc02G22580 vs. NCBI nr
Match: XP_011657008.2 (kiwellin [Cucumis sativus]) HSP 1 Score: 382.9 bits (982), Expect = 2.0e-102 Identity = 180/212 (84.91%), Postives = 189/212 (89.15%), Query Frame = 0
BLAST of Clc02G22580 vs. NCBI nr
Match: XP_023512884.1 (kiwellin-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 367.9 bits (943), Expect = 6.8e-98 Identity = 173/209 (82.78%), Postives = 185/209 (88.52%), Query Frame = 0
BLAST of Clc02G22580 vs. NCBI nr
Match: XP_022944086.1 (kiwellin-like [Cucurbita moschata]) HSP 1 Score: 367.5 bits (942), Expect = 8.9e-98 Identity = 177/211 (83.89%), Postives = 186/211 (88.15%), Query Frame = 0
BLAST of Clc02G22580 vs. ExPASy Swiss-Prot
Match: Q9M4H4 (Ripening-related protein grip22 OS=Vitis vinifera OX=29760 GN=grip22 PE=2 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 3.8e-75 Identity = 139/209 (66.51%), Postives = 158/209 (75.60%), Query Frame = 0
BLAST of Clc02G22580 vs. ExPASy Swiss-Prot
Match: P84527 (Kiwellin OS=Actinidia deliciosa OX=3627 PE=1 SV=2) HSP 1 Score: 282.7 bits (722), Expect = 3.8e-75 Identity = 137/211 (64.93%), Postives = 161/211 (76.30%), Query Frame = 0
BLAST of Clc02G22580 vs. ExPASy Swiss-Prot
Match: P85261 (Kiwellin OS=Actinidia chinensis var. chinensis OX=1590841 GN=KWL1 PE=1 SV=2) HSP 1 Score: 280.4 bits (716), Expect = 1.9e-74 Identity = 136/208 (65.38%), Postives = 158/208 (75.96%), Query Frame = 0
BLAST of Clc02G22580 vs. ExPASy Swiss-Prot
Match: Q6H5X0 (Putative ripening-related protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0637000 PE=3 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 7.4e-47 Identity = 92/150 (61.33%), Postives = 109/150 (72.67%), Query Frame = 0
BLAST of Clc02G22580 vs. ExPASy Swiss-Prot
Match: Q7XVA8 (Putative ripening-related protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0364800 PE=3 SV=2) HSP 1 Score: 184.1 bits (466), Expect = 1.8e-45 Identity = 89/137 (64.96%), Postives = 106/137 (77.37%), Query Frame = 0
BLAST of Clc02G22580 vs. ExPASy TrEMBL
Match: A0A5A7SZ96 (Kiwellin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00250 PE=3 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 9.0e-104 Identity = 182/212 (85.85%), Postives = 191/212 (90.09%), Query Frame = 0
BLAST of Clc02G22580 vs. ExPASy TrEMBL
Match: A0A1S3CNR1 (kiwellin-like OS=Cucumis melo OX=3656 GN=LOC103503006 PE=3 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 9.0e-104 Identity = 182/212 (85.85%), Postives = 191/212 (90.09%), Query Frame = 0
BLAST of Clc02G22580 vs. ExPASy TrEMBL
Match: A0A0A0KBF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G147470 PE=3 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 9.9e-103 Identity = 180/212 (84.91%), Postives = 189/212 (89.15%), Query Frame = 0
BLAST of Clc02G22580 vs. ExPASy TrEMBL
Match: A0A6J1FTG9 (kiwellin-like OS=Cucurbita moschata OX=3662 GN=LOC111448630 PE=3 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 4.3e-98 Identity = 177/211 (83.89%), Postives = 186/211 (88.15%), Query Frame = 0
BLAST of Clc02G22580 vs. ExPASy TrEMBL
Match: A0A6J1CFR6 (kiwellin-like OS=Momordica charantia OX=3673 GN=LOC111011271 PE=3 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 6.2e-97 Identity = 169/211 (80.09%), Postives = 183/211 (86.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (cordophanus) v2
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|