Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATACCAAAAAATTACAAATAAAGCTCAAAGCTTGTTCAACAATGGCTTCCTTACAAGCTTCATCCCTCCTCTCAGCTTCCTCTTCTTCAAGAAGAACAGTTACCCAAGCCGCAATTCACATTCCAAAGCTTCCCAATCTCCGAATCTCAGCTTCCAGACTCCCAAAAACTTCCACCGCCTCCGTTAAAATGATCGAAGAACTCTGTTTAAACAAACCCGTTATTGATGTGATTCCTACAGAATCCCCTTTCAAATCACAGCTCCAAGCCATATTAGACGCCGTAGCCGACCGGGTTGAAATGCATAACAATATCCGCCAACAGCGAGATAATTGGAATTCCCTTTTTCTCAATTCCATCAACATGATCACTCTCACTGCCTCCGCCCTCTCCGCCGCTGCACCCGCCGTCGGTGCCCTCGGAGCTCCTCTTTTTGCTCTGAAGTTGTCATCGGCTCTGCTTTTCTCGGCTGCAACAGGGATGTTGGTGATGGTGAATAAAATTCAACCCTCACAGCTGGCTGAGGAGCAGCGAAATGCGGCTAGATTGTTCAAGGAACTCCAAACCCAAATCCAAAGCTTGATTATGACTGGAACTCCCACTCAAATGGACGTGGATTCCGCCATGGAAAAAGTGTTGGCGCTCGATAAAGCATACCCACTTCCTTTACTTGGTGTAATGCTTGAAAAATTCCCTAAAACTGTGGAGCCGGCTTCTTGGTGGCCCAATTCTTCCAATGATTATGAATCTCAGACCAAGAACGAAAAGACCCATTTTGATGGAAAGCAACGGCAAGGTTCCAATGGGTGGAGCGATCAACTTGAGGCAGAAATGAGAGAGGTTGTTGAAGTCGTAAAGTCAAAAGACGCTGAAGACTATGTCAGGCTTGGGAATTTAGTTTTGAAGGTTAATAAAACTCTGGCGATATCGGGCCCTGTTCTCACCGGCATTGCGGCTTTGAGCTCTGCTTTGGTGGGTGATTGGTCATCGGCGGGGATGGTGGTGGCGGCGGGGGCAGGATCTTTGGCGGCAGCCGTGAATGCGTTAGAGCACGGTGGGCAAATTGGAATGGTGTTTGAGATGTATAGAAACACTGCCGGATTCTTCGGGGTATTGGAAGAATCCATTAGAGGGACGCTTGAGGAGAAAGATTGGGAGAAGAGGGAAAATGGTGAAGTGTTTGAAAGGAAAGTGGCTTTGAAATTGGGAAGAAGCTTATCTCAGCTCAGACAATTGGCTACCAAGTCAGCTGCGGCTAGGGAAGAAGGGATTTCCATGGATGAATTTGCCAGCAAGCTTTTTTGATTTATTTATTTTTTTTTTTCCCCTTTTAAAGTTACAATTCGTTGATTCTTCGAGATGGGAGATGATATGTCCATCCAATCATGTAAAGAAAAAATAACCTTATTGATCAATATATTTAACTACAGTTTTTGTTCAATTTTTCTTTCAAAGTTGGATAAAAATTATGGAGATATCATATTAATTTAGTTAGTTTAAACTATGTATCCTATATCACTTGTATATGTTTGCTTTGACATATATAATCTCTTTGTATAGTAAAATACATGAATCGTCATTTCTATTATATCCTAAAAATATACACATAATAAAAT
mRNA sequence
ATACCAAAAAATTACAAATAAAGCTCAAAGCTTGTTCAACAATGGCTTCCTTACAAGCTTCATCCCTCCTCTCAGCTTCCTCTTCTTCAAGAAGAACAGTTACCCAAGCCGCAATTCACATTCCAAAGCTTCCCAATCTCCGAATCTCAGCTTCCAGACTCCCAAAAACTTCCACCGCCTCCGTTAAAATGATCGAAGAACTCTGTTTAAACAAACCCGTTATTGATGTGATTCCTACAGAATCCCCTTTCAAATCACAGCTCCAAGCCATATTAGACGCCGTAGCCGACCGGGTTGAAATGCATAACAATATCCGCCAACAGCGAGATAATTGGAATTCCCTTTTTCTCAATTCCATCAACATGATCACTCTCACTGCCTCCGCCCTCTCCGCCGCTGCACCCGCCGTCGGTGCCCTCGGAGCTCCTCTTTTTGCTCTGAAGTTGTCATCGGCTCTGCTTTTCTCGGCTGCAACAGGGATGTTGGTGATGGTGAATAAAATTCAACCCTCACAGCTGGCTGAGGAGCAGCGAAATGCGGCTAGATTGTTCAAGGAACTCCAAACCCAAATCCAAAGCTTGATTATGACTGGAACTCCCACTCAAATGGACGTGGATTCCGCCATGGAAAAAGTGTTGGCGCTCGATAAAGCATACCCACTTCCTTTACTTGGTGTAATGCTTGAAAAATTCCCTAAAACTGTGGAGCCGGCTTCTTGGTGGCCCAATTCTTCCAATGATTATGAATCTCAGACCAAGAACGAAAAGACCCATTTTGATGGAAAGCAACGGCAAGGTTCCAATGGGTGGAGCGATCAACTTGAGGCAGAAATGAGAGAGGTTGTTGAAGTCGTAAAGTCAAAAGACGCTGAAGACTATGTCAGGCTTGGGAATTTAGTTTTGAAGGTTAATAAAACTCTGGCGATATCGGGCCCTGTTCTCACCGGCATTGCGGCTTTGAGCTCTGCTTTGGTGGGTGATTGGTCATCGGCGGGGATGGTGGTGGCGGCGGGGGCAGGATCTTTGGCGGCAGCCGTGAATGCGTTAGAGCACGGTGGGCAAATTGGAATGGTGTTTGAGATGTATAGAAACACTGCCGGATTCTTCGGGGTATTGGAAGAATCCATTAGAGGGACGCTTGAGGAGAAAGATTGGGAGAAGAGGGAAAATGGTGAAGTGTTTGAAAGGAAAGTGGCTTTGAAATTGGGAAGAAGCTTATCTCAGCTCAGACAATTGGCTACCAAGTCAGCTGCGGCTAGGGAAGAAGGGATTTCCATGGATGAATTTGCCAGCAAGCTTTTTTGATTTATTTATTTTTTTTTTTCCCCTTTTAAAGTTACAATTCGTTGATTCTTCGAGATGGGAGATGATATGTCCATCCAATCATGTAAAGAAAAAATAACCTTATTGATCAATATATTTAACTACAGTTTTTGTTCAATTTTTCTTTCAAAGTTGGATAAAAATTATGGAGATATCATATTAATTTAGTTAGTTTAAACTATGTATCCTATATCACTTGTATATGTTTGCTTTGACATATATAATCTCTTTGTATAGTAAAATACATGAATCGTCATTTCTATTATATCCTAAAAATATACACATAATAAAAT
Coding sequence (CDS)
ATGGCTTCCTTACAAGCTTCATCCCTCCTCTCAGCTTCCTCTTCTTCAAGAAGAACAGTTACCCAAGCCGCAATTCACATTCCAAAGCTTCCCAATCTCCGAATCTCAGCTTCCAGACTCCCAAAAACTTCCACCGCCTCCGTTAAAATGATCGAAGAACTCTGTTTAAACAAACCCGTTATTGATGTGATTCCTACAGAATCCCCTTTCAAATCACAGCTCCAAGCCATATTAGACGCCGTAGCCGACCGGGTTGAAATGCATAACAATATCCGCCAACAGCGAGATAATTGGAATTCCCTTTTTCTCAATTCCATCAACATGATCACTCTCACTGCCTCCGCCCTCTCCGCCGCTGCACCCGCCGTCGGTGCCCTCGGAGCTCCTCTTTTTGCTCTGAAGTTGTCATCGGCTCTGCTTTTCTCGGCTGCAACAGGGATGTTGGTGATGGTGAATAAAATTCAACCCTCACAGCTGGCTGAGGAGCAGCGAAATGCGGCTAGATTGTTCAAGGAACTCCAAACCCAAATCCAAAGCTTGATTATGACTGGAACTCCCACTCAAATGGACGTGGATTCCGCCATGGAAAAAGTGTTGGCGCTCGATAAAGCATACCCACTTCCTTTACTTGGTGTAATGCTTGAAAAATTCCCTAAAACTGTGGAGCCGGCTTCTTGGTGGCCCAATTCTTCCAATGATTATGAATCTCAGACCAAGAACGAAAAGACCCATTTTGATGGAAAGCAACGGCAAGGTTCCAATGGGTGGAGCGATCAACTTGAGGCAGAAATGAGAGAGGTTGTTGAAGTCGTAAAGTCAAAAGACGCTGAAGACTATGTCAGGCTTGGGAATTTAGTTTTGAAGGTTAATAAAACTCTGGCGATATCGGGCCCTGTTCTCACCGGCATTGCGGCTTTGAGCTCTGCTTTGGTGGGTGATTGGTCATCGGCGGGGATGGTGGTGGCGGCGGGGGCAGGATCTTTGGCGGCAGCCGTGAATGCGTTAGAGCACGGTGGGCAAATTGGAATGGTGTTTGAGATGTATAGAAACACTGCCGGATTCTTCGGGGTATTGGAAGAATCCATTAGAGGGACGCTTGAGGAGAAAGATTGGGAGAAGAGGGAAAATGGTGAAGTGTTTGAAAGGAAAGTGGCTTTGAAATTGGGAAGAAGCTTATCTCAGCTCAGACAATTGGCTACCAAGTCAGCTGCGGCTAGGGAAGAAGGGATTTCCATGGATGAATTTGCCAGCAAGCTTTTTTGA
Protein sequence
MASLQASSLLSASSSSRRTVTQAAIHIPKLPNLRISASRLPKTSTASVKMIEELCLNKPVIDVIPTESPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAAAPAVGALGAPLFALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKELQTQIQSLIMTGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTVEPASWWPNSSNDYESQTKNEKTHFDGKQRQGSNGWSDQLEAEMREVVEVVKSKDAEDYVRLGNLVLKVNKTLAISGPVLTGIAALSSALVGDWSSAGMVVAAGAGSLAAAVNALEHGGQIGMVFEMYRNTAGFFGVLEESIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFASKLF
Homology
BLAST of Clc01G22300 vs. NCBI nr
Match:
XP_038883638.1 (probable F-box protein At4g22030 [Benincasa hispida])
HSP 1 Score: 719.9 bits (1857), Expect = 1.2e-203
Identity = 389/421 (92.40%), Postives = 409/421 (97.15%), Query Frame = 0
Query: 1 MASLQASSLLSASSSSR-RTVTQAAIHIPKLPNLRISASRLPKTSTASVKMIEELCLNKP 60
MASLQASSLL ASSSSR R ++QAAIH+PKLPNLRISASRL KTSTASVKMIEELCLN+P
Sbjct: 1 MASLQASSLLLASSSSRTRRISQAAIHVPKLPNLRISASRLSKTSTASVKMIEELCLNQP 60
Query: 61 VIDVIPTESPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAA 120
+I+VIP+ESPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAA
Sbjct: 61 IINVIPSESPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAA 120
Query: 121 APAVGALGAPLFALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKELQTQIQS 180
APAVGALGAPL ALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFK LQ+QIQS
Sbjct: 121 APAVGALGAPLLALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKLLQSQIQS 180
Query: 181 LIMTGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTVEPASWWPNSSNDYESQTK 240
LIMTG PTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKT+EPASWWPNSSNDYESQTK
Sbjct: 181 LIMTGAPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTLEPASWWPNSSNDYESQTK 240
Query: 241 NEKTHFDGKQRQGSNGWSDQLEAEMREVVEVVKSKDAEDYVRLGNLVLKVNKTLAISGPV 300
+EK HFDGKQR+ SNGWSD+LEAEMREVVE+VK+KDAEDYVRLGNLVLKVNKTLAISGPV
Sbjct: 241 DEKAHFDGKQRRDSNGWSDELEAEMREVVEIVKTKDAEDYVRLGNLVLKVNKTLAISGPV 300
Query: 301 LTGIAALSSALVGDWSSAGMVVAAGAGSLAAAVNALEHGGQIGMVFEMYRNTAGFFGVLE 360
LTG+AALSSA VGDWSSAGMVVAA AGSLAAAVNALEHGGQ+GMVFEMYRN+AGFFG+LE
Sbjct: 301 LTGLAALSSAFVGDWSSAGMVVAAAAGSLAAAVNALEHGGQVGMVFEMYRNSAGFFGLLE 360
Query: 361 ESIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFASKL 420
ESI+GTLEEKDWEKRENG VFERKVALKLGRSLSQLRQLATKSAAAREEGIS+DEFASKL
Sbjct: 361 ESIKGTLEEKDWEKRENGHVFERKVALKLGRSLSQLRQLATKSAAAREEGISIDEFASKL 420
BLAST of Clc01G22300 vs. NCBI nr
Match:
XP_004134976.2 (probable F-box protein At4g22030 [Cucumis sativus])
HSP 1 Score: 690.6 bits (1781), Expect = 8.1e-195
Identity = 370/420 (88.10%), Postives = 397/420 (94.52%), Query Frame = 0
Query: 1 MASLQASSLLSASSSSRRTVTQAAIHIPKLPNLRISASRLPKTSTASVKMIEELCLNKPV 60
MASLQA SL SAS SSR ++T+AAIHIPKLPNL+ISA +LPKTST SVKMIE+LCLN+P+
Sbjct: 1 MASLQALSLFSASPSSRTSITKAAIHIPKLPNLKISAPKLPKTSTPSVKMIEQLCLNQPI 60
Query: 61 IDVIPTESPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAAA 120
I+VIPTESP KSQL+AIL+AVADRVEMHNNIRQQRDNWNSLFLNSINMITLTAS L+A+A
Sbjct: 61 INVIPTESPLKSQLRAILEAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASVLAASA 120
Query: 121 PAVGALGAPLFALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKELQTQIQSL 180
PAVG+LGAPL ALK+SSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFK+LQTQIQSL
Sbjct: 121 PAVGSLGAPLLALKMSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQSL 180
Query: 181 IMTGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTVEPASWWPNSSNDYESQTKN 240
I+ G TQMDVDSAMEKVLALDKAYPLPLLG MLEKFPKTV+PASWWPNSS +YESQ KN
Sbjct: 181 ILDGALTQMDVDSAMEKVLALDKAYPLPLLGAMLEKFPKTVKPASWWPNSSENYESQAKN 240
Query: 241 EKTHFDGKQRQGSNGWSDQLEAEMREVVEVVKSKDAEDYVRLGNLVLKVNKTLAISGPVL 300
+ THFDGKQ + SNGWSD+LEAEMREVVE+VKS DAEDYVRLGNLVLKVNKTLAI+GPVL
Sbjct: 241 KNTHFDGKQGRESNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLVLKVNKTLAITGPVL 300
Query: 301 TGIAALSSALVGDWSSAGMVVAAGAGSLAAAVNALEHGGQIGMVFEMYRNTAGFFGVLEE 360
TGIAALSSA VGDWSS GMVVAA AGSLAAAVN LEHGGQIGMVFEMYRNTAGFFG+LEE
Sbjct: 301 TGIAALSSAFVGDWSSTGMVVAAAAGSLAAAVNTLEHGGQIGMVFEMYRNTAGFFGLLEE 360
Query: 361 SIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFASKLF 420
SIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLA+KSAAAREEGIS+DEFASKLF
Sbjct: 361 SIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLASKSAAAREEGISIDEFASKLF 420
BLAST of Clc01G22300 vs. NCBI nr
Match:
TYK13033.1 (putative F-box protein [Cucumis melo var. makuwa])
HSP 1 Score: 688.0 bits (1774), Expect = 5.3e-194
Identity = 369/420 (87.86%), Postives = 396/420 (94.29%), Query Frame = 0
Query: 1 MASLQASSLLSASSSSRRTVTQAAIHIPKLPNLRISASRLPKTSTASVKMIEELCLNKPV 60
MASL++ SL SAS SS+ + T A+IHIPKLPNLRISA++LPKTSTASVKMIE+LCLN+P+
Sbjct: 1 MASLRSLSLFSASHSSKTSTTNASIHIPKLPNLRISATKLPKTSTASVKMIEQLCLNQPI 60
Query: 61 IDVIPTESPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAAA 120
I+VIPTESP KSQL AIL+AVADRVEMHNNIRQQRDNWNSLFLNSIN+ITLTASAL+A+A
Sbjct: 61 INVIPTESPLKSQLHAILEAVADRVEMHNNIRQQRDNWNSLFLNSINLITLTASALAASA 120
Query: 121 PAVGALGAPLFALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKELQTQIQSL 180
PAVG+LGAPL ALK+SSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFK+LQTQIQSL
Sbjct: 121 PAVGSLGAPLLALKVSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQSL 180
Query: 181 IMTGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTVEPASWWPNSSNDYESQTKN 240
I+ G PTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKT EPASWWPNSS +YESQTKN
Sbjct: 181 ILDGAPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTFEPASWWPNSSENYESQTKN 240
Query: 241 EKTHFDGKQRQGSNGWSDQLEAEMREVVEVVKSKDAEDYVRLGNLVLKVNKTLAISGPVL 300
E T+ D KQ + SNGWSD+LEAEMREV E+VKSKDAEDYVRLGNLVLKVNK LA SGPVL
Sbjct: 241 ENTYLDAKQGRESNGWSDELEAEMREVAEIVKSKDAEDYVRLGNLVLKVNKILATSGPVL 300
Query: 301 TGIAALSSALVGDWSSAGMVVAAGAGSLAAAVNALEHGGQIGMVFEMYRNTAGFFGVLEE 360
+GIAALSSA VGDWSSAGM VAA AGSLAAAVNALEHGGQIGMVFEMYRNTAGFFG+LEE
Sbjct: 301 SGIAALSSAFVGDWSSAGMAVAAAAGSLAAAVNALEHGGQIGMVFEMYRNTAGFFGLLEE 360
Query: 361 SIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFASKLF 420
SIRGTLEEK+WEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFASKLF
Sbjct: 361 SIRGTLEEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFASKLF 420
BLAST of Clc01G22300 vs. NCBI nr
Match:
XP_004134771.3 (probable F-box protein At4g22030 [Cucumis sativus] >KAE8647658.1 hypothetical protein Csa_003076 [Cucumis sativus])
HSP 1 Score: 678.3 bits (1749), Expect = 4.2e-191
Identity = 364/420 (86.67%), Postives = 393/420 (93.57%), Query Frame = 0
Query: 1 MASLQASSLLSASSSSRRTVTQAAIHIPKLPNLRISASRLPKTSTASVKMIEELCLNKPV 60
MASLQ+ L SAS SS+ + T A++HIPKLPNLRISA +LPKTST SVKMIE+LCLN+P+
Sbjct: 1 MASLQSLPLFSASHSSKTSTTNASLHIPKLPNLRISAPKLPKTSTPSVKMIEQLCLNQPI 60
Query: 61 IDVIPTESPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAAA 120
++VIPTESP KSQL AIL+AVADRVEMHNNI QQRDNWNSLFLNSINMITLTASAL+A+A
Sbjct: 61 LNVIPTESPLKSQLHAILEAVADRVEMHNNICQQRDNWNSLFLNSINMITLTASALAASA 120
Query: 121 PAVGALGAPLFALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKELQTQIQSL 180
PAVG+LGAPL ALK+SSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFK+LQTQIQSL
Sbjct: 121 PAVGSLGAPLLALKVSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQSL 180
Query: 181 IMTGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTVEPASWWPNSSNDYESQTKN 240
I+ G PTQ+DVDSAM+KVLA+DKAYPLPLLG MLEKFPKTVEPASWWPNSS +YESQTKN
Sbjct: 181 ILDGAPTQVDVDSAMKKVLAIDKAYPLPLLGAMLEKFPKTVEPASWWPNSSENYESQTKN 240
Query: 241 EKTHFDGKQRQGSNGWSDQLEAEMREVVEVVKSKDAEDYVRLGNLVLKVNKTLAISGPVL 300
THFDGKQ + SNGWS +LEAEMREVVE+VKSKDAEDYVRLGNLVLKVNKTLAI+GPVL
Sbjct: 241 GNTHFDGKQGRDSNGWSVELEAEMREVVEIVKSKDAEDYVRLGNLVLKVNKTLAITGPVL 300
Query: 301 TGIAALSSALVGDWSSAGMVVAAGAGSLAAAVNALEHGGQIGMVFEMYRNTAGFFGVLEE 360
TGIAALSSA VGDWSSAGM VAA AGSLAAAVNALEHGGQIGMVFEMYRN+AGFFG+LEE
Sbjct: 301 TGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLEE 360
Query: 361 SIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFASKLF 420
SIRGTL EK+WEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEG SMDEFASKLF
Sbjct: 361 SIRGTLGEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGFSMDEFASKLF 420
BLAST of Clc01G22300 vs. NCBI nr
Match:
XP_023544014.1 (probable F-box protein At4g22030 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 659.8 bits (1701), Expect = 1.5e-185
Identity = 356/420 (84.76%), Postives = 383/420 (91.19%), Query Frame = 0
Query: 1 MASLQASSLLSASSSSRRTVTQAAIHIPKLPNLRISASRLPKTSTASVKMIEELCLNKPV 60
MASLQAS LL SSR+T+TQA+IH+PKLPNLRIS RLPKTSTAS+K+IEELCLN+P+
Sbjct: 1 MASLQASFLL---PSSRKTITQASIHVPKLPNLRISVPRLPKTSTASLKLIEELCLNQPL 60
Query: 61 IDVIPTESPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAAA 120
+ PT+SP S L AILD VADRVEMHNNI QQRDNWNSLFLNSINMITL AS ++A A
Sbjct: 61 NIIPPTQSPLTSHLHAILDIVADRVEMHNNICQQRDNWNSLFLNSINMITLAASVMAATA 120
Query: 121 PAVGALGAPLFALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKELQTQIQSL 180
PAVGALGAPL LKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFK+LQTQIQ+L
Sbjct: 121 PAVGALGAPLLGLKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQTL 180
Query: 181 IMTGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTVEPASWWPNSSNDYESQTKN 240
I G PTQ DVDSAMEKVLALDKAYPLPLLGVMLEKFPK +EPASWWPNSS+ ES+T+N
Sbjct: 181 ITVGAPTQRDVDSAMEKVLALDKAYPLPLLGVMLEKFPKKLEPASWWPNSSHSDESKTQN 240
Query: 241 EKTHFDGKQRQGSNGWSDQLEAEMREVVEVVKSKDAEDYVRLGNLVLKVNKTLAISGPVL 300
E HFDG QRQGSNGWSDQLEAEMREVVEV+K+KDA+DYVRLGNLVLKVNKTLAISGP+L
Sbjct: 241 ENAHFDGNQRQGSNGWSDQLEAEMREVVEVMKTKDAKDYVRLGNLVLKVNKTLAISGPLL 300
Query: 301 TGIAALSSALVGDWSSAGMVVAAGAGSLAAAVNALEHGGQIGMVFEMYRNTAGFFGVLEE 360
TGIAAL SA VGDWSS GMVVAA AGSLAAAVNALEHGGQIGMVFEMYRN+AGFFGV+EE
Sbjct: 301 TGIAALGSAFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGVMEE 360
Query: 361 SIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFASKLF 420
SIRGTLEE DWEKRENG+VFERKVALKLGRSLSQLRQLA KSAAAR+EGIS+DEFASKLF
Sbjct: 361 SIRGTLEETDWEKRENGQVFERKVALKLGRSLSQLRQLAAKSAAARQEGISIDEFASKLF 417
BLAST of Clc01G22300 vs. ExPASy Swiss-Prot
Match:
O65451 (Probable F-box protein At4g22030 OS=Arabidopsis thaliana OX=3702 GN=At4g22030 PE=4 SV=1)
HSP 1 Score: 346.7 bits (888), Expect = 3.8e-94
Identity = 218/437 (49.89%), Postives = 293/437 (67.05%), Query Frame = 0
Query: 1 MASLQASSLLSASSSSRRTVTQAAIHIPKLPNLRISASRLP-KTSTASVK--------MI 60
MASLQAS + +S S T T++AI IPKLP +S ++P K V+
Sbjct: 1 MASLQASRFMLTTSCSSCTRTRSAISIPKLPKFNVSIPQIPIKNRNFRVEEPILRLDGFA 60
Query: 61 EELCLN-----KPVIDVIPTESPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSI 120
E+L L+ + + +S+L A+L+ V DRVEMH NI +QR+NWNSL LNS+
Sbjct: 61 EDLDLSLSERQRQKKRGCDDQVLQRSRLMAVLEEVIDRVEMHKNIGEQRNNWNSLLLNSV 120
Query: 121 NMITLTASALSAAAPAVGALGA-PLFALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRN 180
NMITLTA AL A ++ A G + A+ ++S +L ++ATG+ ++NKIQPSQL EEQRN
Sbjct: 121 NMITLTA-ALMAGIASMNASGIDSVSAVSIASTVLLASATGLAALMNKIQPSQLVEEQRN 180
Query: 181 AARLFKELQTQIQSLIMTGTP---TQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTVE 240
A RLFK+L+ +I+ ++ + ++ DV A+++VL LDKAYPLPL+G MLEKFP+ +
Sbjct: 181 ATRLFKQLRNRIEMVLREKSEDGISEEDVKEAIKRVLCLDKAYPLPLVGTMLEKFPQEFK 240
Query: 241 PASWWPNSSNDYESQTKNEKTHFDGKQRQGSNGWSDQLEAEMREVVEVVKSKDAEDYVRL 300
PA+WWP +TK E TH R +NGW+ +LE EMREVVEV+KS+DAE+Y +L
Sbjct: 241 PATWWP--------ETKPEPTH----SRTEANGWNSELEMEMREVVEVIKSRDAEEYEKL 300
Query: 301 GNLVLKVNKTLAISGPVLTGIAALSSALVGDWSSAGMVVAAGAGSLAAAVNALEHGGQIG 360
GN+ LK+N+ LAISGPVLTGIAA+SS +G S VVA SLAA VN LEHGGQ+G
Sbjct: 301 GNVALKLNRVLAISGPVLTGIAAVSSGFIGHGSGLAGVVATTCASLAAVVNTLEHGGQVG 360
Query: 361 MVFEMYRNTAGFFGVLEESIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKS 420
MV EMYRN+AGFF ++E++I+ E+RENG+VFE KVALKLGRSLS+LR LA +S
Sbjct: 361 MVVEMYRNSAGFFSLMEDTIK-------TERRENGQVFETKVALKLGRSLSELRDLARRS 417
BLAST of Clc01G22300 vs. ExPASy TrEMBL
Match:
A0A0A0KN03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513600 PE=4 SV=1)
HSP 1 Score: 690.6 bits (1781), Expect = 3.9e-195
Identity = 370/420 (88.10%), Postives = 397/420 (94.52%), Query Frame = 0
Query: 1 MASLQASSLLSASSSSRRTVTQAAIHIPKLPNLRISASRLPKTSTASVKMIEELCLNKPV 60
MASLQA SL SAS SSR ++T+AAIHIPKLPNL+ISA +LPKTST SVKMIE+LCLN+P+
Sbjct: 1 MASLQALSLFSASPSSRTSITKAAIHIPKLPNLKISAPKLPKTSTPSVKMIEQLCLNQPI 60
Query: 61 IDVIPTESPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAAA 120
I+VIPTESP KSQL+AIL+AVADRVEMHNNIRQQRDNWNSLFLNSINMITLTAS L+A+A
Sbjct: 61 INVIPTESPLKSQLRAILEAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASVLAASA 120
Query: 121 PAVGALGAPLFALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKELQTQIQSL 180
PAVG+LGAPL ALK+SSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFK+LQTQIQSL
Sbjct: 121 PAVGSLGAPLLALKMSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQSL 180
Query: 181 IMTGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTVEPASWWPNSSNDYESQTKN 240
I+ G TQMDVDSAMEKVLALDKAYPLPLLG MLEKFPKTV+PASWWPNSS +YESQ KN
Sbjct: 181 ILDGALTQMDVDSAMEKVLALDKAYPLPLLGAMLEKFPKTVKPASWWPNSSENYESQAKN 240
Query: 241 EKTHFDGKQRQGSNGWSDQLEAEMREVVEVVKSKDAEDYVRLGNLVLKVNKTLAISGPVL 300
+ THFDGKQ + SNGWSD+LEAEMREVVE+VKS DAEDYVRLGNLVLKVNKTLAI+GPVL
Sbjct: 241 KNTHFDGKQGRESNGWSDELEAEMREVVEIVKSNDAEDYVRLGNLVLKVNKTLAITGPVL 300
Query: 301 TGIAALSSALVGDWSSAGMVVAAGAGSLAAAVNALEHGGQIGMVFEMYRNTAGFFGVLEE 360
TGIAALSSA VGDWSS GMVVAA AGSLAAAVN LEHGGQIGMVFEMYRNTAGFFG+LEE
Sbjct: 301 TGIAALSSAFVGDWSSTGMVVAAAAGSLAAAVNTLEHGGQIGMVFEMYRNTAGFFGLLEE 360
Query: 361 SIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFASKLF 420
SIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLA+KSAAAREEGIS+DEFASKLF
Sbjct: 361 SIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLASKSAAAREEGISIDEFASKLF 420
BLAST of Clc01G22300 vs. ExPASy TrEMBL
Match:
A0A5D3CM83 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006350 PE=4 SV=1)
HSP 1 Score: 688.0 bits (1774), Expect = 2.5e-194
Identity = 369/420 (87.86%), Postives = 396/420 (94.29%), Query Frame = 0
Query: 1 MASLQASSLLSASSSSRRTVTQAAIHIPKLPNLRISASRLPKTSTASVKMIEELCLNKPV 60
MASL++ SL SAS SS+ + T A+IHIPKLPNLRISA++LPKTSTASVKMIE+LCLN+P+
Sbjct: 1 MASLRSLSLFSASHSSKTSTTNASIHIPKLPNLRISATKLPKTSTASVKMIEQLCLNQPI 60
Query: 61 IDVIPTESPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAAA 120
I+VIPTESP KSQL AIL+AVADRVEMHNNIRQQRDNWNSLFLNSIN+ITLTASAL+A+A
Sbjct: 61 INVIPTESPLKSQLHAILEAVADRVEMHNNIRQQRDNWNSLFLNSINLITLTASALAASA 120
Query: 121 PAVGALGAPLFALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKELQTQIQSL 180
PAVG+LGAPL ALK+SSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFK+LQTQIQSL
Sbjct: 121 PAVGSLGAPLLALKVSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQSL 180
Query: 181 IMTGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTVEPASWWPNSSNDYESQTKN 240
I+ G PTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKT EPASWWPNSS +YESQTKN
Sbjct: 181 ILDGAPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTFEPASWWPNSSENYESQTKN 240
Query: 241 EKTHFDGKQRQGSNGWSDQLEAEMREVVEVVKSKDAEDYVRLGNLVLKVNKTLAISGPVL 300
E T+ D KQ + SNGWSD+LEAEMREV E+VKSKDAEDYVRLGNLVLKVNK LA SGPVL
Sbjct: 241 ENTYLDAKQGRESNGWSDELEAEMREVAEIVKSKDAEDYVRLGNLVLKVNKILATSGPVL 300
Query: 301 TGIAALSSALVGDWSSAGMVVAAGAGSLAAAVNALEHGGQIGMVFEMYRNTAGFFGVLEE 360
+GIAALSSA VGDWSSAGM VAA AGSLAAAVNALEHGGQIGMVFEMYRNTAGFFG+LEE
Sbjct: 301 SGIAALSSAFVGDWSSAGMAVAAAAGSLAAAVNALEHGGQIGMVFEMYRNTAGFFGLLEE 360
Query: 361 SIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFASKLF 420
SIRGTLEEK+WEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFASKLF
Sbjct: 361 SIRGTLEEKEWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFASKLF 420
BLAST of Clc01G22300 vs. ExPASy TrEMBL
Match:
A0A0A0KL68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513610 PE=4 SV=1)
HSP 1 Score: 678.3 bits (1749), Expect = 2.0e-191
Identity = 363/420 (86.43%), Postives = 392/420 (93.33%), Query Frame = 0
Query: 1 MASLQASSLLSASSSSRRTVTQAAIHIPKLPNLRISASRLPKTSTASVKMIEELCLNKPV 60
MASLQ+ L SAS SS+ + T A++HIPKLPNLRISA +LPKTST SVKMIE+LCLN+P+
Sbjct: 1 MASLQSLPLFSASHSSKTSTTNASLHIPKLPNLRISAPKLPKTSTPSVKMIEQLCLNQPI 60
Query: 61 IDVIPTESPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAAA 120
++VIPTESP KSQL AIL+AVADRVEMHNNIRQQRDNWNSLFLNSINMITLTAS L+A+A
Sbjct: 61 LNVIPTESPLKSQLHAILEAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASVLAASA 120
Query: 121 PAVGALGAPLFALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKELQTQIQSL 180
PAVG+LGAPL ALK+SSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFK+LQTQIQSL
Sbjct: 121 PAVGSLGAPLLALKVSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQSL 180
Query: 181 IMTGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTVEPASWWPNSSNDYESQTKN 240
I+ G PTQ+DVDSAM+KVLA+DKAYPLPLLG MLEKFPKTVEPASWWPNSS +YESQTKN
Sbjct: 181 ILDGAPTQVDVDSAMKKVLAIDKAYPLPLLGAMLEKFPKTVEPASWWPNSSENYESQTKN 240
Query: 241 EKTHFDGKQRQGSNGWSDQLEAEMREVVEVVKSKDAEDYVRLGNLVLKVNKTLAISGPVL 300
THFDGKQ + SNGWS +LEAEMREVVE+VKSKDAEDYVRLGNLVLKVNKTLAI+GPVL
Sbjct: 241 GNTHFDGKQGRDSNGWSVELEAEMREVVEIVKSKDAEDYVRLGNLVLKVNKTLAITGPVL 300
Query: 301 TGIAALSSALVGDWSSAGMVVAAGAGSLAAAVNALEHGGQIGMVFEMYRNTAGFFGVLEE 360
TGIAALSSA VGDWSSAGM VAA AGSLAAAVNALEHGGQIGMVFEMYRN+AGFFG+LEE
Sbjct: 301 TGIAALSSAFVGDWSSAGMAVAAVAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGLLEE 360
Query: 361 SIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFASKLF 420
SIRGTL EK+WEKRENGEVFERKVALK GRSLSQLRQLATKSAAAREEG SMDEFASKLF
Sbjct: 361 SIRGTLGEKEWEKRENGEVFERKVALKFGRSLSQLRQLATKSAAAREEGFSMDEFASKLF 420
BLAST of Clc01G22300 vs. ExPASy TrEMBL
Match:
A0A6J1IPN6 (probable F-box protein At4g22030 OS=Cucurbita maxima OX=3661 GN=LOC111477679 PE=4 SV=1)
HSP 1 Score: 657.9 bits (1696), Expect = 2.8e-185
Identity = 354/420 (84.29%), Postives = 383/420 (91.19%), Query Frame = 0
Query: 1 MASLQASSLLSASSSSRRTVTQAAIHIPKLPNLRISASRLPKTSTASVKMIEELCLNKPV 60
MASLQAS LL SSR+T+TQA+IH+PKLPNLRIS RLPKTSTAS+K+IE+LCLN+P+
Sbjct: 1 MASLQASFLL---PSSRKTITQASIHVPKLPNLRISVPRLPKTSTASLKLIEDLCLNQPL 60
Query: 61 IDVIPTESPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAAA 120
+ PT+SP S L AILD VADRVEMHNNI QQRDNWNSL LNSINMITL AS ++A A
Sbjct: 61 NIIPPTQSPLTSHLHAILDIVADRVEMHNNICQQRDNWNSLLLNSINMITLAASVMAATA 120
Query: 121 PAVGALGAPLFALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKELQTQIQSL 180
PAVGALGAPL A KLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFK+LQTQIQ+L
Sbjct: 121 PAVGALGAPLLAFKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQTL 180
Query: 181 IMTGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTVEPASWWPNSSNDYESQTKN 240
I G PTQ DVDSAMEKVLALDKAYPLPLLGVMLEKFPK +EPASWWPNSS+ ES+T+N
Sbjct: 181 ITVGAPTQRDVDSAMEKVLALDKAYPLPLLGVMLEKFPKKLEPASWWPNSSHSDESKTEN 240
Query: 241 EKTHFDGKQRQGSNGWSDQLEAEMREVVEVVKSKDAEDYVRLGNLVLKVNKTLAISGPVL 300
E +HFDG QRQGSNGWSDQLEAEMREVVEVVK+KDA+DYVRLGN+VLKVNKTLAISGP+L
Sbjct: 241 ENSHFDGNQRQGSNGWSDQLEAEMREVVEVVKTKDAQDYVRLGNIVLKVNKTLAISGPLL 300
Query: 301 TGIAALSSALVGDWSSAGMVVAAGAGSLAAAVNALEHGGQIGMVFEMYRNTAGFFGVLEE 360
TGIAAL SA VGDWSS GMVVAA AGSLAAAVNALEHGGQIGMVFEMYRN+AGFFGV+EE
Sbjct: 301 TGIAALGSAFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGVMEE 360
Query: 361 SIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFASKLF 420
SIRGTLEE DWEKRENG+VFERKVALKLGRSLSQLRQLA KS+AAR+EGISMDEFASKLF
Sbjct: 361 SIRGTLEETDWEKRENGQVFERKVALKLGRSLSQLRQLAAKSSAARQEGISMDEFASKLF 417
BLAST of Clc01G22300 vs. ExPASy TrEMBL
Match:
A0A6J1GFH9 (probable F-box protein At4g22030 OS=Cucurbita moschata OX=3662 GN=LOC111453472 PE=4 SV=1)
HSP 1 Score: 649.0 bits (1673), Expect = 1.3e-182
Identity = 350/420 (83.33%), Postives = 380/420 (90.48%), Query Frame = 0
Query: 1 MASLQASSLLSASSSSRRTVTQAAIHIPKLPNLRISASRLPKTSTASVKMIEELCLNKPV 60
MASLQ S LL SSR+T+TQA+IH+PKLP+LR+S RLPKTSTAS+K+IEELCLN+P+
Sbjct: 1 MASLQPSFLL---PSSRKTITQASIHVPKLPSLRVSVPRLPKTSTASLKLIEELCLNQPL 60
Query: 61 IDVIPTESPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSAAA 120
V PT+SP S L AILD VADRVEMHNNI QQRDNWNSLFLNSINMITL AS ++A A
Sbjct: 61 NIVPPTQSPLTSHLHAILDIVADRVEMHNNICQQRDNWNSLFLNSINMITLAASVMAATA 120
Query: 121 PAVGALGAPLFALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKELQTQIQSL 180
PAVGALGAPL ALK SSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFK+LQTQIQ+L
Sbjct: 121 PAVGALGAPLLALKFSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQTL 180
Query: 181 IMTGTPTQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTVEPASWWPNSSNDYESQTKN 240
I G PTQ DVDSAMEKVLALD+AYPLPLLGVMLEKFPK +EPASWWPNSS+ ES+T+N
Sbjct: 181 ITVGAPTQRDVDSAMEKVLALDRAYPLPLLGVMLEKFPKKLEPASWWPNSSHSDESKTEN 240
Query: 241 EKTHFDGKQRQGSNGWSDQLEAEMREVVEVVKSKDAEDYVRLGNLVLKVNKTLAISGPVL 300
E HFDG QRQGSNGWSDQLEAEMREVVEV+K+KDA DY RLGNLVLKV+K+LAISGP+L
Sbjct: 241 ENAHFDGNQRQGSNGWSDQLEAEMREVVEVMKTKDARDYARLGNLVLKVHKSLAISGPLL 300
Query: 301 TGIAALSSALVGDWSSAGMVVAAGAGSLAAAVNALEHGGQIGMVFEMYRNTAGFFGVLEE 360
TGIAAL SA VGDWSS GMVVAA AGSLAAA+NALEHGGQIGMVFEMYRN+AGFFGV+EE
Sbjct: 301 TGIAALGSAFVGDWSSGGMVVAAAAGSLAAAMNALEHGGQIGMVFEMYRNSAGFFGVMEE 360
Query: 361 SIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFASKLF 420
SIRGTLEE +WEKRENGEVFERKVALKLGRSLSQLRQLA KSAAAR+EGISMDEFASKLF
Sbjct: 361 SIRGTLEETNWEKRENGEVFERKVALKLGRSLSQLRQLAAKSAAARQEGISMDEFASKLF 417
BLAST of Clc01G22300 vs. TAIR 10
Match:
AT4G04480.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT4G22030.1); Has 78 Blast hits to 78 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 355.9 bits (912), Expect = 4.4e-98
Identity = 215/423 (50.83%), Postives = 293/423 (69.27%), Query Frame = 0
Query: 1 MASLQASSLLSASSSSRRTVTQAAIHIPKLPNLRISASRLPKTST--ASVKMIEELCLNK 60
MASLQ S L+ +SSSS T +AA+ IPKLP +S ++P S S + +E L L+
Sbjct: 1 MASLQVSRLVLSSSSS-STRPKAAVSIPKLPKFHVSVPKIPTLSVKEPSFEFVESLPLS- 60
Query: 61 PVIDVIPTESPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSINMITLTASALSA 120
+ ++S +++L A+L+ V DR+EMH NI QR+NWNSL LNS+NMITLTA+ ++
Sbjct: 61 -LKQKRGSDSIQRTRLNAVLEEVMDRIEMHKNIGDQRNNWNSLLLNSVNMITLTAALMAG 120
Query: 121 AAPAVGALGAPLFALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKELQTQIQ 180
A G + A+K++S +L ++ATG +++KIQPSQLAEEQRNA RLFK+L+ +I+
Sbjct: 121 IASVNGHGVDSVTAVKIASTVLLTSATGFAALMSKIQPSQLAEEQRNATRLFKKLRVEIE 180
Query: 181 SLIMTGTP-TQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTVEPASWWPNSSNDYESQ 240
+ + DV +++VL+LDKAYPLPL+G MLEKFP+ +PA+WWP E++
Sbjct: 181 MFLRENEEIEEEDVKEVIKRVLSLDKAYPLPLIGTMLEKFPEEFKPATWWP------ENK 240
Query: 241 TKNEKTHFDGKQRQGSNGWSDQLEAEMREVVEVVKSKDAEDYVRLGNLVLKVNKTLAISG 300
KN KT +NGWS +LEAEMREV VVKS+DAE+Y +LG++ LK+N+ LAISG
Sbjct: 241 EKNPKTSL-------ANGWSQELEAEMREVAHVVKSRDAEEYEKLGHVALKLNRFLAISG 300
Query: 301 PVLTGIAALSSALVGDWSSAGMVVAAGAGSLAAAVNALEHGGQIGMVFEMYRNTAGFFGV 360
PVLTG++A+SS +G S +VA SLAA VN LEHGGQ+GMVFEMYRN+AGFF +
Sbjct: 301 PVLTGVSAVSSVFIGQDSGLAGIVAMTCASLAAVVNTLEHGGQVGMVFEMYRNSAGFFSL 360
Query: 361 LEESIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKSAAAREEGISMDEFAS 420
LEE+++ T EKRENG+VFE +VA+KLGRSLS+LR LA +S ++ + EFAS
Sbjct: 361 LEETMKST------EKRENGQVFETRVAVKLGRSLSELRDLAKRSNLSQ---VKAKEFAS 398
BLAST of Clc01G22300 vs. TAIR 10
Match:
AT4G22030.1 (F-box family protein with a domain of unknown function (DUF295) )
HSP 1 Score: 346.7 bits (888), Expect = 2.7e-95
Identity = 218/437 (49.89%), Postives = 293/437 (67.05%), Query Frame = 0
Query: 1 MASLQASSLLSASSSSRRTVTQAAIHIPKLPNLRISASRLP-KTSTASVK--------MI 60
MASLQAS + +S S T T++AI IPKLP +S ++P K V+
Sbjct: 1 MASLQASRFMLTTSCSSCTRTRSAISIPKLPKFNVSIPQIPIKNRNFRVEEPILRLDGFA 60
Query: 61 EELCLN-----KPVIDVIPTESPFKSQLQAILDAVADRVEMHNNIRQQRDNWNSLFLNSI 120
E+L L+ + + +S+L A+L+ V DRVEMH NI +QR+NWNSL LNS+
Sbjct: 61 EDLDLSLSERQRQKKRGCDDQVLQRSRLMAVLEEVIDRVEMHKNIGEQRNNWNSLLLNSV 120
Query: 121 NMITLTASALSAAAPAVGALGA-PLFALKLSSALLFSAATGMLVMVNKIQPSQLAEEQRN 180
NMITLTA AL A ++ A G + A+ ++S +L ++ATG+ ++NKIQPSQL EEQRN
Sbjct: 121 NMITLTA-ALMAGIASMNASGIDSVSAVSIASTVLLASATGLAALMNKIQPSQLVEEQRN 180
Query: 181 AARLFKELQTQIQSLIMTGTP---TQMDVDSAMEKVLALDKAYPLPLLGVMLEKFPKTVE 240
A RLFK+L+ +I+ ++ + ++ DV A+++VL LDKAYPLPL+G MLEKFP+ +
Sbjct: 181 ATRLFKQLRNRIEMVLREKSEDGISEEDVKEAIKRVLCLDKAYPLPLVGTMLEKFPQEFK 240
Query: 241 PASWWPNSSNDYESQTKNEKTHFDGKQRQGSNGWSDQLEAEMREVVEVVKSKDAEDYVRL 300
PA+WWP +TK E TH R +NGW+ +LE EMREVVEV+KS+DAE+Y +L
Sbjct: 241 PATWWP--------ETKPEPTH----SRTEANGWNSELEMEMREVVEVIKSRDAEEYEKL 300
Query: 301 GNLVLKVNKTLAISGPVLTGIAALSSALVGDWSSAGMVVAAGAGSLAAAVNALEHGGQIG 360
GN+ LK+N+ LAISGPVLTGIAA+SS +G S VVA SLAA VN LEHGGQ+G
Sbjct: 301 GNVALKLNRVLAISGPVLTGIAAVSSGFIGHGSGLAGVVATTCASLAAVVNTLEHGGQVG 360
Query: 361 MVFEMYRNTAGFFGVLEESIRGTLEEKDWEKRENGEVFERKVALKLGRSLSQLRQLATKS 420
MV EMYRN+AGFF ++E++I+ E+RENG+VFE KVALKLGRSLS+LR LA +S
Sbjct: 361 MVVEMYRNSAGFFSLMEDTIK-------TERRENGQVFETKVALKLGRSLSELRDLARRS 417
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038883638.1 | 1.2e-203 | 92.40 | probable F-box protein At4g22030 [Benincasa hispida] | [more] |
XP_004134976.2 | 8.1e-195 | 88.10 | probable F-box protein At4g22030 [Cucumis sativus] | [more] |
TYK13033.1 | 5.3e-194 | 87.86 | putative F-box protein [Cucumis melo var. makuwa] | [more] |
XP_004134771.3 | 4.2e-191 | 86.67 | probable F-box protein At4g22030 [Cucumis sativus] >KAE8647658.1 hypothetical pr... | [more] |
XP_023544014.1 | 1.5e-185 | 84.76 | probable F-box protein At4g22030 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
O65451 | 3.8e-94 | 49.89 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana OX=3702 GN=At4g22030 PE... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KN03 | 3.9e-195 | 88.10 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513600 PE=4 SV=1 | [more] |
A0A5D3CM83 | 2.5e-194 | 87.86 | Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... | [more] |
A0A0A0KL68 | 2.0e-191 | 86.43 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513610 PE=4 SV=1 | [more] |
A0A6J1IPN6 | 2.8e-185 | 84.29 | probable F-box protein At4g22030 OS=Cucurbita maxima OX=3661 GN=LOC111477679 PE=... | [more] |
A0A6J1GFH9 | 1.3e-182 | 83.33 | probable F-box protein At4g22030 OS=Cucurbita moschata OX=3662 GN=LOC111453472 P... | [more] |
Match Name | E-value | Identity | Description | |
AT4G04480.1 | 4.4e-98 | 50.83 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: flower, pollen tube; EXP... | [more] |
AT4G22030.1 | 2.7e-95 | 49.89 | F-box family protein with a domain of unknown function (DUF295) | [more] |